Hack90 commited on
Commit
c56cd2a
·
verified ·
1 Parent(s): fbce09f

Update app.py

Browse files
Files changed (1) hide show
  1. app.py +4 -4
app.py CHANGED
@@ -869,7 +869,7 @@ with ui.navset_card_tab(id="tab"):
869
  import matplotlib as mpl
870
  @output(suspend_when_hidden=True)
871
  @render.plot(output_id="plot_macro_output")
872
- def plot():
873
  #ds = load_dataset('Hack90/virus_tiny')
874
  df = pd.read_parquet('virus_ds.parquet')
875
  df = df[df['Organism_Name'].isin(input.virus_selector())]
@@ -893,7 +893,7 @@ with ui.navset_card_tab(id="tab"):
893
  filtered_df = df.groupby('Organism_Name').apply(filter_and_select).reset_index(drop=True)
894
  fig = plot_persistence_homology(filtered_df['Sequence'], filtered_df['Organism_Name'])
895
  return fig
896
- ui.output_plot("plot_macro_output")
897
  # with ui.nav_panel("Viral Model"):
898
  # gr.load("models/Hack90/virus_pythia_31_1024").launch()
899
 
@@ -915,7 +915,7 @@ with ui.navset_card_tab(id="tab"):
915
  import matplotlib as mpl
916
  @output(suspend_when_hidden=True)
917
  @render.plot(output_id="plot_micro_output")
918
- def plot():
919
  df = pd.read_csv('kmers.csv')
920
  k = input.kmer()
921
  top_k = input.top_k()
@@ -940,7 +940,7 @@ with ui.navset_card_tab(id="tab"):
940
  ax.set_ylabel("Percentage")
941
  ax.set_xticklabels(df['kmer'], rotation=90)
942
  return fig
943
- ui.output_plot("plot_micro_output")
944
  # with ui.nav_panel("Viral Model Training"):
945
  # ui.page_opts(fillable=True)
946
  # ui.panel_title("Does context size matter for a nucleotide model?")
 
869
  import matplotlib as mpl
870
  @output(suspend_when_hidden=True)
871
  @render.plot(output_id="plot_macro_output")
872
+ def plot_macro():
873
  #ds = load_dataset('Hack90/virus_tiny')
874
  df = pd.read_parquet('virus_ds.parquet')
875
  df = df[df['Organism_Name'].isin(input.virus_selector())]
 
893
  filtered_df = df.groupby('Organism_Name').apply(filter_and_select).reset_index(drop=True)
894
  fig = plot_persistence_homology(filtered_df['Sequence'], filtered_df['Organism_Name'])
895
  return fig
896
+ # ui.output_plot("plot_macro_output")
897
  # with ui.nav_panel("Viral Model"):
898
  # gr.load("models/Hack90/virus_pythia_31_1024").launch()
899
 
 
915
  import matplotlib as mpl
916
  @output(suspend_when_hidden=True)
917
  @render.plot(output_id="plot_micro_output")
918
+ def plot_micro():
919
  df = pd.read_csv('kmers.csv')
920
  k = input.kmer()
921
  top_k = input.top_k()
 
940
  ax.set_ylabel("Percentage")
941
  ax.set_xticklabels(df['kmer'], rotation=90)
942
  return fig
943
+ #ui.output_plot("plot_micro_output")
944
  # with ui.nav_panel("Viral Model Training"):
945
  # ui.page_opts(fillable=True)
946
  # ui.panel_title("Does context size matter for a nucleotide model?")