Datasets:
MicPie
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unpredictable_ensembl-org

Dataset card Data Studio Files Community
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9f82623f___PRKACA_006__ENST00000593092___Name
[Transcript ID] ENST00000587372 [bp] 824 [Protein] 251aa [Translation ID] ENSP00000468352 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7ERP6 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name]
PRKACA-010
[ [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "1" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "3" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "2" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "6" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "1", "0" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "8" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "5" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "7" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "4" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "9" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-006 (ENST00000593092)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14202848-14228544;t=ENST00000593092
3/1438042988250.59_20150728002308-00281-ip-10-236-191-2_414110104_0.json
9f82623f___PRKACA_006__ENST00000593092___Name
[Transcript ID] ENST00000589284 [bp] 403 [Protein] 25aa [Translation ID] ENSP00000466660 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EMV1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Name]
PRKACA-008
[ [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "1" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "3" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "2" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "6" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "1", "0" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "8" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "5" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "7" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "4" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "9" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-006 (ENST00000593092)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14202848-14228544;t=ENST00000593092
3/1438042988250.59_20150728002308-00281-ip-10-236-191-2_414110104_0.json
9f82623f___PRKACA_006__ENST00000593092___Name
[Transcript ID] ENST00000350356 [bp] 3105 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Name]
PRKACA-005
[ [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "1" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "3" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "2" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "6" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "1", "0" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "8" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "5" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "7" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "4" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "9" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-006 (ENST00000593092)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14202848-14228544;t=ENST00000593092
3/1438042988250.59_20150728002308-00281-ip-10-236-191-2_414110104_0.json
9f82623f___PRKACA_006__ENST00000593092___Name
[Transcript ID] ENST00000587533 [bp] 2095 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA [Name]
PRKACA-007
[ [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "1" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "3" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "2" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "6" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "1", "0" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "8" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "5" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "7" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "4" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "9" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-006 (ENST00000593092)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14202848-14228544;t=ENST00000593092
3/1438042988250.59_20150728002308-00281-ip-10-236-191-2_414110104_0.json
9f82623f___PRKACA_006__ENST00000593092___Name
[Transcript ID] ENST00000536649 [bp] 1524 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Name]
PRKACA-004
[ [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "1" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "3" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "2" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "6" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "1", "0" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "8" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "5" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "7" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "4" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "9" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-006 (ENST00000593092)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14202848-14228544;t=ENST00000593092
3/1438042988250.59_20150728002308-00281-ip-10-236-191-2_414110104_0.json
9f82623f___PRKACA_006__ENST00000593092___Name
[Transcript ID] ENST00000588209 [bp] 942 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Name]
PRKACA-009
[ [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "1" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "3" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "2" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "6" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "1", "0" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "8" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "5" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "7" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "4" ], [ "P", "R", "K", "A", "C", "A", "-", "0", "0", "9" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-006 (ENST00000593092)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14202848-14228544;t=ENST00000593092
3/1438042988250.59_20150728002308-00281-ip-10-236-191-2_414110104_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-201 [Transcript ID] ENST00000540479 [bp] 4603 [Protein] 120aa [Translation ID] ENSP00000438177 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS66808 [UniProt] Q96GE6 [RefSeq] NM_001286694 NP_001273623 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-003 [Transcript ID] ENST00000448060 [bp] 2520 [Protein] 149aa [Translation ID] ENSP00000400755 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS42052 [UniProt] Q96GE6 [RefSeq] NM_001031733 NP_001026903 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-001 [Transcript ID] ENST00000467889 [bp] 987 [Protein] 196aa [Translation ID] ENSP00000419081 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10226 [UniProt] Q96GE6 [RefSeq] NM_033429 NP_219501 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-002 [Transcript ID] ENST00000395465 [bp] 4155 [Protein] 59aa [Translation ID] ENSP00000378848 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q96GE6 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-007 [Transcript ID] ENST00000354678 [bp] 611 [Protein] 88aa [Translation ID] ENSP00000456532 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BS46 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-004 [Transcript ID] ENST00000478113 [bp] 3651 [Protein] 29aa [Translation ID] ENSP00000432629 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BM27 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-005 [Transcript ID] ENST00000395463 [bp] 1445 [Protein] 60aa [Translation ID] ENSP00000435285 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BM29 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
459a91c4___CALML4_003__ENST00000448060___Flags
[Name] CALML4-006 [Transcript ID] ENST00000467188 [bp] 620 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CALML4-003 (ENST00000448060)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000129007;r=15:68192057-68205488;t=ENST00000448060
3/1438042988250.59_20150728002308-00256-ip-10-236-191-2_427548468_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
fd5033e1_t__PDPK1_013__ENST00000441549___Biotype
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variations - Transcript: PDPK1-013 (ENST00000441549)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/ProtVariations?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
3/1438042988250.59_20150728002308-00305-ip-10-236-191-2_430781661_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-001 [Transcript ID] ENST00000308192 [bp] 2741 [Protein] 810aa [Translation ID] ENSP00000308938 [CCDS] CCDS5279 [UniProt] P00747 [RefSeq] NM_000301 NP_000292 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-002 [Transcript ID] ENST00000366924 [bp] 1166 [Protein] 136aa [Translation ID] ENSP00000355891 [CCDS] CCDS55074 [UniProt] Q5TEH5 [RefSeq] NM_001168338 NP_001161810 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-006 [Transcript ID] ENST00000418964 [bp] 558 [Protein] 166aa [Translation ID] ENSP00000389424 [CCDS] - [UniProt] A6PVI2 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-004 [Transcript ID] ENST00000462918 [bp] 835 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-010 [Transcript ID] ENST00000494325 [bp] 772 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-005 [Transcript ID] ENST00000483038 [bp] 757 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-008 [Transcript ID] ENST00000461414 [bp] 661 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-003 [Transcript ID] ENST00000297289 [bp] 435 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-009 [Transcript ID] ENST00000484367 [bp] 2465 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-007 [Transcript ID] ENST00000471691 [bp] 786 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-011 [Transcript ID] ENST00000493435 [bp] 582 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
9b1936ef____Gene__PLG__ENSG00000122194___Biotype
[Name] PLG-012 [Transcript ID] ENST00000467466 [bp] 565 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: PLG (ENSG00000122194)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000122194;r=6:160702238-160753315
3/1438042982745.46_20150728002302-00117-ip-10-236-191-2_427505180_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-001 [Transcript ID] ENST00000395650 [bp] 2662 [Protein] 772aa [Translation ID] ENSP00000379011 [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_004377 NP_004368 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-005 [Transcript ID] ENST00000405237 [bp] 2647 [Protein] 772aa [Translation ID] ENSP00000385486 [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_001145135 NM_001145137 NM_152245 NP_001138607 NP_001138609 NP_689451 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-004 [Transcript ID] ENST00000312108 [bp] 2592 [Protein] 772aa [Translation ID] ENSP00000312189 [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_152246 NP_689452 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-201 [Transcript ID] ENST00000360719 [bp] 2319 [Protein] 772aa [Translation ID] ENSP00000353945 [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-202 [Transcript ID] ENST00000457250 [bp] 2217 [Protein] 738aa [Translation ID] ENSP00000409342 [CCDS] CCDS46734 [UniProt] Q92523 [RefSeq] NM_001145134 NP_001138606 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-008 [Transcript ID] ENST00000417176 [bp] 558 [Protein] 125aa [Translation ID] ENSP00000406316 [CCDS] - [UniProt] C9J7C3 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-020 [Transcript ID] ENST00000423069 [bp] 719 [Protein] 92aa [Translation ID] ENSP00000396408 [CCDS] - [UniProt] H7C0S1 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-014 [Transcript ID] ENST00000497224 [bp] 806 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-007 [Transcript ID] ENST00000460853 [bp] 757 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-013 [Transcript ID] ENST00000475238 [bp] 572 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-010 [Transcript ID] ENST00000476790 [bp] 563 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-009 [Transcript ID] ENST00000461117 [bp] 562 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
ab7dd7a7_t__CPT1B_005__ENST00000405237___Biotype
[Name] CPT1B-011 [Transcript ID] ENST00000479886 [bp] 545 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: CPT1B-005 (ENST00000405237)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000405237
19/1438042988650.6_20150728002308-00072-ip-10-236-191-2_435693193_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
70e032fd_t__PDPK1_009__ENST00000460496___Flags
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Exons - Transcript: PDPK1-009 (ENST00000460496)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000140992;r=16:2588021-2611531;t=ENST00000460496
19/1438044160065.87_20150728004240-00039-ip-10-236-191-2_429475072_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
c6d3c7e1_t__PDPK1_002__ENST00000268673___Flags
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - GO graph - Transcript: PDPK1-002 (ENST00000268673)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Image?db=core;g=ENSG00000140992;r=16:2588022-2611502;t=ENST00000268673
19/1438044160065.87_20150728004240-00261-ip-10-236-191-2_427681369_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-001 [Transcript ID] ENST00000390652 [bp] 3531 [Protein] 928aa [Translation ID] ENSP00000375067 [CCDS] CCDS45749 [UniProt] Q9H6U6 [RefSeq] NM_001099432 NP_001092902 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-002 [Transcript ID] ENST00000407086 [bp] 3496 [Protein] 913aa [Translation ID] ENSP00000385323 [CCDS] CCDS11626 [UniProt] Q9H6U6 [RefSeq] NM_017679 NP_060149 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-004 [Transcript ID] ENST00000589222 [bp] 3673 [Protein] 928aa [Translation ID] ENSP00000466078 [CCDS] - [UniProt] Q9H6U6 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-012 [Transcript ID] ENST00000588462 [bp] 3559 [Protein] 950aa [Translation ID] ENSP00000468592 [CCDS] - [UniProt] Q9H6U6 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-013 [Transcript ID] ENST00000408905 [bp] 3514 [Protein] 935aa [Translation ID] ENSP00000386173 [CCDS] - [UniProt] Q9H6U6 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-006 [Transcript ID] ENST00000588874 [bp] 2948 [Protein] 684aa [Translation ID] ENSP00000464825 [CCDS] - [UniProt] Q9H6U6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-005 [Transcript ID] ENST00000585744 [bp] 2203 [Protein] 699aa [Translation ID] ENSP00000468682 [CCDS] - [UniProt] K7ESE9 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-201 [Transcript ID] ENST00000613443 [bp] 1995 [Protein] 665aa [Translation ID] ENSP00000485015 [CCDS] - [UniProt] A0A087X2J1 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-202 [Transcript ID] ENST00000614888 [bp] 1950 [Protein] 650aa [Translation ID] ENSP00000484605 [CCDS] - [UniProt] A0A087X207 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json
bada8508__Gene__BCAS3__ENSG00000141376___Biotype
[Name] BCAS3-023 [Transcript ID] ENST00000586484 [bp] 747 [Protein] 184aa [Translation ID] ENSP00000466552 [CCDS] - [UniProt] K7EML5 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: BCAS3 (ENSG00000141376)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000141376;r=17:60677453-61392838
19/1438042985140.15_20150728002305-00289-ip-10-236-191-2_426558336_0.json