ama-autism / app.py
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import streamlit as st
from transformers import RagTokenizer, RagRetriever, RagSequenceForGeneration
from sentence_transformers import SentenceTransformer
import faiss
import numpy as np
import arxiv
# Title
st.title("arXiv RAG with Streamlit")
# Input: Query
query = st.text_input("Enter your query:")
# Fetch arXiv papers
def fetch_arxiv_papers(query, max_results=5):
client = arxiv.Client()
search = arxiv.Search(
query=query,
max_results=max_results,
sort_by=arxiv.SortCriterion.SubmittedDate
)
results = list(client.results(search))
papers = [{"title": result.title, "summary": result.summary, "pdf_url": result.pdf_url} for result in results]
return papers
# RAG Pipeline
def rag_pipeline(query, papers):
# Load pre-trained RAG model
tokenizer = RagTokenizer.from_pretrained("facebook/rag-sequence-nq")
retriever = RagRetriever.from_pretrained("facebook/rag-sequence-nq", index_name="custom")
model = RagSequenceForGeneration.from_pretrained("facebook/rag-sequence-nq", retriever=retriever)
# Encode papers into embeddings
embedder = SentenceTransformer('all-MiniLM-L6-v2')
paper_embeddings = embedder.encode([paper["summary"] for paper in papers])
# Build FAISS index
index = faiss.IndexFlatL2(paper_embeddings.shape[1])
index.add(paper_embeddings)
# Retrieve relevant papers
query_embedding = embedder.encode([query])
distances, indices = index.search(query_embedding, k=2) # Top 2 relevant papers
relevant_papers = [papers[i] for i in indices[0]]
# Generate answer using RAG
inputs = tokenizer(query, return_tensors="pt")
generated_ids = model.generate(inputs["input_ids"])
answer = tokenizer.batch_decode(generated_ids, skip_special_tokens=True)[0]
return answer, relevant_papers
# Run the app
if query:
st.write("Fetching arXiv papers...")
papers = fetch_arxiv_papers(query)
st.write(f"Found {len(papers)} papers.")
st.write("Running RAG pipeline...")
answer, relevant_papers = rag_pipeline(query, papers)
st.write("### Answer:")
st.write(answer)
st.write("### Relevant Papers:")
for paper in relevant_papers:
st.write(f"**Title:** {paper['title']}")
st.write(f"**Summary:** {paper['summary']}")
st.write(f"**PDF URL:** {paper['pdf_url']}")
st.write("---")