id
stringlengths
1
5
tokens
sequence
ner_tags
sequence
11101
[ "However", ",", "the", "major", "problem", "still", "remains", "the", "high", "incidence", "of", "leukemic", "relapse", "following", "autologous", "PBSCT", ",", "which", "may", "be", "caused", "by", "the", "reinfusion", "of", "PBSC", "contaminated", "by", "leukemic", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 7, 8, 0 ]
11102
[ "Recently", ",", "we", "have", "developed", "a", "quantitative", "assay", "using", "competitive", "reverse", "transcriptase", "polymerase", "chain", "reaction", "that", "estimates", "the", "number", "of", "AML1/ETO", "transcripts", "in", "t", "(", "8", ";", "21", ")", "acute", "myelogenous", "leukemia", "(", "AML", ")", ",", "in", "order", "to", "determine", "the", "degree", "of", "leukemic", "cell", "contamination", "in", "PBSC", "harvests", ",", "and", "to", "monitor", "minimal", "residual", "disease", "(", "MRD", ")", "quantitatively", "in", "patients", "with", "t", "(", "8", ";", "21", ")", "AML", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 3, 4, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11103
[ "Our", "data", "indicate", "that", "although", "PBSC", "harvests", "collected", "after", "consolidation", "chemotherapy", "are", "contaminated", "by", "leukemic", "cells", ",", "the", "degree", "of", "leukemic", "cell", "contamination", "decreases", "with", "repeated", "cycles", "of", "chemotherapy", "." ]
[ 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0 ]
11104
[ "Furthermore", ",", "the", "MRD", "in", "PBSC", "harvests", "is", "less", "than", "in", "the", "corresponding", "bone", "marrow", "obtained", "on", "the", "day", "of", "the", "PBSC", "collection", "." ]
[ 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0 ]
11105
[ "There", "appears", "to", "be", "no", "relationship", "between", "the", "number", "of", "AML1/ETO", "transcripts", "found", "in", "the", "infused", "PBSC", "harvests", "and", "the", "incidence", "of", "leukemic", "relapse", "following", "autologous", "PBSCT", "in", "our", "study", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 3, 4, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11106
[ "However", ",", "a", "substantial", "decrease", "of", "AML1/ETO", "transcripts", "was", "seen", "following", "autologous", "PBSCT", "." ]
[ 0, 0, 0, 0, 0, 0, 3, 4, 0, 0, 0, 0, 0, 0 ]
11107
[ "Thus", ",", "the", "quantitative", "analysis", "of", "AML1/ETO", "transcripts", "may", "be", "clinically", "useful", "in", "patients", "with", "t", "(", "8", ";", "21", ")", "AML", "." ]
[ 0, 0, 0, 0, 0, 0, 3, 4, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11108
[ "Upregulation", "of", "c-Fos", "in", "activated", "T", "lymphoid", "and", "monocytic", "cells", "by", "human", "immunodeficiency", "virus-1", "Tat", "protein", "." ]
[ 0, 0, 9, 0, 0, 7, 8, 8, 8, 8, 0, 9, 10, 10, 10, 10, 0 ]
11109
[ "The", "regulatory", "Tat", "protein", "of", "the", "human", "immunodeficiency", "virus", "type-1", "(", "HIV-1", ")", "is", "essential", "for", "viral", "replication", "and", "also", "shows", "pleiotropic", "activities", "on", "various", "cell", "functions", "." ]
[ 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11110
[ "To", "get", "further", "insights", "into", "the", "molecular", "mechanisms", "underlying", "the", "biological", "activity", "of", "Tat", ",", "we", "investigated", "the", "effect", "of", "endogenous", "and", "exogenous", "Tat", "protein", "on", "c-fos", "gene", "expression", "in", "T", "lymphoblastoid", "(", "Jurkat", ")", "and", "monocytic", "(", "U937", ")", "cell", "lines", ",", "as", "well", "as", "in", "primary", "peripheral", "blood", "mononuclear", "cells", "(", "PBMC", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 1, 2, 0, 0, 0, 0, 0, 5, 0, 0, 0, 0, 5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 8, 8, 0, 7, 0, 0 ]
11111
[ "Transient", "cotransfection", "of", "tat", "cDNA", "in", "sense", "orientation", "(", "tat/S", ")", ",", "together", "with", "a", "plasmid", "containing", "the", "c-fos", "promoter", "(", "FC3", ",", "from-", "711", "to", "+42", ")", "in", "front", "of", "the", "bacterial", "chloramphenicol", "acetyltransferase", "(", "CAT", ")", "gene", "significantly", "enhanced", "CAT", "activity", "in", "Jurkat", "cells", "activated", "by", "the", "addition", "of", "15", "%", "fetal", "calf", "serum", "(", "FCS", ")", "or", "5", "micrograms/mL", "phytohemagglutinin", "plus", "10", "(", "-7", ")", "mol/L", "phorbol", "myristate", "acetate", "(", "PMA", ")", "and", "U937", "cells", "activated", "by", "15", "%", "FCS", "or", "10", "(", "-7", ")", "mol/L", "PMA", "." ]
[ 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 2, 2, 0, 0, 9, 0, 0, 5, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 5, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11112
[ "This", "effect", "was", "specifically", "due", "to", "Tat", ",", "since", "Jurkat", "and", "U937", "cells", "cotransfected", "either", "with", "tat", "cDNA", "in", "antisense", "orientation", "(", "tat/AS", ")", ",", "tat", "carrying", "a", "mutation", "in", "the", "aminoacid", "cys22-gly22", "(", "tat", "22/S", ")", "or", "with", "the", "backbone", "vector", "alone", "(", "pRPneo-SL3", ")", "did", "not", "show", "any", "significant", "difference", "in", "c-fos", "promoter", "activity", "as", "compared", "to", "cells", "transfected", "with", "FC3", "plasmid", "alone", "." ]
[ 0, 0, 0, 0, 0, 0, 9, 0, 0, 5, 0, 5, 6, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11113
[ "By", "using", "deletion", "mutants", "of", "the", "c-fos", "promoter", ",", "we", "found", "that", "the", "minimal", "DNA", "sequence", "required", "for", "Tat", "activity", "was", "located", "between", "nucleotides", "-404/-220", "and", "that", "the", "serum", "responsive", "element", "(", "SRE", ",", "-317/-288", ")", ",", "present", "within", "this", "region", ",", "was", "still", "responsive", "to", "Tat", "." ]
[ 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0 ]
11114
[ "A", "single", "point", "mutation", "in", "the", "SRE", "completely", "abrogated", "the", "responsiveness", "to", "tat/S", "." ]
[ 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0 ]
11115
[ "Exogenous", "recombinant", "Tat", "protein", "was", "also", "able", "to", "upregulate", "c-fos", "promoter", "activity", "in", "serum-activated", "Jurkat", "and", "U937", "cells", ",", "as", "well", "as", "endogenous", "c-fos", "mRNA", "expression", "and", "c-Fos", "protein", "synthesis", "in", "both", "serum-activated", "cell", "lines", "and", "primary", "PBMC", "." ]
[ 0, 0, 9, 10, 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 5, 0, 5, 6, 0, 0, 0, 0, 0, 3, 4, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0 ]
11116
[ "c-Fos", "protein", "was", "shown", "essential", "for", "an", "optimal", "transactivation", "of", "the", "HIV-1", "long", "terminal", "repeat", "(", "LTR", ")", "by", "Tat", ":", "incubation", "of", "Jurkat", "cells", "with", "antisense", ",", "but", "not", "sense", ",", "c-fos", "oligonucleotides", "significantly", "reduced", "either", "the", "Tat", "-enhanced", "expression", "of", "an", "LTR-CAT", "reporter", "construct", "or", "the", "levels", "of", "gag", "p24", "in", "the", "culture", "supernatants", "of", "Jurkat", "cells", "and", "PBMC", "acutely", "infected", "with", "HIV-1", "." ]
[ 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 0, 0, 0, 0, 9, 0, 0, 0, 5, 6, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 1, 2, 2, 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 5, 6, 0, 7, 0, 0, 0, 0, 0 ]
11117
[ "Our", "data", "suggest", "that", "the", "c-fos", "upregulation", "mediated", "by", "Tat", "might", "play", "a", "significant", "role", "in", "the", "control", "of", "viral", "gene", "transactivation", "." ]
[ 0, 0, 0, 0, 0, 1, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11118
[ "Cytokine", "signal", "networks", "and", "a", "new", "era", "in", "biomedical", "research", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11119
[ "Elucidation", "of", "the", "biochemical", "nature", "of", "the", "signal", "transduction", "pathway", "that", "regulate", "transcription", "and", "replication", "is", "the", "focus", "of", "attention", "in", "molecular", "biology", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11120
[ "This", "research", "may", "make", "feasible", "manipulation", "of", "growth", "and", "differentiation", "of", "mammalian", "cells", ",", "which", "in", "turn", "would", "have", "profound", "implication", "in", "biomedical", "research", "on", "cell", "and", "gene", "therapy", ",", "and", "development", "of", "pharmaceutical", "products", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11121
[ "Cytokines", "control", "growth", ",", "differentiation", ",", "death", ",", "and", "function", "of", "cells", "of", "lymphocytic", ",", "hemopoietic", "systems", ",", "and", "together", "with", "nerve", "cells", "provide", "a", "pertinent", "model", "to", "study", "intercellular", "communications", "and", "intercellular", "signal", "networks", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11122
[ "This", "review", "outlines", "general", "features", "of", "signal", "transduction", "and", "several", "aspects", "of", "cytokine", "networks", "are", "discussed", "with", "emphasis", "on", ":", "transcriptional", "regulation", "of", "Th1", "and", "Th2-specific", "cytokine", "genes", "in", "T", "cells", ",", "the", "roles", "of", "cytokines", "and", "their", "receptors", "in", "growth", "and", "differentiation", "of", "hemopoietic", "cells", ",", "and", "the", "manipulation", "of", "cytokine", "networks", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0 ]
11123
[ "Regulation", "of", "the", "tissue", "factor", "gene", "in", "human", "monocytic", "cells", "." ]
[ 0, 0, 0, 1, 2, 2, 0, 7, 8, 8, 0 ]
11124
[ "Role", "of", "AP-1", ",", "NF-kappa", "B/Rel", ",", "and", "Sp1", "proteins", "in", "uninduced", "and", "lipopolysaccharide-induced", "expression", "." ]
[ 0, 0, 9, 0, 9, 10, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0 ]
11125
[ "Tissue", "factor", "(", "TF", ")", "expression", "by", "peripheral", "blood", "monocytes", "during", "sepsis", "initiates", "intravascular", "thrombosis", "." ]
[ 9, 10, 0, 9, 0, 0, 0, 7, 8, 8, 0, 0, 0, 0, 0, 0 ]
11126
[ "Bacterial", "lipopolysaccharide", "(", "LPS", ")", "rapidly", "induces", "TF", "gene", "transcription", "in", "monocytes", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 7, 0 ]
11127
[ "The", "human", "TF", "promoter", "contains", "binding", "sites", "for", "the", "transcription", "factors", "AP-1", ",", "c-Rel/p65", ",", "Egr-1", ",", "and", "Sp1", "." ]
[ 0, 1, 2, 2, 0, 0, 0, 0, 0, 9, 10, 10, 0, 9, 0, 9, 0, 0, 9, 0 ]
11128
[ "NF-kappa", "B/Rel", "proteins", "have", "been", "shown", "to", "physically", "interact", "with", "both", "AP-1", "and", "Sp1", "proteins", "." ]
[ 9, 10, 10, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 10, 0 ]
11129
[ "In", "this", "study", ",", "we", "investigated", "the", "role", "of", "these", "transcription", "factors", "in", "uninduced", "and", "LPS-induced", "TF", "gene", "expression", "in", "human", "monocytic", "THP-1", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 5, 6, 6, 6, 0 ]
11130
[ "Deletional", "analysis", "indicated", "that", "five", "Sp1", "sites", "mediated", "basal", "expression", "in", "uninduced", "cells", "." ]
[ 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0 ]
11131
[ "The", "two", "AP-1", "sites", "bound", "c-Fos/c-Jun", "heterodimers", "in", "both", "unstimulated", "and", "LPS-stimulated", "cells", "." ]
[ 0, 0, 1, 2, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0 ]
11132
[ "Maximal", "LPS", "induction", "of", "the", "TF", "promoter", "required", "the", "two", "AP-1", "sites", "and", "the", "kappa", "B", "site", "within", "the", "LPS", "response", "element", "." ]
[ 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 1, 2, 0, 0, 1, 2, 2, 0, 0, 1, 2, 2, 0 ]
11133
[ "Disruption", "of", "the", "conserved", "spacing", "between", "the", "proximal", "AP-1", "site", "and", "the", "kappa", "B", "site", "abolished", "LPS", "induction", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 1, 2, 2, 0, 0, 0, 0 ]
11134
[ "Replacement", "of", "the", "two", "AP-1", "sites", "with", "intrinsically", "bent", "DNA", "partially", "restored", "LPS", "induction", ",", "suggesting", "an", "additional", "structural", "role", "for", "the", "AP-1", "sites", "." ]
[ 0, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 0 ]
11135
[ "Synergistic", "transactivation", "of", "the", "LPS", "response", "element", "in", "Drosophila", "Schneider", "cells", "by", "coexpression", "of", "c-Fos", ",", "c-Jun", ",", "c-Rel", ",", "and", "p65", "or", "c-Jun", "and", "p65", "required", "the", "transactivation", "domains", "of", "c-Jun", "and", "p65", "." ]
[ 0, 0, 0, 0, 1, 2, 2, 0, 5, 6, 6, 0, 0, 0, 9, 0, 9, 0, 9, 0, 0, 9, 0, 9, 0, 9, 0, 0, 0, 0, 0, 9, 0, 9, 0 ]
11136
[ "These", "data", "indicated", "that", "c-Fos", "/c-Jun", ",", "c-Rel", "/p65", ",", "and", "Sp1", "regulate", "TF", "gene", "expression", "in", "human", "monocytic", "cells", "." ]
[ 0, 0, 0, 0, 9, 10, 0, 9, 0, 0, 0, 9, 0, 1, 2, 0, 0, 7, 8, 8, 0 ]
11137
[ "Inhibitory", "effect", "of", "growth", "hormone", "on", "TNF-alpha", "secretion", "and", "nuclear", "factor-kappaB", "translocation", "in", "lipopolysaccharide-stimulated", "human", "monocytes", "." ]
[ 0, 0, 0, 0, 0, 0, 9, 0, 0, 9, 10, 0, 0, 0, 7, 8, 0 ]
11138
[ "Several", "studies", "have", "pointed", "to", "a", "link", "between", "immune", "and", "endocrine", "systems", ",", "including", "a", "regulatory", "function", "of", "GH", "on", "monocyte", "activation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0 ]
11139
[ "The", "present", "study", "demonstrates", "that", "human", "THP-1", "promonocytic", "cells", ",", "engineered", "by", "gene", "transfer", "to", "constitutively", "produce", "human", "growth", "hormone", "(", "hGH", ")", ",", "secreted", "depressed", "amounts", "of", "TNF-alpha", "in", "response", "to", "challenge", "by", "LPS", "." ]
[ 0, 0, 0, 0, 0, 5, 6, 6, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0 ]
11140
[ "The", "effect", "of", "GH", "appears", "to", "occur", "in", "an", "autocrine", "fashion", ",", "since", "the", "inhibitory", "effect", "on", "TNF-alpha", "secretion", "by", "constitutive", "GH", "production", "could", "be", "abolished", "in", "the", "presence", "of", "anti-hGH", "mAb", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11141
[ "The", "GH-induced", "inhibitory", "effect", "was", "also", "observed", "using", "normal", "human", "monocytes", "and", "monocyte-derived", "macrophages", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 7, 0 ]
11142
[ "Inhibition", "of", "TNF-alpha", "production", "by", "THP-1-hGH-transfected", "cells", "cultured", "in", "the", "presence", "of", "LPS", "is", "dependent", "on", "a", "selective", "pathway", ",", "since", "no", "inhibition", "of", "TNF-alpha", "production", "was", "observed", "when", "cells", "were", "cultured", "in", "the", "presence", "of", "PMA", "." ]
[ 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11143
[ "Inhibition", "of", "TNF-alpha", "secretion", "by", "LPS-stimulated", "THP-1-hGH", "cells", "was", "associated", "with", "a", "decrease", "in", "nuclear", "translocation", "of", "nuclear", "factor-kappaB", "." ]
[ 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0 ]
11144
[ "The", "capacity", "of", "GH", "to", "inhibit", "LPS-induced", "TNF-alpha", "production", "by", "monocytes", "without", "altering", "other", "pathways", "leading", "to", "TNF-alpha", "production", "may", "be", "of", "potential", "relevance", "in", "septic", "shock", ",", "since", "GH", "is", "available", "for", "clinical", "use", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 7, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11145
[ "Nuclear", "factor-kappaB", "activation", "in", "human", "monocytes", "stimulated", "with", "lipopolysaccharide", "is", "inhibited", "by", "fibroblast", "conditioned", "medium", "and", "exogenous", "PGE2", "." ]
[ 9, 10, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0 ]
11146
[ "The", "nuclear", "factor", "kappaB", "(", "NF-kappaB", ")", "is", "thought", "to", "be", "crucially", "involved", "in", "the", "gene", "activation", "of", "several", "cytokines", ",", "including", "tumor", "necrosis", "factor", "alpha", "(", "TNF", ")", "." ]
[ 0, 9, 10, 10, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 10, 0, 9, 0, 0 ]
11147
[ "Previously", ",", "we", "showed", "that", "fibroblast", "conditioned", "medium", "(", "FCM", ")", "is", "able", "to", "inhibit", "both", "TNF", "mRNA", "accumulation", "and", "protein", "release", "in", "peripheral", "blood-derived", "human", "monocytes", "(", "PBM", ")", "stimulated", "with", "lipopolysaccharide", "(", "LPS", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 3, 4, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0 ]
11148
[ "In", "this", "study", "we", "have", "investigated", "the", "effect", "of", "FCM", "on", "the", "LPS-induced", "DNA-binding", "activity", "of", "NF-kappaB", ",", "by", "means", "of", "electrophoretic", "shift", "assay", "(", "EMSA", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11149
[ "We", "provide", "evidence", "that", "FCM", "strongly", "inhibits", "the", "LPS-induced", "NF-kappaB", "activation", "in", "PBM", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 7, 0 ]
11150
[ "Furthermore", ",", "we", "show", "that", "exogenous", "PGE2", "mimics", "the", "NF-kappaB", "inhibitory", "effect", "of", "FCM", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0 ]
11151
[ "On", "the", "other", "hand", ",", "FCM", "produced", "in", "the", "presence", "of", "indomethacin", "does", "not", "inhibit", "NF-kappaB", "activation", "by", "LPS", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0 ]
11152
[ "Our", "results", "lend", "further", "support", "to", "the", "hypothesis", "that", "inflammatory", "and", "immune", "responses", "of", "monocytes/macrophages", "may", "be", "modulated", "at", "the", "molecular", "level", "by", "signals", "originating", "from", "tissue", "structural", "cells", "such", "as", "fibroblasts", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0 ]
11153
[ "Human", "neutrophil", "elastase", "proteolytically", "activates", "the", "platelet", "integrin", "alphaIIbbeta3", "through", "cleavage", "of", "the", "carboxyl", "terminus", "of", "the", "alphaIIb", "subunit", "heavy", "chain", "." ]
[ 9, 10, 10, 0, 0, 0, 9, 10, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11154
[ "Involvement", "in", "the", "potentiation", "of", "platelet", "aggregation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0 ]
11155
[ "Neutrophil", "elastase", "(", "NE", ")", "and", "cathepsin", "G", "are", "two", "serine", "proteinases", "released", "concomitantly", "by", "stimulated", "polymorphonuclear", "neutrophils", "." ]
[ 9, 10, 0, 9, 0, 0, 9, 10, 0, 0, 9, 10, 0, 0, 0, 0, 7, 8, 0 ]
11156
[ "We", "previously", "demonstrated", "that", "while", "NE", "by", "itself", "does", "not", "activate", "human", "platelets", ",", "it", "strongly", "enhances", "the", "weak", "aggregation", "induced", "by", "a", "threshold", "concentration", "of", "cathepsin", "G", "(", "threshold", "of", "cathepsin", "G", ")", "(", "Renesto", ",", "P.", ",", "and", "Chignard", ",", "M.", "(", "1993", ")", "Blood", "82", ",", "139-144", ")", "." ]
[ 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11157
[ "The", "aim", "of", "this", "study", "was", "to", "delineate", "the", "molecular", "mechanisms", "involved", "in", "this", "potentiation", "process", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11158
[ "Two", "main", "pieces", "of", "data", "prompted", "us", "to", "focus", "on", "the", "activation", "of", "the", "platelet", "fibrinogen", "receptor", ",", "the", "alphaIIbbeta3", "integrin", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 0, 0, 9, 10, 0 ]
11159
[ "First", ",", "previous", "studies", "have", "shown", "this", "integrin", "to", "be", "particularly", "prone", "to", "proteolytic", "regulation", "of", "its", "function", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11160
[ "Second", ",", "we", "found", "that", "the", "potentiating", "activity", "of", "NE", "on", "the", "threshold", "of", "cathepsin", "G", "-induced", "platelet", "aggregation", "was", "strictly", "dependent", "on", "the", "presence", "of", "exogenous", "fibrinogen", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 9, 10, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0 ]
11161
[ "Using", "flow", "cytometry", "analysis", ",", "NE", "was", "shown", "to", "trigger", "a", "time-dependent", "binding", "of", "PAC-1", "and", "AP-5", ",", "two", "monoclonal", "antibodies", "specific", "for", "the", "activated", "and", "ligand-occupied", "conformers", "of", "alphaIIbbeta3", "." ]
[ 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11162
[ "Furthermore", ",", "the", "potentiated", "aggregation", "was", "shown", "to", "result", "from", "an", "increased", "capacity", "of", "platelets", "to", "bind", "fibrinogen", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11163
[ "Indeed", ",", "the", "combination", "of", "NE", "and", "threshold", "of", "cathepsin", "G", "increased", "the", "binding", "of", "PAC-1", "approximately", "5.5-fold", "over", "basal", "values", "measured", "on", "nontreated", "platelets", ",", "whereas", "this", "binding", "raised", "only", "by", "approximately", "3-fold", "in", "threshold", "of", "cathepsin", "G-stimulated", "platelets", "(", "p", "<", "0.05", ")", "." ]
[ 0, 0, 0, 0, 0, 9, 0, 0, 0, 9, 10, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0 ]
11164
[ "By", "contrast", ",", "phosphatidic", "acid", "accumulation", ",", "pleckstrin", "phosphorylation", ",", "and", "calcium", "mobilization", "produced", "by", "the", "combination", "of", "NE", "and", "threshold", "of", "cathepsin", "G", "were", "not", "significantly", "different", "from", "those", "measured", "with", "threshold", "of", "cathepsin", "G", "alone", "(", "p", ">", "0.05", ")", ",", "indicating", "that", "the", "phospholipase", "C", "/protein", "kinase", "C", "pathway", "is", "not", "involved", "in", "the", "potentiation", "of", "aggregation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 10, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11165
[ "The", "foregoing", "data", ",", "as", "well", "as", "the", "requirement", "of", "catalytically", "active", "NE", "to", "trigger", "alphaIIbbeta3", "activation", "and", "potentiate", "threshold", "of", "cathepsin", "G", "-initiated", "platelet", "aggregation", ",", "led", "us", "to", "examine", "whether", "the", "structure", "of", "this", "integrin", "was", "affected", "by", "NE", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 9, 0 ]
11166
[ "Immunoblot", "and", "flow", "cytometry", "analysis", "revealed", "a", "limited", "proteolysis", "of", "the", "carboxyl", "terminus", "of", "the", "alphaIIb", "subunit", "heavy", "chain", "(", "alphaIIbH", ")", ",", "as", "judged", "by", "the", "disappearance", "of", "the", "epitope", "for", "the", "monoclonal", "antibody", "PMI-1", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 0 ]
11167
[ "Mass", "spectrometry", "studies", "performed", "on", "a", "synthetic", "peptide", "mapping", "over", "the", "cleavage", "domain", "of", "alphaIIbH", "predicted", "the", "site", "of", "proteolysis", "as", "located", "between", "Val837", "and", "Asp838", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11168
[ "Treatment", "by", "NE", "of", "ATP-depleted", "platelets", "or", "Chinese", "hamster", "ovary", "cells", "expressing", "human", "recombinant", "alphaIIbbeta3", "clearly", "established", "that", "activation", "of", "the", "integrin", "was", "independent", "of", "signal", "transduction", "events", "and", "was", "concomitant", "with", "the", "proteolysis", "of", "alphaIIbH", "." ]
[ 0, 0, 9, 0, 0, 7, 0, 5, 6, 6, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11169
[ "AP-1", "derived", "from", "mature", "monocytes", "and", "astrocytes", "preferentially", "interacts", "with", "the", "HTLV-I", "promoter", "central", "21", "bp", "repeat", "." ]
[ 9, 0, 0, 0, 7, 0, 7, 0, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0 ]
11170
[ "Characterization", "of", "the", "cellular", "transcription", "factors", "interacting", "with", "the", "human", "T", "cell", "lymphotropic", "virus", "type", "I", "(", "HTLV-I", ")", "long", "terminal", "repeat", "(", "LTR", ")", "is", "essential", "to", "dissecting", "the", "mechanisms", "involved", "in", "viral", "transcription", "that", "may", "be", "pertinent", "to", "the", "oncogenic", "and", "neuropathogenic", "processes", "associated", "with", "HTLV-I", "infection", "in", "both", "the", "immune", "and", "nervous", "systems", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11171
[ "Electrophoretic", "mobility", "shift", "(", "EMS", ")", "analyses", "utilizing", "oligonucleotides", "homologous", "to", "each", "of", "the", "21", "bp", "repeat", "elements", "reacted", "with", "nuclear", "extracts", "derived", "from", "cell", "lines", "of", "lymphocytic", ",", "monocytic", ",", "neuronal", ",", "and", "glial", "cell", "origin", "have", "demonstrated", "differential", "binding", "of", "cellular", "factors", "to", "the", "three", "21", "bp", "repeats", "(", "1-4", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11172
[ "ATF/CREB", "and", "Sp", "family", "members", "interacted", "with", "the", "21", "bp", "repeats", "to", "form", "DNA-protein", "complexes", "common", "to", "all", "cell", "types", "examined", "." ]
[ 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11173
[ "However", ",", "a", "unique", "DNA-protein", "complex", "was", "detected", "when", "the", "promoter", "central", "21", "bp", "repeat", "was", "reacted", "with", "nuclear", "extracts", "derived", "from", "either", "the", "U-373", "MG", "glioblastoma", "cell", "line", "or", "the", "THP-1", "mature", "monocytic", "cell", "line", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 5, 6, 6, 6, 6, 0, 0, 5, 6, 6, 6, 6, 0 ]
11174
[ "Based", "on", "nucleotide", "sequence", "requirements", "and", "immunoreactivity", ",", "we", "demonstrate", "that", "this", "DNA-protein", "complex", "is", "comprised", "of", "the", "AP-1", "components", ",", "Fos", "and", "Jun", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 9, 0, 9, 0 ]
11175
[ "HIV", "does", "not", "replicate", "in", "naive", "CD4", "T", "cells", "stimulated", "with", "CD3/CD28", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 9, 0 ]
11176
[ "In", "this", "report", ",", "we", "demonstrate", "that", "the", "T", "cell", "tropic", "strain", "of", "HIV", ",", "LAI", ",", "does", "not", "replicate", "in", "naive", "CD4", "T", "cells", "stimulated", "by", "cross-linking", "CD3", "and", "CD28", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 9, 0, 9, 0 ]
11177
[ "In", "contrast", ",", "LAI", "replicates", "well", "in", "memory", "CD4", "T", "cells", "stimulated", "in", "the", "same", "way", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0 ]
11178
[ "Unlike", "this", "physiologically", "relevant", "stimulation", ",", "PHA", "stimulates", "productive", "LAI", "replication", "in", "both", "naive", "and", "memory", "T", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0 ]
11179
[ "These", "studies", "were", "conducted", "with", "highly", "purified", "(", "FACS-isolated", ")", "subsets", "of", "CD4", "T", "cells", "identified", "by", "expression", "of", "both", "CD45RA", "and", "CD62L", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 9, 0, 9, 0 ]
11180
[ "Remixing", "of", "purified", "T", "cells", "showed", "that", "naive", "T", "cells", "do", "not", "suppress", "LAI", "replication", "in", "memory", "T", "cells", "and", "that", "memory", "T", "cells", "do", "not", "restore", "LAI", "expression", "in", "naive", "T", "cells", "." ]
[ 0, 0, 0, 7, 8, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0 ]
11181
[ "The", "suppression", "of", "productive", "LAI", "replication", "in", "naive", "T", "cells", "is", "not", "due", "to", "differential", "expression", "of", "viral", "coreceptors", ",", "nor", "is", "it", "due", "to", "inhibition", "of", "activation", "of", "the", "important", "HIV", "transcription", "factors", ",", "nuclear", "factor-kappaB", "and", "activator", "protein-1", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 9, 10, 0 ]
11182
[ "The", "inherent", "resistance", "of", "naive", "T", "cells", "to", "productive", "HIV", "infection", ",", "coupled", "with", "their", "proliferative", "advantage", "as", "demonstrated", "here", ",", "provides", "a", "sound", "basis", "for", "proposed", "clinical", "therapies", "using", "ex", "vivo", "expansion", "and", "reinfusion", "of", "CD4", "T", "cells", "from", "HIV-infected", "adults", "." ]
[ 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0 ]
11183
[ "A", "PMLRARalpha", "transgene", "initiates", "murine", "acute", "promyelocytic", "leukemia", "." ]
[ 0, 1, 2, 0, 0, 0, 0, 0, 0 ]
11184
[ "The", "malignant", "cells", "of", "acute", "promyelocytic", "leukemia", "(", "APL", ")", "contain", "a", "reciprocal", "chromosomal", "translocation", "that", "fuses", "the", "promyelocytic", "leukemia", "gene", "(", "PML", ")", "with", "the", "retinoic", "acid", "receptor", "alpha", "gene", "(", "RAR", "alpha", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 0, 1, 0, 0, 0, 1, 2, 2, 2, 2, 0, 1, 2, 0, 0 ]
11185
[ "To", "test", "the", "hypothesis", "that", "the", "chimera", "PMLRAR", "alpha", "plays", "a", "role", "in", "leukemogenesis", ",", "we", "expressed", "a", "PMLRAR", "alpha", "cDNA", "in", "myeloid", "cells", "of", "transgenic", "mice", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 0, 7, 8, 0, 0, 0, 0 ]
11186
[ "PMLRAR", "alpha", "transgenic", "mice", "exhibited", "impaired", "neutrophil", "maturation", "early", "in", "life", ",", "which", "progressed", "at", "a", "low", "frequency", "over", "the", "course", "of", "several", "months", "to", "overt", "APL", "." ]
[ 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11187
[ "Both", "the", "preleukemic", "state", "and", "the", "leukemia", "could", "be", "transplanted", "to", "nontransgenic", "mice", ",", "and", "the", "transplanted", "preleukemia", "could", "progress", "to", "APL", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11188
[ "The", "APL", "recapitulated", "features", "of", "the", "human", "disease", ",", "including", "a", "response", "to", "retinoic", "acid", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11189
[ "Retinoic", "acid", "caused", "the", "leukemic", "cells", "to", "differentiate", "in", "vitro", "and", "in", "vivo", ",", "eliciting", "remissions", "of", "both", "the", "preleukemic", "state", "and", "APL", "in", "mice", "." ]
[ 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11190
[ "Our", "results", "demonstrate", "that", "PMLRAR", "alpha", "impairs", "neutrophil", "differentiation", "and", "initiates", "the", "development", "of", "APL", "." ]
[ 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11191
[ "The", "transgenic", "mice", "described", "here", "provide", "an", "apparently", "accurate", "model", "for", "human", "APL", "that", "includes", "clear", "evidence", "of", "tumor", "progression", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11192
[ "The", "model", "should", "be", "useful", "for", "exploring", "the", "molecular", "pathogenesis", "of", "APL", "and", "the", "mechanisms", "of", "the", "therapeutic", "response", "to", "retinoic", "acid", ",", "as", "well", "as", "for", "preclinical", "studies", "of", "therapeutic", "regimens", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11193
[ "DNA", "methylation", "changes", "in", "hematologic", "malignancies", ":", "biologic", "and", "clinical", "implications", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11194
[ "DNA", "methylation", "changes", "are", "among", "the", "most", "common", "detectable", "abnormalities", "in", "human", "neoplasia", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11195
[ "Hypermethylation", "within", "the", "promoters", "of", "selected", "genes", "appears", "to", "be", "especially", "common", "in", "all", "types", "of", "human", "hematopoietic", "neoplasms", ",", "and", "is", "usually", "associated", "with", "inactivation", "of", "the", "involved", "gene", "(", "s", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11196
[ "Such", "hypermethylation-associated", "silencing", "of", "gene", "expression", "has", "been", "shown", "for", "several", "genes", "regulating", "the", "growth", "and", "differentiation", "of", "hematopoietic", "cells", ",", "including", "the", "estrogen", "receptor", "(", "ER", ")", "gene", ",", "P15", ",", "P16", "and", "others", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 1, 2, 2, 2, 2, 2, 0, 1, 0, 1, 0, 0, 0 ]
11197
[ "Hypermethylation", "within", "the", "promoters", "of", "some", "genes", "appear", "to", "be", "an", "early", "event", "in", "the", "pathogenesis", "of", "neoplasia", "(", "ER", ",", "P15", ")", ",", "while", "other", "genes", "seem", "to", "become", "methylated", "during", "the", "progression", "of", "leukemias", "(", "HIC1", ",", "c-abl", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0 ]
11198
[ "The", "high", "prevalence", "of", "promoter", "methylation", "suggests", "that", "this", "molecular", "abnormality", "can", "be", "used", "to", "monitor", "disease", "activity", "during", "therapy", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11199
[ "In", "addition", ",", "new", "technology", "allows", "the", "sensitive", "identification", "of", "gene", "hypermethylation", "in", "a", "background", "of", "normal", "cells", ",", "suggesting", "possible", "new", "strategies", "for", "the", "detection", "of", "minimal", "residual", "disease", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
11200
[ "Finally", ",", "reactivation", "of", "tumor-suppressor", "gene", "expression", "through", "pharmacologic", "inhibition", "of", "DNA", "methyltransferase", "and", "resultant", "DNA", "demethylation", "appears", "to", "be", "a", "promising", "new", "avenue", "of", "therapy", "in", "acute", "leukemia", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]