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0.439341
877564a8d3ba4818b2855455933ed884
(a) Coronal proton-density-weighted MRI depicting medial meniscal boundary in line with the tibial plateau and no signs of extrusion of the meniscal body (arrows). The root of the posterior horn of the medial meniscus appears thinned but without evidence of a definite tear. (b) Weight-bearing CT arthrography (WBCTa) demonstrates substantial extrusion of the medial meniscus beyond the tibial plateau (arrow). Weight-bearing imaging also reveals a complete tear of the root of the posterior tibial attachment of the medial meniscus with a wide gap (double headed arrow). WBCTa added clinical value by visualizing the cause of the patient’s persistent pain and informed the patient’s care plan.
PMC9806406
10.1177_1759720X221146621-fig4.jpg
0.465246
879b9f0388474dd0aeca7db43f8f409e
Decision tree in the overall population.
PMC9806428
10.1177_17588359221141760-fig1.jpg
0.415016
0df7a09a2a5549fab0065221bd70479c
Tornado diagram summarizing changes in the ICER of genomic stratification (ODX) versus clinical stratification strategies for overall population.ICER, incremental cost-effectiveness ratio; ODX, Oncotype DX
PMC9806428
10.1177_17588359221141760-fig2.jpg
0.399847
bc842eb6fd74403abce1bba539ee632e
ICER scatterplot per CT spared in the overall population.ICER, incremental cost-effectiveness ratio; CT, chemotherapy.
PMC9806428
10.1177_17588359221141760-fig3.jpg
0.541687
7ab69a2722cf4f4091502567881a9f22
Cost-effectiveness acceptability curve in the overall population.
PMC9806428
10.1177_17588359221141760-fig4.jpg
0.446466
14ae17aa0e724c9aa6903de43f5f257a
Decision tree in high clinical risk population.
PMC9806428
10.1177_17588359221141760-fig5.jpg
0.428305
1da91f255cf94c2fbc65fc1e98ef4a57
Tornado diagram summarizing changes in the ICER of genomic stratification (ODX) versus clinical stratification strategies for high clinical risk population.ICER, incremental cost-effectiveness ratio; ODX, Oncotype DX.
PMC9806428
10.1177_17588359221141760-fig6.jpg
0.516196
4b15087dfb124fed95958ad7c376271a
ICER scatterplot per CT spared in the high clinical risk population.ICER, incremental cost-effectiveness ratio; CT, chemotherapy.
PMC9806428
10.1177_17588359221141760-fig7.jpg
0.481161
947cb8e6767a4be29d61c1a5a4cb19a0
Study design
PMC9806812
13223_2022_753_Fig1_HTML.jpg
0.505685
44b23db5262f484b82d779af12b4b1aa
Plasma levels of IL-4 (A) and IFN-γ (B) in probiotic and placebo groups before and after intervention in patients with asthma. Bars represent the mean ± SEM. *: p<0.05
PMC9806812
13223_2022_753_Fig2_HTML.jpg
0.495057
4cba1fb179bb47289566d08646f591f0
The gene expression of miRNA-16 (A), miRNA-21 (B), miRNA-126 (C), miRNA-133b (D), miRNA-146a (E) and miRNA-155 (F) in the probiotic and placebo groups before and after intervention in patients with asthma. Bars represent the mean ± SEM. *: p<0.05
PMC9806812
13223_2022_753_Fig3_HTML.jpg
0.401624
dcb718cfda334851b1a06c3f134425c4
The correlation between miR-16 and FEV/FVC (A); miR-133 and miR-21 (B); and miR-126 and miR-155 (C) in patients with asthma. Data was analyzed by Spearman's rank correlation test. Scatter plot curve showed a negative correlation between miR-16 and FEV/FVC ratio (r=−0.38, p=0.02). A significant positive correlation between miR-133 and miR-21; and between miR-126 and miR-155 was shown in the plasma of patients with asthma (r=0.50, p=0.002) and (r=0.62, p=0.01), respectively
PMC9806812
13223_2022_753_Fig4_HTML.jpg
0.414078
9d5521a0999143e1b70850d1561f4397
An oral examination shows a soft-tissue mass of the right maxilla. The central part of the mass is depressed and demonstrates inflammation with necrosis. Stitches are seen in the incisional biopsy sites.
PMC9807789
isd-52-415-g001.jpg
0.408717
a151d7184a6b47e8a3b63196e2e05c58
Panoramic radiography reveals an aggressive soft tissue mass shadow with severe bone resorption involving the entire right maxilla. Dispersed bone particles are observed in the mass.
PMC9807789
isd-52-415-g002.jpg
0.43339
c15233a532de4c9dbc2798dffda73dcb
Contrast-enhanced axial (A and B) and coronal computed tomographic images (C and D) show a heterogeneous mass occupying the right maxilla. A and C. Enhancement is observed in the central inflamed area and the periphery of the mass (black solid arrows). B and D. Residual bone remnants are observed along the border (black hollow arrows).
PMC9807789
isd-52-415-g003.jpg
0.435196
f12d9ba946934897b1ebcb4c4f252390
A. Gross surgical specimen shows a smooth mass surface, except for the central inflamed area. B. The sectioned specimen shows a yellowish-white homogeneous cut surface (black solid arrow).
PMC9807789
isd-52-415-g004.jpg
0.371336
1c07ae220fb34598a06ea629235a65a9
A histopathological examination reveals strands of odontogenic epithelium (black solid arrows) in the fibro-collagenous matrix and myxoid connective tissue stroma (A. B. Hematoxylin and eosin stain, ×40 magnification).
PMC9807789
isd-52-415-g005.jpg
0.449261
71bec4af9110413380ac0be092ae6d35
Panoramic radiograph (A) and coronal and axial cone-beam computed tomographic images (B and C, respectively) taken 3 years after surgery show a postoperative defect, but no abnormal findings suggestive of recurrence.
PMC9807789
isd-52-415-g006.jpg
0.425354
a6cbe19c4bf4473cadd03bcfd38871a8
Optic disc pit on OCT at initial visit. OCT scan of the optic nerve head of the left eye before surgery shows an optic disc pit with associated serous retinal detachment.
PMC9808207
cop-2022-0013-0003-527050_f1.jpg
0.419788
d0d5a62371524845a08b6969c003cee1
Retinal reattachment and resolution of macular edema on OCT 18 months after surgery. OCT showed retinal reattachment and restored foveal contour.
PMC9808207
cop-2022-0013-0003-527050_f2.jpg
0.473848
103c575192de43b295551e0c855d55b5
Nerve optic disc on OCT 18 months after surgery showed the absence of retinal detachment. Eighteen months after surgery, OCT revealed the tamponated optic nerve disc.
PMC9808207
cop-2022-0013-0003-527050_f3.jpg
0.47694
abfaf2264e094bfca4eb69a49bc4f945
Principle of data collection and HFDI identification in the study. Data are collected through the ‘Kenko’ application completion by patients. Patients could have filled the first version of the app or the second version that included auto-completion and with or without the supervision of a health care professional. The risk of CYP-mediated drug interaction is automatically assessed according to previous published work.13 CYP, cytochrome P-450; HFDI, herbs and food-drug interaction; HFDS, herb, food and dietary supplements. aHDFS: regular intakes of herb, CYP-interacting food or dietary supplements. bHFDI: herb or food–drug interaction; evaluation based on Gougis et al.13cAccording to literature review.
PMC9808458
gr1.jpg
0.37732
2b10a6a0e55247b69c4095cfad7493fe
Treemap plot of the 148 HFDSs reported among the 95 patients of the study. Green tea and licorice could have been used as a phytotherapy (intake of herb/root extract) or as food (infusion or roots) through the specific food questionnaire. Phytotherapies are represented in green, food in olive green and dietary supplements in blue. HFDS, herbs, food and dietary supplements.
PMC9808458
gr2.jpg
0.449446
05416d1224de4c7685d08c50e21fffa6
Flowchart of systematic search.
PMC9809339
jcav14p0174g001.jpg
0.428299
137e9b7ff6434f1ea8dae3a1bf4b15a1
Forest plots of sensitivity for CEM (A) and breast MRI (B) with pooled values, and the I2 values.
PMC9809339
jcav14p0174g002.jpg
0.451348
5f6a23a2b92140b8b43a46b1abb26892
Forest plots of specificity for CEM (A) and breast MRI (B) with pooled values, and the I2 values.
PMC9809339
jcav14p0174g003.jpg
0.425301
e0098025845247c0b69f55454c63b69d
Forest plots of diagnostic odds ratio (DOR) for CEM (A) and breast MRI (B) with pooled values, and I2 values.
PMC9809339
jcav14p0174g004.jpg
0.452272
ef7a42b1a0ae4d54b260faae99eba153
Hierarchical sROC curves of CEM (black line) and breast MRI (black dotted line). The summary points of pooled sensitivity with pooled specificity for CEM and breast MRI are shown with the black circle and black triangle, respectively.
PMC9809339
jcav14p0174g005.jpg
0.496492
14d5c1cf326d4149bc662f8cca60ab23
IDEN algorithm and gene pair-based drug repurposing.(A) Flowchart of the DCA method. (B) Flowchart of the DEA method. (C) Comparison of three IDENs. (D) Gene pair-based drug repurposing.
PMC9810203
pcbi.1010744.g001.jpg
0.394335
e07d3cc02be44ccea0a73e7581136a22
Overview of MMI-, HMI- and MHCI-related gene pairs and genes.(A-B) Number of gene pairs and genes identified by the IDEN framework. (C-D) Number of gene pairs and genes identified by the DCA method. (E-F) Number of gene pairs and genes identified by the DEA method. (G-I) Comparison of gene pairs identified by the DCA and DEA methods. (J-L) Comparison of genes identified by the DCA and DEA methods.
PMC9810203
pcbi.1010744.g002.jpg
0.404873
3d9b28b91d984593a39d1d7c7bd0b38d
Advantage and confidence of IDEN framework.(A) Expression change of identified genes. (B) Expression change of genes identified by the DCA and DEA methods. (C) Enrichment of genes identified by the DCA and DEA methods in the important gene sets. F, B and V denote human targets for fungi, bacteria and viruses, respectively, and E, H and I denote essential genes, housekeeping genes and inflammatory genes, respectively. (D) Enrichment of the subclasses of IDEN-G in the important gene sets. (E) Clustering analysis of disease and healthy samples. The rows denote disease-related genes (red: up-regulated and blue: down-regulated) and the columns denote samples. *** P<0.001, ** 0.001≤ P<0.01 and * 0.01≤ P<0.05.
PMC9810203
pcbi.1010744.g003.jpg
0.492878
2927ba97397444a085d3a67901157f75
Evolutionary and expression features of disease-related genes.(A) dN/dS ratio. (B) Protein age. (C) Number of homologous genes. (D) Proportion of phosphorylated sites. (E) Proportion of ubiquitinated sites. (F) Proportion of acetylated sites. (G) Proportion of methylated sites. (H) Expression level of detected genes (GSE37250). (I) Expression level of detected genes (GSE39940). *** P<0.001, ** 0.001≤ P<0.01 and * 0.01≤ P<0.05.
PMC9810203
pcbi.1010744.g004.jpg
0.416901
0d24243ba86146058359a6b33b5bb7e4
Network topology features of disease-related genes.(A) Degree centrality. (B) Closeness centrality. (C) Betweenness centrality. (D) Shortest path length. (E) MIR measure. *** P<0.001, ** 0.001≤ P<0.01 and * 0.01≤ P<0.05.
PMC9810203
pcbi.1010744.g005.jpg
0.485307
a279722ef12e4ec6bfcd886350e0d027
Expression correlations of disease-related gene pairs.(A) Absolute PCC values of specific gene pairs. (B) Absolute PCC values of gene pairs shared by two statuses. (C) Absolute PCC values of common gene pairs. (D) Network of common gene pairs. If the absolute PCC values are consistently greater than (or less than) 0.5 in different groups, the expression correlation of a gene pair is considered to be approximately equal. *** P<0.001, ** 0.001≤ P<0.01 and * 0.01≤ P<0.05.
PMC9810203
pcbi.1010744.g006.jpg
0.439271
ee7ea47d27df450091a49de7159ae58e
KEGG pathway analysis of disease-related genes.(A) MMI-G. (B) HMI-G. (C) MHCI-G. (D) Common-G.
PMC9810203
pcbi.1010744.g007.jpg
0.413634
845b467250ed475285e091a15a7c6025
Disease-related genes and gene pairs in NF-κB signaling pathway.(A) Disease-related genes. (B) Disease-related gene pairs.
PMC9810203
pcbi.1010744.g008.jpg
0.416141
3443c5a8d84240fe92b877ba805bb330
Analysis of hub genes in different subnetworks.(A) Hub genes in Common-P. (B) Hub genes in HMI-MMI-SP. (C) Hub genes in MMI-MHCI-SP. (D) Hub genes in HMI-MHCI-SP. (E) Hub genes in HMI-SP. (F) Hub genes in MMI-SP. (G) Hub genes in MHCI-SP. (H-J) Expression levels of hub genes in the disease and healthy states.
PMC9810203
pcbi.1010744.g009.jpg
0.455266
47b7a6b404c44606a2dfb9ca927d3a81
Comparison of our proximity measures and existing network-based drug repurposing methods.(A-C) Performance of different methods on known HIV drugs. (D-F) Performance of different methods on known TB drugs. Evaluation measures include the AUC for identifying known drugs, rankings of known drugs and other drugs, and numbers of known drugs appearing in the top K drugs. These algorithms include our gene pair-based distance measures (distance1, distance2 and distance3), disease gene-based distance measures (Guney’s distance and Zhou’s distance), graph kernel methods (commute time, diffusion, p-step, regularized Laplacian, inverse cosine and avgRank), and diffusion state distance methods (DSD).
PMC9810203
pcbi.1010744.g010.jpg
0.405649
2ed09160d3a84f38b22df55e8a62212b
Drug-target-PPI associations for MMI.(A) Relationship between anti-MMI drug candidates and MMI-associated PPIs. Top 10 PPIs with the highest number of shortest links to drug targets are shown (one PPI may correspond to multiple targets). (B) Closest PPIs regulated by azithromycin. (C) Closest PPIs regulated by ciprofloxacin, moxifloxacin, ofloxacin and sparfloxacin. (D) Closest PPIs regulated by imatinib. (E) Closest PPIs regulated by trimethoprim.
PMC9810203
pcbi.1010744.g011.jpg
0.404452
a4bbcf5307da49c4961351ea719c7902
Frequency distribution of life satisfaction for the sample. Life satisfaction is measured on a 5-point scale, ranging from 1 (very unsatisfied) to 5 (very unsatisfied). Data source: China Family Panel Studies 2010, 2012, and 2014.
PMC9811203
fpsyg-13-1024875-g001.jpg
0.474505
7214cdc52596423dabfdf33c7739bff3
The region of common support between treated and untreated groups.
PMC9811203
fpsyg-13-1024875-g002.jpg
0.396908
d7bc02407ebb486088dd83101cfb0225
Objective response stratified by PNI value. (A) Pre-PNI and (B) post-PNI. CR, complete response; PD, progressive disease; PNI, prognostic nutritional index; PR, partial response; SD, stable disease.
PMC9811626
ol-25-02-13635-g00.jpg
0.406802
b04f338f7f3442d9ae725ac46beb0915
Kaplan-Meier curves for (A) overall survival and (B) progression-free survival from the initiation of pembrolizumab treatment for all patients.
PMC9811626
ol-25-02-13635-g01.jpg
0.515791
be19e85f55074663ae4831d9bd2c0c31
Kaplan-Meier curves for (A) overall survival and (B) progression-free survival stratified by pretreatment PNI values. The cutoff value of PNI was 36. PNI, prognostic nutritional index.
PMC9811626
ol-25-02-13635-g02.jpg
0.498197
7852119d304f479d8f18bfd5a1a4b2fd
Kaplan-Meier curves for (A) overall survival and (B) progression-free survival stratified by posttreatment PNI values within 2 months after the induction of pembrolizumab therapy. The cutoff value of PNI was 40. PNI, prognostic nutritional index.
PMC9811626
ol-25-02-13635-g03.jpg
0.40421
cde9d0abb5b24d9888fd0f88e55e0433
Historical context of this study.Major socio-political events and the corresponding timeframes of burials in the analyzed cemeteries.
PMC9812304
pone.0279546.g001.jpg
0.432424
4f55d620e4db499187b80cbc1e9103a6
Location of the studied rural and urban cemeteries.Squares indicate urban contexts, while triangles represent rural areas. The demographic analysis for each site is reported in the pie charts, which show a high variability in the percentage of non-adult individuals in each context [54, 57, 59, 60]; (Malve, original data). ♂ = adult males; ♀ = adult females; non-adults = individuals under 17 years of age; Unknown = adult individuals for whom sex estimation was not possible.
PMC9812304
pone.0279546.g002.jpg
0.49907
3de6926f7105445190ae6da1c6c18aec
Carbon and nitrogen stable isotope values of the samples colored by the cemeteries used in this study.The urban and rural distributions are separated in the boxplots. The values of local fauna are added as references (Aguraiuja-Lätti, original data; Malve, original data). The ellipses are drawn with 95% confidence intervals, and the outliers related to the urban and rural samples were determined using the IQR criterion.
PMC9812304
pone.0279546.g003.jpg
0.479973
e8739205036040d29884ce3bc7610b8a
Carbon and nitrogen stable isotope values of the samples colored corresponding to the cemeteries used in this study, plotted with the urban and rural mean adult values (including both males and females).(A) Scatter plot of the fetuses, perinates I, perinates II, and neonates. (B) Scatter plot of the infants and older children. The ID codes of the outliers and individuals with anomalous values discussed in the text are included.
PMC9812304
pone.0279546.g004.jpg
0.442538
c9aefc0ef6744533a36a90427cc5ac9d
Boxplot of the δ15N values of rural and urban children.The blue color indicates urban individuals, while the pink color indicates rural individuals. The non-adult values were plotted against the mean δ15N values of the urban and rural female individuals at the age of 20–35 and 35–50 years, indicated in the graph with the blue and pink dotted and dashed lines. The children in the 1–7 and 7–15 categories were further divided into smaller 2-years groups to provide higher resolution to the data. Statistical outliers have been determined for each age group according to the IQR criterion.
PMC9812304
pone.0279546.g005.jpg
0.427375
7a0cca0f3f5b4a0c96370b3b3ea56612
Sagittal proton density MRI images of the left TMJ. a Closed mouth position showing the posterior band of the disc is anterior to the 12:30 position in relation to the superior aspect of the condyle indicating anterior disc displacement. b Open mouth position showing the disc returning to the normal position suggesting ADDWR
PMC9813084
11282_2022_617_Fig1_HTML.jpg
0.459377
2b376fdb6cf34211a86df001102b099c
Standardized orientation of CBCT MPR views
PMC9813084
11282_2022_617_Fig2_HTML.jpg
0.469848
19854fee2fc64ff3b17a09e7c68a9f11
Condyle shapes, a Convex, b Round, c Flattened, d Angled
PMC9813084
11282_2022_617_Fig3_HTML.jpg
0.472447
770926aa8cf7455fad240755612114fe
CBCT corrected sagittal view of the condyle showing measurement of the anterior (3.02 mm) and posterior joint space (1.27 mm) to determine the condyle position
PMC9813084
11282_2022_617_Fig4_HTML.jpg
0.508123
a2d5002ca7654e1bbbd2d9d6a6f7674c
Corrected coronal view showing the mediolateral condyle width along the axial plane passing through the condyle and the condyle height along the sagittal plane as the perpendicular distance from the top of the condyle till the axial plane
PMC9813084
11282_2022_617_Fig5_HTML.jpg
0.472206
60eddb5838ea4701bd7e1cf8f47f80ba
Corrected sagittal view showing the anteroposterior condyle dimension
PMC9813084
11282_2022_617_Fig6_HTML.jpg
0.381044
d2b58557b5d04924b82d10b9b9f64b14
Flow diagram for microplastic extraction from salt samples
PMC9813175
11356_2022_22101_Fig1_HTML.jpg
0.442195
f6bf6aa230dd4480a1a31c1e2663b861
Microscopic and fluorescence images of isolated microplastics. a Clear fragment from Himalayan pink salt (salt G). b Fluorescence image of MPs in salt G. c Clear fragment from sea salt (salt C). d Fluorescent image of MPs in salt C. e Microscopic image of yellow fibre from black salt (salt B). f Fluorescent image of MPs in salt B. All the images were captured at 40 × magnification
PMC9813175
11356_2022_22101_Fig2_HTML.jpg
0.411206
b541195bea4649b5b2d42ef3f987cd99
Colour profile of MP a fragments and b fibres observed from salt samples (in 180 g of salt sample)
PMC9813175
11356_2022_22101_Fig3_HTML.jpg
0.371227
61594e6ee61141a982a01cd41e5bf4d1
Comparison of fragments and fibres in different commercial salt samples (in 180 g of salt sample). Adjusted p value: ****p < 0.0001, **p = 0.0078. Fibre number in salt A was statistically significant to fibre number in salts C, D, E, and F (p < 0.0001). Fibres in salt G were statistically significant with fibres in salts C, D, E, and F (p < 0.0001). Similarly, fibre number in salt B was statistically significant with fibres in salts C, D, E, and F (p < 0.0001). Finally, fibres in salt A were statistically significant with fibre number in salt B (p = 0.0078)
PMC9813175
11356_2022_22101_Fig4_HTML.jpg
0.409363
44d72bc615e54cf98c1e6357bd8bf115
SEM images of isolated particles from salt samples. a, c, d Fibres and b fragments. e–h depict the surface adhered particles on a–d. D is the width of fibres (i.e. distance between P1 to P2) 
PMC9813175
11356_2022_22101_Fig5_HTML.jpg
0.385992
e2c0416c6a6e4206b42d8f9d4d1ea0c6
a Polymer chemistry of isolated microplastics from commercial salts. b Proportion of identified polymer types
PMC9813175
11356_2022_22101_Fig6_HTML.jpg
0.397773
12ebfb45211c4e8c8ea4bc2319b81259
ATR-FTIR spectral data of the microplastics found in the salt samples
PMC9813175
11356_2022_22101_Fig7_HTML.jpg
0.480363
5c57266fa17143e2837a2b47be4cad78
Activated BCR signaling or its oncogenic mimics activate SRC family kinases such as LYN, resulting in phosphorylation of CD19-Y482/513 and IFITM3-Y20. Phosphorylated tyrosine residues on CD19, which provide docking sites for the SH2 domains of the PI3K regulatory subunit p85, facilitates localization and activation of PI3K to the lipid raft on plasma membrane. Transiently synthesized PIP3 by the PI3K catalytic subunit p110 stably accumulated by IFITM3 at the BCR signalosome. IFITM3, therefore, stabilizes the BCR signalosome, supports PIP3-mediated recruitment of downstream effector molecules such as BTK and ATK, enhances BCR signaling or BCR-mimicking oncogenic signaling. The effect of the amphipathic helix of IFITM3-mediated cholesterol accumulation at lipid raft on BCR signaling has not yet been investigated.
PMC9813432
bmb-55-12-602-f1.jpg
0.432156
647cdb1a5c0d44f2a2f8a51c8b99ee83
Lytic activity of Abp95 phage on A. baumannnii sensitive strain AB2013-95. (A) Abp95 plaques formed in a double-layer agar plate after infection of the AB2013-95 host; (B) Graphic of measured OD600 values of AB2013-95 bacterial culture during the time with (+) or without (−) Abp95; (C)–(E) Abp95 cause lysis in a bacterial culture after incubation. (Phage was added to the left tube and equal PBS was added to the right tube, (D): 4 h after adding phage, (E): 6 h after adding phage).
PMC9813454
41598_2022_26696_Fig1_HTML.jpg
0.458159
786faab857d947609f080c0826517c93
One-Step growth curve (A), thermal stability of Abp95 (B) and Phage Abp95 adsorption onto AB2013-95 (C).
PMC9813454
41598_2022_26696_Fig2_HTML.jpg
0.474959
408ca63733774d7d86e513a3a41e6cbb
Electron microscopy of Abp95. (A) The morphology of Abp95 under TEM magnified by 0.5 million times (A) and 1 million times (B).
PMC9813454
41598_2022_26696_Fig3_HTML.jpg
0.445054
d3c12508a185426d86423a58db710ef5
Major phage proteins and restriction endonuclease mapping of Abp95. (A) lane 1, SDS-PAGE of purified phage particles; lane 2, protein molecular weight marker. (B) Lane 1, DNA molecular weight markers Lambda DNA digested with HindIII; lane 2 and 3, Abp95 genomic DNA digested by XhoI and NheI, respectively; lane 4, Abp95 nondigested DNA. (the gel is cropped).
PMC9813454
41598_2022_26696_Fig4_HTML.jpg
0.387079
c6ee94bb5d8f4ea98651491f9b71c03e
Characterization of 58 sensitive A. baumannii strains. (A) Sources of the 58 strains. wd (wound surface), sp (sputa), ca (catheter), bl (bloodstream), ps (purulent secretion) and ti (tissue); (B) STs identified among 58 strains.
PMC9813454
41598_2022_26696_Fig5_HTML.jpg
0.453114
d8899e1b568f4186ac89d419fd4f1088
Wound size in infected mice treated with Abp95. Wound sizes were measured 1, 3, and 7 days after infection and are shown as mean ± standard deviation. There was no statistical difference between the control group and the phage treatment group.
PMC9813454
41598_2022_26696_Fig6_HTML.jpg
0.423792
090b4271566347e8847d61b99fd517d4
Flowchart of the results of the literature search.
PMC9813495
fmed-09-960960-g001.jpg
0.399916
1cb9510e195b4bf895875ee7c8b4a5d2
The number of studies on EAAM in a given year reported in absolute terms. Studies exploring a mixed intervention of massages and other application types were counted as massage studies.
PMC9813495
fmed-09-960960-g002.jpg
0.441447
2e6a0e6aaf21425eb097dbff62bd9a77
Studies on EAAM per level of evidence category reported in absolute terms.
PMC9813495
fmed-09-960960-g003.jpg
0.457967
1bf2f3955efc4ac3b9ec4bcb9387594b
N‑heterocyclic carbene complexes serve as molecular gyroscopes.Binuclear Cu(I) and Au(I) complexes of 1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene ligands bridged by deuterated pyrazine provide a scaffold for 2-fold rotational motion in luminescent amphidynamic crystals. Adapted with permission from J. Am. Chem. Soc. 139, 18115– 18121. Copyright (2021) American Chemical Society.
PMC9814036
42004_2021_458_Fig1_HTML.jpg
0.466023
bf6017f6e5d64a0cbdb8004c478cc423
Identification of SfMCT inhibitors.A Screening for L-lactate transport inhibitors using a transport inhibition assay (final inhibitor concentrations are indicated). Full names and molecular structures of the used compounds are given in Supplementary Fig. 1. For compounds highlighted by a star, Ki values were determined. Residual uptake in the presence of competitor is normalized with respect to control samples without competitor (control). B–J Ki determination of selected inhibitors with displayed structures. The determined Ki values and the 95% confidence intervals are indicated in the corresponding panels. Data are represented as mean ± SEM from three to five independent experiments, each in triplicate. If not visible, error bars are smaller than symbols. Individual data points are shown as open circles.
PMC9814091
42004_2021_564_Fig1_HTML.jpg
0.417208
88a4bed259f94073b3ae6650b15103c0
SfMCT ligand binding site.A Overall structure of SfMCT in the outward-open conformation viewed in the plane of the membrane with indicated binding site residues (cyan) and surface representation. B–F Binding mechanism of 1OHN2C, N2C, 3PP, 2M3PP, and TSA to SfMCT. Corresponding omit maps are shown in Supplementary Fig. 4. Residues within a distance of 4 Å from the bound compounds are displayed as ball-and-stick models and highlighted in cyan. Pink spheres indicate the centers of benzene rings of aromatic residues and inhibitors, which are involved in π–π stacking interactions. Water molecules are indicated by labeled red spheres. The role of the second water molecule (2) is shown in Supplementary Fig. 7. The different rotamer conformation of L28 in the case of TSA binding is indicated by a star in (F). Distances are given in Ångström (Å). G, H The orientation between the guanidinium plane of R280 and the carboxylate-groups of bound inhibitors can be quantified by measuring the angle ψ between the Nε–Cζ and Cx–Cy bonds as well as the angle θ between the guanidinium (cyan) and the carboxylate (gray) planes. The following angles were measured: 1OHN2C ψ = 15°, θ = 15°; N2C ψ = 16°, θ = 20°; 3PP ψ = 17°, θ = 31°; 2M3PP ψ = 11°, θ = 18°; TSA ψ = 69°, θ = 16°. PDB IDs of displayed structures are 6ZGR (1OHN2C), 6ZGS (3PP), 6ZGT (N2C), 6ZGU (2M3PP) and 6G9X (TSA).
PMC9814091
42004_2021_564_Fig2_HTML.jpg
0.436092
0817fafec26344968968830b374a8340
Hydrophobic interactions involved in ligand binding.Ligands A 1OHN2C, B N2C, C 3PP, and D 2M3PP as determined by structural analysis21. Hydrophobic residues within a distance of 4 Å from the bound compounds are displayed as ball-and-stick models and highlighted in cyan. The centers of benzene rings of aromatic residues and inhibitors, which are involved in π–π stacking interactions, are indicated by pink spheres. Distances are given in Ångström (Å). E–H Surface representations of the inhibitor binding site region. Bound compounds are displayed as ball-and-stick models. A cavity between TMs 7 and 10 is indicated by a black curved line and a star. PDB IDs of displayed structures are 6ZGR (1OHN2C), 6ZGS (3PP), 6ZGT (N2C), and 6ZGU (2M3PP).
PMC9814091
42004_2021_564_Fig3_HTML.jpg
0.454031
ea374d44d6b64b949605b1a74ebba383
Flowchart corresponding to the identification, screening, eligibility, and included criteria of this study.
PMC9814600
41598_2022_26583_Fig1_HTML.jpg
0.532145
95629549b5b144b286a146898f2853db
(A) Effects of strength training on systolic blood pressure in overall hypertensive individuals. (B) Effects of strength training on diastolic blood pressure in general hypertensive individuals.
PMC9814600
41598_2022_26583_Fig2_HTML.jpg
0.459196
a081626d6d754467bbf86dd1daa4d741
(A) Effects of strength training on systolic blood pressure in hypertensive individuals aged 18–50 and 51–70 years old. (B) Effects of strength training on diastolic blood pressure in hypertensive individuals with 18–50 and 51–70 years.
PMC9814600
41598_2022_26583_Fig3_HTML.jpg
0.460692
8f4aa7ece16143d0b474a6770d46f842
(A) Effects of strength training on systolic blood pressure in hypertensive individuals with less than 60% load intensity, 60% moderate Borg scale, and more than 60% of load intensity. (B) Effects of strength training on diastolic blood pressure in hypertensive individuals with less than 60% of load intensity, 60% moderate Borg scale, and more than 60% of load intensity.
PMC9814600
41598_2022_26583_Fig4_HTML.jpg
0.411723
6506fbe0fed7493caec3a8af1d6fba5c
(A) Effects of strength training on systolic blood pressure in hypertensive individuals with 2 and 3 days a week of training frequency. (B) Effects of strength training on diastolic blood pressure in hypertensive individuals with 2 and 3 days a week of training frequency.
PMC9814600
41598_2022_26583_Fig5_HTML.jpg
0.445688
0d01eface9004d16bb664104d0f90bbf
(A) Effects of strength training on systolic blood pressure in hypertensive individuals with 8 to 10, 12, and 14 to 48 weeks of training duration. (B) Effects of strength training on diastolic blood pressure in hypertensive individuals with 8 to 10, 12, and 14 to 48 weeks of training duration.
PMC9814600
41598_2022_26583_Fig6_HTML.jpg
0.432906
fbc336699f8b4956951f869cfe836897
(A) Funnel plot for the meta-analysis of strength training such as treatment of hypertension. Egger’s test (P = 0.01729) shows a significant publication bias. Beck et al.26 and Moraes et al.33 are the biggest outliers. (B) Risk of bias graph.
PMC9814600
41598_2022_26583_Fig7_HTML.jpg
0.475673
a0e0829f445648f6b8fe5bd194faaddc
Role of finger millet bio-active molecule induced gut microbes in alleviation of diabetes; butyrate producers Faecalibacterium, Roseburia, and Eubacterium play a crucial role in reducing systemic inflammation by maintaining the gut barrier function to avoid the gut invasion by pathogenic microbes and toxins. Mucus degrading Akkermansia, participates in glucose-homeostasis by means of Amuc_1100 protein and regulates the blood glucose and lowers the gut inflammatory load by releasing propionate. Probiotics (Bifidobacterium and Lactobacillus) also improves the toxin level by modulating the gut community, i.e., by lowering the various possible opportunistic pathogen, and simultaneously enhancing the beneficial microbes.
PMC9815516
fnut-09-1056445-g001.jpg
0.442949
9d81fbed6b214026bace975e8bb3bb19
Study Flow Diagram. Consort Diagram showing that 41 potential participants were screened and 30 were enrolled, out of which 15 per group (COC or Depo).
PMC9816169
41598_2022_24215_Fig1_HTML.jpg
0.438085
6b1f5f6bc48a4ee7ab4b739b93037fce
(A) Levonorgestrel (LNG) concentrations measured by LCMS/MS method in serum and urine samples were collected on days-1 and 3 of the COC treatment. No individuals showed detectable LNG in serum or urine at baseline (Pre) but all showed an increase at 6 h post ingestion on both days (day-1 and 3). Only eight of 15 participants had detectable levels at all three time points post baseline. Six participants had LNG levels below the level of quantification at the trough timepoint (24 h post dose 2), three of whom also had undetectable levels 6 h after their first dose. (B) Levonorgestrel (LNG) concentrations measured by Enzyme Immuno assay (EIA) method in urine samples collected on day-1 and 3 of the COC treatment. No individuals showed detectable LNG in serum or urine at baseline (Pre) and showed detectable levels at all time points post ingestion on both days (day-1 and 3). (C) Medroxyprogesterone (MPA) concentrations measured by LC–MS/MS method in serum and urine samples collected on day 0 (Baseline) and 21 and 60 days after depo injection. Four individuals had detectable MPA in serum prior to receiving their injection, two of whom also had detectable MPA in urine. The two women with undetectable urine MPA but detectable serum MPA had levels below that required for contraceptive efficacy (< 0.2 ng/mL). One individual with undetectable serum MPA, had detectable urine MPA, with the level in the urine slightly above the serum threshold level (< 0.2 ng/mL). We detected MPA in serum and urine of all participants at 21- and 60-days post injection.
PMC9816169
41598_2022_24215_Fig2_HTML.jpg
0.41329
9947e1e638a54690a0f685e75f596d12
(A–C) A bi-clustering heatmap showing the visual expression profile of the top differentially expressed genes sorted by their adjusted p-value by plotting their log2 transformed expression values in samples (generated by using the Wald test). (A) shows the pre- versus D21 comparison where we observed 10 differentially expressed genes, out of which nine were upregulated and one was downregulated. (B) shows pre-versus D60 comparison, we saw five differentially expressed genes; one was downregulated and four were upregulated. (C) shows the last comparison between D21 versus D60, there were a total of 50 differentially expressed genes out of which 32 were downregulated and 18 were upregulated.
PMC9816169
41598_2022_24215_Fig3_HTML.jpg
0.45959
a31219edfe7b43449cb4bcb6ff21acab
(A–C) Volcano plots to visualize the expression profile of the top differentially expressed genes sorted by their adjusted p-value by plotting their log2 transformed expression values. Downregulated DEGs are noted in red and upregulated DEGs are noted in blue.
PMC9816169
41598_2022_24215_Fig4_HTML.jpg
0.409565
d5224e5b763642658963d4c0ac1ff4aa
Competitive Ki screening. (A) CETSA EC50 analysis of AR in intact CWR22Pc-R1-AD1 cells treated with DHT, DHT and darolutamide, or DMSO control. Normalized AlphaLISA signals from intact cell samples heated to 46 °C after incubation with a 7-step dilution series of darolutamide (N = 4; n = 8) in the presence of serially diluted DHT. (B) Schild plot showing the fold change in agonist CETSA EC50 at the indicated darolutamide concentration, where A´ is the darolutamide concentration normalized to the corresponding EC50 value in the absence of darolutamide (A).
PMC9817687
cancers-15-00002-g001.jpg
0.419572
c47a4de21cfb4ababbfe778c58170a3f
Comparison of expressed protein-coding genes and proteins detected in VCaP cells across all treatment conditions. For proteomic data analysis, proteins with signals in three replicates of at least one condition (N = 7427) were selected. (A) Euler diagram showing the overlap between the expressed protein-coding genes and corresponding proteins at both time points. (B) Histogram showing average expression (TPM) of genes detected only in RNA-seq (blue) or in both RNA-seq and proteomic data (green). (C) Scatter plot of average mRNA and protein expression. The top five most abundant genes and proteins are marked in blue and green, respectively. (D) Pie chart showing the functional classification of the most abundant genes (top 100 based on average expression across all treatment conditions). (E) Pie chart showing the functional classification of the most abundant proteins (top 100 based on average expression across all treatment conditions).
PMC9817687
cancers-15-00002-g002.jpg
0.452349
da61d6dff58b4f2483af052f10a63d66
(A) Principal component analysis of transcriptomic and proteomic data generated from VCaP cells treated with DMSO, R1881 or R1881 and darolutamide for the indicated time. The percent of explained variance is indicated on the axes. (B) Proportion of variance explained by the first ten principal components in proteomic and transcriptomic data. (C) Top hallmark gene sets enriched among mRNAs and proteins that are down- or up-regulated at least twofold upon darolutamide and R1881 treatment, compared to R1881 treatment only. Stars (*) indicate FDR < 0.25.
PMC9817687
cancers-15-00002-g003.jpg
0.431919
8ba215dee4b34ea894c035d996b7a4af
(A) Heatmap plots of mRNA (left side) and protein (right side) levels of AR activity signature genes following treatment of VCaP cells with DMSO, R1881, or R1881 and darolutamide for the indicated times. (B) Scatterplots of Log2 fold changes in mRNA and protein abundance upon R1881 and darolutamide treatment compared to R1881 treatment alone. Gene expression after 8 h and protein level after 14 h of treatment was determined as early time point (left side). Gene expression after 22 h and protein level after 28 h of treatment was determined as late time point (right side). Genes with differential magnitude of response on the mRNA and protein levels are indicated in black, a few selected androgen targets are highlighted.
PMC9817687
cancers-15-00002-g004.jpg
0.393015
2e5d097441cd47ee980145eb11dd5fa7
Gene and protein expression changes upon androgen, or androgen and darolutamide treatment, relative to the corresponding DMSO control which was set to 1 (grey horizontal dotted line). Blue bars indicate expression of genes measured by RNA-seq, green bars indicate levels of proteins measured by tandem mass spectrometry. (A) Examples of genes with discordant changes in mRNA and protein levels. (B) Examples of genes with similar responses at the mRNA and protein levels. Stars indicate the false discovery rate (FDR) for comparison of the indicated condition to the corresponding DMSO control: *** p < 0.0001, ** p < 0.001, * p < 0.01.
PMC9817687
cancers-15-00002-g005.jpg
0.452513
8070a3cb17ca43fbbcdb1e8069cdf061
Determination of AR peaks and AR-mediated loops around selected gene regions in VCaP cells treated with DMSO, androgen, or androgen and darolutamide. (A) AR HiChIP and ChIP-seq results for genes with divergent regulation of RNA and protein levels. (B) AR HiChIP and ChIP-seq results for genes with parallel regulation of RNA and protein levels. Loop intensities are reflected by the thickness of the lines.
PMC9817687
cancers-15-00002-g006a.jpg
0.504354
254506257418416c8286ae807edd7be7
Overview of the mechanisms involved in probiotics’ antigenotoxic activity.
PMC9818275
cancers-15-00190-g001.jpg
0.469003
078936b692e14ef78a0222448738fbc0
Expansion of NanoLC-EI-MS chromatogram of FFAs in Chia seed oil.
PMC9818636
foods-12-00023-g001.jpg
0.409309
37517b495ab14dd0a3b46bbb4d3ab6c4
Expansion of NARP-HPLC-APCI(+)-qMS chromatogram of TAGs in Chia seed oil.
PMC9818636
foods-12-00023-g002.jpg
0.416258
6b352b0da366483fbfbd98725cefaa87
RP-UHPLC-APCI(+)-qMS analysis of phospholipids in Chia seed oil.
PMC9818636
foods-12-00023-g003.jpg
0.412803
d9bba670d8e74460b583c83de7eeac02
Expansion of the RP-LC-ESI(−)-qMS chromatogram of polyphenols in Chia seed oil.
PMC9818636
foods-12-00023-g004.jpg