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6430f67a_t__PARK7_002__ENST00000338639___UniProt | [Name] PARK7-003 [Transcript ID] ENST00000377493 [bp] 795 [Protein] 169aa [Translation ID] ENSP00000466242 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | K7ELW0 | [
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] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PARK7-002 (ENST00000338639) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000116288;r=1:8021954-8045310;t=ENST00000338639 | 27/1438042988051.33_20150728002308-00004-ip-10-236-191-2_432467496_0.json |
6430f67a_t__PARK7_002__ENST00000338639___UniProt | [Name] PARK7-010 [Transcript ID] ENST00000469225 [bp] 711 [Protein] 160aa [Translation ID] ENSP00000466756 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt] | K7EN27 | [
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] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PARK7-002 (ENST00000338639) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000116288;r=1:8021954-8045310;t=ENST00000338639 | 27/1438042988051.33_20150728002308-00004-ip-10-236-191-2_432467496_0.json |
6430f67a_t__PARK7_002__ENST00000338639___UniProt | [Name] PARK7-004 [Transcript ID] ENST00000493373 [bp] 624 [Protein] 189aa [Translation ID] ENSP00000465404 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [UniProt] | Q99497 V9HWC2 | [
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] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PARK7-002 (ENST00000338639) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000116288;r=1:8021954-8045310;t=ENST00000338639 | 27/1438042988051.33_20150728002308-00004-ip-10-236-191-2_432467496_0.json |
6430f67a_t__PARK7_002__ENST00000338639___UniProt | [Name] PARK7-009 [Transcript ID] ENST00000497113 [bp] 670 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt] | - | [
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] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PARK7-002 (ENST00000338639) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000116288;r=1:8021954-8045310;t=ENST00000338639 | 27/1438042988051.33_20150728002308-00004-ip-10-236-191-2_432467496_0.json |
6430f67a_t__PARK7_002__ENST00000338639___UniProt | [Name] PARK7-008 [Transcript ID] ENST00000465354 [bp] 949 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt] | - | [
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] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PARK7-002 (ENST00000338639) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000116288;r=1:8021954-8045310;t=ENST00000338639 | 27/1438042988051.33_20150728002308-00004-ip-10-236-191-2_432467496_0.json |
6430f67a_t__PARK7_002__ENST00000338639___UniProt | [Name] PARK7-007 [Transcript ID] ENST00000460192 [bp] 567 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt] | - | [
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] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PARK7-002 (ENST00000338639) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000116288;r=1:8021954-8045310;t=ENST00000338639 | 27/1438042988051.33_20150728002308-00004-ip-10-236-191-2_432467496_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-004 [Transcript ID] ENST00000421587 [bp] 8204 [Protein] 897aa [Translation ID] ENSP00000400526 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS48094 [UniProt] O14936 [RefSeq] NM_001126055 NP_001119527 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-005 [Transcript ID] ENST00000378166 [bp] 3123 [Protein] 921aa [Translation ID] ENSP00000367408 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14257 [UniProt] O14936 [RefSeq] NM_003688 NP_003679 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-013 [Transcript ID] ENST00000442742 [bp] 2800 [Protein] 898aa [Translation ID] ENSP00000398007 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS48095 [UniProt] O14936 [RefSeq] NM_001126054 NP_001119526 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-007 [Transcript ID] ENST00000378163 [bp] 4411 [Protein] 926aa [Translation ID] ENSP00000367405 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O14936 [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-001 [Transcript ID] ENST00000378158 [bp] 3848 [Protein] 909aa [Translation ID] ENSP00000367400 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O14936 [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-002 [Transcript ID] ENST00000378179 [bp] 2809 [Protein] 518aa [Translation ID] ENSP00000367421 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q5JS72 [RefSeq] - [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-006 [Transcript ID] ENST00000378154 [bp] 2494 [Protein] 590aa [Translation ID] ENSP00000367396 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q5JS74 [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-012 [Transcript ID] ENST00000378168 [bp] 2017 [Protein] 381aa [Translation ID] ENSP00000367410 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q5JS79 [RefSeq] - [Flags] | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-003 [Transcript ID] ENST00000472704 [bp] 759 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-010 [Transcript ID] ENST00000486402 [bp] 733 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-009 [Transcript ID] ENST00000477823 [bp] 640 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-008 [Transcript ID] ENST00000468986 [bp] 507 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
784c4f4b_pt__CASK_011__ENST00000469265___Flags | [Name] CASK-011 [Transcript ID] ENST00000469265 [bp] 404 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-001 [Transcript ID] ENST00000289081 [bp] 4585 [Protein] 558aa [Translation ID] ENSP00000289081 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS35071 [UniProt] A0A024R9N2 Q00597 [RefSeq] NM_000136 NP_000127 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-002 [Transcript ID] ENST00000375305 [bp] 4504 [Protein] 558aa [Translation ID] ENSP00000364454 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS35071 [UniProt] A0A024R9N2 Q00597 [RefSeq] NM_001243743 NP_001230672 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-201 [Transcript ID] ENST00000490972 [bp] 2709 [Protein] 492aa [Translation ID] ENSP00000479931 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75861 [UniProt] A0A087WW44 [RefSeq] NM_001243744 NP_001230673 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-004 [Transcript ID] ENST00000433829 [bp] 591 [Protein] 150aa [Translation ID] ENSP00000406908 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B1ALR7 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-003 [Transcript ID] ENST00000464653 [bp] 1644 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-008 [Transcript ID] ENST00000477942 [bp] 842 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-005 [Transcript ID] ENST00000474949 [bp] 841 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-006 [Transcript ID] ENST00000464627 [bp] 825 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-009 [Transcript ID] ENST00000480712 [bp] 680 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
2c46349c__Gene__FANCC__ENSG00000158169___Flags | [Name] FANCC-010 [Transcript ID] ENST00000493098 [bp] 360 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Flags | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000421587 [bp] 8204 [Protein] 897aa [Translation ID] ENSP00000400526 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS48094 [UniProt] O14936 [RefSeq] NM_001126055 NP_001119527 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Name] | CASK-004 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000378166 [bp] 3123 [Protein] 921aa [Translation ID] ENSP00000367408 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14257 [UniProt] O14936 [RefSeq] NM_003688 NP_003679 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Name] | CASK-005 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000442742 [bp] 2800 [Protein] 898aa [Translation ID] ENSP00000398007 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS48095 [UniProt] O14936 [RefSeq] NM_001126054 NP_001119526 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Name] | CASK-013 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000378163 [bp] 4411 [Protein] 926aa [Translation ID] ENSP00000367405 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O14936 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Name] | CASK-007 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000378158 [bp] 3848 [Protein] 909aa [Translation ID] ENSP00000367400 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O14936 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Name] | CASK-001 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000378179 [bp] 2809 [Protein] 518aa [Translation ID] ENSP00000367421 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q5JS72 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Name] | CASK-002 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000378154 [bp] 2494 [Protein] 590aa [Translation ID] ENSP00000367396 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q5JS74 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Name] | CASK-006 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000378168 [bp] 2017 [Protein] 381aa [Translation ID] ENSP00000367410 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q5JS79 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Name] | CASK-012 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000472704 [bp] 759 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Name] | CASK-003 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000486402 [bp] 733 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | CASK-010 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000477823 [bp] 640 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | CASK-009 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000468986 [bp] 507 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Name] | CASK-008 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7ed85f5e_pt__CASK_011__ENST00000469265___Name | [Transcript ID] ENST00000469265 [bp] 404 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | CASK-011 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CASK-011 (ENST00000469265) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000147044;r=X:41635728-41665431;t=ENST00000469265 | 27/1438042989826.86_20150728002309-00041-ip-10-236-191-2_436219237_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000289081 [bp] 4585 [Protein] 558aa [Translation ID] ENSP00000289081 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS35071 [UniProt] A0A024R9N2 Q00597 [RefSeq] NM_000136 NP_000127 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Name] | FANCC-001 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000375305 [bp] 4504 [Protein] 558aa [Translation ID] ENSP00000364454 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS35071 [UniProt] A0A024R9N2 Q00597 [RefSeq] NM_001243743 NP_001230672 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Name] | FANCC-002 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000490972 [bp] 2709 [Protein] 492aa [Translation ID] ENSP00000479931 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75861 [UniProt] A0A087WW44 [RefSeq] NM_001243744 NP_001230673 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Name] | FANCC-201 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000433829 [bp] 591 [Protein] 150aa [Translation ID] ENSP00000406908 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B1ALR7 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | FANCC-004 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000464653 [bp] 1644 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Name] | FANCC-003 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000477942 [bp] 842 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | FANCC-008 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000474949 [bp] 841 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Name] | FANCC-005 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000464627 [bp] 825 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | FANCC-006 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000480712 [bp] 680 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | FANCC-009 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
7150a7e9__Gene__FANCC__ENSG00000158169___Name | [Transcript ID] ENST00000493098 [bp] 360 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name] | FANCC-010 | [
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] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Name | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-001 [Transcript ID] ENST00000308677 [bp] 2677 [Protein] 351aa [Translation ID] ENSP00000309591 [CCDS] CCDS12304 [UniProt] A0A024R7J0 P17612 [RefSeq] NM_002730 NP_002721 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-003 [Transcript ID] ENST00000589994 [bp] 1127 [Protein] 343aa [Translation ID] ENSP00000466651 [CCDS] CCDS12305 [UniProt] P17612 [RefSeq] NM_207518 NP_997401 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-002 [Transcript ID] ENST00000590853 [bp] 1101 [Protein] 124aa [Translation ID] ENSP00000466976 [CCDS] - [UniProt] K7ENJ5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-006 [Transcript ID] ENST00000593092 [bp] 922 [Protein] 207aa [Translation ID] ENSP00000466289 [CCDS] - [UniProt] Q15136 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-010 [Transcript ID] ENST00000587372 [bp] 824 [Protein] 251aa [Translation ID] ENSP00000468352 [CCDS] - [UniProt] K7ERP6 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-008 [Transcript ID] ENST00000589284 [bp] 403 [Protein] 25aa [Translation ID] ENSP00000466660 [CCDS] - [UniProt] K7EMV1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-005 [Transcript ID] ENST00000350356 [bp] 3105 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-007 [Transcript ID] ENST00000587533 [bp] 2095 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-004 [Transcript ID] ENST00000536649 [bp] 1524 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
bc76df12___PRKACA_008__ENST00000589284___Biotype | [Name] PRKACA-009 [Transcript ID] ENST00000588209 [bp] 942 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PRKACA-008 (ENST00000589284) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000072062;r=19:14102901-14118084;t=ENST00000589284 | 27/1438042990112.92_20150728002310-00102-ip-10-236-191-2_430720033_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-001 [Transcript ID] ENST00000289081 [bp] 4585 [Protein] 558aa [Translation ID] ENSP00000289081 [CCDS] CCDS35071 [UniProt] A0A024R9N2 Q00597 [RefSeq] NM_000136 NP_000127 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-002 [Transcript ID] ENST00000375305 [bp] 4504 [Protein] 558aa [Translation ID] ENSP00000364454 [CCDS] CCDS35071 [UniProt] A0A024R9N2 Q00597 [RefSeq] NM_001243743 NP_001230672 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-201 [Transcript ID] ENST00000490972 [bp] 2709 [Protein] 492aa [Translation ID] ENSP00000479931 [CCDS] CCDS75861 [UniProt] A0A087WW44 [RefSeq] NM_001243744 NP_001230673 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-004 [Transcript ID] ENST00000433829 [bp] 591 [Protein] 150aa [Translation ID] ENSP00000406908 [CCDS] - [UniProt] B1ALR7 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-003 [Transcript ID] ENST00000464653 [bp] 1644 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-008 [Transcript ID] ENST00000477942 [bp] 842 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-005 [Transcript ID] ENST00000474949 [bp] 841 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-006 [Transcript ID] ENST00000464627 [bp] 825 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-009 [Transcript ID] ENST00000480712 [bp] 680 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
d0e4d703__Gene__FANCC__ENSG00000158169___Biotype | [Name] FANCC-010 [Transcript ID] ENST00000493098 [bp] 360 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Gene: FANCC (ENSG00000158169) | Biotype | http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000158169;r=9:95099054-95317709 | 27/1438042988051.33_20150728002308-00332-ip-10-236-191-2_423912093_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-209 [Transcript ID] ENST00000545257 [bp] 4092 [Protein] 476aa [Translation ID] ENSP00000440547 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS73196 [RefSeq] NM_001198525 NP_001185454 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt] | C6ZRJ7 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-201 [Transcript ID] ENST00000352065 [bp] 4029 [Protein] 459aa [Translation ID] ENSP00000344823 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS55729 [RefSeq] NM_001198527 NM_001198528 NP_001185456 NP_001185457 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [UniProt] | Q9NQB0 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-202 [Transcript ID] ENST00000355717 [bp] 4021 [Protein] 489aa [Translation ID] ENSP00000347949 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53578 [RefSeq] NM_001146283 NM_001146286 NP_001139755 NP_001139758 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | Q9NQB0 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-205 [Transcript ID] ENST00000536810 [bp] 3953 [Protein] 579aa [Translation ID] ENSP00000446238 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS73197 [RefSeq] NM_001146285 NP_001139757 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | C6ZRK5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-003 [Transcript ID] ENST00000369397 [bp] 3802 [Protein] 596aa [Translation ID] ENSP00000358404 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7576 [RefSeq] NM_030756 NP_110383 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [UniProt] | Q6FHW4 Q9NQB0 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-204 [Transcript ID] ENST00000534894 [bp] 3778 [Protein] 408aa [Translation ID] ENSP00000443626 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS73198 [RefSeq] NM_001198530 NP_001185459 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | A0A0A0MTL7 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-015 [Transcript ID] ENST00000627217 [bp] 3680 [Protein] 602aa [Translation ID] ENSP00000486891 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53577 [RefSeq] NM_001146274 NP_001139746 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt] | - | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-207 [Transcript ID] ENST00000542695 [bp] 4136 [Protein] 534aa [Translation ID] ENSP00000443883 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | C6ZRJ6 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-203 [Transcript ID] ENST00000355995 [bp] 4073 [Protein] 619aa [Translation ID] ENSP00000348274 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | Q9NQB0 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-208 [Transcript ID] ENST00000543371 [bp] 4037 [Protein] 607aa [Translation ID] ENSP00000444972 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt] | E2GH26 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-206 [Transcript ID] ENST00000538897 [bp] 4000 [Protein] 482aa [Translation ID] ENSP00000446172 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] NM_001146284 NM_001198529 NM_001198531 NP_001139756 NP_001185458 NP_001185460 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | Q9NQB0 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-014 [Transcript ID] ENST00000629706 [bp] 1755 [Protein] 584aa [Translation ID] ENSP00000487507 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] NM_001198526 NP_001185455 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt] | - | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-006 [Transcript ID] ENST00000369386 [bp] 1274 [Protein] 120aa [Translation ID] ENSP00000358393 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | Q5JRY3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-004 [Transcript ID] ENST00000349937 [bp] 1174 [Protein] 288aa [Translation ID] ENSP00000298692 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | Q5VVR8 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-001 [Transcript ID] ENST00000369395 [bp] 1041 [Protein] 317aa [Translation ID] ENSP00000358402 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | Q5VVR7 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-007 [Transcript ID] ENST00000369389 [bp] 738 [Protein] 176aa [Translation ID] ENSP00000358396 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt] | Q5JRY4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-002 [Transcript ID] ENST00000346198 [bp] 667 [Protein] 222aa [Translation ID] ENSP00000345640 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt] | Q5VVR5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-010 [Transcript ID] ENST00000277945 [bp] 620 [Protein] 207aa [Translation ID] ENSP00000277945 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [UniProt] | Q5JRY5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-013 [Transcript ID] ENST00000470254 [bp] 768 [Protein] 108aa [Translation ID] ENSP00000435694 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [UniProt] | H0YEE5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-011 [Transcript ID] ENST00000466338 [bp] 1026 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt] | - | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-009 [Transcript ID] ENST00000476887 [bp] 836 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt] | - | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-012 [Transcript ID] ENST00000494353 [bp] 500 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt] | - | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-005 [Transcript ID] ENST00000471569 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [UniProt] | - | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
4cd37285___TCF7L2_004__ENST00000349937___UniProt | [Name] TCF7L2-008 [Transcript ID] ENST00000480888 [bp] 182 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [UniProt] | - | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF7L2-004 (ENST00000349937) | UniProt | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148737;r=10:112950452-113146103;t=ENST00000349937 | 27/1438042989826.86_20150728002309-00180-ip-10-236-191-2_441742075_0.json |
645e8f85_pt__SDHA_001__ENST00000264932___Flags | [Name] SDHA-001 [Transcript ID] ENST00000264932 [bp] 2390 [Protein] 664aa [Translation ID] ENSP00000264932 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3853 [UniProt] A0A024QZ30 P31040 [RefSeq] NM_004168 NP_004159 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: SDHA-001 (ENST00000264932) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000073578;r=5:218241-256700;t=ENST00000264932 | 27/1438042989826.86_20150728002309-00134-ip-10-236-191-2_429025473_0.json |
645e8f85_pt__SDHA_001__ENST00000264932___Flags | [Name] SDHA-004 [Transcript ID] ENST00000510361 [bp] 2148 [Protein] 616aa [Translation ID] ENSP00000427703 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS77992 [UniProt] P31040 [RefSeq] NM_001294332 NP_001281261 [Flags] | Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: SDHA-001 (ENST00000264932) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000073578;r=5:218241-256700;t=ENST00000264932 | 27/1438042989826.86_20150728002309-00134-ip-10-236-191-2_429025473_0.json |
645e8f85_pt__SDHA_001__ENST00000264932___Flags | [Name] SDHA-002 [Transcript ID] ENST00000504309 [bp] 2067 [Protein] 583aa [Translation ID] ENSP00000426514 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] D6RFM5 [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: SDHA-001 (ENST00000264932) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000073578;r=5:218241-256700;t=ENST00000264932 | 27/1438042989826.86_20150728002309-00134-ip-10-236-191-2_429025473_0.json |
645e8f85_pt__SDHA_001__ENST00000264932___Flags | [Name] SDHA-201 [Transcript ID] ENST00000617470 [bp] 1952 [Protein] 519aa [Translation ID] ENSP00000484230 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X1I3 [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: SDHA-001 (ENST00000264932) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000073578;r=5:218241-256700;t=ENST00000264932 | 27/1438042989826.86_20150728002309-00134-ip-10-236-191-2_429025473_0.json |
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