emmas96 commited on
Commit
483853f
·
1 Parent(s): 2d2e3fe

repeat dummy smiles in retrieval

Browse files
Files changed (1) hide show
  1. app.py +2 -7
app.py CHANGED
@@ -193,17 +193,12 @@ def retrieval():
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  )
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  st.write(f'The top-{selected_k} most active drug coupounds from {selected_dataset} predicted by HyperPCM are: ')
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- dummy_smiles = [['CC(=O)OC1=CC=CC=C1C(=O)O', 'COc1cc(C=O)ccc1O', 'CC(=O)Nc1ccc(O)cc1', 'CC(=O)Nc1ccc(OS(=O)(=O)O)cc1',
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- 'CC(=O)Nc1ccc(O[C@@H]2O[C@H](C(=O)O)[C@@H](O)[C@H](O)[C@H]2O)cc1'], ['CC(=O)OC1=CC=CC=C1C(=O)O', 'COc1cc(C=O)ccc1O', 'CC(=O)Nc1ccc(O)cc1',
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- 'CC(=O)Nc1ccc(OS(=O)(=O)O)cc1', 'CC(=O)Nc1ccc(O[C@@H]2O[C@H](C(=O)O)[C@@H](O)[C@H](O)[C@H]2O)cc1'], ['CC(=O)OC1=CC=CC=C1C(=O)O',
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- 'COc1cc(C=O)ccc1O', 'CC(=O)Nc1ccc(O)cc1', 'CC(=O)Nc1ccc(OS(=O)(=O)O)cc1', 'CC(=O)Nc1ccc(O[C@@H]2O[C@H](C(=O)O)[C@@H](O)[C@H](O)[C@H]2O)cc1'],
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- ['CC(=O)OC1=CC=CC=C1C(=O)O', 'COc1cc(C=O)ccc1O', 'CC(=O)Nc1ccc(O)cc1', 'CC(=O)Nc1ccc(OS(=O)(=O)O)cc1',
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- 'CC(=O)Nc1ccc(O[C@@H]2O[C@H](C(=O)O)[C@@H](O)[C@H](O)[C@H]2O)cc1']]
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  cols = st.columns(5)
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  for j, col in enumerate(cols):
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  with col:
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  for i in range(int(selected_k/5)):
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- mol = Chem.MolFromSmiles(dummy_smiles[i,j])
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  mol_img = Chem.Draw.MolToImage(mol)
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  st.image(mol_img)
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  )
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  st.write(f'The top-{selected_k} most active drug coupounds from {selected_dataset} predicted by HyperPCM are: ')
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+ dummy_smiles = ['CC(=O)OC1=CC=CC=C1C(=O)O', 'COc1cc(C=O)ccc1O', 'CC(=O)Nc1ccc(O)cc1', 'CC(=O)Nc1ccc(OS(=O)(=O)O)cc1', 'CC(=O)Nc1ccc(O[C@@H]2O[C@H](C(=O)O)[C@@H](O)[C@H](O)[C@H]2O)cc1']
 
 
 
 
 
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  cols = st.columns(5)
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  for j, col in enumerate(cols):
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  with col:
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  for i in range(int(selected_k/5)):
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+ mol = Chem.MolFromSmiles(dummy_smiles[j])
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  mol_img = Chem.Draw.MolToImage(mol)
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  st.image(mol_img)
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