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10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-001 [Transcript ID] ENST00000569418 [bp] 3513 [Protein] 953aa [Translation ID] ENSP00000457576 [CCDS] CCDS42164 [UniProt] A0A024R6T1 Q9NQC7 [RefSeq] NM_001042355 NP_001035814 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-006 [Transcript ID] ENST00000564326 [bp] 3259 [Protein] 953aa [Translation ID] ENSP00000454515 [CCDS] CCDS42164 [UniProt] A0A024R6T1 Q9NQC7 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-009 [Transcript ID] ENST00000568704 [bp] 3292 [Protein] 771aa [Translation ID] ENSP00000456488 [CCDS] - [UniProt] H3BS09 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-002 [Transcript ID] ENST00000566206 [bp] 3104 [Protein] 910aa [Translation ID] ENSP00000462134 [CCDS] - [UniProt] J3KRR7 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-007 [Transcript ID] ENST00000566679 [bp] 1158 [Protein] 304aa [Translation ID] ENSP00000456912 [CCDS] - [UniProt] H3BSW9 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-011 [Transcript ID] ENST00000569681 [bp] 777 [Protein] 166aa [Translation ID] ENSP00000457108 [CCDS] - [UniProt] H3BTB8 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-015 [Transcript ID] ENST00000562884 [bp] 725 [Protein] 104aa [Translation ID] ENSP00000463197 [CCDS] - [UniProt] J3QKR2 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-012 [Transcript ID] ENST00000564634 [bp] 539 [Protein] 33aa [Translation ID] ENSP00000455535 [CCDS] - [UniProt] H3BPZ5 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-014 [Transcript ID] ENST00000566024 [bp] 409 [Protein] 66aa [Translation ID] ENSP00000458507 [CCDS] - [UniProt] I3L117 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-004 [Transcript ID] ENST00000569891 [bp] 4665 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-008 [Transcript ID] ENST00000563629 [bp] 2568 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-013 [Transcript ID] ENST00000563976 [bp] 547 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
10056853_pt__CYLD_006__ENST00000564326___Biotype
|
[Name] CYLD-016 [Transcript ID] ENST00000568744 [bp] 370 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-004 [Transcript ID] ENST00000366898 [bp] 4180 [Protein] 465aa [Translation ID] ENSP00000355865 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5281 [UniProt] O60260 X5DR79 [RefSeq] NM_004562 NP_004553 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-005 [Transcript ID] ENST00000366897 [bp] 2877 [Protein] 437aa [Translation ID] ENSP00000355863 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5282 [UniProt] O60260 [RefSeq] NM_013987 NP_054642 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-006 [Transcript ID] ENST00000366896 [bp] 2514 [Protein] 316aa [Translation ID] ENSP00000355862 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5283 [UniProt] O60260 [RefSeq] NM_013988 NP_054643 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-002 [Transcript ID] ENST00000366892 [bp] 1505 [Protein] 368aa [Translation ID] ENSP00000355858 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B1AKC3 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-003 [Transcript ID] ENST00000338468 [bp] 1276 [Protein] 274aa [Translation ID] ENSP00000343589 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O60260 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-001 [Transcript ID] ENST00000366894 [bp] 1157 [Protein] 274aa [Translation ID] ENSP00000355860 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O60260 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-203 [Transcript ID] ENST00000612540 [bp] 603 [Protein] 201aa [Translation ID] ENSP00000478353 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WU39 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-201 [Transcript ID] ENST00000610470 [bp] 531 [Protein] 176aa [Translation ID] ENSP00000483773 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X0Z9 [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-204 [Transcript ID] ENST00000615065 [bp] 261 [Protein] 87aa [Translation ID] ENSP00000484112 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X1E2 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-202 [Transcript ID] ENST00000612485 [bp] 225 [Protein] 74aa [Translation ID] ENSP00000480716 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WX46 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
3defb97f_t__PARK2_001__ENST00000366894___Flags
|
[Name] PARK2-007 [Transcript ID] ENST00000479615 [bp] 904 [Protein] 218aa [Translation ID] ENSP00000434414 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] O60260 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK2-001 (ENST00000366894)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185345;r=6:161350099-162727668;t=ENST00000366894
|
46/1438042988922.24_20150728002308-00134-ip-10-236-191-2_425431583_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-010 [Transcript ID] ENST00000427738 [bp] 8503 [Protein] 956aa [Translation ID] ENSP00000392025 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS45482 [UniProt] Q9NQC7 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-003 [Transcript ID] ENST00000311559 [bp] 5371 [Protein] 956aa [Translation ID] ENSP00000308928 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS45482 [UniProt] Q9NQC7 [RefSeq] NM_015247 NP_056062 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-005 [Transcript ID] ENST00000398568 [bp] 3536 [Protein] 953aa [Translation ID] ENSP00000381574 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS42164 [UniProt] A0A024R6T1 Q9NQC7 [RefSeq] NM_001042412 NP_001035877 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-001 [Transcript ID] ENST00000569418 [bp] 3513 [Protein] 953aa [Translation ID] ENSP00000457576 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS42164 [UniProt] A0A024R6T1 Q9NQC7 [RefSeq] NM_001042355 NP_001035814 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-006 [Transcript ID] ENST00000564326 [bp] 3259 [Protein] 953aa [Translation ID] ENSP00000454515 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS42164 [UniProt] A0A024R6T1 Q9NQC7 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-009 [Transcript ID] ENST00000568704 [bp] 3292 [Protein] 771aa [Translation ID] ENSP00000456488 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BS09 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-002 [Transcript ID] ENST00000566206 [bp] 3104 [Protein] 910aa [Translation ID] ENSP00000462134 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3KRR7 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-007 [Transcript ID] ENST00000566679 [bp] 1158 [Protein] 304aa [Translation ID] ENSP00000456912 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BSW9 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-011 [Transcript ID] ENST00000569681 [bp] 777 [Protein] 166aa [Translation ID] ENSP00000457108 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BTB8 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-015 [Transcript ID] ENST00000562884 [bp] 725 [Protein] 104aa [Translation ID] ENSP00000463197 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QKR2 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-012 [Transcript ID] ENST00000564634 [bp] 539 [Protein] 33aa [Translation ID] ENSP00000455535 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPZ5 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-014 [Transcript ID] ENST00000566024 [bp] 409 [Protein] 66aa [Translation ID] ENSP00000458507 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] I3L117 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-004 [Transcript ID] ENST00000569891 [bp] 4665 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-008 [Transcript ID] ENST00000563629 [bp] 2568 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-013 [Transcript ID] ENST00000563976 [bp] 547 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
1d8e0607_pt__CYLD_006__ENST00000564326___Flags
|
[Name] CYLD-016 [Transcript ID] ENST00000568744 [bp] 370 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CYLD-006 (ENST00000564326)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000083799;r=16:50742081-50796711;t=ENST00000564326
|
46/1438042986444.39_20150728002306-00152-ip-10-236-191-2_427154395_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-202 [Transcript ID] ENST00000539050 [bp] 2024 [Protein] 420aa [Translation ID] ENSP00000442343 [CCDS] CCDS73166 [UniProt] B7Z1F5 [RefSeq] NM_001198855 NP_001185784 [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-203 [Transcript ID] ENST00000623108 [bp] 1962 [Protein] 420aa [Translation ID] ENSP00000485110 [CCDS] CCDS73166 [UniProt] B7Z1F5 [RefSeq] NM_001198853 NP_001185782 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-001 [Transcript ID] ENST00000371270 [bp] 1923 [Protein] 490aa [Translation ID] ENSP00000360317 [CCDS] CCDS7438 [UniProt] P10632 [RefSeq] NM_000770 NP_000761 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-201 [Transcript ID] ENST00000535898 [bp] 1799 [Protein] 388aa [Translation ID] ENSP00000445062 [CCDS] CCDS55721 [UniProt] P10632 [RefSeq] NM_001198854 NP_001185783 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-204 [Transcript ID] ENST00000628935 [bp] 924 [Protein] 307aa [Translation ID] ENSP00000487145 [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-008 [Transcript ID] ENST00000490994 [bp] 1961 [Protein] 83aa [Translation ID] ENSP00000433314 [CCDS] - [UniProt] E9PLI9 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-003 [Transcript ID] ENST00000527420 [bp] 1868 [Protein] 393aa [Translation ID] ENSP00000433191 [CCDS] - [UniProt] G3V188 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-007 [Transcript ID] ENST00000525991 [bp] 1587 [Protein] 99aa [Translation ID] ENSP00000433842 [CCDS] - [UniProt] E9PIW6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-006 [Transcript ID] ENST00000527953 [bp] 2117 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-005 [Transcript ID] ENST00000526814 [bp] 2078 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-004 [Transcript ID] ENST00000533320 [bp] 2033 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-002 [Transcript ID] ENST00000479946 [bp] 1572 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
b05a6ace_Gene__CYP2C8__ENSG00000138115___Biotype
|
[Name] CYP2C8-011 [Transcript ID] ENST00000531714 [bp] 607 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: CYP2C8 (ENSG00000138115)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000138115;r=10:95036772-95069497
|
46/1438042988922.24_20150728002308-00053-ip-10-236-191-2_429583527_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-001 [Transcript ID] ENST00000463745 [bp] 4231 [Protein] 186aa [Translation ID] ENSP00000419619 [CCDS] CCDS2928 [UniProt] Q9H0F7 [RefSeq] NM_001278293 NP_001265222 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-201 [Transcript ID] ENST00000335979 [bp] 1630 [Protein] 186aa [Translation ID] ENSP00000337722 [CCDS] CCDS2928 [UniProt] Q9H0F7 [RefSeq] NM_032146 NP_115522 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-202 [Transcript ID] ENST00000394206 [bp] 1590 [Protein] 186aa [Translation ID] ENSP00000377756 [CCDS] CCDS2928 [UniProt] Q9H0F7 [RefSeq] NM_177976 NP_816931 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-004 [Transcript ID] ENST00000462412 [bp] 894 [Protein] 121aa [Translation ID] ENSP00000418740 [CCDS] - [UniProt] C9IZ13 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-006 [Transcript ID] ENST00000476753 [bp] 675 [Protein] 54aa [Translation ID] ENSP00000419934 [CCDS] - [UniProt] H7C5H6 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-007 [Transcript ID] ENST00000631834 [bp] 557 [Protein] 147aa [Translation ID] ENSP00000488530 [CCDS] - [UniProt] - [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-002 [Transcript ID] ENST00000493990 [bp] 1705 [Protein] 186aa [Translation ID] ENSP00000418057 [CCDS] CCDS2928 [UniProt] Q9H0F7 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-003 [Transcript ID] ENST00000496713 [bp] 851 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
3fe04679_pt__ARL6_201__ENST00000335979___Biotype
|
[Name] ARL6-005 [Transcript ID] ENST00000494363 [bp] 553 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ARL6-201 (ENST00000335979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000113966;r=3:97764521-97798535;t=ENST00000335979
|
46/1438042988922.24_20150728002308-00009-ip-10-236-191-2_424461385_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-001 [Transcript ID] ENST00000493678 [bp] 1088 [Protein] 189aa [Translation ID] ENSP00000418770 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS93 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [UniProt]
|
Q99497 V9HWC2
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-005 [Transcript ID] ENST00000377491 [bp] 977 [Protein] 189aa [Translation ID] ENSP00000366711 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS93 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [UniProt]
|
Q99497 V9HWC2
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-002 [Transcript ID] ENST00000338639 [bp] 949 [Protein] 189aa [Translation ID] ENSP00000340278 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS93 [RefSeq] NM_001123377 NM_007262 NP_001116849 NP_009193 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [UniProt]
|
Q99497 V9HWC2
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-006 [Transcript ID] ENST00000377488 [bp] 783 [Protein] 189aa [Translation ID] ENSP00000366708 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS93 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [UniProt]
|
Q99497 V9HWC2
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-003 [Transcript ID] ENST00000377493 [bp] 795 [Protein] 169aa [Translation ID] ENSP00000466242 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt]
|
K7ELW0
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-010 [Transcript ID] ENST00000469225 [bp] 711 [Protein] 160aa [Translation ID] ENSP00000466756 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt]
|
K7EN27
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-004 [Transcript ID] ENST00000493373 [bp] 624 [Protein] 189aa [Translation ID] ENSP00000465404 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [UniProt]
|
Q99497 V9HWC2
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-009 [Transcript ID] ENST00000497113 [bp] 670 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt]
|
-
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-008 [Transcript ID] ENST00000465354 [bp] 949 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt]
|
-
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
2d773c08_t__PARK7_002__ENST00000338639___UniProt
|
[Name] PARK7-007 [Transcript ID] ENST00000460192 [bp] 567 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt]
|
-
|
[
[
"Q",
"9",
"9",
"4",
"9",
"7",
" ",
"V",
"9",
"H",
"W",
"C",
"2"
],
[
"K",
"7",
"E",
"L",
"W",
"0"
],
[
"K",
"7",
"E",
"N",
"2",
"7"
],
[
"-"
]
] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PARK7-002 (ENST00000338639)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000116288;r=1:8021723-8045339;t=ENST00000338639
|
46/1438042988922.24_20150728002308-00094-ip-10-236-191-2_420616126_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-204 [Transcript ID] ENST00000624204 [bp] 3417 [Protein] 756aa [Translation ID] ENSP00000485312 [CCDS] CCDS74615 [UniProt] B7ZAA0 [RefSeq] NM_001289408 NP_001276337 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-202 [Transcript ID] ENST00000432292 [bp] 3234 [Protein] 756aa [Translation ID] ENSP00000398378 [CCDS] CCDS74615 [UniProt] B7ZAA0 [RefSeq] NM_001289409 NP_001276338 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-001 [Transcript ID] ENST00000441310 [bp] 3225 [Protein] 932aa [Translation ID] ENSP00000406490 [CCDS] CCDS2302 [UniProt] P54277 [RefSeq] NM_000534 NP_000525 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-003 [Transcript ID] ENST00000409823 [bp] 2795 [Protein] 893aa [Translation ID] ENSP00000387125 [CCDS] CCDS46474 [UniProt] P54277 [RefSeq] NM_001128143 NP_001121615 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-010 [Transcript ID] ENST00000447232 [bp] 2576 [Protein] 770aa [Translation ID] ENSP00000401064 [CCDS] CCDS46473 [UniProt] P54277 [RefSeq] NM_001128144 NP_001121616 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-201 [Transcript ID] ENST00000418224 [bp] 3018 [Protein] 667aa [Translation ID] ENSP00000404492 [CCDS] - [UniProt] Q5FBZ9 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-006 [Transcript ID] ENST00000424307 [bp] 2153 [Protein] 711aa [Translation ID] ENSP00000389938 [CCDS] - [UniProt] E9PC65 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-004 [Transcript ID] ENST00000409985 [bp] 1882 [Protein] 181aa [Translation ID] ENSP00000386623 [CCDS] - [UniProt] E9PC40 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-011 [Transcript ID] ENST00000409593 [bp] 1668 [Protein] 555aa [Translation ID] ENSP00000387169 [CCDS] - [UniProt] P54277 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-203 [Transcript ID] ENST00000618056 [bp] 1468 [Protein] 248aa [Translation ID] ENSP00000480632 [CCDS] - [UniProt] Q5FBZ4 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-007 [Transcript ID] ENST00000374826 [bp] 948 [Protein] 165aa [Translation ID] ENSP00000363959 [CCDS] - [UniProt] Q5XG96 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-016 [Transcript ID] ENST00000452382 [bp] 881 [Protein] 266aa [Translation ID] ENSP00000396232 [CCDS] - [UniProt] E9PH88 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-014 [Transcript ID] ENST00000424766 [bp] 831 [Protein] 194aa [Translation ID] ENSP00000410082 [CCDS] - [UniProt] C9JF76 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-013 [Transcript ID] ENST00000446877 [bp] 560 [Protein] 44aa [Translation ID] ENSP00000413837 [CCDS] - [UniProt] C9JKP0 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-015 [Transcript ID] ENST00000420421 [bp] 331 [Protein] 73aa [Translation ID] ENSP00000391136 [CCDS] - [UniProt] C9J4L1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-005 [Transcript ID] ENST00000342075 [bp] 3012 [Protein] 108aa [Translation ID] ENSP00000343888 [CCDS] - [UniProt] F8W8L1 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-002 [Transcript ID] ENST00000450931 [bp] 2817 [Protein] 659aa [Translation ID] ENSP00000406225 [CCDS] - [UniProt] Q3BDU3 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-008 [Transcript ID] ENST00000447734 [bp] 570 [Protein] 47aa [Translation ID] ENSP00000411151 [CCDS] - [UniProt] Q5FBZ7 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-012 [Transcript ID] ENST00000421722 [bp] 2285 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-009 [Transcript ID] ENST00000424059 [bp] 2004 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
ea291b60_pt__PMS1_004__ENST00000409985___Biotype
|
[Name] PMS1-017 [Transcript ID] ENST00000483293 [bp] 663 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PMS1-004 (ENST00000409985)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064933;r=2:189784450-189807054;t=ENST00000409985
|
46/1438042988922.24_20150728002308-00006-ip-10-236-191-2_426938530_0.json
|
a9f3c100_t__UCHL1_012__ENST00000512788___Biotype
|
[Name] UCHL1-001 [Transcript ID] ENST00000284440 [bp] 1172 [Protein] 223aa [Translation ID] ENSP00000284440 [CCDS] CCDS3462 [UniProt] P09936 V9HW74 [RefSeq] NM_004181 NP_004172 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: UCHL1-012 (ENST00000512788)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000154277;r=4:41258430-41270472;t=ENST00000512788
|
46/1438042988922.24_20150728002308-00010-ip-10-236-191-2_437469403_0.json
|
a9f3c100_t__UCHL1_012__ENST00000512788___Biotype
|
[Name] UCHL1-005 [Transcript ID] ENST00000503431 [bp] 917 [Protein] 223aa [Translation ID] ENSP00000422542 [CCDS] CCDS3462 [UniProt] P09936 V9HW74 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: UCHL1-012 (ENST00000512788)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000154277;r=4:41258430-41270472;t=ENST00000512788
|
46/1438042988922.24_20150728002308-00010-ip-10-236-191-2_437469403_0.json
|
a9f3c100_t__UCHL1_012__ENST00000512788___Biotype
|
[Name] UCHL1-009 [Transcript ID] ENST00000508768 [bp] 827 [Protein] 207aa [Translation ID] ENSP00000426895 [CCDS] - [UniProt] D6RE83 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: UCHL1-012 (ENST00000512788)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000154277;r=4:41258430-41270472;t=ENST00000512788
|
46/1438042988922.24_20150728002308-00010-ip-10-236-191-2_437469403_0.json
|
a9f3c100_t__UCHL1_012__ENST00000512788___Biotype
|
[Name] UCHL1-012 [Transcript ID] ENST00000512788 [bp] 785 [Protein] 241aa [Translation ID] ENSP00000423623 [CCDS] - [UniProt] D6R956 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: UCHL1-012 (ENST00000512788)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000154277;r=4:41258430-41270472;t=ENST00000512788
|
46/1438042988922.24_20150728002308-00010-ip-10-236-191-2_437469403_0.json
|
a9f3c100_t__UCHL1_012__ENST00000512788___Biotype
|
[Name] UCHL1-007 [Transcript ID] ENST00000514924 [bp] 445 [Protein] 58aa [Translation ID] ENSP00000426634 [CCDS] - [UniProt] D6RF53 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: UCHL1-012 (ENST00000512788)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000154277;r=4:41258430-41270472;t=ENST00000512788
|
46/1438042988922.24_20150728002308-00010-ip-10-236-191-2_437469403_0.json
|
a9f3c100_t__UCHL1_012__ENST00000512788___Biotype
|
[Name] UCHL1-002 [Transcript ID] ENST00000512419 [bp] 1119 [Protein] 69aa [Translation ID] ENSP00000425714 [CCDS] - [UniProt] D6RJD9 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: UCHL1-012 (ENST00000512788)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000154277;r=4:41258430-41270472;t=ENST00000512788
|
46/1438042988922.24_20150728002308-00010-ip-10-236-191-2_437469403_0.json
|
a9f3c100_t__UCHL1_012__ENST00000512788___Biotype
|
[Name] UCHL1-010 [Transcript ID] ENST00000505232 [bp] 748 [Protein] 156aa [Translation ID] ENSP00000423348 [CCDS] - [UniProt] D6R974 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: UCHL1-012 (ENST00000512788)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000154277;r=4:41258430-41270472;t=ENST00000512788
|
46/1438042988922.24_20150728002308-00010-ip-10-236-191-2_437469403_0.json
|
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