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5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
5a90c1f7_t__PDPK1_014__ENST00000570136___Biotype
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-014 (ENST00000570136)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2588022-2612228;t=ENST00000570136
20/1438042987174.71_20150728002307-00163-ip-10-236-191-2_426324280_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-001 [Transcript ID] ENST00000493678 [bp] 1088 [Protein] 189aa [Translation ID] ENSP00000418770 [CCDS] CCDS93 [UniProt] Q99497 V9HWC2 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-005 [Transcript ID] ENST00000377491 [bp] 977 [Protein] 189aa [Translation ID] ENSP00000366711 [CCDS] CCDS93 [UniProt] Q99497 V9HWC2 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-002 [Transcript ID] ENST00000338639 [bp] 949 [Protein] 189aa [Translation ID] ENSP00000340278 [CCDS] CCDS93 [UniProt] Q99497 V9HWC2 [RefSeq] NM_001123377 NM_007262 NP_001116849 NP_009193 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-006 [Transcript ID] ENST00000377488 [bp] 783 [Protein] 189aa [Translation ID] ENSP00000366708 [CCDS] CCDS93 [UniProt] Q99497 V9HWC2 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-003 [Transcript ID] ENST00000377493 [bp] 795 [Protein] 169aa [Translation ID] ENSP00000466242 [CCDS] - [UniProt] K7ELW0 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-010 [Transcript ID] ENST00000469225 [bp] 711 [Protein] 160aa [Translation ID] ENSP00000466756 [CCDS] - [UniProt] K7EN27 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-004 [Transcript ID] ENST00000493373 [bp] 624 [Protein] 189aa [Translation ID] ENSP00000465404 [CCDS] - [UniProt] Q99497 V9HWC2 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-009 [Transcript ID] ENST00000497113 [bp] 670 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-008 [Transcript ID] ENST00000465354 [bp] 949 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
9c0dd873_t__PARK7_007__ENST00000460192___Biotype
[Name] PARK7-007 [Transcript ID] ENST00000460192 [bp] 567 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PARK7-007 (ENST00000460192)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116288;r=1:8021808-8031581;t=ENST00000460192
20/1438042987174.71_20150728002307-00155-ip-10-236-191-2_421950188_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-006 [Transcript ID] ENST00000403687 [bp] 4807 [Protein] 690aa [Translation ID] ENSP00000384192 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46256 [UniProt] Q8IV61 [RefSeq] NM_001139488 NP_001132960 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-001 [Transcript ID] ENST00000402538 [bp] 4738 [Protein] 690aa [Translation ID] ENSP00000385886 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46256 [UniProt] Q8IV61 [RefSeq] NM_170672 NP_733772 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-004 [Transcript ID] ENST00000407811 [bp] 4210 [Protein] 689aa [Translation ID] ENSP00000383917 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54346 [UniProt] A0A0A6YYA9 [RefSeq] NM_015376 NP_056191 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-007 [Transcript ID] ENST00000437184 [bp] 861 [Protein] 172aa [Translation ID] ENSP00000393866 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9K0P4 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-012 [Transcript ID] ENST00000442390 [bp] 596 [Protein] 77aa [Translation ID] ENSP00000405648 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9J9C9 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-013 [Transcript ID] ENST00000423159 [bp] 557 [Protein] 113aa [Translation ID] ENSP00000388139 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JWP0 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-014 [Transcript ID] ENST00000444784 [bp] 554 [Protein] 112aa [Translation ID] ENSP00000400602 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9IYA5 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-008 [Transcript ID] ENST00000425210 [bp] 540 [Protein] 34aa [Translation ID] ENSP00000401974 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JSS2 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-019 [Transcript ID] ENST00000419772 [bp] 548 [Protein] 138aa [Translation ID] ENSP00000409593 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H7C352 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-020 [Transcript ID] ENST00000482731 [bp] 574 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-009 [Transcript ID] ENST00000497723 [bp] 558 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-018 [Transcript ID] ENST00000477927 [bp] 477 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-005 [Transcript ID] ENST00000468856 [bp] 3764 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-002 [Transcript ID] ENST00000484909 [bp] 2144 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-015 [Transcript ID] ENST00000494927 [bp] 875 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-011 [Transcript ID] ENST00000482857 [bp] 688 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-010 [Transcript ID] ENST00000479528 [bp] 631 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
da2a5dfa__RASGRP3_006__ENST00000403687___Flags
[Name] RASGRP3-017 [Transcript ID] ENST00000490150 [bp] 566 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RASGRP3-006 (ENST00000403687)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000152689;r=2:33476228-33564731;t=ENST00000403687
20/1438042989234.2_20150728002309-00196-ip-10-236-191-2_426224446_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-004 [Transcript ID] ENSMUST00000179658 [bp] 1079 [Protein] 272aa [Translation ID] ENSMUSP00000136278 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS52452 [UniProt] Z4YNB2 [RefSeq] NM_001163664 NP_001157136 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-001 [Transcript ID] ENSMUST00000078497 [bp] 1067 [Protein] 268aa [Translation ID] ENSMUSP00000077587 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS52454 [UniProt] Z4YJU0 [RefSeq] NM_001163667 NP_001157139 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-005 [Transcript ID] ENSMUST00000105954 [bp] 1052 [Protein] 263aa [Translation ID] ENSMUSP00000101574 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS52456 [UniProt] Z4YKG8 [RefSeq] NM_001163666 NP_001157138 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-006 [Transcript ID] ENSMUST00000105958 [bp] 1050 [Protein] 272aa [Translation ID] ENSMUSP00000101578 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS52451 [UniProt] - [RefSeq] NM_001163665 NP_001157137 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-007 [Transcript ID] ENSMUST00000105952 [bp] 1040 [Protein] 259aa [Translation ID] ENSMUSP00000101572 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS52453 [UniProt] Z4YKF8 [RefSeq] NM_001163669 NP_001157141 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-008 [Transcript ID] ENSMUST00000105955 [bp] 1028 [Protein] 255aa [Translation ID] ENSMUSP00000101575 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS52455 [UniProt] A2A6H6 [RefSeq] NM_001163668 NP_001157140 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-201 [Transcript ID] ENSMUST00000074187 [bp] 1007 [Protein] 248aa [Translation ID] ENSMUSP00000073815 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS22031 [UniProt] - [RefSeq] NM_011620 NP_035750 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-009 [Transcript ID] ENSMUST00000105949 [bp] 955 [Protein] 244aa [Translation ID] ENSMUSP00000101569 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS52457 [UniProt] A2A6J0 [RefSeq] NM_001163670 NP_001157142 [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-016 [Transcript ID] ENSMUST00000105945 [bp] 747 [Protein] 248aa [Translation ID] ENSMUSP00000101565 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS22031 [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-205 [Transcript ID] ENSMUST00000180152 [bp] 1067 [Protein] 272aa [Translation ID] ENSMUSP00000137111 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] J3QP61 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-002 [Transcript ID] ENSMUST00000105953 [bp] 1049 [Protein] 262aa [Translation ID] ENSMUSP00000101573 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Z4YKG3 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-202 [Transcript ID] ENSMUST00000105950 [bp] 1037 [Protein] 262aa [Translation ID] ENSMUSP00000101570 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Z4YKE7 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-203 [Transcript ID] ENSMUST00000105957 [bp] 1028 [Protein] 259aa [Translation ID] ENSMUSP00000101577 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Z4YKH8 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-204 [Transcript ID] ENSMUST00000169299 [bp] 1013 [Protein] 254aa [Translation ID] ENSMUSP00000127854 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-011 [Transcript ID] ENSMUST00000105947 [bp] 780 [Protein] 259aa [Translation ID] ENSMUSP00000101567 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Z4YKD9 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-014 [Transcript ID] ENSMUST00000105946 [bp] 765 [Protein] 254aa [Translation ID] ENSMUSP00000101566 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-015 [Transcript ID] ENSMUST00000105948 [bp] 753 [Protein] 250aa [Translation ID] ENSMUSP00000101568 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2A6I0 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-017 [Transcript ID] ENSMUST00000105944 [bp] 753 [Protein] 250aa [Translation ID] ENSMUSP00000101564 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2A6J1 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-013 [Transcript ID] ENSMUST00000105941 [bp] 747 [Protein] 248aa [Translation ID] ENSMUSP00000101561 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2A6I3 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-010 [Transcript ID] ENSMUST00000105942 [bp] 720 [Protein] 239aa [Translation ID] ENSMUSP00000101562 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2A6I8 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-012 [Transcript ID] ENSMUST00000105943 [bp] 720 [Protein] 239aa [Translation ID] ENSMUSP00000101563 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2A6I5 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-021 [Transcript ID] ENSMUST00000146804 [bp] 642 [Protein] 214aa [Translation ID] ENSMUSP00000116087 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F6RL36 [RefSeq] - [Flags]
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-020 [Transcript ID] ENSMUST00000128294 [bp] 342 [Protein] 107aa [Translation ID] ENSMUSP00000116223 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2A6J2 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-003 [Transcript ID] ENSMUST00000125649 [bp] 1011 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-019 [Transcript ID] ENSMUST00000153262 [bp] 635 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
ad34700d_ne__Tnnt3__ENSMUSG00000061723___Flags
[Name] Tnnt3-018 [Transcript ID] ENSMUST00000144259 [bp] 471 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Mus musculus - Summary - Gene: Tnnt3 (ENSMUSG00000061723)
Flags
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000061723;r=7:142498836-142516009
20/1438042989234.2_20150728002309-00023-ip-10-236-191-2_437757122_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-001 [Transcript ID] ENST00000284440 [bp] 1172 [Protein] 223aa [Translation ID] ENSP00000284440 [CCDS] CCDS3462 [UniProt] P09936 V9HW74 [RefSeq] NM_004181 NP_004172 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-005 [Transcript ID] ENST00000503431 [bp] 917 [Protein] 223aa [Translation ID] ENSP00000422542 [CCDS] CCDS3462 [UniProt] P09936 V9HW74 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-009 [Transcript ID] ENST00000508768 [bp] 827 [Protein] 207aa [Translation ID] ENSP00000426895 [CCDS] - [UniProt] D6RE83 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-012 [Transcript ID] ENST00000512788 [bp] 785 [Protein] 241aa [Translation ID] ENSP00000423623 [CCDS] - [UniProt] D6R956 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-007 [Transcript ID] ENST00000514924 [bp] 445 [Protein] 58aa [Translation ID] ENSP00000426634 [CCDS] - [UniProt] D6RF53 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-002 [Transcript ID] ENST00000512419 [bp] 1119 [Protein] 69aa [Translation ID] ENSP00000425714 [CCDS] - [UniProt] D6RJD9 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-010 [Transcript ID] ENST00000505232 [bp] 748 [Protein] 156aa [Translation ID] ENSP00000423348 [CCDS] - [UniProt] D6R974 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-011 [Transcript ID] ENST00000504818 [bp] 726 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-003 [Transcript ID] ENST00000381760 [bp] 1578 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-004 [Transcript ID] ENST00000472501 [bp] 1550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-006 [Transcript ID] ENST00000514764 [bp] 862 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
3950e852_t__UCHL1_011__ENST00000504818___Biotype
[Name] UCHL1-008 [Transcript ID] ENST00000510566 [bp] 540 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Comparison image - Transcript: UCHL1-011 (ENST00000504818)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Population/Image?db=core;g=ENSG00000154277;r=4:41258950-41263940;t=ENST00000504818
20/1438042989234.2_20150728002309-00172-ip-10-236-191-2_440567468_0.json
cdcfd469_pt__TERT_005__ENST00000334602___Flags
[Name] TERT-001 [Transcript ID] ENST00000310581 [bp] 4018 [Protein] 1132aa [Translation ID] ENSP00000309572 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3861 [UniProt] O14746 [RefSeq] NM_198253 NP_937983 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-005 (ENST00000334602)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1253728-1294989;t=ENST00000334602
20/1438042987174.71_20150728002307-00079-ip-10-236-191-2_425858736_0.json
cdcfd469_pt__TERT_005__ENST00000334602___Flags
[Name] TERT-005 [Transcript ID] ENST00000334602 [bp] 3210 [Protein] 1069aa [Translation ID] ENSP00000334346 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54831 [UniProt] O14746 [RefSeq] NM_001193376 NP_001180305 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-005 (ENST00000334602)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1253728-1294989;t=ENST00000334602
20/1438042987174.71_20150728002307-00079-ip-10-236-191-2_425858736_0.json
cdcfd469_pt__TERT_005__ENST00000334602___Flags
[Name] TERT-006 [Transcript ID] ENST00000508104 [bp] 2486 [Protein] 807aa [Translation ID] ENSP00000426042 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O14746 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-005 (ENST00000334602)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1253728-1294989;t=ENST00000334602
20/1438042987174.71_20150728002307-00079-ip-10-236-191-2_425858736_0.json
cdcfd469_pt__TERT_005__ENST00000334602___Flags
[Name] TERT-004 [Transcript ID] ENST00000460137 [bp] 2992 [Protein] 795aa [Translation ID] ENSP00000425003 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] O14746 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-005 (ENST00000334602)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1253728-1294989;t=ENST00000334602
20/1438042987174.71_20150728002307-00079-ip-10-236-191-2_425858736_0.json
cdcfd469_pt__TERT_005__ENST00000334602___Flags
[Name] TERT-008 [Transcript ID] ENST00000522877 [bp] 408 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-005 (ENST00000334602)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1253728-1294989;t=ENST00000334602
20/1438042987174.71_20150728002307-00079-ip-10-236-191-2_425858736_0.json
cdcfd469_pt__TERT_005__ENST00000334602___Flags
[Name] TERT-003 [Transcript ID] ENST00000484238 [bp] 2422 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-005 (ENST00000334602)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1253728-1294989;t=ENST00000334602
20/1438042987174.71_20150728002307-00079-ip-10-236-191-2_425858736_0.json
cdcfd469_pt__TERT_005__ENST00000334602___Flags
[Name] TERT-007 [Transcript ID] ENST00000503656 [bp] 406 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-005 (ENST00000334602)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1253728-1294989;t=ENST00000334602
20/1438042987174.71_20150728002307-00079-ip-10-236-191-2_425858736_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-001 [Transcript ID] ENST00000361874 [bp] 4500 [Protein] 1278aa [Translation ID] ENSP00000354791 [CCDS] CCDS1939 [UniProt] Q14203 [RefSeq] NM_004082 NP_004073 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-201 [Transcript ID] ENST00000394003 [bp] 4479 [Protein] 1271aa [Translation ID] ENSP00000377571 [CCDS] CCDS54369 [UniProt] Q14203 [RefSeq] NM_001190837 NP_001177766 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-006 [Transcript ID] ENST00000409240 [bp] 4365 [Protein] 1236aa [Translation ID] ENSP00000386406 [CCDS] CCDS54368 [UniProt] Q14203 [RefSeq] NM_001190836 NP_001177765 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-004 [Transcript ID] ENST00000409438 [bp] 4145 [Protein] 1139aa [Translation ID] ENSP00000387270 [CCDS] CCDS46342 [UniProt] Q14203 [RefSeq] NM_001135041 NP_001128513 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-002 [Transcript ID] ENST00000409567 [bp] 4024 [Protein] 1253aa [Translation ID] ENSP00000386843 [CCDS] CCDS46341 [UniProt] Q14203 [RefSeq] NM_001135040 NP_001128512 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-202 [Transcript ID] ENST00000628224 [bp] 4485 [Protein] 1256aa [Translation ID] ENSP00000487279 [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-007 [Transcript ID] ENST00000409868 [bp] 4202 [Protein] 1256aa [Translation ID] ENSP00000387327 [CCDS] - [UniProt] E7EX90 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-028 [Transcript ID] ENST00000633691 [bp] 4160 [Protein] 1144aa [Translation ID] ENSP00000487724 [CCDS] - [UniProt] - [RefSeq] NM_023019 NP_075408 [Flags] The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-017 [Transcript ID] ENST00000454119 [bp] 627 [Protein] 121aa [Translation ID] ENSP00000404038 [CCDS] - [UniProt] C9JJD0 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-013 [Transcript ID] ENST00000437375 [bp] 598 [Protein] 87aa [Translation ID] ENSP00000395312 [CCDS] - [UniProt] C9JJN7 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json
f97a4a02_t__DCTN1_025__ENST00000495643___Biotype
[Name] DCTN1-018 [Transcript ID] ENST00000413111 [bp] 593 [Protein] 76aa [Translation ID] ENSP00000413268 [CCDS] - [UniProt] C9JZA4 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: DCTN1-025 (ENST00000495643)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204843;r=2:74365972-74368013;t=ENST00000495643
20/1438042987174.71_20150728002307-00336-ip-10-236-191-2_413603619_0.json