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2cbfe2b6_t__RAD51_006__ENST00000526763___Biotype
[Name] RAD51-007 [Transcript ID] ENST00000527860 [bp] 566 [Protein] 172aa [Translation ID] ENSP00000432759 [CCDS] - [UniProt] E9PNT5 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-006 (ENST00000526763)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000051180;r=15:40695463-40701201;t=ENST00000526763
0/1438042988061.16_20150728002308-00197-ip-10-236-191-2_424886118_0.json
2cbfe2b6_t__RAD51_006__ENST00000526763___Biotype
[Name] RAD51-004 [Transcript ID] ENST00000525066 [bp] 1545 [Protein] 151aa [Translation ID] ENSP00000431864 [CCDS] - [UniProt] E9PJ30 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-006 (ENST00000526763)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000051180;r=15:40695463-40701201;t=ENST00000526763
0/1438042988061.16_20150728002308-00197-ip-10-236-191-2_424886118_0.json
2cbfe2b6_t__RAD51_006__ENST00000526763___Biotype
[Name] RAD51-010 [Transcript ID] ENST00000531277 [bp] 658 [Protein] 100aa [Translation ID] ENSP00000436512 [CCDS] - [UniProt] E9PI54 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-006 (ENST00000526763)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000051180;r=15:40695463-40701201;t=ENST00000526763
0/1438042988061.16_20150728002308-00197-ip-10-236-191-2_424886118_0.json
2cbfe2b6_t__RAD51_006__ENST00000526763___Biotype
[Name] RAD51-013 [Transcript ID] ENST00000533741 [bp] 425 [Protein] 65aa [Translation ID] ENSP00000433053 [CCDS] - [UniProt] H0YD61 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-006 (ENST00000526763)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000051180;r=15:40695463-40701201;t=ENST00000526763
0/1438042988061.16_20150728002308-00197-ip-10-236-191-2_424886118_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
20a987eb_t__PDPK1_002__ENST00000268673___Biotype
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-005 [Transcript ID] ENST00000452699 [bp] 3981 [Protein] 1175aa [Translation ID] ENSP00000413307 [CCDS] CCDS44073 [UniProt] Q9NQ11 [RefSeq] NM_001141973 NP_001135445 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-001 [Transcript ID] ENST00000326735 [bp] 3840 [Protein] 1180aa [Translation ID] ENSP00000327214 [CCDS] CCDS175 [UniProt] Q9NQ11 [RefSeq] NM_022089 NP_071372 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-002 [Transcript ID] ENST00000341676 [bp] 3681 [Protein] 1158aa [Translation ID] ENSP00000341115 [CCDS] CCDS44072 [UniProt] Q9NQ11 [RefSeq] NM_001141974 NP_001135446 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-201 [Transcript ID] ENST00000617114 [bp] 1723 [Protein] 228aa [Translation ID] ENSP00000478781 [CCDS] - [UniProt] A0A087WUM9 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-007 [Transcript ID] ENST00000502418 [bp] 1201 [Protein] 398aa [Translation ID] ENSP00000423065 [CCDS] - [UniProt] H0Y953 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-009 [Transcript ID] ENST00000510069 [bp] 962 [Protein] 321aa [Translation ID] ENSP00000424313 [CCDS] - [UniProt] H0Y9K0 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-014 [Transcript ID] ENST00000503552 [bp] 774 [Protein] 258aa [Translation ID] ENSP00000421126 [CCDS] - [UniProt] H0Y8I1 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-012 [Transcript ID] ENST00000506174 [bp] 573 [Protein] 191aa [Translation ID] ENSP00000424393 [CCDS] - [UniProt] H0Y9K4 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-010 [Transcript ID] ENST00000509619 [bp] 570 [Protein] 191aa [Translation ID] ENSP00000422668 [CCDS] - [UniProt] H0Y8Z6 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-011 [Transcript ID] ENST00000511957 [bp] 569 [Protein] 190aa [Translation ID] ENSP00000427241 [CCDS] - [UniProt] H0YAI7 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-008 [Transcript ID] ENST00000508222 [bp] 562 [Protein] 188aa [Translation ID] ENSP00000422227 [CCDS] - [UniProt] H0Y8V5 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-004 [Transcript ID] ENST00000466561 [bp] 1851 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-003 [Transcript ID] ENST00000463860 [bp] 1639 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-006 [Transcript ID] ENST00000502860 [bp] 687 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
f8181ec5__ATP13A2_014__ENST00000503552___Biotype
[Name] ATP13A2-013 [Transcript ID] ENST00000509392 [bp] 572 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-014 (ENST00000503552)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:17322529-17323189;t=ENST00000503552
0/1438042988458.74_20150728002308-00161-ip-10-236-191-2_425759242_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
4c3bc591__Gene__PDPK1__ENSG00000140992___Flags
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Marked-up sequence - Gene: PDPK1 (ENSG00000140992)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Sequence?db=core;g=ENSG00000140992;r=16:2587980-2631662;t=ENST00000566659
0/1438042988061.16_20150728002308-00092-ip-10-236-191-2_431563027_0.json
2305c1e8_t__GPER1_031__ENST00000397088___Flags
[Name] GPER1-201 [Transcript ID] ENST00000397092 [bp] 2971 [Protein] 375aa [Translation ID] ENSP00000380281 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5322 [UniProt] A0A024R849 Q99527 [RefSeq] NM_001039966 NP_001035055 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GPER1-031 (ENST00000397088)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000164850;r=7:1088087-1093810;t=ENST00000397088
0/1438042988458.74_20150728002308-00066-ip-10-236-191-2_431535646_0.json
2305c1e8_t__GPER1_031__ENST00000397088___Flags
[Name] GPER1-030 [Transcript ID] ENST00000297469 [bp] 2778 [Protein] 375aa [Translation ID] ENSP00000297469 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5322 [UniProt] A0A024R849 Q99527 [RefSeq] NM_001505 NP_001496 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GPER1-031 (ENST00000397088)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000164850;r=7:1088087-1093810;t=ENST00000397088
0/1438042988458.74_20150728002308-00066-ip-10-236-191-2_431535646_0.json
2305c1e8_t__GPER1_031__ENST00000397088___Flags
[Name] GPER1-031 [Transcript ID] ENST00000397088 [bp] 2639 [Protein] 375aa [Translation ID] ENSP00000380277 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5322 [UniProt] A0A024R849 Q99527 [RefSeq] NM_001098201 NP_001091671 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GPER1-031 (ENST00000397088)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000164850;r=7:1088087-1093810;t=ENST00000397088
0/1438042988458.74_20150728002308-00066-ip-10-236-191-2_431535646_0.json
2305c1e8_t__GPER1_031__ENST00000397088___Flags
[Name] GPER1-032 [Transcript ID] ENST00000401670 [bp] 1542 [Protein] 375aa [Translation ID] ENSP00000385151 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5322 [UniProt] A0A024R849 Q99527 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GPER1-031 (ENST00000397088)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000164850;r=7:1088087-1093810;t=ENST00000397088
0/1438042988458.74_20150728002308-00066-ip-10-236-191-2_431535646_0.json
2305c1e8_t__GPER1_031__ENST00000397088___Flags
[Name] GPER1-202 [Transcript ID] ENST00000617001 [bp] 1900 [Protein] 408aa [Translation ID] ENSP00000479553 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WVN0 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GPER1-031 (ENST00000397088)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000164850;r=7:1088087-1093810;t=ENST00000397088
0/1438042988458.74_20150728002308-00066-ip-10-236-191-2_431535646_0.json
2305c1e8_t__GPER1_031__ENST00000397088___Flags
[Name] GPER1-033 [Transcript ID] ENST00000413368 [bp] 1105 [Protein] 73aa [Translation ID] ENSP00000410487 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9J3W2 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GPER1-031 (ENST00000397088)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000164850;r=7:1088087-1093810;t=ENST00000397088
0/1438042988458.74_20150728002308-00066-ip-10-236-191-2_431535646_0.json
2305c1e8_t__GPER1_031__ENST00000397088___Flags
[Name] GPER1-203 [Transcript ID] ENST00000619052 [bp] 571 [Protein] 176aa [Translation ID] ENSP00000483756 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X0Z4 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GPER1-031 (ENST00000397088)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000164850;r=7:1088087-1093810;t=ENST00000397088
0/1438042988458.74_20150728002308-00066-ip-10-236-191-2_431535646_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
80fe0daf_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - ID History - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Idhistory/Protein?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000268673
0/1438042988458.74_20150728002308-00070-ip-10-236-191-2_427076305_0.json
2868b261_Gene__PIK3R3__ENSG00000117461___Flags
[Name] PIK3R3-001 [Transcript ID] ENST00000262741 [bp] 5609 [Protein] 461aa [Translation ID] ENSP00000262741 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS529 [UniProt] Q92569 [RefSeq] NM_003629 NP_003620 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: PIK3R3 (ENSG00000117461)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000117461;r=1:46040140-46133036
0/1438042988061.16_20150728002308-00087-ip-10-236-191-2_431504657_0.json
2868b261_Gene__PIK3R3__ENSG00000117461___Flags
[Name] PIK3R3-201 [Transcript ID] ENST00000420542 [bp] 5174 [Protein] 461aa [Translation ID] ENSP00000412546 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS529 [UniProt] Q92569 [RefSeq] NM_001114172 NP_001107644 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: PIK3R3 (ENSG00000117461)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000117461;r=1:46040140-46133036
0/1438042988061.16_20150728002308-00087-ip-10-236-191-2_431504657_0.json
2868b261_Gene__PIK3R3__ENSG00000117461___Flags
[Name] PIK3R3-002 [Transcript ID] ENST00000372006 [bp] 5019 [Protein] 461aa [Translation ID] ENSP00000361075 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS529 [UniProt] Q92569 [RefSeq] NM_001303428 NP_001290357 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: PIK3R3 (ENSG00000117461)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000117461;r=1:46040140-46133036
0/1438042988061.16_20150728002308-00087-ip-10-236-191-2_431504657_0.json
2868b261_Gene__PIK3R3__ENSG00000117461___Flags
[Name] PIK3R3-004 [Transcript ID] ENST00000423209 [bp] 1884 [Protein] 402aa [Translation ID] ENSP00000391431 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS76154 [UniProt] Q92569 [RefSeq] NM_001303429 NP_001290358 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: PIK3R3 (ENSG00000117461)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000117461;r=1:46040140-46133036
0/1438042988061.16_20150728002308-00087-ip-10-236-191-2_431504657_0.json
2868b261_Gene__PIK3R3__ENSG00000117461___Flags
[Name] PIK3R3-005 [Transcript ID] ENST00000425892 [bp] 753 [Protein] 206aa [Translation ID] ENSP00000416647 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q5T4P3 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: PIK3R3 (ENSG00000117461)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000117461;r=1:46040140-46133036
0/1438042988061.16_20150728002308-00087-ip-10-236-191-2_431504657_0.json
2868b261_Gene__PIK3R3__ENSG00000117461___Flags
[Name] PIK3R3-003 [Transcript ID] ENST00000488808 [bp] 3117 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: PIK3R3 (ENSG00000117461)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000117461;r=1:46040140-46133036
0/1438042988061.16_20150728002308-00087-ip-10-236-191-2_431504657_0.json
2868b261_Gene__PIK3R3__ENSG00000117461___Flags
[Name] PIK3R3-006 [Transcript ID] ENST00000493202 [bp] 765 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: PIK3R3 (ENSG00000117461)
Flags
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000117461;r=1:46040140-46133036
0/1438042988061.16_20150728002308-00087-ip-10-236-191-2_431504657_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-001 [Transcript ID] ENST00000302746 [bp] 1527 [Protein] 359aa [Translation ID] ENSP00000307241 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS2890 [UniProt] P11177 [RefSeq] NM_000925 NP_000916 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-005 [Transcript ID] ENST00000485460 [bp] 1397 [Protein] 341aa [Translation ID] ENSP00000417267 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54602 [UniProt] P11177 [RefSeq] NM_001173468 NP_001166939 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-007 [Transcript ID] ENST00000474765 [bp] 1503 [Protein] 350aa [Translation ID] ENSP00000418448 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9J634 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-008 [Transcript ID] ENST00000383714 [bp] 1478 [Protein] 341aa [Translation ID] ENSP00000373220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P11177 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-006 [Transcript ID] ENST00000469364 [bp] 1616 [Protein] 251aa [Translation ID] ENSP00000419580 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] F8WF02 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-003 [Transcript ID] ENST00000479945 [bp] 4459 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-002 [Transcript ID] ENST00000461692 [bp] 1535 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] NR_033384 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-011 [Transcript ID] ENST00000480626 [bp] 710 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-009 [Transcript ID] ENST00000469827 [bp] 586 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
b1dfc4e3_pt__PDHB_005__ENST00000485460___Flags
[Name] PDHB-010 [Transcript ID] ENST00000482894 [bp] 581 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDHB-005 (ENST00000485460)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168291;r=3:58427672-58433818;t=ENST00000485460
0/1438042988458.74_20150728002308-00337-ip-10-236-191-2_429508853_0.json
161852e6_t__PDPK1_010__ENST00000464702___Biotype
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-010 (ENST00000464702)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000464702
0/1438042988061.16_20150728002308-00273-ip-10-236-191-2_414759150_0.json
161852e6_t__PDPK1_010__ENST00000464702___Biotype
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-010 (ENST00000464702)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000464702
0/1438042988061.16_20150728002308-00273-ip-10-236-191-2_414759150_0.json
161852e6_t__PDPK1_010__ENST00000464702___Biotype
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-010 (ENST00000464702)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000464702
0/1438042988061.16_20150728002308-00273-ip-10-236-191-2_414759150_0.json
161852e6_t__PDPK1_010__ENST00000464702___Biotype
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-010 (ENST00000464702)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000464702
0/1438042988061.16_20150728002308-00273-ip-10-236-191-2_414759150_0.json
161852e6_t__PDPK1_010__ENST00000464702___Biotype
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-010 (ENST00000464702)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000464702
0/1438042988061.16_20150728002308-00273-ip-10-236-191-2_414759150_0.json
161852e6_t__PDPK1_010__ENST00000464702___Biotype
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-010 (ENST00000464702)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000464702
0/1438042988061.16_20150728002308-00273-ip-10-236-191-2_414759150_0.json