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36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-001 [Transcript ID] ENST00000341928 [bp] 4706 [Protein] 1087aa [Translation ID] ENSP00000343158 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11838 [UniProt] Q9Y2J2 [RefSeq] NM_012307 NP_036439 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-203 [Transcript ID] ENST00000544123 [bp] 3972 [Protein] 883aa [Translation ID] ENSP00000441174 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS62382 [UniProt] Q9Y2J2 [RefSeq] NM_001281533 NP_001268462 [Flags] | Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-004 [Transcript ID] ENST00000540638 [bp] 3370 [Protein] 865aa [Translation ID] ENSP00000442091 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS62381 [UniProt] Q9Y2J2 [RefSeq] NM_001281534 NP_001268463 [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-201 [Transcript ID] ENST00000342933 [bp] 4270 [Protein] 918aa [Translation ID] ENSP00000341138 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A0A0MRA8 [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-202 [Transcript ID] ENST00000400111 [bp] 3304 [Protein] 503aa [Translation ID] ENSP00000382981 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B2RB02 [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-002 [Transcript ID] ENST00000545076 [bp] 3190 [Protein] 756aa [Translation ID] ENSP00000488626 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A8K968 [RefSeq] NM_001281535 NP_001268464 [Flags] | Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-023 [Transcript ID] ENST00000578524 [bp] 973 [Protein] 325aa [Translation ID] ENSP00000488647 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags] | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-032 [Transcript ID] ENST00000579951 [bp] 596 [Protein] 110aa [Translation ID] ENSP00000464570 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QS83 [RefSeq] - [Flags] | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-024 [Transcript ID] ENST00000579271 [bp] 591 [Protein] 197aa [Translation ID] ENSP00000488095 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags] | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-021 [Transcript ID] ENST00000581387 [bp] 583 [Protein] 194aa [Translation ID] ENSP00000487915 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags] | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-014 [Transcript ID] ENST00000581833 [bp] 572 [Protein] 117aa [Translation ID] ENSP00000461937 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3KRD1 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-022 [Transcript ID] ENST00000580647 [bp] 569 [Protein] 190aa [Translation ID] ENSP00000488037 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags] | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-013 [Transcript ID] ENST00000585142 [bp] 567 [Protein] 113aa [Translation ID] ENSP00000463289 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QKY2 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-025 [Transcript ID] ENST00000580316 [bp] 564 [Protein] 188aa [Translation ID] ENSP00000487780 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags] | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-009 [Transcript ID] ENST00000578503 [bp] 553 [Protein] 162aa [Translation ID] ENSP00000464533 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QS55 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-017 [Transcript ID] ENST00000582592 [bp] 553 [Protein] 96aa [Translation ID] ENSP00000463707 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QLU5 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-011 [Transcript ID] ENST00000580989 [bp] 552 [Protein] 125aa [Translation ID] ENSP00000463122 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QKK4 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-010 [Transcript ID] ENST00000582703 [bp] 551 [Protein] 91aa [Translation ID] ENSP00000462338 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3KS70 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-020 [Transcript ID] ENST00000581292 [bp] 551 [Protein] 184aa [Translation ID] ENSP00000487786 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags] | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-012 [Transcript ID] ENST00000584651 [bp] 546 [Protein] 162aa [Translation ID] ENSP00000462692 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QS55 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-019 [Transcript ID] ENST00000584670 [bp] 542 [Protein] 147aa [Translation ID] ENSP00000462783 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3KT37 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-015 [Transcript ID] ENST00000584015 [bp] 500 [Protein] 127aa [Translation ID] ENSP00000464148 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QR33 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-033 [Transcript ID] ENST00000580179 [bp] 496 [Protein] 79aa [Translation ID] ENSP00000464336 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QRQ6 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-007 [Transcript ID] ENST00000580308 [bp] 492 [Protein] 127aa [Translation ID] ENSP00000464020 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QR33 [RefSeq] - [Flags] | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-034 [Transcript ID] ENST00000542652 [bp] 3261 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-026 [Transcript ID] ENST00000582729 [bp] 663 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-016 [Transcript ID] ENST00000578431 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-028 [Transcript ID] ENST00000578395 [bp] 561 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-030 [Transcript ID] ENST00000578196 [bp] 549 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-005 [Transcript ID] ENST00000581454 [bp] 484 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-029 [Transcript ID] ENST00000581757 [bp] 481 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-018 [Transcript ID] ENST00000578432 [bp] 229 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-003 [Transcript ID] ENST00000578618 [bp] 4908 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-031 [Transcript ID] ENST00000584055 [bp] 731 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
36ef7ba5__EPB41L3_201__ENST00000342933___Flags | [Name] EPB41L3-006 [Transcript ID] ENST00000580866 [bp] 489 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags] | Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPB41L3-201 (ENST00000342933) | Flags | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000082397;r=18:5392381-5544310;t=ENST00000342933 | 28/1438042990112.92_20150728002310-00045-ip-10-236-191-2_437863649_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-001 [Transcript ID] ENST00000397938 [bp] 2654 [Protein] 656aa [Translation ID] ENSP00000381031 [CCDS] CCDS13851 [UniProt] Q01844 [RefSeq] NM_005243 NP_005234 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-002 [Transcript ID] ENST00000406548 [bp] 2207 [Protein] 655aa [Translation ID] ENSP00000385726 [CCDS] CCDS54513 [UniProt] Q01844 [RefSeq] NM_001163285 NP_001156757 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-021 [Transcript ID] ENST00000414183 [bp] 2189 [Protein] 661aa [Translation ID] ENSP00000400142 [CCDS] CCDS13852 [UniProt] Q01844 [RefSeq] NM_013986 NP_053733 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-008 [Transcript ID] ENST00000332035 [bp] 1989 [Protein] 600aa [Translation ID] ENSP00000331699 [CCDS] CCDS54514 [UniProt] Q01844 [RefSeq] NM_001163286 NP_001156758 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-004 [Transcript ID] ENST00000333395 [bp] 1265 [Protein] 354aa [Translation ID] ENSP00000327456 [CCDS] CCDS54512 [UniProt] Q01844 [RefSeq] NM_001163287 NP_001156759 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-201 [Transcript ID] ENST00000332050 [bp] 2552 [Protein] 620aa [Translation ID] ENSP00000330896 [CCDS] - [UniProt] C9JGE3 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-202 [Transcript ID] ENST00000629659 [bp] 2446 [Protein] 584aa [Translation ID] ENSP00000486709 [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-007 [Transcript ID] ENST00000331029 [bp] 2267 [Protein] 618aa [Translation ID] ENSP00000330516 [CCDS] - [UniProt] B0QYK0 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-019 [Transcript ID] ENST00000360091 [bp] 1289 [Protein] 308aa [Translation ID] ENSP00000353204 [CCDS] - [UniProt] H7BY36 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-013 [Transcript ID] ENST00000437155 [bp] 933 [Protein] 293aa [Translation ID] ENSP00000412670 [CCDS] - [UniProt] F8WC90 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-018 [Transcript ID] ENST00000455726 [bp] 710 [Protein] 233aa [Translation ID] ENSP00000393637 [CCDS] - [UniProt] B0QYJ7 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-017 [Transcript ID] ENST00000415761 [bp] 587 [Protein] 180aa [Translation ID] ENSP00000395200 [CCDS] - [UniProt] B0QYJ6 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-014 [Transcript ID] ENST00000447973 [bp] 582 [Protein] 166aa [Translation ID] ENSP00000405947 [CCDS] - [UniProt] B0QYJ4 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-016 [Transcript ID] ENST00000444626 [bp] 560 [Protein] 77aa [Translation ID] ENSP00000416171 [CCDS] - [UniProt] B0QYJ5 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-012 [Transcript ID] ENST00000436425 [bp] 553 [Protein] 156aa [Translation ID] ENSP00000406824 [CCDS] - [UniProt] B0QYJ3 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-005 [Transcript ID] ENST00000479135 [bp] 7285 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-006 [Transcript ID] ENST00000483415 [bp] 3231 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-009 [Transcript ID] ENST00000469669 [bp] 2630 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-011 [Transcript ID] ENST00000610553 [bp] 2300 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-010 [Transcript ID] ENST00000483629 [bp] 1818 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-015 [Transcript ID] ENST00000493426 [bp] 581 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
123bfafa_t__EWSR1_007__ENST00000331029___Biotype | [Name] EWSR1-003 [Transcript ID] ENST00000485037 [bp] 479 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: EWSR1-007 (ENST00000331029) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000182944;r=22:29268291-29300525;t=ENST00000331029 | 28/1438042990112.92_20150728002310-00176-ip-10-236-191-2_427436115_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-001 [Transcript ID] ENST00000219476 [bp] 6156 [Protein] 1807aa [Translation ID] ENSP00000219476 [CCDS] CCDS10458 [UniProt] P49815 [RefSeq] NM_000548 NP_000539 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-004 [Transcript ID] ENST00000350773 [bp] 5532 [Protein] 1784aa [Translation ID] ENSP00000344383 [CCDS] CCDS45384 [UniProt] P49815 [RefSeq] NM_001114382 NP_001107854 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-003 [Transcript ID] ENST00000401874 [bp] 5421 [Protein] 1740aa [Translation ID] ENSP00000384468 [CCDS] CCDS58408 [UniProt] P49815 X5D7Q2 [RefSeq] NM_001077183 NP_001070651 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-006 [Transcript ID] ENST00000568454 [bp] 5434 [Protein] 1751aa [Translation ID] ENSP00000454487 [CCDS] - [UniProt] H3BMQ0 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-017 [Transcript ID] ENST00000439673 [bp] 5287 [Protein] 1704aa [Translation ID] ENSP00000399232 [CCDS] - [UniProt] P49815 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-007 [Transcript ID] ENST00000382538 [bp] 5264 [Protein] 1692aa [Translation ID] ENSP00000371978 [CCDS] - [UniProt] P49815 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-019 [Transcript ID] ENST00000569110 [bp] 1687 [Protein] 535aa [Translation ID] ENSP00000455817 [CCDS] - [UniProt] H3BQK4 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-009 [Transcript ID] ENST00000467949 [bp] 590 [Protein] 196aa [Translation ID] ENSP00000454997 [CCDS] - [UniProt] H3BNT5 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-020 [Transcript ID] ENST00000432909 [bp] 374 [Protein] 125aa [Translation ID] ENSP00000387937 [CCDS] - [UniProt] C9JX95 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-002 [Transcript ID] ENST00000439117 [bp] 5073 [Protein] 108aa [Translation ID] ENSP00000406980 [CCDS] - [UniProt] Q5HYF7 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype] | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-014 [Transcript ID] ENST00000471143 [bp] 577 [Protein] 32aa [Translation ID] ENSP00000458541 [CCDS] - [UniProt] I3L134 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-015 [Transcript ID] ENST00000483020 [bp] 563 [Protein] 35aa [Translation ID] ENSP00000460310 [CCDS] - [UniProt] I3L3B1 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-021 [Transcript ID] ENST00000568566 [bp] 542 [Protein] 30aa [Translation ID] ENSP00000455997 [CCDS] - [UniProt] H3BQY7 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-024 [Transcript ID] ENST00000568366 [bp] 767 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-027 [Transcript ID] ENST00000562474 [bp] 589 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-005 [Transcript ID] ENST00000497886 [bp] 3248 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-016 [Transcript ID] ENST00000569930 [bp] 2621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-008 [Transcript ID] ENST00000461648 [bp] 1071 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-013 [Transcript ID] ENST00000463808 [bp] 842 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-026 [Transcript ID] ENST00000568692 [bp] 636 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-010 [Transcript ID] ENST00000463601 [bp] 600 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-012 [Transcript ID] ENST00000488675 [bp] 567 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-025 [Transcript ID] ENST00000561695 [bp] 555 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-023 [Transcript ID] ENST00000563346 [bp] 553 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-011 [Transcript ID] ENST00000490108 [bp] 482 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
ad5cf9c0_pt__TSC2_001__ENST00000219476___Biotype | [Name] TSC2-022 [Transcript ID] ENST00000568238 [bp] 422 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: TSC2-001 (ENST00000219476) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000103197;r=16:2047465-2088712;t=ENST00000219476 | 28/1438042990112.92_20150728002310-00198-ip-10-236-191-2_433253638_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-001 [Transcript ID] ENST00000359478 [bp] 2845 [Protein] 173aa [Translation ID] ENSP00000352455 [CCDS] CCDS8595 [UniProt] Q13361 [RefSeq] NM_003480 NP_003471 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-002 [Transcript ID] ENST00000433590 [bp] 2308 [Protein] 148aa [Translation ID] ENSP00000411997 [CCDS] CCDS76523 [UniProt] B3KW70 [RefSeq] NM_001297711 NP_001284640 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-003 [Transcript ID] ENST00000396549 [bp] 1195 [Protein] 163aa [Translation ID] ENSP00000379798 [CCDS] CCDS73437 [UniProt] Q13361 [RefSeq] NM_001297709 NP_001284638 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-010 [Transcript ID] ENST00000543369 [bp] 972 [Protein] 151aa [Translation ID] ENSP00000441492 [CCDS] CCDS76522 [UniProt] F5GYX4 [RefSeq] NM_001297710 NP_001284639 [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-007 [Transcript ID] ENST00000535336 [bp] 566 [Protein] 109aa [Translation ID] ENSP00000438525 [CCDS] CCDS76524 [UniProt] F5H413 [RefSeq] NM_001297712 NP_001284641 [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-201 [Transcript ID] ENST00000540087 [bp] 492 [Protein] 163aa [Translation ID] ENSP00000440496 [CCDS] CCDS73437 [UniProt] Q13361 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-015 [Transcript ID] ENST00000535411 [bp] 585 [Protein] 163aa [Translation ID] ENSP00000441185 [CCDS] - [UniProt] H0YG03 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-012 [Transcript ID] ENST00000544889 [bp] 582 [Protein] 91aa [Translation ID] ENSP00000445799 [CCDS] - [UniProt] F5H1C0 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-016 [Transcript ID] ENST00000543467 [bp] 388 [Protein] 79aa [Translation ID] ENSP00000444531 [CCDS] - [UniProt] H0YGS3 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Genes and/or transcript that contains an open reading frame (ORF).Protein coding | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-009 [Transcript ID] ENST00000544211 [bp] 840 [Protein] 128aa [Translation ID] ENSP00000443839 [CCDS] - [UniProt] F5H7Z2 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-008 [Transcript ID] ENST00000537009 [bp] 620 [Protein] 138aa [Translation ID] ENSP00000439289 [CCDS] - [UniProt] F5H2W4 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype] | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-006 [Transcript ID] ENST00000538107 [bp] 526 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-013 [Transcript ID] ENST00000538694 [bp] 470 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype] | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-005 [Transcript ID] ENST00000537128 [bp] 654 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
5dcc7cf2_t__MFAP5_005__ENST00000537128___Biotype | [Name] MFAP5-011 [Transcript ID] ENST00000534833 [bp] 510 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype] | Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron | [] | Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MFAP5-005 (ENST00000537128) | Biotype | http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000197614;r=12:8654264-8662888;t=ENST00000537128 | 28/1438042989301.17_20150728002309-00005-ip-10-236-191-2_420893393_0.json |
87edad69___PRKACA_005__ENST00000350356___Name | [Transcript ID] ENST00000308677 [bp] 2677 [Protein] 351aa [Translation ID] ENSP00000309591 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS12304 [UniProt] A0A024R7J0 P17612 [RefSeq] NM_002730 NP_002721 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Name] | PRKACA-001 | [
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] | Ensembl genome browser 81: Homo sapiens - Supporting evidence - Transcript: PRKACA-005 (ENST00000350356) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/SupportingEvidence?db=core;g=ENSG00000072062;r=19:14202509-14219202;t=ENST00000350356 | 28/1438042990112.92_20150728002310-00305-ip-10-236-191-2_418134022_0.json |
87edad69___PRKACA_005__ENST00000350356___Name | [Transcript ID] ENST00000589994 [bp] 1127 [Protein] 343aa [Translation ID] ENSP00000466651 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS12305 [UniProt] P17612 [RefSeq] NM_207518 NP_997401 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Name] | PRKACA-003 | [
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] | Ensembl genome browser 81: Homo sapiens - Supporting evidence - Transcript: PRKACA-005 (ENST00000350356) | Name | http://www.ensembl.org/Homo_sapiens/Transcript/SupportingEvidence?db=core;g=ENSG00000072062;r=19:14202509-14219202;t=ENST00000350356 | 28/1438042990112.92_20150728002310-00305-ip-10-236-191-2_418134022_0.json |
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