id
stringlengths
1
5
tokens
sequence
ner_tags
sequence
12201
[ "It", "has", "been", "shown", "that", "eosinophil", "stimulation", "by", "these", "cytokines", "is", "associated", "with", "increases", "in", "tyrosine", "phosphorylation", "of", "several", "cellular", "substrates", "." ]
[ 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12202
[ "In", "the", "past", "few", "years", ",", "there", "has", "been", "some", "progress", "in", "defining", "the", "tyrosine", "kinases", "that", "are", "activated", "by", "the", "IL-3/IL-5/GM-CSF", "receptor", "beta-subunit", "in", "eosinophils", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 9, 10, 10, 0, 7, 0 ]
12203
[ "This", "review", "will", "concentrate", "on", "this", "topic", "and", "on", "its", "role", "for", "the", "regulation", "of", "eosinophil", "apoptosis", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0 ]
12204
[ "Requirement", "of", "GATA-1", "and", "p45", "NF-E2", "expression", "in", "butyric", "acid-induced", "erythroid", "differentiation", "." ]
[ 0, 0, 9, 0, 9, 10, 0, 0, 0, 0, 7, 0, 0 ]
12205
[ "Butyric", "acid", "(", "BA", ")", "is", "known", "to", "induce", "overexpression", "of", "fetal", "hemoglobin", "and", "then", "erythroid", "differentiation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 0, 7, 0, 0 ]
12206
[ "Therefore", ",", "BA", "is", "currently", "under", "clinical", "investigation", "as", "a", "potential", "therapy", "for", "the", "treatment", "of", "sickle", "cell", "disease", "and", "cancer", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12207
[ "Nevertheless", ",", "the", "molecular", "mechanisms", "involved", "in", "BA-induced", "differentiation", "remain", "largely", "unknown", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12208
[ "Previous", "reports", "have", "shown", "that", "BA-induced", "overexpression", "of", "erythroid", "genes", "occurred", "at", "the", "transcriptional", "level", ",", "suggesting", "the", "involvement", "of", "erythroid", "transcription", "factors", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0 ]
12209
[ "Here", ",", "we", "intend", "to", "demonstrate", "the", "requirement", "of", "GATA-1", "and", "NF-E2", "transcription", "factors", "in", "the", "BA-induced", "erythroid", "differentiation", "of", "human", "leukemic", "K562", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 10, 10, 0, 0, 0, 7, 0, 0, 5, 6, 6, 6, 0 ]
12210
[ "Time-course", "experiments", "showed", "that", "nuclear", "levels", "of", "GATA-1", "and", "p45", "NF-E2", "proteins", "increased", "during", "BA", "treatment", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 10, 10, 0, 0, 0, 0, 0 ]
12211
[ "Moreover", ",", "antisense", "oligodeoxynucleotides", "targeting", "either", "GATA-1", "or", "p45", "NF-E2", "proteins", "inhibited", "both", "protein", "expression", "and", "BA-induced", "differentiation", "." ]
[ 0, 0, 0, 0, 0, 0, 9, 0, 9, 10, 10, 0, 0, 0, 0, 0, 0, 0, 0 ]
12212
[ "In", "contrast", ",", "BA-induced", "cell", "growth", "inhibition", "was", "not", "affected", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12213
[ "These", "results", "provide", "the", "first", "direct", "evidence", "for", "the", "requirement", "of", "GATA-1", "and", "NF-E2", "in", "BA-induced", "differentiation", "process", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 0, 0, 0, 0, 0 ]
12214
[ "Characterisation", "of", "regulatory", "sequences", "at", "the", "Epstein-Barr", "virus", "BamHI", "W", "promoter", "." ]
[ 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 2, 0 ]
12215
[ "Epstein-Barr", "virus", ",", "a", "human", "gammaherpesvirus", ",", "possesses", "a", "unique", "set", "of", "latent", "genes", "whose", "constitutive", "expression", "in", "B", "cells", "leads", "to", "cell", "growth", "transformation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0 ]
12216
[ "The", "initiation", "of", "this", "growth", "transforming", "infection", "depends", "on", "a", "viral", "promoter", "in", "BamHI", "W", "(", "Wp", ")", "whose", "regulation", "is", "poorly", "understood", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0 ]
12217
[ "Using", "Wp", "reporter", "constructs", "in", "in", "vitro", "transfection", "assays", ",", "we", "found", "that", "Wp", "was", "11-", "to", "190-fold", "more", "active", "in", "B", "cell", "than", "in", "non-B", "cell", "lines", "and", "that", "three", "regions", "of", "the", "promoter", "(", "termed", "UAS1", ",", "UAS2", ",", "and", "UAS3", ")", "contributed", "to", "transcriptional", "activation", "." ]
[ 0, 1, 2, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 5, 6, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0 ]
12218
[ "The", "upstream", "regions", "UAS3", "(", "-1168", "to", "-440", ")", "and", "UAS2", "(", "-352", "to", "-264", ")", "both", "functioned", "in", "a", "cell", "lineage-independent", "manner", "and", "were", "together", "responsible", "for", "the", "bulk", "of", "Wp", "activity", "in", "non-B", "cells", ";", "mutational", "analysis", "indicated", "the", "importance", "of", "a", "YY1", "binding", "site", "in", "UAS2", "in", "that", "context", "." ]
[ 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 0, 1, 0, 0, 0, 0 ]
12219
[ "By", "contrast", ",", "UAS1", "(", "-140", "to", "-87", ")", "was", "B", "cell", "specific", "and", "was", "the", "key", "determinant", "of", "the", "promoter", "'s", "increased", "activity", "in", "B", "cell", "lines", "." ]
[ 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 5, 6, 6, 0 ]
12220
[ "Mutational", "analysis", "of", "UAS1", "sequences", "combined", "with", "in", "vitro", "bandshift", "assays", "revealed", "the", "presence", "of", "three", "binding", "sites", "for", "cellular", "factors", "in", "this", "region", "." ]
[ 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12221
[ "When", "mutations", "that", "abolished", "factor", "binding", "in", "bandshift", "assays", "were", "introduced", "into", "a", "Wp", "reporter", "construct", ",", "the", "loss", "of", "any", "one", "of", "the", "three", "UAS1", "binding", "sites", "was", "sufficient", "to", "reduce", "promoter", "activity", "by", "10-", "to", "30-fold", "in", "B", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0 ]
12222
[ "From", "sequence", "analysis", ",", "two", "of", "these", "appear", "to", "be", "novel", "transcription", "factor", "binding", "sites", ",", "whereas", "the", "third", "was", "identified", "as", "a", "cyclic", "AMP", "response", "element", "(", "CRE", ")", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 0, 1, 0, 0 ]
12223
[ "Our", "data", "indicate", "that", "this", "CRE", "interacts", "with", "CREB", "and", "ATF1", "proteins", "present", "in", "B", "cell", "nuclear", "extracts", "and", "that", "this", "interaction", "is", "important", "for", "Wp", "activity", "." ]
[ 0, 0, 0, 0, 0, 1, 0, 0, 9, 0, 9, 10, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0 ]
12224
[ "In", "situ", "RT-PCR", "detection", "of", "Epstein-Barr", "virus", "immediate-early", "transcripts", "in", "CD4+", "and", "CD8+", "T", "lymphocytes", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0 ]
12225
[ "AIDS-related", "Epstein-Barr", "virus", "(", "EBV", ")", "-associated", "T", "cell", "lymphomas", "are", "emerging", "as", "a", "new", ",", "distinct", "histopathological", "entity", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12226
[ "The", "pathway", "whereby", "EBV", "infects", "T", "cells", "as", "well", "as", "the", "initial", "EBV", "transcriptional", "program", "in", "T", "cells", "has", "not", "been", "established", "." ]
[ 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0 ]
12227
[ "In", "order", "to", "shed", "light", "on", "the", "early", "events", "of", "the", "EBV", "infection", "of", "T", "cells", ",", "we", "have", "used", "in", "situ", "reverse", "transcription", "based", "polymerase", "chain", "reaction", "(", "RT-PCR", ")", "to", "study", "the", "initial", "EBV", "transcriptional", "program", "in", "homogeneous", "CD4+", "and", "CD8+", "lymphocytes", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0 ]
12228
[ "Following", "EBV", "infection", ",", "Epstein-Barr", "nuclear", "antigen", "(", "EBNA", ")", "expression", "could", "be", "detected", "in", "T", "rosetting", "CD4+", "and", "CD8+", "T", "lymphocytes", "." ]
[ 0, 0, 0, 0, 9, 10, 10, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0 ]
12229
[ "Only", "a", "few", "cells", "showed", "viral", "capsid", "antigen", "(", "VCA", ")", "." ]
[ 0, 0, 0, 0, 0, 9, 10, 10, 0, 9, 0, 0 ]
12230
[ "EBV", "immediate-early", "gene", "transcripts", "(", "BZLF1", ",", "BRLF1", ",", "and", "BMLF1", ")", "encoded", "in", "the", "BamHI", "Z", ",", "R", ",", "and", "M", "fragments", "could", "be", "detected", "by", "in", "situ", "RT-PCR", "in", "the", "EBV", "producer", "cell", "line", "B95.8", "." ]
[ 0, 0, 0, 0, 0, 3, 0, 3, 0, 0, 3, 0, 0, 0, 0, 9, 10, 0, 9, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 5, 6, 6, 0 ]
12231
[ "Both", "BZLF1", "and", "BRLF1", "immediate-early", "transcripts", ",", "but", "not", "BMLF1", "transcript", ",", "could", "be", "detected", "in", "individual", "CD4+", "and", "CD8+", "T", "cells", "infected", "with", "EBV", "." ]
[ 0, 3, 0, 3, 4, 4, 0, 0, 0, 3, 4, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0 ]
12232
[ "Demonstration", "of", "EBV", "mRNA", "transcripts", "encoding", "immediate-early", "transcriptional", "transactivators", "in", "EBV-infected", "T", "cells", "provides", "the", "first", "evidence", "for", "a", "possible", "mechanism", "whereby", "EBV", "could", "contribute", "to", "T", "cell", "proliferation", "and", "EBV-associated", "T", "cell", "malignancies", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 7, 8, 0, 0 ]
12233
[ "The", "linkage", "between", "T-cell", "and", "dendritic", "cell", "development", "in", "the", "mouse", "thymus", "." ]
[ 0, 0, 0, 7, 0, 7, 8, 0, 0, 0, 0, 0, 0 ]
12234
[ "Thymic", "dendritic", "cells", "(", "DC", ")", "mediate", "negative", "selection", "at", "a", "relatively", "late", "stage", "of", "the", "T-cell", "developmental", "pathway", "." ]
[ 7, 8, 8, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0 ]
12235
[ "We", "present", "evidence", "that", "the", "development", "of", "thymic", "DC", "and", "of", "T-lineage", "cells", "is", "linked", "via", "a", "common", "precursor", "at", "an", "early", "stage", "of", "thymocyte", "development", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12236
[ "T-lineage", "precursor", "populations", "from", "the", "adult", "mouse", "thymus", ",", "prior", "to", "T-cell", "receptor", "gene", "rearrangement", ",", "display", "a", "capacity", "to", "produce", "DC", "as", "well", "as", "T", "cells", "in", "the", "thymus", ",", "and", "are", "very", "efficient", "precursors", "of", "DC", "in", "culture", "." ]
[ 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0 ]
12237
[ "These", "lymphoid/DC", "precursors", "have", "little", "capacity", "to", "form", "myeloid", "cells", ",", "indicating", "that", "thymic", "DC", "are", "a", "lymphoid-related", "rather", "than", "myeloid-related", "lineage", "." ]
[ 0, 7, 8, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 7, 8, 0 ]
12238
[ "In", "contrast", "to", "myeloid-related", "DC", ",", "granulocyte-macrophage", "colony-stimulating", "factor", "is", "not", "required", "for", "the", "development", "of", "these", "lymphoid-related", "DC", "in", "vivo", "or", "in", "vitro", "." ]
[ 0, 0, 0, 7, 8, 0, 9, 10, 10, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0 ]
12239
[ "DC", "can", "develop", "in", "mutant", "mice", "lacking", "mature", "T", "cells", ",", "provided", "the", "common", "precursors", "are", "present", "." ]
[ 7, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0 ]
12240
[ "However", ",", "in", "mutant", "mice", "lacking", "functional", "Ikaros", "transcription", "factors", ",", "there", "are", "deficiencies", "in", "lymphoid", "precursor", "cells", ",", "in", "mature", "lymphoid", "cells", "and", "in", "DC", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 0, 0, 0, 0, 0, 7, 8, 8, 0, 0, 0, 7, 8, 0, 0, 7, 0 ]
12241
[ "Host", "control", "of", "HIV-1", "parasitism", "in", "T", "cells", "by", "the", "nuclear", "factor", "of", "activated", "T", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 9, 10, 10, 10, 10, 10, 0 ]
12242
[ "Post", "HIV-1", "entry", ",", "productive", "HIV-1", "infection", "of", "primary", "T", "cells", "requires", "overcoming", "several", "cellular", "blocks", "to", "provirus", "establishment", "and", "replication", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12243
[ "Activation", "of", "unknown", "host", "intracellular", "events", "overcomes", "such", "inhibitory", "steps", "and", "is", "concomitant", "with", "HIV-1", "replication", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12244
[ "We", "show", "that", "the", "transcription", "factor", "NFATc", "was", "sufficient", "as", "a", "cellular", "factor", "to", "induce", "a", "highly", "permissive", "state", "for", "HIV-1", "replication", "in", "primary", "CD4+", "T", "cells", "." ]
[ 0, 0, 0, 0, 9, 10, 10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0 ]
12245
[ "NFATc", "overcame", "a", "blockade", "at", "reverse", "transcription", "and", "permitted", "active", "HIV-1", "replication", "." ]
[ 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12246
[ "Pharmacologic", "blockade", "of", "endogenous", "NFAT", "activity", "by", "FK506", "or", "CsA", "inhibited", "synthesis", "of", "reverse", "transcription", "and", "also", "potently", "blocked", "HIV-1", "replication", "." ]
[ 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12247
[ "T", "cells", "therefore", "can", "become", "competent", "for", "HIV-1", "replication", "by", "control", "of", "regulated", "host", "factors", "such", "as", "the", "NFATc", "transcription", "factor", "." ]
[ 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 0 ]
12248
[ "The", "host", "mechanisms", "regulated", "by", "such", "permissivity", "factors", "are", "potential", "targets", "for", "anti-HIV-1", "therapy", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12249
[ "Regulation", "of", "NF-kappa", "B", ",", "AP-1", ",", "NFAT", ",", "and", "STAT1", "nuclear", "import", "in", "T", "lymphocytes", "by", "noninvasive", "delivery", "of", "peptide", "carrying", "the", "nuclear", "localization", "sequence", "of", "NF-kappa", "B", "p50", "." ]
[ 0, 0, 9, 10, 0, 9, 0, 9, 0, 0, 9, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 0 ]
12250
[ "Activation", "of", "T", "lymphocytes", "by", "Ags", "or", "cytokines", "results", "in", "translocation", "of", "the", "transcription", "factors", "NF-kappa", "B", ",", "AP-1", ",", "NFAT", ",", "and", "STAT", "from", "the", "cytoplasm", "into", "the", "nucleus", "." ]
[ 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 10, 0, 9, 0, 9, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0 ]
12251
[ "The", "first", "step", "in", "the", "nuclear", "import", "process", "is", "recognition", "of", "a", "nuclear", "localization", "sequence", "(", "NLS", ")", "within", "the", "karyophilic", "protein", "by", "a", "cytoplasmic", "receptor", "such", "as", "the", "importin", "(", "karyopherin", ")", "-alpha", "subunit", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 10, 10, 10, 0 ]
12252
[ "The", "NLSs", "of", "NF-kappa", "B", ",", "AP-1", ",", "and", "NFAT", "differ", "and", "the", "NLS", "of", "STAT1", "has", "not", "yet", "been", "identified", "." ]
[ 0, 0, 0, 9, 10, 0, 9, 0, 0, 9, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0 ]
12253
[ "Herein", "we", "demonstrate", "that", "the", "inducible", "nuclear", "import", "of", "NF-kappa", "B", ",", "AP-1", ",", "NFAT", ",", "and", "STAT1", "in", "Jurkat", "T", "lymphocytes", "is", "significantly", "inhibited", "by", "a", "cell-permeable", "peptide", "carrying", "the", "NLS", "of", "the", "NF-kappa", "B", "p50", "subunit", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 9, 0, 9, 0, 0, 9, 0, 5, 6, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 10, 0 ]
12254
[ "NLS", "peptide-mediated", "disruption", "of", "the", "nuclear", "import", "of", "these", "transcription", "factors", "results", "in", "inhibition", "of", "I", "kappa", "B", "alpha", "and", "IL-2", "gene", "expression", ",", "processes", "dependent", "on", "NF-kappa", "B", "or", "the", "combination", "of", "NF-kappa", "B", ",", "AP-1", ",", "and", "NFAT", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 0, 1, 2, 0, 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 9, 10, 0, 9, 0, 0, 9, 0 ]
12255
[ "Further", ",", "we", "show", "that", "inhibitory", "NLS", "peptide", "interacts", "in", "vitro", "with", "a", "cytoplasmic", "NLS", "receptor", "complex", "comprised", "of", "the", "Rch1/importin", "(", "karyopherin", ")", "-beta", "heterodimer", "expressed", "in", "Jurkat", "T", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 10, 10, 10, 0, 0, 5, 6, 6, 0 ]
12256
[ "Taken", "together", ",", "these", "data", "indicate", "that", "the", "inducible", "nuclear", "import", "of", "NF-kappa", "B", ",", "AP-1", ",", "NFAT", ",", "and", "STAT1", "in", "Jurkat", "T", "cells", "can", "be", "regulated", "by", "NLS", "peptide", "delivered", "noninvasively", "to", "the", "cytoplasm", "of", "Jurkat", "T", "cells", "to", "target", "members", "of", "the", "importin", "(", "karyopherin", ")", "-alpha", "beta", "NLS", "receptor", "complex", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 0, 9, 0, 9, 0, 0, 9, 0, 5, 6, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 5, 6, 6, 0, 0, 0, 0, 0, 9, 10, 10, 10, 10, 10, 10, 10, 10, 0 ]
12257
[ "Membrane-associated", "lymphotoxin", "on", "natural", "killer", "cells", "activates", "endothelial", "cells", "via", "an", "NF-kappaB", "-dependent", "pathway", "." ]
[ 0, 0, 0, 7, 8, 8, 0, 7, 8, 0, 0, 9, 0, 0, 0 ]
12258
[ "BACKGROUND", ":", "Inhibition", "of", "complement", "in", "small", "animal", "models", "of", "xenotransplantation", "has", "demonstrated", "graft", "infiltration", "with", "natural", "killer", "(", "NK", ")", "cells", "and", "monocytes", "associated", "with", "endothelial", "cell", "(", "EC", ")", "activation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 8, 8, 8, 8, 0, 0, 0, 0, 7, 8, 0, 7, 0, 0, 0 ]
12259
[ "We", "have", "previously", "demonstrated", "that", "human", "NK", "cells", "activate", "porcine", "EC", "in", "vitro", ",", "which", "results", "in", "adhesion", "molecule", "expression", "and", "cytokine", "secretion", "." ]
[ 0, 0, 0, 0, 0, 7, 8, 8, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12260
[ "In", "this", "study", ",", "we", "used", "the", "NK", "cell", "line", "NK92", "to", "define", "the", "molecular", "and", "cellular", "basis", "of", "NK", "cell-mediated", "EC", "activation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 5, 6, 6, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0 ]
12261
[ "METHODS", ":", "EC", "were", "transfected", "with", "either", "reporter", "constructs", "containing", "the", "luciferase", "gene", "driven", "either", "by", "E-selectin", "or", "interleukin", "(", "IL", ")", "-8", "promoters", "or", "a", "synthetic", "NF-kappaB-dependent", "promoter", "." ]
[ 0, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 1, 0, 1, 2, 2, 2, 2, 2, 0, 0, 0, 1, 2, 0 ]
12262
[ "In", "addition", ",", "a", "dominant-negative", "mutant", "tumor", "necrosis", "factor", "receptor", "I", "(", "TNFRI", ")", "expression", "vector", "was", "co-transfected", "in", "inhibition", "studies", "." ]
[ 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 0, 0, 0, 0, 0 ]
12263
[ "Forty-eight", "hours", "after", "transfection", ",", "EC", "were", "stimulated", "with", "NK", "cells", "or", "NK", "cell", "membrane", "extracts", "for", "7", "hr", "and", "activation", "was", "measured", "by", "a", "luciferase", "assay", "." ]
[ 0, 0, 0, 0, 0, 7, 0, 0, 0, 7, 8, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0 ]
12264
[ "RESULTS", ":", "Co-culture", "of", "NK", "cells", "with", "transfected", "EC", "enhanced", "E-selectin", ",", "IL-8", ",", "and", "NF-kappaB", "-dependent", "promoter", "activity", "." ]
[ 0, 0, 0, 0, 7, 8, 0, 0, 7, 0, 1, 0, 1, 0, 0, 9, 10, 10, 0, 0 ]
12265
[ "NK", "cell", "membrane", "extracts", "retained", "the", "capacity", "to", "activate", "EC", "and", "induced", "nuclear", "translocation", "of", "NF-kappaB", "(", "p50", "and", "p65", ")", "." ]
[ 7, 8, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 9, 0, 9, 0, 9, 0, 0 ]
12266
[ "Western", "blotting", "of", "NK", "cell", "and", "membrane", "extracts", "detected", "the", "presence", "of", "Lymphotoxin-alpha", "(", "LTalpha", ")", "but", "not", "tumor", "necrosis", "factor-alpha", "." ]
[ 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 0, 0, 0, 9, 10, 10, 0 ]
12267
[ "Furthermore", ",", "LTalpha", "was", "secreted", "in", "NK", ":", "EC", "co-cultures", "." ]
[ 0, 0, 9, 0, 0, 0, 0, 0, 7, 0, 0 ]
12268
[ "Co-transfection", "with", "dominant-negative", "mutant", "TNFRI", "inhibited", "EC", "activation", "by", "NK", "cell", "membrane", "extracts", "and", "by", "NK", "cells", "by", "80", "%", "and", "47", "%", ",", "respectively", "." ]
[ 0, 0, 0, 0, 9, 0, 7, 0, 0, 7, 8, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12269
[ "The", "same", "pattern", "of", "inhibition", "was", "observed", "using", "anti-human", "LT", "sera", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12270
[ "CONCLUSIONS", ":", "Human", "NK", "cell", "membrane-bound", "LT", "signals", "across", "species", "via", "TNFRI", ",", "leading", "to", "NF-kappaB", "nuclear", "translocation", "and", "transcription", "of", "E-selectin", "and", "IL-8", ",", "which", "results", "in", "EC", "activation", "." ]
[ 0, 0, 7, 8, 8, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 9, 0, 0, 0, 0, 0, 9, 0, 9, 0, 0, 0, 0, 7, 0, 0 ]
12271
[ "The", "discrepancy", "in", "the", "degree", "of", "inhibition", "by", "membrane", "extracts", "and", "NK", "cells", "with", "mutant", "TNFRI", "suggests", "that", "additional", "pathways", "are", "utilized", "by", "NK", "cells", "to", "activate", "EC" ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 7 ]
12272
[ "Ras", "-dependent", ",", "Ca2+-stimulated", "activation", "of", "nuclear", "factor", "of", "activated", "T", "cells", "by", "a", "constitutively", "active", "Cbl", "mutant", "in", "T", "cells", "." ]
[ 9, 0, 0, 0, 0, 0, 9, 10, 10, 10, 10, 10, 0, 0, 0, 0, 9, 0, 0, 7, 8, 0 ]
12273
[ "T", "cell", "receptor", "(", "TCR", ")", "stimulation", "induces", "rapid", "tyrosine", "phosphorylation", "of", "cellular", "proteins", ",", "including", "Cbl", ",", "a", "protooncogene", "product", "whose", "function", "remains", "unclear", "." ]
[ 9, 10, 10, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12274
[ "As", "a", "first", "step", "toward", "elucidating", "the", "function", "of", "Cbl", "in", "TCR", "-initiated", "signaling", ",", "we", "evaluated", "the", "ability", "of", "wild-type", "Cbl", "or", "a", "transforming", "Cbl", "mutant", "(", "70Z/3", ")", "to", "induce", "transcriptional", "activation", "of", "a", "nuclear", "factor", "of", "activated", "T", "cells", "(", "NFAT", ")", "element", "derived", "from", "the", "interleukin", "2", "(", "IL2", ")", "promoter", "in", "transiently", "cotransfected", "Jurkat-TAg", "T", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 0, 0, 1, 2, 2, 2, 2, 2, 0, 0, 0, 5, 6, 6, 0 ]
12275
[ "70Z/3", ",", "but", "not", "Cbl", ",", "caused", "NFAT", "activation", "which", "was", "significantly", "enhanced", "by", "stimulation", "with", "calcium", "ionophore", ",", "and", "was", "drastically", "reduced", "by", "cyclosporin", "A", "pretreatment", "." ]
[ 0, 0, 0, 0, 9, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12276
[ "A", "point", "mutation", "of", "a", "potential", "phosphatidylinositol", "3-kinase", "(", "PI3-K", ")", "binding", "site", "(", "Y731EAM", "to", "Y731EAC", ")", "in", "70Z/3", "disrupted", "the", "association", "of", "PI3-K", "with", "70Z/3", ",", "but", "did", "not", "reduce", "the", "induction", "of", "NFAT", "activity", ",", "suggesting", "that", "the", "interaction", "between", "Cbl", "and", "PI3-K", "is", "not", "required", "in", "the", "70Z/3", "-mediated", "induction", "of", "NFAT", "." ]
[ 0, 0, 0, 0, 0, 0, 1, 2, 2, 2, 2, 2, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 9, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0 ]
12277
[ "Additional", "mapping", "studies", "indicated", "that", "defined", "deletions", "of", "C-terminal", "70Z/3", "sequences", "affected", "to", "a", "variable", "degree", "its", "ability", "to", "stimulate", "NFAT", "activity", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0 ]
12278
[ "Strikingly", ",", "deletion", "of", "346", "C-terminal", "residues", "augmented", "this", "activity", ",", "whereas", "removal", "of", "20", "additional", "residues", "abolished", "it", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12279
[ "Coexpression", "of", "dominant", "negative", "Ras", "abrogated", "the", "basal", "or", "ionomycin-stimulated", ",", "70Z/3", "-mediated", "NFAT", "activation", ",", "suggesting", "a", "functional", "Ras", "is", "required", "for", "this", "activation", "." ]
[ 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0 ]
12280
[ "These", "results", "implicate", "Cbl", "in", "Ras", "-dependent", "signaling", "pathways", "which", "lead", "to", "NFAT", "activation", "." ]
[ 0, 0, 0, 9, 0, 9, 0, 0, 0, 0, 0, 0, 9, 0, 0 ]
12281
[ "Requirement", "of", "prestimulated", "THP-1", "monocytic", "cells", "for", "endothelial", "cell", "activation", "." ]
[ 0, 0, 0, 5, 6, 6, 0, 7, 8, 0, 0 ]
12282
[ "Involvement", "of", "TNF", "alpha", "." ]
[ 0, 0, 9, 10, 0 ]
12283
[ "Blood", "monocytes", "spontaneously", "activate", "endothelial", "cells", "in", "culture", ",", "leading", "to", "adhesion", "of", "monocytic", "cells", "onto", "the", "endothelial", "surface", "and", "overproduction", "of", "endothelial", "proteins", "such", "as", "von", "Willebrand", "factor", "(", "vWf", ")", "and", "plasminogen", "activator", "inhibitor", "type", "1", "(", "PAI-1", ")", "." ]
[ 7, 8, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 7, 8, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 10, 10, 0, 9, 0, 0, 9, 10, 10, 10, 10, 0, 9, 0, 0 ]
12284
[ "To", "overcome", "the", "difficulty", "in", "obtaining", "quiescent", "monocytes", ",", "we", "studied", "the", "ability", "of", "promonocytic", "THP-1", "cells", "to", "activate", "endothelial", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 5, 6, 6, 0, 0, 7, 8, 0 ]
12285
[ "Lipopolysaccharide", "(", "LPS", ")", "-prestimulated", "and", "untreated", "THP-1", "cells", "were", "cocultured", "with", "resting", "human", "umbilical", "vein", "endothelial", "cells", "(", "HUVEC", ")", "for", "3", "and", "24", "h", "in", "the", "presence", "of", "colimycin", "to", "neutralize", "LPS", "traces", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 5, 6, 0, 0, 0, 0, 7, 8, 8, 8, 8, 0, 7, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12286
[ "Addition", "of", "untreated", "THP-1", "cells", "had", "little", "effect", "on", "HUVEC", "adhesiveness", "." ]
[ 0, 0, 0, 5, 6, 0, 0, 0, 0, 7, 0, 0 ]
12287
[ "Addition", "of", "prestimulated", "THP-1", "cells", "was", "followed", "by", "a", "noticeable", "adhesion", "after", "3", "h", "which", "reversed", "to", "basal", "values", "within", "24", "h", "." ]
[ 0, 0, 0, 5, 6, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 ]
12288
[ "Under", "these", "conditions", "HUVEC", "adhesion", "molecules", ",", "E-selectin", ",", "VCAM-1", "and", "ICAM-1", ",", "were", "increased", "at", "3", "h", "with", "only", "ICAM-1", "remaining", "overexpressed", "at", "24", "h", "." ]
[ 0, 0, 0, 7, 0, 0, 0, 9, 0, 9, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0 ]
12289
[ "Diffusible", "endothelial", "proteins", "such", "as", "soluble", "E-selectin", ",", "PAI-1", "and", "vWf", "to", "a", "minimal", "extent", ",", "increased", "in", "supernatants", "from", "HUVEC", "cocultured", "for", "24", "h", "with", "prestimulated", "THP-1", "cells", "." ]
[ 0, 0, 0, 0, 0, 0, 9, 0, 9, 0, 9, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 0, 0, 5, 6, 0 ]
12290
[ "In", "those", "cocultures", ",", "TNF", "alpha", "concentrations", "peaked", "at", "3", "h", "whereas", "IL-1", "beta", "levels", "progressively", "rose", "until", "24", "h", "." ]
[ 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 9, 10, 0, 0, 0, 0, 0, 0, 0 ]
12291
[ "Addition", "of", "an", "anti-TNF", "alpha", "antibody", "decreased", "by", "40", "%", "E-selectin", "and", "ICAM-1", "induction", "and", "suppressed", "PAI-1", "overproduction", "with", "a", "weak", "effect", "on", "vWf", "." ]
[ 0, 0, 0, 9, 10, 10, 0, 0, 0, 0, 9, 0, 9, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 9, 0 ]
12292
[ "An", "anti-IL-1", "beta", "antibody", "had", "negligible", "effects", "on", "HUVEC", "adhesion", "molecules", ",", "PAI-1", "or", "vWf", "production", "." ]
[ 0, 9, 10, 10, 0, 0, 0, 0, 7, 0, 0, 0, 9, 0, 9, 0, 0 ]
12293
[ "These", "results", "provide", "evidence", "that", "promonocytic", "THP-1", "cells", "require", "prestimulation", "in", "order", "to", "activate", "HUVEC", "and", "that", "TNF", "alpha", "contributes", "to", "this", "phenomenon", "." ]
[ 0, 0, 0, 0, 0, 5, 6, 6, 0, 0, 0, 0, 0, 0, 7, 0, 0, 9, 10, 0, 0, 0, 0, 0 ]
12294
[ "Engagement", "of", "the", "Lewis", "X", "antigen", "(", "CD15", ")", "results", "in", "monocyte", "activation", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 7, 0, 0 ]
12295
[ "We", "previously", "reported", "that", "monocyte", "adhesion", "to", "tumor", "necrosis", "factor-alpha", "(", "TNF-alpha", ")", "-treated", "endothelial", "cells", "increased", "expression", "of", "tissue", "factor", "and", "CD36", "on", "monocytes", "." ]
[ 0, 0, 0, 0, 7, 0, 0, 9, 10, 10, 0, 9, 0, 0, 7, 8, 0, 0, 0, 9, 10, 0, 9, 0, 7, 0 ]
12296
[ "Using", "immunological", "cross-linking", "to", "mimic", "receptor", "engagement", "by", "natural", "ligands", ",", "we", "now", "show", "that", "CD15", "(", "Lewis", "X", ")", ",", "a", "monocyte", "counter-receptor", "for", "endothelial", "selectins", "may", "participate", "in", "this", "response", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 9, 0, 0, 0, 0, 0, 0 ]
12297
[ "We", "used", "cytokine", "production", "as", "a", "readout", "for", "monocyte", "activation", "and", "found", "that", "CD15", "cross-linking", "induced", "TNF-alpha", "release", "from", "peripheral", "blood", "monocytes", "and", "cells", "from", "the", "monocytic", "cell", "line", "MM6", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 7, 0, 0, 0, 0, 9, 0, 0, 9, 0, 0, 7, 8, 8, 0, 0, 0, 0, 5, 6, 6, 6, 0 ]
12298
[ "Quantitative", "reverse", "transcriptase", "-polymerase", "chain", "reaction", "(", "RT-PCR", ")", "showed", "an", "increase", "in", "steady-state", "TNF-alpha", "mRNA", "after", "3", "to", "4", "hours", "of", "cross-linking", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 3, 4, 0, 0, 0, 0, 0, 0, 0, 0 ]
12299
[ "CD15", "cross-linking", "also", "concomitantly", "increased", "interleukin-1", "beta", "(", "IL-1", "beta", ")", "mRNA", ",", "while", "no", "apparent", "change", "was", "observed", "in", "the", "levels", "of", "beta-actin", "mRNA", ",", "indicating", "specificity", "." ]
[ 9, 0, 0, 0, 0, 3, 4, 4, 4, 4, 4, 4, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 3, 4, 0, 0, 0, 0 ]
12300
[ "To", "examine", "transcriptional", "regulation", "of", "cytokine", "genes", "by", "CD15", "engagement", ",", "a", "CAT", "plasmid", "reporter", "construct", "containing", "IL-1", "beta", "promoter/enhancer", "sequences", "was", "introduced", "into", "MM6", "." ]
[ 0, 0, 0, 0, 0, 0, 0, 0, 9, 0, 0, 0, 1, 2, 2, 2, 0, 1, 2, 2, 2, 0, 0, 0, 5, 0 ]