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HadoopGenomics/Hadoop-BAM | src/test/java/org/seqdoop/hadoop_bam/TestSAMHeaderReader.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
| import htsjdk.samtools.*;
import htsjdk.samtools.cram.CRAMException;
import org.apache.hadoop.conf.Configuration;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader;
import java.io.InputStream;
import java.net.URI;
import static org.junit.Assert.assertEquals; | package org.seqdoop.hadoop_bam;
public class TestSAMHeaderReader {
@Rule
public ExpectedException thrown= ExpectedException.none();
@Test
public void testBAMHeaderReaderNoReference() throws Exception {
final Configuration conf = new Configuration();
InputStream inputStream = ClassLoader.getSystemClassLoader().getResourceAsStream("test.bam");
final SamReader samReader = SamReaderFactory.makeDefault().open(SamInputResource.of(inputStream));
int sequenceCount = samReader.getFileHeader().getSequenceDictionary().size();
samReader.close();
inputStream = ClassLoader.getSystemClassLoader().getResourceAsStream("test.bam"); | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
// Path: src/test/java/org/seqdoop/hadoop_bam/TestSAMHeaderReader.java
import htsjdk.samtools.*;
import htsjdk.samtools.cram.CRAMException;
import org.apache.hadoop.conf.Configuration;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader;
import java.io.InputStream;
import java.net.URI;
import static org.junit.Assert.assertEquals;
package org.seqdoop.hadoop_bam;
public class TestSAMHeaderReader {
@Rule
public ExpectedException thrown= ExpectedException.none();
@Test
public void testBAMHeaderReaderNoReference() throws Exception {
final Configuration conf = new Configuration();
InputStream inputStream = ClassLoader.getSystemClassLoader().getResourceAsStream("test.bam");
final SamReader samReader = SamReaderFactory.makeDefault().open(SamInputResource.of(inputStream));
int sequenceCount = samReader.getFileHeader().getSequenceDictionary().size();
samReader.close();
inputStream = ClassLoader.getSystemClassLoader().getResourceAsStream("test.bam"); | SAMFileHeader samHeader = SAMHeaderReader.readSAMHeaderFrom(inputStream, conf); |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/util/IntervalUtil.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatException.java
// public class FormatException extends RuntimeException
// {
// private static final long serialVersionUID = 1L;
// public FormatException(String msg)
// {
// super(msg);
// }
// }
| import com.google.common.collect.ImmutableList;
import htsjdk.samtools.util.Interval;
import org.apache.hadoop.conf.Configuration;
import org.seqdoop.hadoop_bam.FormatException;
import java.util.ArrayList;
import java.util.List;
import java.util.function.Supplier; | package org.seqdoop.hadoop_bam.util;
/**
* Common utilities across different file formats.
*/
public final class IntervalUtil {
// declared to prevent instantiation.
private IntervalUtil() {}
/**
* Returns the list of intervals found in a string configuration property separated by colons.
* @param conf the source configuration.
* @param intervalPropertyName the property name holding the intervals.
* @return {@code null} if there is no such a property in the configuration.
* @throws NullPointerException if either input is null.
*/
public static List<Interval> getIntervals(final Configuration conf, final String intervalPropertyName) {
final String intervalsProperty = conf.get(intervalPropertyName);
if (intervalsProperty == null) {
return null;
}
if (intervalsProperty.isEmpty()) {
return ImmutableList.of();
}
final List<Interval> intervals = new ArrayList<>();
for (final String s : intervalsProperty.split(",")) {
final int lastColonIdx = s.lastIndexOf(':');
if (lastColonIdx < 0) { | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatException.java
// public class FormatException extends RuntimeException
// {
// private static final long serialVersionUID = 1L;
// public FormatException(String msg)
// {
// super(msg);
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/util/IntervalUtil.java
import com.google.common.collect.ImmutableList;
import htsjdk.samtools.util.Interval;
import org.apache.hadoop.conf.Configuration;
import org.seqdoop.hadoop_bam.FormatException;
import java.util.ArrayList;
import java.util.List;
import java.util.function.Supplier;
package org.seqdoop.hadoop_bam.util;
/**
* Common utilities across different file formats.
*/
public final class IntervalUtil {
// declared to prevent instantiation.
private IntervalUtil() {}
/**
* Returns the list of intervals found in a string configuration property separated by colons.
* @param conf the source configuration.
* @param intervalPropertyName the property name holding the intervals.
* @return {@code null} if there is no such a property in the configuration.
* @throws NullPointerException if either input is null.
*/
public static List<Interval> getIntervals(final Configuration conf, final String intervalPropertyName) {
final String intervalsProperty = conf.get(intervalPropertyName);
if (intervalsProperty == null) {
return null;
}
if (intervalsProperty.isEmpty()) {
return ImmutableList.of();
}
final List<Interval> intervals = new ArrayList<>();
for (final String s : intervalsProperty.split(",")) {
final int lastColonIdx = s.lastIndexOf(':');
if (lastColonIdx < 0) { | throw new FormatException("no colon found in interval string: " + s); |
HadoopGenomics/Hadoop-BAM | src/test/java/org/seqdoop/hadoop_bam/TestSequencedFragment.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public class FormatConstants
// {
// /**
// * Offset by which Sanger-style ASCII-encoded quality scores are shifted.
// */
// public static final int SANGER_OFFSET = 33;
//
// /**
// * Maximum encodable quality score for Sanger Phred+33 encoded base qualities.
// *
// * Range of legal values is [0,93], according to wikipedia on 10/9/2013:
// * http://en.wikipedia.org/wiki/FASTQ_format#Quality
// */
// public static final int SANGER_MAX = 93;
//
// /**
// * Offset by which Illumina-style ASCII-encoded quality scores are shifted.
// */
// public static final int ILLUMINA_OFFSET = 64;
//
// /**
// * Maximum encodable quality score for Illumina Phred+64 encoded base qualities.
// */
// public static final int ILLUMINA_MAX = 62;
//
// /**
// * Encodings for base quality formats.
// */
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// private FormatConstants() {} // no instantiation
//
// public static final String CONF_INPUT_BASE_QUALITY_ENCODING = "hbam.input.base-quality-encoding";
// public static final String CONF_INPUT_FILTER_FAILED_QC = "hbam.input.filter-failed-qc";
// }
//
// Path: src/main/java/org/seqdoop/hadoop_bam/FormatException.java
// public class FormatException extends RuntimeException
// {
// private static final long serialVersionUID = 1L;
// public FormatException(String msg)
// {
// super(msg);
// }
// }
| import java.io.DataInput;
import java.io.ByteArrayInputStream;
import java.io.DataInputStream;
import java.io.DataOutput;
import java.io.ByteArrayOutputStream;
import java.io.DataOutputStream;
import org.apache.hadoop.io.Text;
import org.junit.*;
import static org.junit.Assert.*;
import org.seqdoop.hadoop_bam.SequencedFragment;
import org.seqdoop.hadoop_bam.FormatConstants;
import org.seqdoop.hadoop_bam.FormatException;
import java.io.IOException; |
assertEquals(frag, cloneBySerialization(frag));
}
@Test
public void testToString()
{
String seq = "AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT";
String qual = "##############################";
frag.setSequence(new Text(seq));
frag.setQuality(new Text(qual));
frag.setInstrument("machine");
frag.setRunNumber(123);
frag.setFlowcellId("flowcell");
frag.setLane(3);
frag.setTile(1001);
frag.setXpos(1234);
frag.setYpos(4321);
frag.setIndexSequence("CAT");
frag.setRead(1);
assertEquals("machine\t123\tflowcell\t3\t1001\t1234\t4321\tCAT\t1\t" + seq + "\t" + qual + "\t1", frag.toString());
}
@Test
public void testVerifyQualitySangerOk()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("##############################")); | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public class FormatConstants
// {
// /**
// * Offset by which Sanger-style ASCII-encoded quality scores are shifted.
// */
// public static final int SANGER_OFFSET = 33;
//
// /**
// * Maximum encodable quality score for Sanger Phred+33 encoded base qualities.
// *
// * Range of legal values is [0,93], according to wikipedia on 10/9/2013:
// * http://en.wikipedia.org/wiki/FASTQ_format#Quality
// */
// public static final int SANGER_MAX = 93;
//
// /**
// * Offset by which Illumina-style ASCII-encoded quality scores are shifted.
// */
// public static final int ILLUMINA_OFFSET = 64;
//
// /**
// * Maximum encodable quality score for Illumina Phred+64 encoded base qualities.
// */
// public static final int ILLUMINA_MAX = 62;
//
// /**
// * Encodings for base quality formats.
// */
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// private FormatConstants() {} // no instantiation
//
// public static final String CONF_INPUT_BASE_QUALITY_ENCODING = "hbam.input.base-quality-encoding";
// public static final String CONF_INPUT_FILTER_FAILED_QC = "hbam.input.filter-failed-qc";
// }
//
// Path: src/main/java/org/seqdoop/hadoop_bam/FormatException.java
// public class FormatException extends RuntimeException
// {
// private static final long serialVersionUID = 1L;
// public FormatException(String msg)
// {
// super(msg);
// }
// }
// Path: src/test/java/org/seqdoop/hadoop_bam/TestSequencedFragment.java
import java.io.DataInput;
import java.io.ByteArrayInputStream;
import java.io.DataInputStream;
import java.io.DataOutput;
import java.io.ByteArrayOutputStream;
import java.io.DataOutputStream;
import org.apache.hadoop.io.Text;
import org.junit.*;
import static org.junit.Assert.*;
import org.seqdoop.hadoop_bam.SequencedFragment;
import org.seqdoop.hadoop_bam.FormatConstants;
import org.seqdoop.hadoop_bam.FormatException;
import java.io.IOException;
assertEquals(frag, cloneBySerialization(frag));
}
@Test
public void testToString()
{
String seq = "AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT";
String qual = "##############################";
frag.setSequence(new Text(seq));
frag.setQuality(new Text(qual));
frag.setInstrument("machine");
frag.setRunNumber(123);
frag.setFlowcellId("flowcell");
frag.setLane(3);
frag.setTile(1001);
frag.setXpos(1234);
frag.setYpos(4321);
frag.setIndexSequence("CAT");
frag.setRead(1);
assertEquals("machine\t123\tflowcell\t3\t1001\t1234\t4321\tCAT\t1\t" + seq + "\t" + qual + "\t1", frag.toString());
}
@Test
public void testVerifyQualitySangerOk()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("##############################")); | assertEquals(-1, SequencedFragment.verifyQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Sanger)); |
HadoopGenomics/Hadoop-BAM | src/test/java/org/seqdoop/hadoop_bam/TestSequencedFragment.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public class FormatConstants
// {
// /**
// * Offset by which Sanger-style ASCII-encoded quality scores are shifted.
// */
// public static final int SANGER_OFFSET = 33;
//
// /**
// * Maximum encodable quality score for Sanger Phred+33 encoded base qualities.
// *
// * Range of legal values is [0,93], according to wikipedia on 10/9/2013:
// * http://en.wikipedia.org/wiki/FASTQ_format#Quality
// */
// public static final int SANGER_MAX = 93;
//
// /**
// * Offset by which Illumina-style ASCII-encoded quality scores are shifted.
// */
// public static final int ILLUMINA_OFFSET = 64;
//
// /**
// * Maximum encodable quality score for Illumina Phred+64 encoded base qualities.
// */
// public static final int ILLUMINA_MAX = 62;
//
// /**
// * Encodings for base quality formats.
// */
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// private FormatConstants() {} // no instantiation
//
// public static final String CONF_INPUT_BASE_QUALITY_ENCODING = "hbam.input.base-quality-encoding";
// public static final String CONF_INPUT_FILTER_FAILED_QC = "hbam.input.filter-failed-qc";
// }
//
// Path: src/main/java/org/seqdoop/hadoop_bam/FormatException.java
// public class FormatException extends RuntimeException
// {
// private static final long serialVersionUID = 1L;
// public FormatException(String msg)
// {
// super(msg);
// }
// }
| import java.io.DataInput;
import java.io.ByteArrayInputStream;
import java.io.DataInputStream;
import java.io.DataOutput;
import java.io.ByteArrayOutputStream;
import java.io.DataOutputStream;
import org.apache.hadoop.io.Text;
import org.junit.*;
import static org.junit.Assert.*;
import org.seqdoop.hadoop_bam.SequencedFragment;
import org.seqdoop.hadoop_bam.FormatConstants;
import org.seqdoop.hadoop_bam.FormatException;
import java.io.IOException; | frag.setQuality(new Text("zzz=zzzzzzzzzzzzzzzzzzzzzzzzzz"));
assertEquals(3, SequencedFragment.verifyQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Illumina));
}
@Test
public void testConvertQualityIlluminaToSanger()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("zzzzzzzzzzzzzzzzzzzzzzzzzzzzzz"));
SequencedFragment.convertQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Illumina, FormatConstants.BaseQualityEncoding.Sanger);
assertEquals("[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[", frag.getQuality().toString());
}
@Test
public void testConvertQualitySangerToIllumina()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("[[[[[[[[[[[[[[[[[[[[[[[[[[[[[["));
SequencedFragment.convertQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Sanger, FormatConstants.BaseQualityEncoding.Illumina);
assertEquals("zzzzzzzzzzzzzzzzzzzzzzzzzzzzzz", frag.getQuality().toString());
}
@Test(expected=IllegalArgumentException.class)
public void testConvertQualityNoop()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("[[[[[[[[[[[[[[[[[[[[[[[[[[[[[["));
SequencedFragment.convertQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Sanger, FormatConstants.BaseQualityEncoding.Sanger);
}
| // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public class FormatConstants
// {
// /**
// * Offset by which Sanger-style ASCII-encoded quality scores are shifted.
// */
// public static final int SANGER_OFFSET = 33;
//
// /**
// * Maximum encodable quality score for Sanger Phred+33 encoded base qualities.
// *
// * Range of legal values is [0,93], according to wikipedia on 10/9/2013:
// * http://en.wikipedia.org/wiki/FASTQ_format#Quality
// */
// public static final int SANGER_MAX = 93;
//
// /**
// * Offset by which Illumina-style ASCII-encoded quality scores are shifted.
// */
// public static final int ILLUMINA_OFFSET = 64;
//
// /**
// * Maximum encodable quality score for Illumina Phred+64 encoded base qualities.
// */
// public static final int ILLUMINA_MAX = 62;
//
// /**
// * Encodings for base quality formats.
// */
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// private FormatConstants() {} // no instantiation
//
// public static final String CONF_INPUT_BASE_QUALITY_ENCODING = "hbam.input.base-quality-encoding";
// public static final String CONF_INPUT_FILTER_FAILED_QC = "hbam.input.filter-failed-qc";
// }
//
// Path: src/main/java/org/seqdoop/hadoop_bam/FormatException.java
// public class FormatException extends RuntimeException
// {
// private static final long serialVersionUID = 1L;
// public FormatException(String msg)
// {
// super(msg);
// }
// }
// Path: src/test/java/org/seqdoop/hadoop_bam/TestSequencedFragment.java
import java.io.DataInput;
import java.io.ByteArrayInputStream;
import java.io.DataInputStream;
import java.io.DataOutput;
import java.io.ByteArrayOutputStream;
import java.io.DataOutputStream;
import org.apache.hadoop.io.Text;
import org.junit.*;
import static org.junit.Assert.*;
import org.seqdoop.hadoop_bam.SequencedFragment;
import org.seqdoop.hadoop_bam.FormatConstants;
import org.seqdoop.hadoop_bam.FormatException;
import java.io.IOException;
frag.setQuality(new Text("zzz=zzzzzzzzzzzzzzzzzzzzzzzzzz"));
assertEquals(3, SequencedFragment.verifyQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Illumina));
}
@Test
public void testConvertQualityIlluminaToSanger()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("zzzzzzzzzzzzzzzzzzzzzzzzzzzzzz"));
SequencedFragment.convertQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Illumina, FormatConstants.BaseQualityEncoding.Sanger);
assertEquals("[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[", frag.getQuality().toString());
}
@Test
public void testConvertQualitySangerToIllumina()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("[[[[[[[[[[[[[[[[[[[[[[[[[[[[[["));
SequencedFragment.convertQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Sanger, FormatConstants.BaseQualityEncoding.Illumina);
assertEquals("zzzzzzzzzzzzzzzzzzzzzzzzzzzzzz", frag.getQuality().toString());
}
@Test(expected=IllegalArgumentException.class)
public void testConvertQualityNoop()
{
frag.setSequence(new Text("AGTAGTAGTAGTAGTAGTAGTAGTAGTAGT"));
frag.setQuality(new Text("[[[[[[[[[[[[[[[[[[[[[[[[[[[[[["));
SequencedFragment.convertQuality(frag.getQuality(), FormatConstants.BaseQualityEncoding.Sanger, FormatConstants.BaseQualityEncoding.Sanger);
}
| @Test(expected=FormatException.class) |
HadoopGenomics/Hadoop-BAM | src/test/java/org/seqdoop/hadoop_bam/TestConfHelper.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
| import org.seqdoop.hadoop_bam.util.ConfHelper;
import org.junit.*;
import static org.junit.Assert.*;
import org.apache.hadoop.conf.Configuration; | // Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
public class TestConfHelper
{
@Test
public void testParseBooleanValidValues()
{ | // Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
// Path: src/test/java/org/seqdoop/hadoop_bam/TestConfHelper.java
import org.seqdoop.hadoop_bam.util.ConfHelper;
import org.junit.*;
import static org.junit.Assert.*;
import org.apache.hadoop.conf.Configuration;
// Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
public class TestConfHelper
{
@Test
public void testParseBooleanValidValues()
{ | assertTrue(ConfHelper.parseBoolean("true", false)); |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/BCFRecordWriter.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/WrapSeekable.java
// public class WrapSeekable<S extends InputStream & Seekable>
// extends SeekableStream
// {
// private final S stm;
// private final long len;
// private final Path path;
//
// public WrapSeekable(final S s, long length, Path p) {
// stm = s;
// len = length;
// path = p;
// }
//
// /** A helper for the common use case. */
// public static WrapSeekable<FSDataInputStream> openPath(
// FileSystem fs, Path p) throws IOException
// {
// return new WrapSeekable<FSDataInputStream>(
// fs.open(p), fs.getFileStatus(p).getLen(), p);
// }
// public static WrapSeekable<FSDataInputStream> openPath(
// Configuration conf, Path path) throws IOException
// {
// return openPath(path.getFileSystem(conf), path);
// }
//
// @Override public String getSource() { return path.toString(); }
// @Override public long length () { return len; }
//
// @Override public long position() throws IOException { return stm.getPos(); }
// @Override public void close() throws IOException { stm.close(); }
// @Override public boolean eof () throws IOException {
// return stm.getPos() == length();
// }
// @Override public void seek(long pos) throws IOException {
// stm.seek(pos);
// }
// @Override public int read() throws IOException {
// return stm.read();
// }
// @Override public int read(byte[] buf, int offset, int len)
// throws IOException
// {
// return stm.read(buf, offset, len);
// }
// }
| import org.apache.hadoop.fs.Path;
import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import htsjdk.variant.variantcontext.GenotypesContext;
import htsjdk.variant.variantcontext.VariantContext;
import htsjdk.variant.variantcontext.writer.Options;
import htsjdk.variant.variantcontext.writer.VariantContextWriter;
import htsjdk.variant.variantcontext.writer.VariantContextWriterBuilder;
import htsjdk.variant.vcf.VCFHeader;
import org.seqdoop.hadoop_bam.util.VCFHeaderReader;
import org.seqdoop.hadoop_bam.util.WrapSeekable;
import java.io.File;
import java.io.FilterOutputStream;
import java.io.IOException;
import java.io.OutputStream;
import htsjdk.samtools.util.BlockCompressedOutputStream;
import org.apache.hadoop.conf.Configuration; | // Copyright (c) 2013 Aalto University
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
// File created: 2013-06-28 15:58:08
package org.seqdoop.hadoop_bam;
/** A base {@link RecordWriter} for compressed BCF.
*
* <p>Handles the output stream, writing the header if requested, and provides
* the {@link #writeRecord} function for subclasses.</p>
*/
public abstract class BCFRecordWriter<K>
extends RecordWriter<K,VariantContextWritable>
{
private VariantContextWriter writer;
private LazyVCFGenotypesContext.HeaderDataCache vcfHeaderDataCache =
new LazyVCFGenotypesContext.HeaderDataCache();
private LazyBCFGenotypesContext.HeaderDataCache bcfHeaderDataCache =
new LazyBCFGenotypesContext.HeaderDataCache();
/** A VCF header is read from the input Path, which should refer to a VCF or
* BCF file.
*/
public BCFRecordWriter(
Path output, Path input, boolean writeHeader, TaskAttemptContext ctx)
throws IOException
{ | // Path: src/main/java/org/seqdoop/hadoop_bam/util/WrapSeekable.java
// public class WrapSeekable<S extends InputStream & Seekable>
// extends SeekableStream
// {
// private final S stm;
// private final long len;
// private final Path path;
//
// public WrapSeekable(final S s, long length, Path p) {
// stm = s;
// len = length;
// path = p;
// }
//
// /** A helper for the common use case. */
// public static WrapSeekable<FSDataInputStream> openPath(
// FileSystem fs, Path p) throws IOException
// {
// return new WrapSeekable<FSDataInputStream>(
// fs.open(p), fs.getFileStatus(p).getLen(), p);
// }
// public static WrapSeekable<FSDataInputStream> openPath(
// Configuration conf, Path path) throws IOException
// {
// return openPath(path.getFileSystem(conf), path);
// }
//
// @Override public String getSource() { return path.toString(); }
// @Override public long length () { return len; }
//
// @Override public long position() throws IOException { return stm.getPos(); }
// @Override public void close() throws IOException { stm.close(); }
// @Override public boolean eof () throws IOException {
// return stm.getPos() == length();
// }
// @Override public void seek(long pos) throws IOException {
// stm.seek(pos);
// }
// @Override public int read() throws IOException {
// return stm.read();
// }
// @Override public int read(byte[] buf, int offset, int len)
// throws IOException
// {
// return stm.read(buf, offset, len);
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/BCFRecordWriter.java
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import htsjdk.variant.variantcontext.GenotypesContext;
import htsjdk.variant.variantcontext.VariantContext;
import htsjdk.variant.variantcontext.writer.Options;
import htsjdk.variant.variantcontext.writer.VariantContextWriter;
import htsjdk.variant.variantcontext.writer.VariantContextWriterBuilder;
import htsjdk.variant.vcf.VCFHeader;
import org.seqdoop.hadoop_bam.util.VCFHeaderReader;
import org.seqdoop.hadoop_bam.util.WrapSeekable;
import java.io.File;
import java.io.FilterOutputStream;
import java.io.IOException;
import java.io.OutputStream;
import htsjdk.samtools.util.BlockCompressedOutputStream;
import org.apache.hadoop.conf.Configuration;
// Copyright (c) 2013 Aalto University
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
// File created: 2013-06-28 15:58:08
package org.seqdoop.hadoop_bam;
/** A base {@link RecordWriter} for compressed BCF.
*
* <p>Handles the output stream, writing the header if requested, and provides
* the {@link #writeRecord} function for subclasses.</p>
*/
public abstract class BCFRecordWriter<K>
extends RecordWriter<K,VariantContextWritable>
{
private VariantContextWriter writer;
private LazyVCFGenotypesContext.HeaderDataCache vcfHeaderDataCache =
new LazyVCFGenotypesContext.HeaderDataCache();
private LazyBCFGenotypesContext.HeaderDataCache bcfHeaderDataCache =
new LazyBCFGenotypesContext.HeaderDataCache();
/** A VCF header is read from the input Path, which should refer to a VCF or
* BCF file.
*/
public BCFRecordWriter(
Path output, Path input, boolean writeHeader, TaskAttemptContext ctx)
throws IOException
{ | final WrapSeekable in = |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/SAMRecordWriter.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
| import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader;
import java.io.IOException;
import java.io.OutputStream;
import htsjdk.samtools.SAMFileHeader;
import htsjdk.samtools.SAMRecord;
import htsjdk.samtools.SAMTextWriter;
import org.apache.hadoop.fs.Path; | // Copyright (c) 2010 Aalto University
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
// File created: 2012-02-23 12:42:49
package org.seqdoop.hadoop_bam;
/** A base {@link RecordWriter} for SAM records.
*
* <p>Handles the output stream, writing the header if requested, and provides
* the {@link #writeAlignment} function for subclasses.</p>
*/
public abstract class SAMRecordWriter<K>
extends RecordWriter<K,SAMRecordWritable>
{
private SAMTextWriter writer;
private SAMFileHeader header;
/** A SAMFileHeader is read from the input Path. */
public SAMRecordWriter(
Path output, Path input, boolean writeHeader, TaskAttemptContext ctx)
throws IOException
{
init(
output, | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/SAMRecordWriter.java
import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader;
import java.io.IOException;
import java.io.OutputStream;
import htsjdk.samtools.SAMFileHeader;
import htsjdk.samtools.SAMRecord;
import htsjdk.samtools.SAMTextWriter;
import org.apache.hadoop.fs.Path;
// Copyright (c) 2010 Aalto University
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
// File created: 2012-02-23 12:42:49
package org.seqdoop.hadoop_bam;
/** A base {@link RecordWriter} for SAM records.
*
* <p>Handles the output stream, writing the header if requested, and provides
* the {@link #writeAlignment} function for subclasses.</p>
*/
public abstract class SAMRecordWriter<K>
extends RecordWriter<K,SAMRecordWritable>
{
private SAMTextWriter writer;
private SAMFileHeader header;
/** A SAMFileHeader is read from the input Path. */
public SAMRecordWriter(
Path output, Path input, boolean writeHeader, TaskAttemptContext ctx)
throws IOException
{
init(
output, | SAMHeaderReader.readSAMHeaderFrom(input, ctx.getConfiguration()), |
HadoopGenomics/Hadoop-BAM | src/test/java/org/seqdoop/hadoop_bam/TestBAMSplitGuesser.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/WrapSeekable.java
// public class WrapSeekable<S extends InputStream & Seekable>
// extends SeekableStream
// {
// private final S stm;
// private final long len;
// private final Path path;
//
// public WrapSeekable(final S s, long length, Path p) {
// stm = s;
// len = length;
// path = p;
// }
//
// /** A helper for the common use case. */
// public static WrapSeekable<FSDataInputStream> openPath(
// FileSystem fs, Path p) throws IOException
// {
// return new WrapSeekable<FSDataInputStream>(
// fs.open(p), fs.getFileStatus(p).getLen(), p);
// }
// public static WrapSeekable<FSDataInputStream> openPath(
// Configuration conf, Path path) throws IOException
// {
// return openPath(path.getFileSystem(conf), path);
// }
//
// @Override public String getSource() { return path.toString(); }
// @Override public long length () { return len; }
//
// @Override public long position() throws IOException { return stm.getPos(); }
// @Override public void close() throws IOException { stm.close(); }
// @Override public boolean eof () throws IOException {
// return stm.getPos() == length();
// }
// @Override public void seek(long pos) throws IOException {
// stm.seek(pos);
// }
// @Override public int read() throws IOException {
// return stm.read();
// }
// @Override public int read(byte[] buf, int offset, int len)
// throws IOException
// {
// return stm.read(buf, offset, len);
// }
// }
| import htsjdk.samtools.SAMUtils;
import htsjdk.samtools.seekablestream.SeekableStream;
import java.io.File;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.junit.Test;
import org.seqdoop.hadoop_bam.util.WrapSeekable;
import static org.junit.Assert.assertEquals; | package org.seqdoop.hadoop_bam;
public class TestBAMSplitGuesser {
@Test
public void test() throws Exception {
Configuration conf = new Configuration();
String bam = getClass().getClassLoader().getResource("test.bam").getFile(); | // Path: src/main/java/org/seqdoop/hadoop_bam/util/WrapSeekable.java
// public class WrapSeekable<S extends InputStream & Seekable>
// extends SeekableStream
// {
// private final S stm;
// private final long len;
// private final Path path;
//
// public WrapSeekable(final S s, long length, Path p) {
// stm = s;
// len = length;
// path = p;
// }
//
// /** A helper for the common use case. */
// public static WrapSeekable<FSDataInputStream> openPath(
// FileSystem fs, Path p) throws IOException
// {
// return new WrapSeekable<FSDataInputStream>(
// fs.open(p), fs.getFileStatus(p).getLen(), p);
// }
// public static WrapSeekable<FSDataInputStream> openPath(
// Configuration conf, Path path) throws IOException
// {
// return openPath(path.getFileSystem(conf), path);
// }
//
// @Override public String getSource() { return path.toString(); }
// @Override public long length () { return len; }
//
// @Override public long position() throws IOException { return stm.getPos(); }
// @Override public void close() throws IOException { stm.close(); }
// @Override public boolean eof () throws IOException {
// return stm.getPos() == length();
// }
// @Override public void seek(long pos) throws IOException {
// stm.seek(pos);
// }
// @Override public int read() throws IOException {
// return stm.read();
// }
// @Override public int read(byte[] buf, int offset, int len)
// throws IOException
// {
// return stm.read(buf, offset, len);
// }
// }
// Path: src/test/java/org/seqdoop/hadoop_bam/TestBAMSplitGuesser.java
import htsjdk.samtools.SAMUtils;
import htsjdk.samtools.seekablestream.SeekableStream;
import java.io.File;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.junit.Test;
import org.seqdoop.hadoop_bam.util.WrapSeekable;
import static org.junit.Assert.assertEquals;
package org.seqdoop.hadoop_bam;
public class TestBAMSplitGuesser {
@Test
public void test() throws Exception {
Configuration conf = new Configuration();
String bam = getClass().getClassLoader().getResource("test.bam").getFile(); | SeekableStream ss = WrapSeekable.openPath(conf, new Path(bam)); |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringCRAMOutputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
| import java.io.IOException;
import java.io.InputStream;
import htsjdk.samtools.SAMFileHeader;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader; | package org.seqdoop.hadoop_bam;
/** Writes only the BAM records, not the key.
*
* <p>A {@link SAMFileHeader} must be provided via {@link #setSAMHeader} or
* {@link #readSAMHeaderFrom} before {@link #getRecordWriter} is called.</p>
*
* <p>By default, writes the SAM header to the output file(s). This
* can be disabled, because in distributed usage one often ends up with (and,
* for decent performance, wants to end up with) the output split into multiple
* parts, which are easier to concatenate if the header is not present in each
* file.</p>
*/
public class KeyIgnoringCRAMOutputFormat<K> extends CRAMOutputFormat<K> {
protected SAMFileHeader header;
private boolean writeHeader = true;
public KeyIgnoringCRAMOutputFormat() {}
/** Whether the header will be written or not. */
public boolean getWriteHeader() { return writeHeader; }
/** Set whether the header will be written or not. */
public void setWriteHeader(boolean b) { writeHeader = b; }
public SAMFileHeader getSAMHeader() { return header; }
public void setSAMHeader(SAMFileHeader header) { this.header = header; }
public void readSAMHeaderFrom(Path path, Configuration conf)
throws IOException
{ | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringCRAMOutputFormat.java
import java.io.IOException;
import java.io.InputStream;
import htsjdk.samtools.SAMFileHeader;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader;
package org.seqdoop.hadoop_bam;
/** Writes only the BAM records, not the key.
*
* <p>A {@link SAMFileHeader} must be provided via {@link #setSAMHeader} or
* {@link #readSAMHeaderFrom} before {@link #getRecordWriter} is called.</p>
*
* <p>By default, writes the SAM header to the output file(s). This
* can be disabled, because in distributed usage one often ends up with (and,
* for decent performance, wants to end up with) the output split into multiple
* parts, which are easier to concatenate if the header is not present in each
* file.</p>
*/
public class KeyIgnoringCRAMOutputFormat<K> extends CRAMOutputFormat<K> {
protected SAMFileHeader header;
private boolean writeHeader = true;
public KeyIgnoringCRAMOutputFormat() {}
/** Whether the header will be written or not. */
public boolean getWriteHeader() { return writeHeader; }
/** Set whether the header will be written or not. */
public void setWriteHeader(boolean b) { writeHeader = b; }
public SAMFileHeader getSAMHeader() { return header; }
public void setSAMHeader(SAMFileHeader header) { this.header = header; }
public void readSAMHeaderFrom(Path path, Configuration conf)
throws IOException
{ | this.header = SAMHeaderReader.readSAMHeaderFrom(path, conf); |
HadoopGenomics/Hadoop-BAM | src/test/java/org/seqdoop/hadoop_bam/TestVCFInputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/BGZFCodec.java
// public class BGZFCodec extends GzipCodec implements SplittableCompressionCodec {
//
// public static final String DEFAULT_EXTENSION = ".bgz";
//
// @Override
// public CompressionOutputStream createOutputStream(OutputStream out) throws IOException {
// return new BGZFCompressionOutputStream(out);
// }
//
// // compressors are not used, so ignore/return null
//
// @Override
// public CompressionOutputStream createOutputStream(OutputStream out,
// Compressor compressor) throws IOException {
// return createOutputStream(out); // compressors are not used, so ignore
// }
//
// @Override
// public Class<? extends Compressor> getCompressorType() {
// return null; // compressors are not used, so return null
// }
//
// @Override
// public Compressor createCompressor() {
// return null; // compressors are not used, so return null
// }
//
// @Override
// public SplitCompressionInputStream createInputStream(InputStream seekableIn,
// Decompressor decompressor, long start, long end, READ_MODE readMode) throws IOException {
// BGZFSplitGuesser splitGuesser = new BGZFSplitGuesser(seekableIn);
// long adjustedStart = splitGuesser.guessNextBGZFBlockStart(start, end);
// ((Seekable)seekableIn).seek(adjustedStart);
// return new BGZFSplitCompressionInputStream(seekableIn, adjustedStart, end);
// }
//
// // fall back to GzipCodec for input streams without a start position
//
// @Override
// public String getDefaultExtension() {
// return DEFAULT_EXTENSION;
// }
// }
| import com.google.common.collect.ImmutableList;
import com.google.common.collect.Iterators;
import htsjdk.samtools.util.Interval;
import htsjdk.variant.vcf.VCFFileReader;
import java.io.File;
import java.util.ArrayList;
import java.util.Iterator;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.mapreduce.*;
import htsjdk.variant.variantcontext.VariantContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.task.JobContextImpl;
import org.apache.hadoop.mapreduce.task.TaskAttemptContextImpl;
import org.junit.Before;
import org.junit.Test;
import org.junit.runner.RunWith;
import org.junit.runners.Parameterized;
import java.io.IOException;
import java.lang.reflect.InvocationTargetException;
import java.util.Arrays;
import java.util.Collection;
import java.util.List;
import org.seqdoop.hadoop_bam.util.BGZFCodec;
import org.seqdoop.hadoop_bam.util.BGZFEnhancedGzipCodec;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertTrue;
import static org.mockito.Mockito.mock; | this.interval = interval;
}
@Parameterized.Parameters
public static Collection<Object> data() {
return Arrays.asList(new Object[][] {
{"test.vcf", NUM_SPLITS.ANY, null},
{"test.vcf.gz", NUM_SPLITS.EXACTLY_ONE, null},
{"test.vcf.bgzf.gz", NUM_SPLITS.ANY, null},
// BCF tests currently fail due to https://github.com/samtools/htsjdk/issues/507
// {"test.uncompressed.bcf", NUM_SPLITS.ANY, null},
// {"test.bgzf.bcf", NUM_SPLITS.ANY, null},
{"HiSeq.10000.vcf", NUM_SPLITS.MORE_THAN_ONE, null},
{"HiSeq.10000.vcf.gz", NUM_SPLITS.EXACTLY_ONE, null},
{"HiSeq.10000.vcf.bgzf.gz", NUM_SPLITS.MORE_THAN_ONE, null},
{"HiSeq.10000.vcf.bgzf.gz", NUM_SPLITS.EXACTLY_ONE,
new Interval("chr1", 2700000, 2800000)}, // chosen to fall in one split
{"HiSeq.10000.vcf.bgz", NUM_SPLITS.MORE_THAN_ONE, null},
{"HiSeq.10000.vcf.bgz", NUM_SPLITS.EXACTLY_ONE,
new Interval("chr1", 2700000, 2800000)} // chosen to fall in one split
});
}
@Before
public void setup() throws IOException, NoSuchMethodException, IllegalAccessException, InvocationTargetException, InstantiationException, InterruptedException, NoSuchFieldException {
Configuration conf = new Configuration();
String input_file = ClassLoader.getSystemClassLoader().getResource(filename).getFile();
conf.set("hadoopbam.vcf.trust-exts", "true");
conf.set("mapred.input.dir", "file://" + input_file);
conf.setStrings("io.compression.codecs", BGZFEnhancedGzipCodec.class.getCanonicalName(), | // Path: src/main/java/org/seqdoop/hadoop_bam/util/BGZFCodec.java
// public class BGZFCodec extends GzipCodec implements SplittableCompressionCodec {
//
// public static final String DEFAULT_EXTENSION = ".bgz";
//
// @Override
// public CompressionOutputStream createOutputStream(OutputStream out) throws IOException {
// return new BGZFCompressionOutputStream(out);
// }
//
// // compressors are not used, so ignore/return null
//
// @Override
// public CompressionOutputStream createOutputStream(OutputStream out,
// Compressor compressor) throws IOException {
// return createOutputStream(out); // compressors are not used, so ignore
// }
//
// @Override
// public Class<? extends Compressor> getCompressorType() {
// return null; // compressors are not used, so return null
// }
//
// @Override
// public Compressor createCompressor() {
// return null; // compressors are not used, so return null
// }
//
// @Override
// public SplitCompressionInputStream createInputStream(InputStream seekableIn,
// Decompressor decompressor, long start, long end, READ_MODE readMode) throws IOException {
// BGZFSplitGuesser splitGuesser = new BGZFSplitGuesser(seekableIn);
// long adjustedStart = splitGuesser.guessNextBGZFBlockStart(start, end);
// ((Seekable)seekableIn).seek(adjustedStart);
// return new BGZFSplitCompressionInputStream(seekableIn, adjustedStart, end);
// }
//
// // fall back to GzipCodec for input streams without a start position
//
// @Override
// public String getDefaultExtension() {
// return DEFAULT_EXTENSION;
// }
// }
// Path: src/test/java/org/seqdoop/hadoop_bam/TestVCFInputFormat.java
import com.google.common.collect.ImmutableList;
import com.google.common.collect.Iterators;
import htsjdk.samtools.util.Interval;
import htsjdk.variant.vcf.VCFFileReader;
import java.io.File;
import java.util.ArrayList;
import java.util.Iterator;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.mapreduce.*;
import htsjdk.variant.variantcontext.VariantContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.task.JobContextImpl;
import org.apache.hadoop.mapreduce.task.TaskAttemptContextImpl;
import org.junit.Before;
import org.junit.Test;
import org.junit.runner.RunWith;
import org.junit.runners.Parameterized;
import java.io.IOException;
import java.lang.reflect.InvocationTargetException;
import java.util.Arrays;
import java.util.Collection;
import java.util.List;
import org.seqdoop.hadoop_bam.util.BGZFCodec;
import org.seqdoop.hadoop_bam.util.BGZFEnhancedGzipCodec;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertTrue;
import static org.mockito.Mockito.mock;
this.interval = interval;
}
@Parameterized.Parameters
public static Collection<Object> data() {
return Arrays.asList(new Object[][] {
{"test.vcf", NUM_SPLITS.ANY, null},
{"test.vcf.gz", NUM_SPLITS.EXACTLY_ONE, null},
{"test.vcf.bgzf.gz", NUM_SPLITS.ANY, null},
// BCF tests currently fail due to https://github.com/samtools/htsjdk/issues/507
// {"test.uncompressed.bcf", NUM_SPLITS.ANY, null},
// {"test.bgzf.bcf", NUM_SPLITS.ANY, null},
{"HiSeq.10000.vcf", NUM_SPLITS.MORE_THAN_ONE, null},
{"HiSeq.10000.vcf.gz", NUM_SPLITS.EXACTLY_ONE, null},
{"HiSeq.10000.vcf.bgzf.gz", NUM_SPLITS.MORE_THAN_ONE, null},
{"HiSeq.10000.vcf.bgzf.gz", NUM_SPLITS.EXACTLY_ONE,
new Interval("chr1", 2700000, 2800000)}, // chosen to fall in one split
{"HiSeq.10000.vcf.bgz", NUM_SPLITS.MORE_THAN_ONE, null},
{"HiSeq.10000.vcf.bgz", NUM_SPLITS.EXACTLY_ONE,
new Interval("chr1", 2700000, 2800000)} // chosen to fall in one split
});
}
@Before
public void setup() throws IOException, NoSuchMethodException, IllegalAccessException, InvocationTargetException, InstantiationException, InterruptedException, NoSuchFieldException {
Configuration conf = new Configuration();
String input_file = ClassLoader.getSystemClassLoader().getResource(filename).getFile();
conf.set("hadoopbam.vcf.trust-exts", "true");
conf.set("mapred.input.dir", "file://" + input_file);
conf.setStrings("io.compression.codecs", BGZFEnhancedGzipCodec.class.getCanonicalName(), | BGZFCodec.class.getCanonicalName()); |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/FastqInputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
| import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import java.io.InputStream;
import java.io.IOException;
import java.io.EOFException;
import java.util.regex.*;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.compress.*;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat; | // Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
public class FastqInputFormat extends FileInputFormat<Text,SequencedFragment>
{
public static final String CONF_BASE_QUALITY_ENCODING = "hbam.fastq-input.base-quality-encoding";
public static final String CONF_FILTER_FAILED_QC = "hbam.fastq-input.filter-failed-qc";
public static final String CONF_BASE_QUALITY_ENCODING_DEFAULT = "sanger";
public static class FastqRecordReader extends RecordReader<Text,SequencedFragment>
{
/*
* fastq format:
* <fastq> := <block>+
* <block> := @<seqname>\n<seq>\n+[<seqname>]\n<qual>\n
* <seqname> := [A-Za-z0-9_.:-]+
* <seq> := [A-Za-z\n\.~]+
* <qual> := [!-~\n]+
*
* LP: this format is broken, no? You can have multi-line sequence and quality strings,
* and the quality encoding includes '@' in its valid character range. So how should one
* distinguish between \n@ as a record delimiter and and \n@ as part of a multi-line
* quality string?
*
* For now I'm going to assume single-line sequences. This works for our sequencing
* application. We'll see if someone complains in other applications.
*/
// start: first valid data index
private long start;
// end: first index value beyond the slice, i.e. slice is in range [start,end)
private long end;
// pos: current position in file
private long pos;
// file: the file being read
private Path file;
private LineReader lineReader;
private InputStream inputStream;
private Text currentKey = new Text();
private SequencedFragment currentValue = new SequencedFragment();
/* If true, will scan the identifier for read data as specified in the Casava
* users' guide v1.8:
* @<instrument>:<run number>:<flowcell ID>:<lane>:<tile>:<x-pos>:<y-pos> <read>:<is filtered>:<control number>:<index sequence>
* After the first name that doesn't match lookForIlluminaIdentifier will be
* set to false and no further scanning will be done.
*/
private boolean lookForIlluminaIdentifier = true;
private static final Pattern ILLUMINA_PATTERN = Pattern.compile("([^:]+):(\\d+):([^:]*):(\\d+):(\\d+):(-?\\d+):(-?\\d+)\\s+([123]):([YN]):(\\d+):(.*)");
private Text buffer = new Text();
| // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/FastqInputFormat.java
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import java.io.InputStream;
import java.io.IOException;
import java.io.EOFException;
import java.util.regex.*;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.compress.*;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
// Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
public class FastqInputFormat extends FileInputFormat<Text,SequencedFragment>
{
public static final String CONF_BASE_QUALITY_ENCODING = "hbam.fastq-input.base-quality-encoding";
public static final String CONF_FILTER_FAILED_QC = "hbam.fastq-input.filter-failed-qc";
public static final String CONF_BASE_QUALITY_ENCODING_DEFAULT = "sanger";
public static class FastqRecordReader extends RecordReader<Text,SequencedFragment>
{
/*
* fastq format:
* <fastq> := <block>+
* <block> := @<seqname>\n<seq>\n+[<seqname>]\n<qual>\n
* <seqname> := [A-Za-z0-9_.:-]+
* <seq> := [A-Za-z\n\.~]+
* <qual> := [!-~\n]+
*
* LP: this format is broken, no? You can have multi-line sequence and quality strings,
* and the quality encoding includes '@' in its valid character range. So how should one
* distinguish between \n@ as a record delimiter and and \n@ as part of a multi-line
* quality string?
*
* For now I'm going to assume single-line sequences. This works for our sequencing
* application. We'll see if someone complains in other applications.
*/
// start: first valid data index
private long start;
// end: first index value beyond the slice, i.e. slice is in range [start,end)
private long end;
// pos: current position in file
private long pos;
// file: the file being read
private Path file;
private LineReader lineReader;
private InputStream inputStream;
private Text currentKey = new Text();
private SequencedFragment currentValue = new SequencedFragment();
/* If true, will scan the identifier for read data as specified in the Casava
* users' guide v1.8:
* @<instrument>:<run number>:<flowcell ID>:<lane>:<tile>:<x-pos>:<y-pos> <read>:<is filtered>:<control number>:<index sequence>
* After the first name that doesn't match lookForIlluminaIdentifier will be
* set to false and no further scanning will be done.
*/
private boolean lookForIlluminaIdentifier = true;
private static final Pattern ILLUMINA_PATTERN = Pattern.compile("([^:]+):(\\d+):([^:]*):(\\d+):(\\d+):(-?\\d+):(-?\\d+)\\s+([123]):([YN]):(\\d+):(.*)");
private Text buffer = new Text();
| private BaseQualityEncoding qualityEncoding; |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/FastqInputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
| import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import java.io.InputStream;
import java.io.IOException;
import java.io.EOFException;
import java.util.regex.*;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.compress.*;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat; | {
positionAtFirstRecord(fileIn);
inputStream = fileIn;
}
else
{ // compressed file
if (start != 0)
throw new RuntimeException("Start position for compressed file is not 0! (found " + start + ")");
inputStream = codec.createInputStream(fileIn);
end = Long.MAX_VALUE; // read until the end of the file
}
lineReader = new LineReader(inputStream);
}
protected void setConf(Configuration conf)
{
String encoding =
conf.get(FastqInputFormat.CONF_BASE_QUALITY_ENCODING,
conf.get(FormatConstants.CONF_INPUT_BASE_QUALITY_ENCODING,
FastqInputFormat.CONF_BASE_QUALITY_ENCODING_DEFAULT));
if ("illumina".equals(encoding))
qualityEncoding = BaseQualityEncoding.Illumina;
else if ("sanger".equals(encoding))
qualityEncoding = BaseQualityEncoding.Sanger;
else
throw new RuntimeException("Unknown input base quality encoding value " + encoding);
| // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/FastqInputFormat.java
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import java.io.InputStream;
import java.io.IOException;
import java.io.EOFException;
import java.util.regex.*;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.compress.*;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
{
positionAtFirstRecord(fileIn);
inputStream = fileIn;
}
else
{ // compressed file
if (start != 0)
throw new RuntimeException("Start position for compressed file is not 0! (found " + start + ")");
inputStream = codec.createInputStream(fileIn);
end = Long.MAX_VALUE; // read until the end of the file
}
lineReader = new LineReader(inputStream);
}
protected void setConf(Configuration conf)
{
String encoding =
conf.get(FastqInputFormat.CONF_BASE_QUALITY_ENCODING,
conf.get(FormatConstants.CONF_INPUT_BASE_QUALITY_ENCODING,
FastqInputFormat.CONF_BASE_QUALITY_ENCODING_DEFAULT));
if ("illumina".equals(encoding))
qualityEncoding = BaseQualityEncoding.Illumina;
else if ("sanger".equals(encoding))
qualityEncoding = BaseQualityEncoding.Sanger;
else
throw new RuntimeException("Unknown input base quality encoding value " + encoding);
| filterFailedQC = ConfHelper.parseBoolean( |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringAnySAMOutputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
| import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader;
import java.io.IOException;
import java.io.InputStream;
import htsjdk.samtools.SAMFileHeader;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.mapreduce.RecordWriter; | // Copyright (c) 2010 Aalto University
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
// File created: 2010-08-11 12:19:23
package org.seqdoop.hadoop_bam;
/** Writes only the SAM records, not the key.
*
* <p>A {@link SAMFileHeader} must be provided via {@link #setSAMHeader} or
* {@link #readSAMHeaderFrom} before {@link #getRecordWriter} is called.</p>
*
* <p>By default, writes the SAM header to the output file(s). This
* can be disabled, because in distributed usage one often ends up with (and,
* for decent performance, wants to end up with) the output split into multiple
* parts, which are easier to concatenate if the header is not present in each
* file.</p>
*/
public class KeyIgnoringAnySAMOutputFormat<K> extends AnySAMOutputFormat<K> {
protected SAMFileHeader header;
/** Whether the header will be written, defaults to true..
*/
public static final String WRITE_HEADER_PROPERTY =
"hadoopbam.anysam.write-header";
public KeyIgnoringAnySAMOutputFormat(SAMFormat fmt) {
super(fmt);
}
public KeyIgnoringAnySAMOutputFormat(Configuration conf) {
super(conf);
if (format == null)
throw new IllegalArgumentException(
"unknown SAM format: OUTPUT_SAM_FORMAT_PROPERTY not set");
}
public KeyIgnoringAnySAMOutputFormat(Configuration conf, Path path) {
super(conf);
if (format == null) {
format = SAMFormat.inferFromFilePath(path);
if (format == null)
throw new IllegalArgumentException("unknown SAM format: " + path);
}
}
public SAMFileHeader getSAMHeader() { return header; }
public void setSAMHeader(SAMFileHeader header) { this.header = header; }
public void readSAMHeaderFrom(Path path, Configuration conf)
throws IOException
{ | // Path: src/main/java/org/seqdoop/hadoop_bam/util/SAMHeaderReader.java
// public final class SAMHeaderReader {
// /** A String property corresponding to a ValidationStringency
// * value. If set, the given stringency is used when any part of the
// * Hadoop-BAM library reads SAM or BAM.
// */
// public static final String VALIDATION_STRINGENCY_PROPERTY =
// "hadoopbam.samheaderreader.validation-stringency";
//
// public static SAMFileHeader readSAMHeaderFrom(Path path, Configuration conf)
// throws IOException
// {
// InputStream i = path.getFileSystem(conf).open(path);
// final SAMFileHeader h = readSAMHeaderFrom(i, conf);
// i.close();
// return h;
// }
//
// /** Does not close the stream. */
// public static SAMFileHeader readSAMHeaderFrom(
// final InputStream in, final Configuration conf)
// {
// final ValidationStringency
// stringency = getValidationStringency(conf);
// SamReaderFactory readerFactory = SamReaderFactory.makeDefault()
// .setOption(SamReaderFactory.Option.EAGERLY_DECODE, false)
// .setUseAsyncIo(false);
// if (stringency != null) {
// readerFactory.validationStringency(stringency);
// }
//
// final ReferenceSource refSource = getReferenceSource(conf);
// if (null != refSource) {
// readerFactory.referenceSource(refSource);
// }
// return readerFactory.open(SamInputResource.of(in)).getFileHeader();
// }
//
// public static ValidationStringency getValidationStringency(
// final Configuration conf)
// {
// final String p = conf.get(VALIDATION_STRINGENCY_PROPERTY);
// return p == null ? null : ValidationStringency.valueOf(p);
// }
//
// public static ReferenceSource getReferenceSource(
// final Configuration conf)
// {
// //TODO: There isn't anything particularly CRAM-specific about reference source or validation
// // stringency other than that a reference source is required for CRAM files. We should move
// // the reference source and validation stringency property names and utility methods out of
// // CRAMInputFormat and SAMHeaderReader and combine them together into a single class for extracting
// // configuration params, but it would break backward compatibility with existing code that
// // is dependent on the CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY.
// final String refSourcePath = conf.get(CRAMInputFormat.REFERENCE_SOURCE_PATH_PROPERTY);
// return refSourcePath == null ? null : new ReferenceSource(NIOFileUtil.asPath(refSourcePath));
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/KeyIgnoringAnySAMOutputFormat.java
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.seqdoop.hadoop_bam.util.SAMHeaderReader;
import java.io.IOException;
import java.io.InputStream;
import htsjdk.samtools.SAMFileHeader;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.mapreduce.RecordWriter;
// Copyright (c) 2010 Aalto University
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
// File created: 2010-08-11 12:19:23
package org.seqdoop.hadoop_bam;
/** Writes only the SAM records, not the key.
*
* <p>A {@link SAMFileHeader} must be provided via {@link #setSAMHeader} or
* {@link #readSAMHeaderFrom} before {@link #getRecordWriter} is called.</p>
*
* <p>By default, writes the SAM header to the output file(s). This
* can be disabled, because in distributed usage one often ends up with (and,
* for decent performance, wants to end up with) the output split into multiple
* parts, which are easier to concatenate if the header is not present in each
* file.</p>
*/
public class KeyIgnoringAnySAMOutputFormat<K> extends AnySAMOutputFormat<K> {
protected SAMFileHeader header;
/** Whether the header will be written, defaults to true..
*/
public static final String WRITE_HEADER_PROPERTY =
"hadoopbam.anysam.write-header";
public KeyIgnoringAnySAMOutputFormat(SAMFormat fmt) {
super(fmt);
}
public KeyIgnoringAnySAMOutputFormat(Configuration conf) {
super(conf);
if (format == null)
throw new IllegalArgumentException(
"unknown SAM format: OUTPUT_SAM_FORMAT_PROPERTY not set");
}
public KeyIgnoringAnySAMOutputFormat(Configuration conf, Path path) {
super(conf);
if (format == null) {
format = SAMFormat.inferFromFilePath(path);
if (format == null)
throw new IllegalArgumentException("unknown SAM format: " + path);
}
}
public SAMFileHeader getSAMHeader() { return header; }
public void setSAMHeader(SAMFileHeader header) { this.header = header; }
public void readSAMHeaderFrom(Path path, Configuration conf)
throws IOException
{ | this.header = SAMHeaderReader.readSAMHeaderFrom(path, conf); |
HadoopGenomics/Hadoop-BAM | src/test/java/org/seqdoop/hadoop_bam/IntervalUtilTest.java | // Path: src/main/java/org/seqdoop/hadoop_bam/util/IntervalUtil.java
// public final class IntervalUtil {
//
// // declared to prevent instantiation.
// private IntervalUtil() {}
//
// /**
// * Returns the list of intervals found in a string configuration property separated by colons.
// * @param conf the source configuration.
// * @param intervalPropertyName the property name holding the intervals.
// * @return {@code null} if there is no such a property in the configuration.
// * @throws NullPointerException if either input is null.
// */
// public static List<Interval> getIntervals(final Configuration conf, final String intervalPropertyName) {
// final String intervalsProperty = conf.get(intervalPropertyName);
// if (intervalsProperty == null) {
// return null;
// }
// if (intervalsProperty.isEmpty()) {
// return ImmutableList.of();
// }
// final List<Interval> intervals = new ArrayList<>();
// for (final String s : intervalsProperty.split(",")) {
// final int lastColonIdx = s.lastIndexOf(':');
// if (lastColonIdx < 0) {
// throw new FormatException("no colon found in interval string: " + s);
// }
// final int hyphenIdx = s.indexOf('-', lastColonIdx + 1);
// if (hyphenIdx < 0) {
// throw new FormatException("no hyphen found after colon interval string: " + s);
// }
// final String sequence = s.substring(0, lastColonIdx);
// final int start = parseIntOrThrowFormatException(s.substring(lastColonIdx + 1, hyphenIdx),
// "invalid start position", s);
// final int stop = parseIntOrThrowFormatException(s.substring(hyphenIdx + 1),
// "invalid stop position", s);
// intervals.add(new Interval(sequence, start, stop));
// }
// return intervals;
// }
//
// private static int parseIntOrThrowFormatException(final String str, final String error, final String input) {
// try {
// return Integer.parseInt(str);
// } catch (final NumberFormatException ex) {
// throw new FormatException(error + " in interval '" + input + "': '" + str + "'");
// }
// }
// }
| import htsjdk.samtools.util.Interval;
import org.apache.hadoop.conf.Configuration;
import org.junit.Assert;
import org.junit.Test;
import org.seqdoop.hadoop_bam.util.IntervalUtil;
import java.util.List;
import java.util.stream.Collectors;
import java.util.stream.Stream; | package org.seqdoop.hadoop_bam;
/**
* Unit tests for {@link IntervalUtil}.
*/
public class IntervalUtilTest {
@Test
public void testInvalidIntervals() {
final String[] invalidIntervals = {
"chr1", // full sequence interval are not allowed.
"chr1:12", // single position omitting stop is not allowed.
"chr1,chr2:121-123", // , are not allowed anywhere
"chr20:1,100-3,400", // , " "
"MT:35+", // , until end of contig + is not allowed.
"MT:13-31-1112", // too many positions.
"MT:-2112", // forgot the start position!
" MT : 113 - 1245" // blanks are not allowed either.
};
for (final String interval : invalidIntervals) {
final Configuration conf = new Configuration();
conf.set("prop-name", interval);
try { | // Path: src/main/java/org/seqdoop/hadoop_bam/util/IntervalUtil.java
// public final class IntervalUtil {
//
// // declared to prevent instantiation.
// private IntervalUtil() {}
//
// /**
// * Returns the list of intervals found in a string configuration property separated by colons.
// * @param conf the source configuration.
// * @param intervalPropertyName the property name holding the intervals.
// * @return {@code null} if there is no such a property in the configuration.
// * @throws NullPointerException if either input is null.
// */
// public static List<Interval> getIntervals(final Configuration conf, final String intervalPropertyName) {
// final String intervalsProperty = conf.get(intervalPropertyName);
// if (intervalsProperty == null) {
// return null;
// }
// if (intervalsProperty.isEmpty()) {
// return ImmutableList.of();
// }
// final List<Interval> intervals = new ArrayList<>();
// for (final String s : intervalsProperty.split(",")) {
// final int lastColonIdx = s.lastIndexOf(':');
// if (lastColonIdx < 0) {
// throw new FormatException("no colon found in interval string: " + s);
// }
// final int hyphenIdx = s.indexOf('-', lastColonIdx + 1);
// if (hyphenIdx < 0) {
// throw new FormatException("no hyphen found after colon interval string: " + s);
// }
// final String sequence = s.substring(0, lastColonIdx);
// final int start = parseIntOrThrowFormatException(s.substring(lastColonIdx + 1, hyphenIdx),
// "invalid start position", s);
// final int stop = parseIntOrThrowFormatException(s.substring(hyphenIdx + 1),
// "invalid stop position", s);
// intervals.add(new Interval(sequence, start, stop));
// }
// return intervals;
// }
//
// private static int parseIntOrThrowFormatException(final String str, final String error, final String input) {
// try {
// return Integer.parseInt(str);
// } catch (final NumberFormatException ex) {
// throw new FormatException(error + " in interval '" + input + "': '" + str + "'");
// }
// }
// }
// Path: src/test/java/org/seqdoop/hadoop_bam/IntervalUtilTest.java
import htsjdk.samtools.util.Interval;
import org.apache.hadoop.conf.Configuration;
import org.junit.Assert;
import org.junit.Test;
import org.seqdoop.hadoop_bam.util.IntervalUtil;
import java.util.List;
import java.util.stream.Collectors;
import java.util.stream.Stream;
package org.seqdoop.hadoop_bam;
/**
* Unit tests for {@link IntervalUtil}.
*/
public class IntervalUtilTest {
@Test
public void testInvalidIntervals() {
final String[] invalidIntervals = {
"chr1", // full sequence interval are not allowed.
"chr1:12", // single position omitting stop is not allowed.
"chr1,chr2:121-123", // , are not allowed anywhere
"chr20:1,100-3,400", // , " "
"MT:35+", // , until end of contig + is not allowed.
"MT:13-31-1112", // too many positions.
"MT:-2112", // forgot the start position!
" MT : 113 - 1245" // blanks are not allowed either.
};
for (final String interval : invalidIntervals) {
final Configuration conf = new Configuration();
conf.set("prop-name", interval);
try { | IntervalUtil.getIntervals(conf, "prop-name"); |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/FastqOutputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
| import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.compress.CompressionCodec;
import org.apache.hadoop.io.compress.GzipCodec;
import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.output.TextOutputFormat;
import org.apache.hadoop.util.ReflectionUtils;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import java.io.DataOutputStream;
import java.io.OutputStream;
import java.io.IOException;
import java.nio.charset.Charset;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataOutputStream;
import org.apache.hadoop.fs.FileSystem; | // Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
/**
* Output format for the fastq format.
*/
// If a key is provided with the SequencedFragment, the key is used as the sequence
// id and the meta-info from the SequencedFragment (if any) is dropped.
// If the key is null, then the format will attempt to create an
// Illumina-style fastq id as specified in the Casava users' guide v1.8:
// @instrument:run number:flowcell ID:lane:tile:x-pos:y-pos \s+ read:is filtered:control number:index sequence
//
public class FastqOutputFormat extends TextOutputFormat<Text, SequencedFragment>
{
public static final String CONF_BASE_QUALITY_ENCODING = "hbam.fastq-output.base-quality-encoding";
public static final String CONF_BASE_QUALITY_ENCODING_DEFAULT = "sanger";
public static final Charset UTF8 = Charset.forName("UTF8");
static final byte[] PLUS_LINE;
static {
try {
PLUS_LINE = "\n+\n".getBytes("us-ascii");
} catch (java.io.UnsupportedEncodingException e) {
throw new RuntimeException("us-ascii encoding not supported!");
}
}
public static class FastqRecordWriter extends RecordWriter<Text,SequencedFragment>
{
protected StringBuilder sBuilder = new StringBuilder(800);
protected Text buffer = new Text();
protected OutputStream out; | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
// Path: src/main/java/org/seqdoop/hadoop_bam/FastqOutputFormat.java
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.compress.CompressionCodec;
import org.apache.hadoop.io.compress.GzipCodec;
import org.apache.hadoop.mapreduce.RecordWriter;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.output.TextOutputFormat;
import org.apache.hadoop.util.ReflectionUtils;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import java.io.DataOutputStream;
import java.io.OutputStream;
import java.io.IOException;
import java.nio.charset.Charset;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataOutputStream;
import org.apache.hadoop.fs.FileSystem;
// Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
/**
* Output format for the fastq format.
*/
// If a key is provided with the SequencedFragment, the key is used as the sequence
// id and the meta-info from the SequencedFragment (if any) is dropped.
// If the key is null, then the format will attempt to create an
// Illumina-style fastq id as specified in the Casava users' guide v1.8:
// @instrument:run number:flowcell ID:lane:tile:x-pos:y-pos \s+ read:is filtered:control number:index sequence
//
public class FastqOutputFormat extends TextOutputFormat<Text, SequencedFragment>
{
public static final String CONF_BASE_QUALITY_ENCODING = "hbam.fastq-output.base-quality-encoding";
public static final String CONF_BASE_QUALITY_ENCODING_DEFAULT = "sanger";
public static final Charset UTF8 = Charset.forName("UTF8");
static final byte[] PLUS_LINE;
static {
try {
PLUS_LINE = "\n+\n".getBytes("us-ascii");
} catch (java.io.UnsupportedEncodingException e) {
throw new RuntimeException("us-ascii encoding not supported!");
}
}
public static class FastqRecordWriter extends RecordWriter<Text,SequencedFragment>
{
protected StringBuilder sBuilder = new StringBuilder(800);
protected Text buffer = new Text();
protected OutputStream out; | protected BaseQualityEncoding baseQualityFormat; |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/QseqInputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
| import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.compress.CompressionCodec;
import org.apache.hadoop.io.compress.CompressionCodecFactory;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import java.io.IOException;
import java.io.InputStream;
import java.nio.charset.CharacterCodingException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path; | // Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
/**
* Reads the Illumina qseq sequence format.
* Key: instrument, run number, lane, tile, xpos, ypos, read number, delimited by ':' characters.
* Value: a SequencedFragment object representing the entry.
*/
public class QseqInputFormat extends FileInputFormat<Text,SequencedFragment>
{
public static final String CONF_BASE_QUALITY_ENCODING = "hbam.qseq-input.base-quality-encoding";
public static final String CONF_FILTER_FAILED_QC = "hbam.qseq-input.filter-failed-qc";
public static final String CONF_BASE_QUALITY_ENCODING_DEFAULT = "illumina";
public static class QseqRecordReader extends RecordReader<Text,SequencedFragment>
{
/*
* qseq format:
* 11 tab-separated columns
*
* 1) Instrument
* 2) Run id
* 3) Lane number
* 4) Tile number
* 5) X pos
* 6) Y pos
* 7) Index sequence (0 for runs without multiplexing)
* 8) Read Number
* 9) Base Sequence
* 10) Base Quality
* 11) Filter: did the read pass filtering? 0 - No, 1 - Yes.
*/
// start: first valid data index
private long start;
// end: first index value beyond the slice, i.e. slice is in range [start,end)
private long end;
// pos: current position in file
private long pos;
// file: the file being read
private Path file;
private LineReader lineReader;
private InputStream inputStream;
private Text currentKey = new Text();
private SequencedFragment currentValue = new SequencedFragment();
private Text buffer = new Text();
private static final int NUM_QSEQ_COLS = 11;
// for these, we have one per qseq field
private int[] fieldPositions = new int[NUM_QSEQ_COLS];
private int[] fieldLengths = new int[NUM_QSEQ_COLS];
| // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/QseqInputFormat.java
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.compress.CompressionCodec;
import org.apache.hadoop.io.compress.CompressionCodecFactory;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import java.io.IOException;
import java.io.InputStream;
import java.nio.charset.CharacterCodingException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
// Copyright (C) 2011-2012 CRS4.
//
// This file is part of Hadoop-BAM.
//
// Permission is hereby granted, free of charge, to any person obtaining a copy
// of this software and associated documentation files (the "Software"), to
// deal in the Software without restriction, including without limitation the
// rights to use, copy, modify, merge, publish, distribute, sublicense, and/or
// sell copies of the Software, and to permit persons to whom the Software is
// furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included in
// all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
// IN THE SOFTWARE.
package org.seqdoop.hadoop_bam;
/**
* Reads the Illumina qseq sequence format.
* Key: instrument, run number, lane, tile, xpos, ypos, read number, delimited by ':' characters.
* Value: a SequencedFragment object representing the entry.
*/
public class QseqInputFormat extends FileInputFormat<Text,SequencedFragment>
{
public static final String CONF_BASE_QUALITY_ENCODING = "hbam.qseq-input.base-quality-encoding";
public static final String CONF_FILTER_FAILED_QC = "hbam.qseq-input.filter-failed-qc";
public static final String CONF_BASE_QUALITY_ENCODING_DEFAULT = "illumina";
public static class QseqRecordReader extends RecordReader<Text,SequencedFragment>
{
/*
* qseq format:
* 11 tab-separated columns
*
* 1) Instrument
* 2) Run id
* 3) Lane number
* 4) Tile number
* 5) X pos
* 6) Y pos
* 7) Index sequence (0 for runs without multiplexing)
* 8) Read Number
* 9) Base Sequence
* 10) Base Quality
* 11) Filter: did the read pass filtering? 0 - No, 1 - Yes.
*/
// start: first valid data index
private long start;
// end: first index value beyond the slice, i.e. slice is in range [start,end)
private long end;
// pos: current position in file
private long pos;
// file: the file being read
private Path file;
private LineReader lineReader;
private InputStream inputStream;
private Text currentKey = new Text();
private SequencedFragment currentValue = new SequencedFragment();
private Text buffer = new Text();
private static final int NUM_QSEQ_COLS = 11;
// for these, we have one per qseq field
private int[] fieldPositions = new int[NUM_QSEQ_COLS];
private int[] fieldLengths = new int[NUM_QSEQ_COLS];
| private BaseQualityEncoding qualityEncoding; |
HadoopGenomics/Hadoop-BAM | src/main/java/org/seqdoop/hadoop_bam/QseqInputFormat.java | // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
| import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.compress.CompressionCodec;
import org.apache.hadoop.io.compress.CompressionCodecFactory;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import java.io.IOException;
import java.io.InputStream;
import java.nio.charset.CharacterCodingException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path; | // We use a temporary LineReader to read a partial line and find the
// start of the first one on or after our starting position.
// In case our slice starts right at the beginning of a line, we need to back
// up by one position and then discard the first line.
start -= 1;
stream.seek(start);
LineReader reader = new LineReader(stream);
int bytesRead = reader.readLine(buffer, (int)Math.min(MAX_LINE_LENGTH, end - start));
start = start + bytesRead;
stream.seek(start);
}
// else
// if start == 0 we're starting at the beginning of a line
pos = start;
}
protected void setConf(Configuration conf)
{
String encoding =
conf.get(QseqInputFormat.CONF_BASE_QUALITY_ENCODING,
conf.get(FormatConstants.CONF_INPUT_BASE_QUALITY_ENCODING,
CONF_BASE_QUALITY_ENCODING_DEFAULT));
if ("illumina".equals(encoding))
qualityEncoding = BaseQualityEncoding.Illumina;
else if ("sanger".equals(encoding))
qualityEncoding = BaseQualityEncoding.Sanger;
else
throw new RuntimeException("Unknown input base quality encoding value " + encoding);
| // Path: src/main/java/org/seqdoop/hadoop_bam/FormatConstants.java
// public enum BaseQualityEncoding { Illumina, Sanger };
//
// Path: src/main/java/org/seqdoop/hadoop_bam/util/ConfHelper.java
// public class ConfHelper
// {
// /**
// * Convert a string to a boolean.
// *
// * Accepted values: "yes", "true", "t", "y", "1"
// * "no", "false", "f", "n", "0"
// * All comparisons are case insensitive.
// *
// * If the value provided is null, defaultValue is returned.
// *
// * @exception IllegalArgumentException Thrown if value is not
// * null and doesn't match any of the accepted strings.
// */
// public static boolean parseBoolean(String value, boolean defaultValue)
// {
// if (value == null)
// return defaultValue;
//
// value = value.trim();
//
// // any of the following will
// final String[] acceptedTrue = new String[]{ "yes", "true", "t", "y", "1" };
// final String[] acceptedFalse = new String[]{ "no", "false", "f", "n", "0" };
//
// for (String possible: acceptedTrue)
// {
// if (possible.equalsIgnoreCase(value))
// return true;
// }
// for (String possible: acceptedFalse)
// {
// if (possible.equalsIgnoreCase(value))
// return false;
// }
//
// throw new IllegalArgumentException("Unrecognized boolean value '" + value + "'");
// }
//
// public static boolean parseBoolean(Configuration conf, String propertyName, boolean defaultValue)
// {
// return parseBoolean(conf.get(propertyName), defaultValue);
// }
// }
// Path: src/main/java/org/seqdoop/hadoop_bam/QseqInputFormat.java
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.compress.CompressionCodec;
import org.apache.hadoop.io.compress.CompressionCodecFactory;
import org.apache.hadoop.mapreduce.InputSplit;
import org.apache.hadoop.mapreduce.JobContext;
import org.apache.hadoop.mapreduce.RecordReader;
import org.apache.hadoop.mapreduce.TaskAttemptContext;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.input.FileSplit;
import org.seqdoop.hadoop_bam.FormatConstants.BaseQualityEncoding;
import org.seqdoop.hadoop_bam.util.ConfHelper;
import java.io.IOException;
import java.io.InputStream;
import java.nio.charset.CharacterCodingException;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataInputStream;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
// We use a temporary LineReader to read a partial line and find the
// start of the first one on or after our starting position.
// In case our slice starts right at the beginning of a line, we need to back
// up by one position and then discard the first line.
start -= 1;
stream.seek(start);
LineReader reader = new LineReader(stream);
int bytesRead = reader.readLine(buffer, (int)Math.min(MAX_LINE_LENGTH, end - start));
start = start + bytesRead;
stream.seek(start);
}
// else
// if start == 0 we're starting at the beginning of a line
pos = start;
}
protected void setConf(Configuration conf)
{
String encoding =
conf.get(QseqInputFormat.CONF_BASE_QUALITY_ENCODING,
conf.get(FormatConstants.CONF_INPUT_BASE_QUALITY_ENCODING,
CONF_BASE_QUALITY_ENCODING_DEFAULT));
if ("illumina".equals(encoding))
qualityEncoding = BaseQualityEncoding.Illumina;
else if ("sanger".equals(encoding))
qualityEncoding = BaseQualityEncoding.Sanger;
else
throw new RuntimeException("Unknown input base quality encoding value " + encoding);
| filterFailedQC = ConfHelper.parseBoolean( |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderServiceTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
| import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.notNullValue;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.argThat;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentMatcher;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class DataProviderServiceTest {
@Mock | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderServiceTest.java
import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.notNullValue;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.argThat;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentMatcher;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class DataProviderServiceTest {
@Mock | ScriptRepo scriptRepo; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderServiceTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
| import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.notNullValue;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.argThat;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentMatcher;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class DataProviderServiceTest {
@Mock
ScriptRepo scriptRepo;
| // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderServiceTest.java
import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.notNullValue;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.argThat;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentMatcher;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class DataProviderServiceTest {
@Mock
ScriptRepo scriptRepo;
| private DataProviderService service; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderServiceTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
| import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.notNullValue;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.argThat;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentMatcher;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class DataProviderServiceTest {
@Mock
ScriptRepo scriptRepo;
private DataProviderService service;
@Before
public void setUp() {
MockitoAnnotations.initMocks(this);
service = new DataProviderService(scriptRepo);
}
@Test
public void itShouldSaveTheScript() {
service.saveScript("The Script");
verify(scriptRepo, times(1)).save( | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderServiceTest.java
import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.notNullValue;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.argThat;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentMatcher;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class DataProviderServiceTest {
@Mock
ScriptRepo scriptRepo;
private DataProviderService service;
@Before
public void setUp() {
MockitoAnnotations.initMocks(this);
service = new DataProviderService(scriptRepo);
}
@Test
public void itShouldSaveTheScript() {
service.saveScript("The Script");
verify(scriptRepo, times(1)).save( | argThat(new ArgumentMatcher<SanitizationScript>() { |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
| import java.util.List;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.springframework.data.repository.PagingAndSortingRepository;
import org.springframework.data.repository.query.Param;
import org.springframework.data.rest.core.annotation.RepositoryRestResource; | package org.cloudfoundry.community.servicebroker.datalifecycle.repo;
@RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
public interface BrokerActionRepository extends | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java
import java.util.List;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.springframework.data.repository.PagingAndSortingRepository;
import org.springframework.data.repository.query.Param;
import org.springframework.data.rest.core.annotation.RepositoryRestResource;
package org.cloudfoundry.community.servicebroker.datalifecycle.repo;
@RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
public interface BrokerActionRepository extends | PagingAndSortingRepository<BrokerAction, String> { |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
| import java.util.List;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.springframework.data.repository.PagingAndSortingRepository;
import org.springframework.data.repository.query.Param;
import org.springframework.data.rest.core.annotation.RepositoryRestResource; | package org.cloudfoundry.community.servicebroker.datalifecycle.repo;
@RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
public interface BrokerActionRepository extends
PagingAndSortingRepository<BrokerAction, String> {
| // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java
import java.util.List;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.springframework.data.repository.PagingAndSortingRepository;
import org.springframework.data.repository.query.Param;
import org.springframework.data.rest.core.annotation.RepositoryRestResource;
package org.cloudfoundry.community.servicebroker.datalifecycle.repo;
@RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
public interface BrokerActionRepository extends
PagingAndSortingRepository<BrokerAction, String> {
| List<BrokerAction> findByState(@Param("state") BrokerActionState state); |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceManager.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/ServiceInstanceEntity.java
// @Entity
// public class ServiceInstanceEntity {
//
// @Id
// private String id;
//
// private String copyId;
//
// private String spaceGuid;
//
// private String serviceInstanceId;
//
// private String planGuid;
//
// private String orgGuid;
//
// private String dashboardUrl;
//
// private String serviceDefinitionId;
//
// private String lastOperationState;
//
// private String lastOperationDescription;
//
// public ServiceInstanceEntity() {
// }
//
// public ServiceInstanceEntity(ServiceInstance instance, String copyId) {
// this.setCopyId(copyId);
// this.setDashboardUrl(instance.getDashboardUrl());
// this.setOrgGuid(instance.getOrganizationGuid());
// this.setPlanGuid(instance.getPlanId());
// this.setServiceDefinitionId(instance.getServiceDefinitionId());
// this.setServiceInstanceId(instance.getServiceInstanceId());
// this.setId(instance.getServiceInstanceId());
// this.setSpaceGuid(instance.getSpaceGuid());
// this.setLastOperationDescription(instance
// .getServiceInstanceLastOperation().getDescription());
// this.setLastOperationState(instance.getServiceInstanceLastOperation()
// .getState());
// }
//
// public String getCopyId() {
// return copyId;
// }
//
// private void setCopyId(String copyId) {
// this.copyId = copyId;
// }
//
// public String getSpaceGuid() {
// return spaceGuid;
// }
//
// private void setSpaceGuid(String spaceGuid) {
// this.spaceGuid = spaceGuid;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getPlanGuid() {
// return planGuid;
// }
//
// private void setPlanGuid(String planGuid) {
// this.planGuid = planGuid;
// }
//
// public String getOrgGuid() {
// return orgGuid;
// }
//
// private void setOrgGuid(String orgGuid) {
// this.orgGuid = orgGuid;
// }
//
// public String getDashboardUrl() {
// return dashboardUrl;
// }
//
// private void setDashboardUrl(String dashboardUrl) {
// this.dashboardUrl = dashboardUrl;
// }
//
// public String getServiceDefinitionId() {
// return serviceDefinitionId;
// }
//
// private void setServiceDefinitionId(String serviceDefinitionId) {
// this.serviceDefinitionId = serviceDefinitionId;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
//
// public String getLastOperationState() {
// return lastOperationState;
// }
//
// private void setLastOperationState(String lastOperationState) {
// this.lastOperationState = lastOperationState;
// }
//
// public String getLastOperationDescription() {
// return lastOperationDescription;
// }
//
// private void setLastOperationDescription(String lastOperationDescription) {
// this.lastOperationDescription = lastOperationDescription;
// }
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ServiceInstanceRepo.java
// public interface ServiceInstanceRepo extends
// PagingAndSortingRepository<ServiceInstanceEntity, String> {
// }
| import java.util.ArrayList;
import java.util.Collection;
import java.util.List;
import org.apache.commons.lang3.tuple.ImmutablePair;
import org.apache.commons.lang3.tuple.Pair;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.ServiceInstanceEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ServiceInstanceRepo;
import org.cloudfoundry.community.servicebroker.model.CreateServiceInstanceRequest;
import org.cloudfoundry.community.servicebroker.model.OperationState;
import org.cloudfoundry.community.servicebroker.model.ServiceInstance;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceLastOperation; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class LCServiceInstanceManager {
private ServiceInstanceRepo repo;
public LCServiceInstanceManager(ServiceInstanceRepo repo) {
this.repo = repo;
}
public ServiceInstance getInstance(String id) { | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/ServiceInstanceEntity.java
// @Entity
// public class ServiceInstanceEntity {
//
// @Id
// private String id;
//
// private String copyId;
//
// private String spaceGuid;
//
// private String serviceInstanceId;
//
// private String planGuid;
//
// private String orgGuid;
//
// private String dashboardUrl;
//
// private String serviceDefinitionId;
//
// private String lastOperationState;
//
// private String lastOperationDescription;
//
// public ServiceInstanceEntity() {
// }
//
// public ServiceInstanceEntity(ServiceInstance instance, String copyId) {
// this.setCopyId(copyId);
// this.setDashboardUrl(instance.getDashboardUrl());
// this.setOrgGuid(instance.getOrganizationGuid());
// this.setPlanGuid(instance.getPlanId());
// this.setServiceDefinitionId(instance.getServiceDefinitionId());
// this.setServiceInstanceId(instance.getServiceInstanceId());
// this.setId(instance.getServiceInstanceId());
// this.setSpaceGuid(instance.getSpaceGuid());
// this.setLastOperationDescription(instance
// .getServiceInstanceLastOperation().getDescription());
// this.setLastOperationState(instance.getServiceInstanceLastOperation()
// .getState());
// }
//
// public String getCopyId() {
// return copyId;
// }
//
// private void setCopyId(String copyId) {
// this.copyId = copyId;
// }
//
// public String getSpaceGuid() {
// return spaceGuid;
// }
//
// private void setSpaceGuid(String spaceGuid) {
// this.spaceGuid = spaceGuid;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getPlanGuid() {
// return planGuid;
// }
//
// private void setPlanGuid(String planGuid) {
// this.planGuid = planGuid;
// }
//
// public String getOrgGuid() {
// return orgGuid;
// }
//
// private void setOrgGuid(String orgGuid) {
// this.orgGuid = orgGuid;
// }
//
// public String getDashboardUrl() {
// return dashboardUrl;
// }
//
// private void setDashboardUrl(String dashboardUrl) {
// this.dashboardUrl = dashboardUrl;
// }
//
// public String getServiceDefinitionId() {
// return serviceDefinitionId;
// }
//
// private void setServiceDefinitionId(String serviceDefinitionId) {
// this.serviceDefinitionId = serviceDefinitionId;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
//
// public String getLastOperationState() {
// return lastOperationState;
// }
//
// private void setLastOperationState(String lastOperationState) {
// this.lastOperationState = lastOperationState;
// }
//
// public String getLastOperationDescription() {
// return lastOperationDescription;
// }
//
// private void setLastOperationDescription(String lastOperationDescription) {
// this.lastOperationDescription = lastOperationDescription;
// }
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ServiceInstanceRepo.java
// public interface ServiceInstanceRepo extends
// PagingAndSortingRepository<ServiceInstanceEntity, String> {
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceManager.java
import java.util.ArrayList;
import java.util.Collection;
import java.util.List;
import org.apache.commons.lang3.tuple.ImmutablePair;
import org.apache.commons.lang3.tuple.Pair;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.ServiceInstanceEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ServiceInstanceRepo;
import org.cloudfoundry.community.servicebroker.model.CreateServiceInstanceRequest;
import org.cloudfoundry.community.servicebroker.model.OperationState;
import org.cloudfoundry.community.servicebroker.model.ServiceInstance;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceLastOperation;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class LCServiceInstanceManager {
private ServiceInstanceRepo repo;
public LCServiceInstanceManager(ServiceInstanceRepo repo) {
this.repo = repo;
}
public ServiceInstance getInstance(String id) { | ServiceInstanceEntity entity = repo.findOne(id); |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingService.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePair.java
// public class InstancePair {
//
// private String sourceInstance;
// private String copyInstance;
//
// public InstancePair(String sourceInstance, String copyInstance) {
// this.sourceInstance = sourceInstance;
// this.copyInstance = copyInstance;
// }
//
// public String getSource() {
// return sourceInstance;
// }
//
// public String getCopy() {
// return copyInstance;
// }
//
// @Override
// public boolean equals(Object lhs) {
// return lhs instanceof InstancePair && this.hashCode() == lhs.hashCode();
// }
//
// @Override
// public int hashCode() {
// return sourceInstance.hashCode() + copyInstance.hashCode();
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java
// @RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
// public interface BrokerActionRepository extends
// PagingAndSortingRepository<BrokerAction, String> {
//
// List<BrokerAction> findByState(@Param("state") BrokerActionState state);
// }
| import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.COMPLETE;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.FAILED;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.IN_PROGRESS;
import java.util.List;
import java.util.stream.Collectors;
import org.apache.log4j.Logger;
import org.cloudfoundry.community.servicebroker.datalifecycle.dto.InstancePair;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BrokerActionRepository;
import org.cloudfoundry.community.servicebroker.exception.ServiceBrokerException;
import org.cloudfoundry.community.servicebroker.exception.ServiceInstanceBindingExistsException;
import org.cloudfoundry.community.servicebroker.model.CreateServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.DeleteServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.cloudfoundry.community.servicebroker.service.ServiceInstanceBindingService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class LCServiceInstanceBindingService implements
ServiceInstanceBindingService {
| // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePair.java
// public class InstancePair {
//
// private String sourceInstance;
// private String copyInstance;
//
// public InstancePair(String sourceInstance, String copyInstance) {
// this.sourceInstance = sourceInstance;
// this.copyInstance = copyInstance;
// }
//
// public String getSource() {
// return sourceInstance;
// }
//
// public String getCopy() {
// return copyInstance;
// }
//
// @Override
// public boolean equals(Object lhs) {
// return lhs instanceof InstancePair && this.hashCode() == lhs.hashCode();
// }
//
// @Override
// public int hashCode() {
// return sourceInstance.hashCode() + copyInstance.hashCode();
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java
// @RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
// public interface BrokerActionRepository extends
// PagingAndSortingRepository<BrokerAction, String> {
//
// List<BrokerAction> findByState(@Param("state") BrokerActionState state);
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingService.java
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.COMPLETE;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.FAILED;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.IN_PROGRESS;
import java.util.List;
import java.util.stream.Collectors;
import org.apache.log4j.Logger;
import org.cloudfoundry.community.servicebroker.datalifecycle.dto.InstancePair;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BrokerActionRepository;
import org.cloudfoundry.community.servicebroker.exception.ServiceBrokerException;
import org.cloudfoundry.community.servicebroker.exception.ServiceInstanceBindingExistsException;
import org.cloudfoundry.community.servicebroker.model.CreateServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.DeleteServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.cloudfoundry.community.servicebroker.service.ServiceInstanceBindingService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class LCServiceInstanceBindingService implements
ServiceInstanceBindingService {
| private CopyProvider provider; |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingService.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePair.java
// public class InstancePair {
//
// private String sourceInstance;
// private String copyInstance;
//
// public InstancePair(String sourceInstance, String copyInstance) {
// this.sourceInstance = sourceInstance;
// this.copyInstance = copyInstance;
// }
//
// public String getSource() {
// return sourceInstance;
// }
//
// public String getCopy() {
// return copyInstance;
// }
//
// @Override
// public boolean equals(Object lhs) {
// return lhs instanceof InstancePair && this.hashCode() == lhs.hashCode();
// }
//
// @Override
// public int hashCode() {
// return sourceInstance.hashCode() + copyInstance.hashCode();
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java
// @RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
// public interface BrokerActionRepository extends
// PagingAndSortingRepository<BrokerAction, String> {
//
// List<BrokerAction> findByState(@Param("state") BrokerActionState state);
// }
| import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.COMPLETE;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.FAILED;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.IN_PROGRESS;
import java.util.List;
import java.util.stream.Collectors;
import org.apache.log4j.Logger;
import org.cloudfoundry.community.servicebroker.datalifecycle.dto.InstancePair;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BrokerActionRepository;
import org.cloudfoundry.community.servicebroker.exception.ServiceBrokerException;
import org.cloudfoundry.community.servicebroker.exception.ServiceInstanceBindingExistsException;
import org.cloudfoundry.community.servicebroker.model.CreateServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.DeleteServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.cloudfoundry.community.servicebroker.service.ServiceInstanceBindingService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class LCServiceInstanceBindingService implements
ServiceInstanceBindingService {
private CopyProvider provider;
private Logger logger = Logger
.getLogger(LCServiceInstanceBindingService.class);
private LCServiceInstanceBindingManager bindings;
private LCServiceInstanceService instanceService;
| // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePair.java
// public class InstancePair {
//
// private String sourceInstance;
// private String copyInstance;
//
// public InstancePair(String sourceInstance, String copyInstance) {
// this.sourceInstance = sourceInstance;
// this.copyInstance = copyInstance;
// }
//
// public String getSource() {
// return sourceInstance;
// }
//
// public String getCopy() {
// return copyInstance;
// }
//
// @Override
// public boolean equals(Object lhs) {
// return lhs instanceof InstancePair && this.hashCode() == lhs.hashCode();
// }
//
// @Override
// public int hashCode() {
// return sourceInstance.hashCode() + copyInstance.hashCode();
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerAction.java
// @Entity
// public class BrokerAction {
//
// @Id
// private String id;
//
// private String actor;
//
// private BrokerActionState state;
//
// private String action;
//
// public BrokerAction() {
// }
//
// public BrokerAction(String id, BrokerActionState state, String action) {
// this.setId(id);
// this.actor = id;
// this.state = state;
// this.action = action;
// }
//
// public String getActor() {
// return actor;
// }
//
// public void setActor(String actor) {
// this.actor = actor;
// }
//
// public BrokerActionState getState() {
// return state;
// }
//
// public void setState(BrokerActionState state) {
// this.state = state;
// }
//
// public String getAction() {
// return action;
// }
//
// public void setAction(String action) {
// this.action = action;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BrokerActionState.java
// public enum BrokerActionState {
// FAILED, COMPLETE, IN_PROGRESS
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BrokerActionRepository.java
// @RepositoryRestResource(collectionResourceRel = "actions", path = "actions")
// public interface BrokerActionRepository extends
// PagingAndSortingRepository<BrokerAction, String> {
//
// List<BrokerAction> findByState(@Param("state") BrokerActionState state);
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingService.java
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.COMPLETE;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.FAILED;
import static org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState.IN_PROGRESS;
import java.util.List;
import java.util.stream.Collectors;
import org.apache.log4j.Logger;
import org.cloudfoundry.community.servicebroker.datalifecycle.dto.InstancePair;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerAction;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BrokerActionState;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BrokerActionRepository;
import org.cloudfoundry.community.servicebroker.exception.ServiceBrokerException;
import org.cloudfoundry.community.servicebroker.exception.ServiceInstanceBindingExistsException;
import org.cloudfoundry.community.servicebroker.model.CreateServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.DeleteServiceInstanceBindingRequest;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.cloudfoundry.community.servicebroker.service.ServiceInstanceBindingService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class LCServiceInstanceBindingService implements
ServiceInstanceBindingService {
private CopyProvider provider;
private Logger logger = Logger
.getLogger(LCServiceInstanceBindingService.class);
private LCServiceInstanceBindingManager bindings;
private LCServiceInstanceService instanceService;
| private BrokerActionRepository brokerRepo; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/servicebinding/BrokerIntegrationTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogConfig.java
// public static String COPY = "copy";
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/DataLifecycleServiceBrokerApplication.java
// @SpringBootApplication
// public class DataLifecycleServiceBrokerApplication {
//
// public static void main(String[] args) {
// SpringApplication
// .run(DataLifecycleServiceBrokerApplication.class, args);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
| import static com.jayway.restassured.RestAssured.given;
import static org.cloudfoundry.community.servicebroker.datalifecycle.config.LCCatalogConfig.COPY;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.notNullValue;
import java.sql.SQLException;
import java.util.Date;
import net.minidev.json.JSONObject;
import org.apache.http.entity.ContentType;
import org.cloudfoundry.community.servicebroker.datalifecycle.DataLifecycleServiceBrokerApplication;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstance;
import org.junit.Before;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import org.junit.runner.RunWith;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.boot.test.IntegrationTest;
import org.springframework.boot.test.SpringApplicationConfiguration;
import org.springframework.http.HttpStatus;
import org.springframework.test.context.junit4.SpringJUnit4ClassRunner;
import org.springframework.test.context.web.WebAppConfiguration;
import com.amazonaws.services.ec2.AmazonEC2Client;
import com.amazonaws.util.json.JSONException;
import com.jayway.restassured.RestAssured;
import com.jayway.restassured.builder.RequestSpecBuilder;
import com.jayway.restassured.response.Response;
import com.jayway.restassured.specification.RequestSpecification; | package org.cloudfoundry.community.servicebroker.datalifecycle.servicebinding;
@RunWith(SpringJUnit4ClassRunner.class)
@SpringApplicationConfiguration(classes = DataLifecycleServiceBrokerApplication.class)
@WebAppConfiguration
@IntegrationTest("server.port:0")
@Category(IntegrationTest.class)
/**
* These tests assume an empty VPC with one instance (the prod one) running.
* You can set env variables to effect where and how the ec2Client behaves,
* see README.md in the project root
*
*/
public class BrokerIntegrationTest {
// TODO DRY w/ Catalog test
@Value("${local.server.port}")
private int port;
@Value("#{environment.SECURITY_USER_NAME}")
private String username;
@Value("#{environment.SECURITY_USER_PASSWORD}")
private String password;
@Autowired
private AmazonEC2Client ec2Client;
@Value("#{environment.SOURCE_INSTANCE_ID}")
private String sourceInstanceId;
@Autowired | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogConfig.java
// public static String COPY = "copy";
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/DataLifecycleServiceBrokerApplication.java
// @SpringBootApplication
// public class DataLifecycleServiceBrokerApplication {
//
// public static void main(String[] args) {
// SpringApplication
// .run(DataLifecycleServiceBrokerApplication.class, args);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/servicebinding/BrokerIntegrationTest.java
import static com.jayway.restassured.RestAssured.given;
import static org.cloudfoundry.community.servicebroker.datalifecycle.config.LCCatalogConfig.COPY;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.notNullValue;
import java.sql.SQLException;
import java.util.Date;
import net.minidev.json.JSONObject;
import org.apache.http.entity.ContentType;
import org.cloudfoundry.community.servicebroker.datalifecycle.DataLifecycleServiceBrokerApplication;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstance;
import org.junit.Before;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import org.junit.runner.RunWith;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.boot.test.IntegrationTest;
import org.springframework.boot.test.SpringApplicationConfiguration;
import org.springframework.http.HttpStatus;
import org.springframework.test.context.junit4.SpringJUnit4ClassRunner;
import org.springframework.test.context.web.WebAppConfiguration;
import com.amazonaws.services.ec2.AmazonEC2Client;
import com.amazonaws.util.json.JSONException;
import com.jayway.restassured.RestAssured;
import com.jayway.restassured.builder.RequestSpecBuilder;
import com.jayway.restassured.response.Response;
import com.jayway.restassured.specification.RequestSpecification;
package org.cloudfoundry.community.servicebroker.datalifecycle.servicebinding;
@RunWith(SpringJUnit4ClassRunner.class)
@SpringApplicationConfiguration(classes = DataLifecycleServiceBrokerApplication.class)
@WebAppConfiguration
@IntegrationTest("server.port:0")
@Category(IntegrationTest.class)
/**
* These tests assume an empty VPC with one instance (the prod one) running.
* You can set env variables to effect where and how the ec2Client behaves,
* see README.md in the project root
*
*/
public class BrokerIntegrationTest {
// TODO DRY w/ Catalog test
@Value("${local.server.port}")
private int port;
@Value("#{environment.SECURITY_USER_NAME}")
private String username;
@Value("#{environment.SECURITY_USER_PASSWORD}")
private String password;
@Autowired
private AmazonEC2Client ec2Client;
@Value("#{environment.SOURCE_INSTANCE_ID}")
private String sourceInstanceId;
@Autowired | private BindingRepository bindingRepo; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/servicebinding/BrokerIntegrationTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogConfig.java
// public static String COPY = "copy";
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/DataLifecycleServiceBrokerApplication.java
// @SpringBootApplication
// public class DataLifecycleServiceBrokerApplication {
//
// public static void main(String[] args) {
// SpringApplication
// .run(DataLifecycleServiceBrokerApplication.class, args);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
| import static com.jayway.restassured.RestAssured.given;
import static org.cloudfoundry.community.servicebroker.datalifecycle.config.LCCatalogConfig.COPY;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.notNullValue;
import java.sql.SQLException;
import java.util.Date;
import net.minidev.json.JSONObject;
import org.apache.http.entity.ContentType;
import org.cloudfoundry.community.servicebroker.datalifecycle.DataLifecycleServiceBrokerApplication;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstance;
import org.junit.Before;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import org.junit.runner.RunWith;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.boot.test.IntegrationTest;
import org.springframework.boot.test.SpringApplicationConfiguration;
import org.springframework.http.HttpStatus;
import org.springframework.test.context.junit4.SpringJUnit4ClassRunner;
import org.springframework.test.context.web.WebAppConfiguration;
import com.amazonaws.services.ec2.AmazonEC2Client;
import com.amazonaws.util.json.JSONException;
import com.jayway.restassured.RestAssured;
import com.jayway.restassured.builder.RequestSpecBuilder;
import com.jayway.restassured.response.Response;
import com.jayway.restassured.specification.RequestSpecification; |
givenTheBroker()
.delete("/v2/service_instances/1234?service_id=lifecycle-sb&plan_id=copy&accepts_incomplete=true")
.then().statusCode(410);
validateNothingProvisioned();
deleteScript();
}
private void unprovisionAndUnbindCopy() throws Exception {
givenTheBroker()
.delete("/v2/service_instances/1234/service_bindings/1234521?service_id=lifecycle-sb&plan_id=copy")
.then().statusCode(200);
validateNoBinding();
givenTheBroker()
.delete("/v2/service_instances/1234?service_id=lifecycle-sb&plan_id=copy&accepts_incomplete=true")
.then().statusCode(202);
validateNothingProvisioned();
}
private void provisionAndBindCopy() throws Exception {
validateNoBinding();
validateNothingProvisioned();
uploadScript();
JSONObject serviceInstance = new JSONObject();
serviceInstance.put("service_id", "lifecycle-sb"); | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogConfig.java
// public static String COPY = "copy";
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/DataLifecycleServiceBrokerApplication.java
// @SpringBootApplication
// public class DataLifecycleServiceBrokerApplication {
//
// public static void main(String[] args) {
// SpringApplication
// .run(DataLifecycleServiceBrokerApplication.class, args);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/servicebinding/BrokerIntegrationTest.java
import static com.jayway.restassured.RestAssured.given;
import static org.cloudfoundry.community.servicebroker.datalifecycle.config.LCCatalogConfig.COPY;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.notNullValue;
import java.sql.SQLException;
import java.util.Date;
import net.minidev.json.JSONObject;
import org.apache.http.entity.ContentType;
import org.cloudfoundry.community.servicebroker.datalifecycle.DataLifecycleServiceBrokerApplication;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstance;
import org.junit.Before;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import org.junit.runner.RunWith;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.boot.test.IntegrationTest;
import org.springframework.boot.test.SpringApplicationConfiguration;
import org.springframework.http.HttpStatus;
import org.springframework.test.context.junit4.SpringJUnit4ClassRunner;
import org.springframework.test.context.web.WebAppConfiguration;
import com.amazonaws.services.ec2.AmazonEC2Client;
import com.amazonaws.util.json.JSONException;
import com.jayway.restassured.RestAssured;
import com.jayway.restassured.builder.RequestSpecBuilder;
import com.jayway.restassured.response.Response;
import com.jayway.restassured.specification.RequestSpecification;
givenTheBroker()
.delete("/v2/service_instances/1234?service_id=lifecycle-sb&plan_id=copy&accepts_incomplete=true")
.then().statusCode(410);
validateNothingProvisioned();
deleteScript();
}
private void unprovisionAndUnbindCopy() throws Exception {
givenTheBroker()
.delete("/v2/service_instances/1234/service_bindings/1234521?service_id=lifecycle-sb&plan_id=copy")
.then().statusCode(200);
validateNoBinding();
givenTheBroker()
.delete("/v2/service_instances/1234?service_id=lifecycle-sb&plan_id=copy&accepts_incomplete=true")
.then().statusCode(202);
validateNothingProvisioned();
}
private void provisionAndBindCopy() throws Exception {
validateNoBinding();
validateNothingProvisioned();
uploadScript();
JSONObject serviceInstance = new JSONObject();
serviceInstance.put("service_id", "lifecycle-sb"); | serviceInstance.put("plan_id", COPY); |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.springframework.data.repository.PagingAndSortingRepository;
import org.springframework.data.rest.core.annotation.RepositoryRestResource; | package org.cloudfoundry.community.servicebroker.datalifecycle.repo;
@RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
public interface BindingRepository extends | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.springframework.data.repository.PagingAndSortingRepository;
import org.springframework.data.rest.core.annotation.RepositoryRestResource;
package org.cloudfoundry.community.servicebroker.datalifecycle.repo;
@RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
public interface BindingRepository extends | PagingAndSortingRepository<BindingEntity, String> { |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeController.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
| import net.minidev.json.JSONObject;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.http.HttpHeaders;
import org.springframework.http.HttpStatus;
import org.springframework.http.ResponseEntity;
import org.springframework.web.bind.annotation.RequestBody;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestMethod;
import org.springframework.web.bind.annotation.RestController;
import org.springframework.web.util.UriComponents;
import org.springframework.web.util.UriComponentsBuilder;
import java.util.Map; | package org.cloudfoundry.community.servicebroker.datalifecycle.controller;
@RestController
class SanitizeController {
@Autowired | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeController.java
import net.minidev.json.JSONObject;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.http.HttpHeaders;
import org.springframework.http.HttpStatus;
import org.springframework.http.ResponseEntity;
import org.springframework.web.bind.annotation.RequestBody;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestMethod;
import org.springframework.web.bind.annotation.RestController;
import org.springframework.web.util.UriComponents;
import org.springframework.web.util.UriComponentsBuilder;
import java.util.Map;
package org.cloudfoundry.community.servicebroker.datalifecycle.controller;
@RestController
class SanitizeController {
@Autowired | private DataProviderService dataService; |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCServiceInstanceManagerConfig.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ServiceInstanceRepo.java
// public interface ServiceInstanceRepo extends
// PagingAndSortingRepository<ServiceInstanceEntity, String> {
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceManager.java
// public class LCServiceInstanceManager {
// private ServiceInstanceRepo repo;
//
// public LCServiceInstanceManager(ServiceInstanceRepo repo) {
// this.repo = repo;
// }
//
// public ServiceInstance getInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return convert(entity);
// }
//
// public String getCopyIdForInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return null == entity ? null : entity.getCopyId();
// }
//
// // TODO this could have a more natural data structure.
// public Collection<Pair<String, ServiceInstance>> getInstances() {
// List<Pair<String, ServiceInstance>> instancePairs = new ArrayList<Pair<String, ServiceInstance>>();
// repo.findAll().forEach(
// e -> instancePairs
// .add(new ImmutablePair<String, ServiceInstance>(e
// .getCopyId(), convert(e))));
// return instancePairs;
// }
//
// public void saveInstance(ServiceInstance instance, String copyId) {
// repo.save(new ServiceInstanceEntity(instance, copyId));
// }
//
// public ServiceInstance removeInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// if (null != entity) {
// repo.delete(id);
// }
// return convert(entity);
// }
//
// private ServiceInstance convert(ServiceInstanceEntity i) {
// if (null == i) {
// return null;
// }
// // TODO Gross, the base should handle this for us.
// OperationState state = null;
// switch (i.getLastOperationState()) {
// case "in progress":
// state = OperationState.IN_PROGRESS;
// break;
// case "succeeded":
// state = OperationState.SUCCEEDED;
// break;
// case "failed":
// state = OperationState.FAILED;
// break;
// default:
// assert (false);
// }
// // @formatter:off
// return new ServiceInstance(new CreateServiceInstanceRequest(
// i.getServiceDefinitionId(), i.getPlanGuid(), i.getOrgGuid(),
// i.getSpaceGuid(), true).withServiceInstanceId(i
// .getServiceInstanceId()))
// .withDashboardUrl(i.getDashboardUrl())
// .and()
// .withLastOperation(
// new ServiceInstanceLastOperation(i
// .getLastOperationDescription(), state));
// // @formatter:on
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ServiceInstanceRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class LCServiceInstanceManagerConfig {
@Autowired
private | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ServiceInstanceRepo.java
// public interface ServiceInstanceRepo extends
// PagingAndSortingRepository<ServiceInstanceEntity, String> {
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceManager.java
// public class LCServiceInstanceManager {
// private ServiceInstanceRepo repo;
//
// public LCServiceInstanceManager(ServiceInstanceRepo repo) {
// this.repo = repo;
// }
//
// public ServiceInstance getInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return convert(entity);
// }
//
// public String getCopyIdForInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return null == entity ? null : entity.getCopyId();
// }
//
// // TODO this could have a more natural data structure.
// public Collection<Pair<String, ServiceInstance>> getInstances() {
// List<Pair<String, ServiceInstance>> instancePairs = new ArrayList<Pair<String, ServiceInstance>>();
// repo.findAll().forEach(
// e -> instancePairs
// .add(new ImmutablePair<String, ServiceInstance>(e
// .getCopyId(), convert(e))));
// return instancePairs;
// }
//
// public void saveInstance(ServiceInstance instance, String copyId) {
// repo.save(new ServiceInstanceEntity(instance, copyId));
// }
//
// public ServiceInstance removeInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// if (null != entity) {
// repo.delete(id);
// }
// return convert(entity);
// }
//
// private ServiceInstance convert(ServiceInstanceEntity i) {
// if (null == i) {
// return null;
// }
// // TODO Gross, the base should handle this for us.
// OperationState state = null;
// switch (i.getLastOperationState()) {
// case "in progress":
// state = OperationState.IN_PROGRESS;
// break;
// case "succeeded":
// state = OperationState.SUCCEEDED;
// break;
// case "failed":
// state = OperationState.FAILED;
// break;
// default:
// assert (false);
// }
// // @formatter:off
// return new ServiceInstance(new CreateServiceInstanceRequest(
// i.getServiceDefinitionId(), i.getPlanGuid(), i.getOrgGuid(),
// i.getSpaceGuid(), true).withServiceInstanceId(i
// .getServiceInstanceId()))
// .withDashboardUrl(i.getDashboardUrl())
// .and()
// .withLastOperation(
// new ServiceInstanceLastOperation(i
// .getLastOperationDescription(), state));
// // @formatter:on
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCServiceInstanceManagerConfig.java
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ServiceInstanceRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class LCServiceInstanceManagerConfig {
@Autowired
private | ServiceInstanceRepo repo; |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCServiceInstanceManagerConfig.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ServiceInstanceRepo.java
// public interface ServiceInstanceRepo extends
// PagingAndSortingRepository<ServiceInstanceEntity, String> {
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceManager.java
// public class LCServiceInstanceManager {
// private ServiceInstanceRepo repo;
//
// public LCServiceInstanceManager(ServiceInstanceRepo repo) {
// this.repo = repo;
// }
//
// public ServiceInstance getInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return convert(entity);
// }
//
// public String getCopyIdForInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return null == entity ? null : entity.getCopyId();
// }
//
// // TODO this could have a more natural data structure.
// public Collection<Pair<String, ServiceInstance>> getInstances() {
// List<Pair<String, ServiceInstance>> instancePairs = new ArrayList<Pair<String, ServiceInstance>>();
// repo.findAll().forEach(
// e -> instancePairs
// .add(new ImmutablePair<String, ServiceInstance>(e
// .getCopyId(), convert(e))));
// return instancePairs;
// }
//
// public void saveInstance(ServiceInstance instance, String copyId) {
// repo.save(new ServiceInstanceEntity(instance, copyId));
// }
//
// public ServiceInstance removeInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// if (null != entity) {
// repo.delete(id);
// }
// return convert(entity);
// }
//
// private ServiceInstance convert(ServiceInstanceEntity i) {
// if (null == i) {
// return null;
// }
// // TODO Gross, the base should handle this for us.
// OperationState state = null;
// switch (i.getLastOperationState()) {
// case "in progress":
// state = OperationState.IN_PROGRESS;
// break;
// case "succeeded":
// state = OperationState.SUCCEEDED;
// break;
// case "failed":
// state = OperationState.FAILED;
// break;
// default:
// assert (false);
// }
// // @formatter:off
// return new ServiceInstance(new CreateServiceInstanceRequest(
// i.getServiceDefinitionId(), i.getPlanGuid(), i.getOrgGuid(),
// i.getSpaceGuid(), true).withServiceInstanceId(i
// .getServiceInstanceId()))
// .withDashboardUrl(i.getDashboardUrl())
// .and()
// .withLastOperation(
// new ServiceInstanceLastOperation(i
// .getLastOperationDescription(), state));
// // @formatter:on
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ServiceInstanceRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class LCServiceInstanceManagerConfig {
@Autowired
private
ServiceInstanceRepo repo;
@Bean | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ServiceInstanceRepo.java
// public interface ServiceInstanceRepo extends
// PagingAndSortingRepository<ServiceInstanceEntity, String> {
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceManager.java
// public class LCServiceInstanceManager {
// private ServiceInstanceRepo repo;
//
// public LCServiceInstanceManager(ServiceInstanceRepo repo) {
// this.repo = repo;
// }
//
// public ServiceInstance getInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return convert(entity);
// }
//
// public String getCopyIdForInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// return null == entity ? null : entity.getCopyId();
// }
//
// // TODO this could have a more natural data structure.
// public Collection<Pair<String, ServiceInstance>> getInstances() {
// List<Pair<String, ServiceInstance>> instancePairs = new ArrayList<Pair<String, ServiceInstance>>();
// repo.findAll().forEach(
// e -> instancePairs
// .add(new ImmutablePair<String, ServiceInstance>(e
// .getCopyId(), convert(e))));
// return instancePairs;
// }
//
// public void saveInstance(ServiceInstance instance, String copyId) {
// repo.save(new ServiceInstanceEntity(instance, copyId));
// }
//
// public ServiceInstance removeInstance(String id) {
// ServiceInstanceEntity entity = repo.findOne(id);
// if (null != entity) {
// repo.delete(id);
// }
// return convert(entity);
// }
//
// private ServiceInstance convert(ServiceInstanceEntity i) {
// if (null == i) {
// return null;
// }
// // TODO Gross, the base should handle this for us.
// OperationState state = null;
// switch (i.getLastOperationState()) {
// case "in progress":
// state = OperationState.IN_PROGRESS;
// break;
// case "succeeded":
// state = OperationState.SUCCEEDED;
// break;
// case "failed":
// state = OperationState.FAILED;
// break;
// default:
// assert (false);
// }
// // @formatter:off
// return new ServiceInstance(new CreateServiceInstanceRequest(
// i.getServiceDefinitionId(), i.getPlanGuid(), i.getOrgGuid(),
// i.getSpaceGuid(), true).withServiceInstanceId(i
// .getServiceInstanceId()))
// .withDashboardUrl(i.getDashboardUrl())
// .and()
// .withLastOperation(
// new ServiceInstanceLastOperation(i
// .getLastOperationDescription(), state));
// // @formatter:on
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCServiceInstanceManagerConfig.java
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ServiceInstanceRepo;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class LCServiceInstanceManagerConfig {
@Autowired
private
ServiceInstanceRepo repo;
@Bean | LCServiceInstanceManager newLCServiceInstanceManager() { |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class DataProviderService {
| // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class DataProviderService {
| private ScriptRepo scriptRepo; |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class DataProviderService {
private ScriptRepo scriptRepo;
@Autowired
public DataProviderService(ScriptRepo scriptRepo) {
this.scriptRepo = scriptRepo;
}
public void saveScript(String script) { | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/SanitizationScript.java
// @Entity
// public class SanitizationScript {
//
// public final static long ID = 1;
//
// @Id
// private long id = ID;
//
// private String script;
//
// protected SanitizationScript() {
// }
//
// public SanitizationScript(final String script) {
// this.setScript(script);
// }
//
// public String getScript() {
// return script;
// }
//
// private void setScript(String script) {
// this.script = script;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/ScriptRepo.java
// public interface ScriptRepo extends CrudRepository<SanitizationScript, Long> {
//
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
import org.cloudfoundry.community.servicebroker.datalifecycle.model.SanitizationScript;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.ScriptRepo;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
@Service
public class DataProviderService {
private ScriptRepo scriptRepo;
@Autowired
public DataProviderService(ScriptRepo scriptRepo) {
this.scriptRepo = scriptRepo;
}
public void saveScript(String script) { | scriptRepo.save(new SanitizationScript(script)); |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/BindingManagerConfig.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class BindingManagerConfig {
@Autowired | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/BindingManagerConfig.java
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class BindingManagerConfig {
@Autowired | private BindingRepository repo; |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/BindingManagerConfig.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class BindingManagerConfig {
@Autowired
private BindingRepository repo;
@Bean | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/BindingManagerConfig.java
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class BindingManagerConfig {
@Autowired
private BindingRepository repo;
@Bean | public LCServiceInstanceBindingManager bindingRepo() { |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogConfig.java
// @Configuration
// public class LCCatalogConfig {
//
// private ServiceDefinition postgresServiceDefinition;
//
// public static String PRODUCTION = "prod";
// public static String COPY = "copy";
//
// public LCCatalogConfig() {
// List<Plan> plans = new ArrayList<Plan>();
// plans.add(new Plan(PRODUCTION, PRODUCTION, "The production datasource",
// getProdMetadata()));
// plans.add(new Plan(COPY, COPY, "Copy of production datasource",
// getCopyMetadata()));
// postgresServiceDefinition = new ServiceDefinition("lifecycle-sb",
// "lifecycle-sb", "Postgres Running in AWS", true, plans);
// postgresServiceDefinition.setPlanUpdatable(false);
// }
//
// private Map<String, Object> getProdMetadata() {
// return new HashMap<String, Object>();
// }
//
// private Map<String, Object> getCopyMetadata() {
// return new HashMap<String, Object>();
// }
//
// @Bean
// public Catalog catalog() {
// return new Catalog(Collections.singletonList(postgresServiceDefinition));
// }
// }
| import static org.hamcrest.Matchers.hasSize;
import static org.junit.Assert.assertThat;
import org.cloudfoundry.community.servicebroker.datalifecycle.config.LCCatalogConfig;
import org.cloudfoundry.community.servicebroker.model.Catalog;
import org.junit.Before;
import org.junit.Test; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
public class LCCatalogTest {
private Catalog pgCat;
@Before
public void setUp() { | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogConfig.java
// @Configuration
// public class LCCatalogConfig {
//
// private ServiceDefinition postgresServiceDefinition;
//
// public static String PRODUCTION = "prod";
// public static String COPY = "copy";
//
// public LCCatalogConfig() {
// List<Plan> plans = new ArrayList<Plan>();
// plans.add(new Plan(PRODUCTION, PRODUCTION, "The production datasource",
// getProdMetadata()));
// plans.add(new Plan(COPY, COPY, "Copy of production datasource",
// getCopyMetadata()));
// postgresServiceDefinition = new ServiceDefinition("lifecycle-sb",
// "lifecycle-sb", "Postgres Running in AWS", true, plans);
// postgresServiceDefinition.setPlanUpdatable(false);
// }
//
// private Map<String, Object> getProdMetadata() {
// return new HashMap<String, Object>();
// }
//
// private Map<String, Object> getCopyMetadata() {
// return new HashMap<String, Object>();
// }
//
// @Bean
// public Catalog catalog() {
// return new Catalog(Collections.singletonList(postgresServiceDefinition));
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/LCCatalogTest.java
import static org.hamcrest.Matchers.hasSize;
import static org.junit.Assert.assertThat;
import org.cloudfoundry.community.servicebroker.datalifecycle.config.LCCatalogConfig;
import org.cloudfoundry.community.servicebroker.model.Catalog;
import org.junit.Before;
import org.junit.Test;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
public class LCCatalogTest {
private Catalog pgCat;
@Before
public void setUp() { | pgCat = new LCCatalogConfig().catalog(); |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/DataProvider.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/exception/DataProviderSanitizationFailedException.java
// public class DataProviderSanitizationFailedException extends Exception {
//
// private static final long serialVersionUID = 1L;
//
// public DataProviderSanitizationFailedException(String msg) {
// super(msg);
// }
// }
| import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.exception.DataProviderSanitizationFailedException; | package org.cloudfoundry.community.servicebroker.datalifecycle.provider;
public interface DataProvider {
/**
* Sanitize the data source with the incoming script. This method is called
* upon provision and typically removes or modifies sensitive data from the
* database. This method is always called in order to ensure the sanitize
* point has a chance to perform operations which my not be scripted.
*
* Creds are obtained from the CopyProvider after creating a copy, so the
* DataProvider needs to understand the object, as it's opaque to the
* framework.
*
* @param script
* to run against the data source, may be null
* @param creds
* to login to service instance, provided by the CopyProvider
* @throws DataProviderSanitizationFailedException
* if the script fails.
*/
void sanitize(String script, Map<String, Object> creds) | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/exception/DataProviderSanitizationFailedException.java
// public class DataProviderSanitizationFailedException extends Exception {
//
// private static final long serialVersionUID = 1L;
//
// public DataProviderSanitizationFailedException(String msg) {
// super(msg);
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/DataProvider.java
import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.exception.DataProviderSanitizationFailedException;
package org.cloudfoundry.community.servicebroker.datalifecycle.provider;
public interface DataProvider {
/**
* Sanitize the data source with the incoming script. This method is called
* upon provision and typically removes or modifies sensitive data from the
* database. This method is always called in order to ensure the sanitize
* point has a chance to perform operations which my not be scripted.
*
* Creds are obtained from the CopyProvider after creating a copy, so the
* DataProvider needs to understand the object, as it's opaque to the
* framework.
*
* @param script
* to run against the data source, may be null
* @param creds
* to login to service instance, provided by the CopyProvider
* @throws DataProviderSanitizationFailedException
* if the script fails.
*/
void sanitize(String script, Map<String, Object> creds) | throws DataProviderSanitizationFailedException; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeControllerTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeController.java
// @RestController
// class SanitizeController {
//
// @Autowired
// private DataProviderService dataService;
//
// private static final String location = "/api/sanitizescript";
//
// @RequestMapping(value = location, method = RequestMethod.GET)
// public ResponseEntity<JSONObject> getSanitizeScript() {
// String script = dataService.getScript();
// JSONObject response = new JSONObject();
// if (null != script) {
//
// response.put("script", script);
// }
// return new ResponseEntity<JSONObject>(response, HttpStatus.OK);
// }
//
// @RequestMapping(value = location, method = RequestMethod.POST, produces = "application/json")
// public ResponseEntity<String> addSanitizeScript(@RequestBody Map<String, Object> script) {
//
// dataService.saveScript((String) script.get("script"));
// String response = "{}";
//
// HttpHeaders headers = new HttpHeaders();
// UriComponents components = UriComponentsBuilder.fromPath(location)
// .buildAndExpand();
//
// headers.setLocation(components.toUri());
// return new ResponseEntity<String>(response, headers, HttpStatus.CREATED);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
| import static org.hamcrest.Matchers.is;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.get;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.post;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.content;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.header;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.jsonPath;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.status;
import net.minidev.json.JSONObject;
import org.cloudfoundry.community.servicebroker.datalifecycle.controller.SanitizeController;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.InjectMocks;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.springframework.http.MediaType;
import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
import org.springframework.test.web.servlet.MockMvc;
import org.springframework.test.web.servlet.setup.MockMvcBuilders; | package org.cloudfoundry.community.servicebroker.datalifecycle.controller;
public class SanitizeControllerTest {
private MockMvc mockMvc;
private String script = "drop * from table";
private String location = "/api/sanitizescript";
@InjectMocks | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeController.java
// @RestController
// class SanitizeController {
//
// @Autowired
// private DataProviderService dataService;
//
// private static final String location = "/api/sanitizescript";
//
// @RequestMapping(value = location, method = RequestMethod.GET)
// public ResponseEntity<JSONObject> getSanitizeScript() {
// String script = dataService.getScript();
// JSONObject response = new JSONObject();
// if (null != script) {
//
// response.put("script", script);
// }
// return new ResponseEntity<JSONObject>(response, HttpStatus.OK);
// }
//
// @RequestMapping(value = location, method = RequestMethod.POST, produces = "application/json")
// public ResponseEntity<String> addSanitizeScript(@RequestBody Map<String, Object> script) {
//
// dataService.saveScript((String) script.get("script"));
// String response = "{}";
//
// HttpHeaders headers = new HttpHeaders();
// UriComponents components = UriComponentsBuilder.fromPath(location)
// .buildAndExpand();
//
// headers.setLocation(components.toUri());
// return new ResponseEntity<String>(response, headers, HttpStatus.CREATED);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeControllerTest.java
import static org.hamcrest.Matchers.is;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.get;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.post;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.content;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.header;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.jsonPath;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.status;
import net.minidev.json.JSONObject;
import org.cloudfoundry.community.servicebroker.datalifecycle.controller.SanitizeController;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.InjectMocks;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.springframework.http.MediaType;
import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
import org.springframework.test.web.servlet.MockMvc;
import org.springframework.test.web.servlet.setup.MockMvcBuilders;
package org.cloudfoundry.community.servicebroker.datalifecycle.controller;
public class SanitizeControllerTest {
private MockMvc mockMvc;
private String script = "drop * from table";
private String location = "/api/sanitizescript";
@InjectMocks | SanitizeController sanitizeController; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeControllerTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeController.java
// @RestController
// class SanitizeController {
//
// @Autowired
// private DataProviderService dataService;
//
// private static final String location = "/api/sanitizescript";
//
// @RequestMapping(value = location, method = RequestMethod.GET)
// public ResponseEntity<JSONObject> getSanitizeScript() {
// String script = dataService.getScript();
// JSONObject response = new JSONObject();
// if (null != script) {
//
// response.put("script", script);
// }
// return new ResponseEntity<JSONObject>(response, HttpStatus.OK);
// }
//
// @RequestMapping(value = location, method = RequestMethod.POST, produces = "application/json")
// public ResponseEntity<String> addSanitizeScript(@RequestBody Map<String, Object> script) {
//
// dataService.saveScript((String) script.get("script"));
// String response = "{}";
//
// HttpHeaders headers = new HttpHeaders();
// UriComponents components = UriComponentsBuilder.fromPath(location)
// .buildAndExpand();
//
// headers.setLocation(components.toUri());
// return new ResponseEntity<String>(response, headers, HttpStatus.CREATED);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
| import static org.hamcrest.Matchers.is;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.get;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.post;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.content;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.header;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.jsonPath;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.status;
import net.minidev.json.JSONObject;
import org.cloudfoundry.community.servicebroker.datalifecycle.controller.SanitizeController;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.InjectMocks;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.springframework.http.MediaType;
import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
import org.springframework.test.web.servlet.MockMvc;
import org.springframework.test.web.servlet.setup.MockMvcBuilders; | package org.cloudfoundry.community.servicebroker.datalifecycle.controller;
public class SanitizeControllerTest {
private MockMvc mockMvc;
private String script = "drop * from table";
private String location = "/api/sanitizescript";
@InjectMocks
SanitizeController sanitizeController;
@Mock | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeController.java
// @RestController
// class SanitizeController {
//
// @Autowired
// private DataProviderService dataService;
//
// private static final String location = "/api/sanitizescript";
//
// @RequestMapping(value = location, method = RequestMethod.GET)
// public ResponseEntity<JSONObject> getSanitizeScript() {
// String script = dataService.getScript();
// JSONObject response = new JSONObject();
// if (null != script) {
//
// response.put("script", script);
// }
// return new ResponseEntity<JSONObject>(response, HttpStatus.OK);
// }
//
// @RequestMapping(value = location, method = RequestMethod.POST, produces = "application/json")
// public ResponseEntity<String> addSanitizeScript(@RequestBody Map<String, Object> script) {
//
// dataService.saveScript((String) script.get("script"));
// String response = "{}";
//
// HttpHeaders headers = new HttpHeaders();
// UriComponents components = UriComponentsBuilder.fromPath(location)
// .buildAndExpand();
//
// headers.setLocation(components.toUri());
// return new ResponseEntity<String>(response, headers, HttpStatus.CREATED);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/DataProviderService.java
// @Service
// public class DataProviderService {
//
// private ScriptRepo scriptRepo;
//
// @Autowired
// public DataProviderService(ScriptRepo scriptRepo) {
// this.scriptRepo = scriptRepo;
// }
//
// public void saveScript(String script) {
// scriptRepo.save(new SanitizationScript(script));
// }
//
// /**
// * Retrieve the sanitization script from the repo
// *
// * @return the script if one has been set, null otherwise.
// */
// public String getScript() {
// SanitizationScript result = scriptRepo.findOne(SanitizationScript.ID);
//
// return result == null ? null : result.getScript();
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/controller/SanitizeControllerTest.java
import static org.hamcrest.Matchers.is;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.get;
import static org.springframework.test.web.servlet.request.MockMvcRequestBuilders.post;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.content;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.header;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.jsonPath;
import static org.springframework.test.web.servlet.result.MockMvcResultMatchers.status;
import net.minidev.json.JSONObject;
import org.cloudfoundry.community.servicebroker.datalifecycle.controller.SanitizeController;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.DataProviderService;
import org.junit.Before;
import org.junit.Test;
import org.mockito.InjectMocks;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.springframework.http.MediaType;
import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
import org.springframework.test.web.servlet.MockMvc;
import org.springframework.test.web.servlet.setup.MockMvcBuilders;
package org.cloudfoundry.community.servicebroker.datalifecycle.controller;
public class SanitizeControllerTest {
private MockMvc mockMvc;
private String script = "drop * from table";
private String location = "/api/sanitizescript";
@InjectMocks
SanitizeController sanitizeController;
@Mock | DataProviderService service; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePairTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePair.java
// public class InstancePair {
//
// private String sourceInstance;
// private String copyInstance;
//
// public InstancePair(String sourceInstance, String copyInstance) {
// this.sourceInstance = sourceInstance;
// this.copyInstance = copyInstance;
// }
//
// public String getSource() {
// return sourceInstance;
// }
//
// public String getCopy() {
// return copyInstance;
// }
//
// @Override
// public boolean equals(Object lhs) {
// return lhs instanceof InstancePair && this.hashCode() == lhs.hashCode();
// }
//
// @Override
// public int hashCode() {
// return sourceInstance.hashCode() + copyInstance.hashCode();
// }
// }
| import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.not;
import static org.junit.Assert.assertThat;
import org.cloudfoundry.community.servicebroker.datalifecycle.dto.InstancePair;
import org.junit.Test; | package org.cloudfoundry.community.servicebroker.datalifecycle.dto;
public class InstancePairTest {
@Test
public void theyAreEqual() { | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePair.java
// public class InstancePair {
//
// private String sourceInstance;
// private String copyInstance;
//
// public InstancePair(String sourceInstance, String copyInstance) {
// this.sourceInstance = sourceInstance;
// this.copyInstance = copyInstance;
// }
//
// public String getSource() {
// return sourceInstance;
// }
//
// public String getCopy() {
// return copyInstance;
// }
//
// @Override
// public boolean equals(Object lhs) {
// return lhs instanceof InstancePair && this.hashCode() == lhs.hashCode();
// }
//
// @Override
// public int hashCode() {
// return sourceInstance.hashCode() + copyInstance.hashCode();
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/dto/InstancePairTest.java
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.not;
import static org.junit.Assert.assertThat;
import org.cloudfoundry.community.servicebroker.datalifecycle.dto.InstancePair;
import org.junit.Test;
package org.cloudfoundry.community.servicebroker.datalifecycle.dto;
public class InstancePairTest {
@Test
public void theyAreEqual() { | assertThat(new InstancePair("source", "copy"), |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/ServiceInstanceBindingManagerTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
| import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.is;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.HashMap;
import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.junit.Before;
import org.junit.Test;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class ServiceInstanceBindingManagerTest {
@Mock | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/ServiceInstanceBindingManagerTest.java
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.is;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.HashMap;
import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.junit.Before;
import org.junit.Test;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class ServiceInstanceBindingManagerTest {
@Mock | BindingRepository repo; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/ServiceInstanceBindingManagerTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
| import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.is;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.HashMap;
import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.junit.Before;
import org.junit.Test;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class ServiceInstanceBindingManagerTest {
@Mock
BindingRepository repo;
| // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/ServiceInstanceBindingManagerTest.java
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.is;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.HashMap;
import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.junit.Before;
import org.junit.Test;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class ServiceInstanceBindingManagerTest {
@Mock
BindingRepository repo;
| private LCServiceInstanceBindingManager bindingManager; |
krujos/data-lifecycle-service-broker | src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/ServiceInstanceBindingManagerTest.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
| import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.is;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.HashMap;
import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.junit.Before;
import org.junit.Test;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class ServiceInstanceBindingManagerTest {
@Mock
BindingRepository repo;
private LCServiceInstanceBindingManager bindingManager;
private Map<String, Object> creds = new HashMap<String, Object>();
private ServiceInstanceBinding binding = new ServiceInstanceBinding("binding-id",
"service-instance-id", creds, "syslog-drain", "app-guid");
| // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
// public class LCServiceInstanceBindingManager {
//
// @Autowired
// private BindingRepository repo;
//
// public LCServiceInstanceBindingManager(BindingRepository repo) {
// this.repo = repo;
// }
//
// public Collection<ServiceInstanceBinding> getBindings() {
// Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
// repo.findAll().forEach(t -> bindings.add(convert(t)));
// return bindings;
// }
//
// public ServiceInstanceBinding getBinding(String bindingId) {
// return convert(repo.findOne(bindingId));
// }
//
// public ServiceInstanceBinding removeBinding(String bindingId) {
// BindingEntity binding = repo.findOne(bindingId);
// if (null != binding) {
// repo.delete(bindingId);
// }
// return convert(binding);
// }
//
// public void saveBinding(ServiceInstanceBinding binding) {
// repo.save(new BindingEntity(binding));
// }
//
// private ServiceInstanceBinding convert(BindingEntity binding) {
// return null == binding ? null : new ServiceInstanceBinding(
// binding.getBindingId(), binding.getServiceInstanceId(), null,
// binding.getDrainUrl(), binding.getAppGuid());
// }
// }
// Path: src/test/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/ServiceInstanceBindingManagerTest.java
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.is;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.HashMap;
import java.util.Map;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.datalifecycle.service.LCServiceInstanceBindingManager;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.junit.Before;
import org.junit.Test;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class ServiceInstanceBindingManagerTest {
@Mock
BindingRepository repo;
private LCServiceInstanceBindingManager bindingManager;
private Map<String, Object> creds = new HashMap<String, Object>();
private ServiceInstanceBinding binding = new ServiceInstanceBinding("binding-id",
"service-instance-id", creds, "syslog-drain", "app-guid");
| private BindingEntity bindingEntity = new BindingEntity(binding); |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/HostUtilsConfig.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/utils/HostUtils.java
// public class HostUtils {
// private Logger logger = Logger.getLogger(HostUtils.class);
//
// public boolean waitForBoot(String ip, int port)
// throws ServiceBrokerException {
//
// logger.info("Waiting for " + ip + " to boot.");
// for (int i = 8; i > 0; --i) {
// try {
// try {
// Thread.sleep(20000);
// } catch (InterruptedException e1) {
// throw new ServiceBrokerException(
// "Internal Error! Something went wrong sleeping the threads!");
// }
// logger.info("Attempting to connect to " + ip + " on port "
// + port);
// Socket socket = new Socket();
// SocketAddress addr = new InetSocketAddress(
// Inet4Address.getByName(ip), port);
// socket.connect(addr, 10000);
// boolean connected = socket.isConnected();
// socket.close();
// if (connected) {
// logger.info(ip + "is responding on " + port);
// return true;
// }
// } catch (IOException e) {
// logger.error(ip + " is not responding on " + port + " " + i
// + " retires remaning.");
// }
// }
//
// return false;
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.utils.HostUtils;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
public class HostUtilsConfig {
@Bean | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/utils/HostUtils.java
// public class HostUtils {
// private Logger logger = Logger.getLogger(HostUtils.class);
//
// public boolean waitForBoot(String ip, int port)
// throws ServiceBrokerException {
//
// logger.info("Waiting for " + ip + " to boot.");
// for (int i = 8; i > 0; --i) {
// try {
// try {
// Thread.sleep(20000);
// } catch (InterruptedException e1) {
// throw new ServiceBrokerException(
// "Internal Error! Something went wrong sleeping the threads!");
// }
// logger.info("Attempting to connect to " + ip + " on port "
// + port);
// Socket socket = new Socket();
// SocketAddress addr = new InetSocketAddress(
// Inet4Address.getByName(ip), port);
// socket.connect(addr, 10000);
// boolean connected = socket.isConnected();
// socket.close();
// if (connected) {
// logger.info(ip + "is responding on " + port);
// return true;
// }
// } catch (IOException e) {
// logger.error(ip + " is not responding on " + port + " " + i
// + " retires remaning.");
// }
// }
//
// return false;
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/HostUtilsConfig.java
import org.cloudfoundry.community.servicebroker.datalifecycle.utils.HostUtils;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
public class HostUtilsConfig {
@Bean | public HostUtils newHostUtils() { |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/postgres/PostgresDataProvider.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/exception/DataProviderSanitizationFailedException.java
// public class DataProviderSanitizationFailedException extends Exception {
//
// private static final long serialVersionUID = 1L;
//
// public DataProviderSanitizationFailedException(String msg) {
// super(msg);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/DataProvider.java
// public interface DataProvider {
//
// /**
// * Sanitize the data source with the incoming script. This method is called
// * upon provision and typically removes or modifies sensitive data from the
// * database. This method is always called in order to ensure the sanitize
// * point has a chance to perform operations which my not be scripted.
// *
// * Creds are obtained from the CopyProvider after creating a copy, so the
// * DataProvider needs to understand the object, as it's opaque to the
// * framework.
// *
// * @param script
// * to run against the data source, may be null
// * @param creds
// * to login to service instance, provided by the CopyProvider
// * @throws DataProviderSanitizationFailedException
// * if the script fails.
// */
// void sanitize(String script, Map<String, Object> creds)
// throws DataProviderSanitizationFailedException;
//
// //TODO Password change is implicit in above, explicit api?
// }
| import java.sql.SQLException;
import java.util.Map;
import org.apache.log4j.Logger;
import org.cloudfoundry.community.servicebroker.datalifecycle.exception.DataProviderSanitizationFailedException;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.DataProvider; | package org.cloudfoundry.community.servicebroker.datalifecycle.postgres;
/**
* Created by jkruck on 4/20/15.
*/
public class PostgresDataProvider implements DataProvider {
private Logger log = Logger.getLogger(PostgresDataProvider.class);
private PostgresScriptExecutor executor;
public PostgresDataProvider(PostgresScriptExecutor executor) {
this.executor = executor;
}
@Override
public void sanitize(String script, Map<String, Object> creds) | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/exception/DataProviderSanitizationFailedException.java
// public class DataProviderSanitizationFailedException extends Exception {
//
// private static final long serialVersionUID = 1L;
//
// public DataProviderSanitizationFailedException(String msg) {
// super(msg);
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/DataProvider.java
// public interface DataProvider {
//
// /**
// * Sanitize the data source with the incoming script. This method is called
// * upon provision and typically removes or modifies sensitive data from the
// * database. This method is always called in order to ensure the sanitize
// * point has a chance to perform operations which my not be scripted.
// *
// * Creds are obtained from the CopyProvider after creating a copy, so the
// * DataProvider needs to understand the object, as it's opaque to the
// * framework.
// *
// * @param script
// * to run against the data source, may be null
// * @param creds
// * to login to service instance, provided by the CopyProvider
// * @throws DataProviderSanitizationFailedException
// * if the script fails.
// */
// void sanitize(String script, Map<String, Object> creds)
// throws DataProviderSanitizationFailedException;
//
// //TODO Password change is implicit in above, explicit api?
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/postgres/PostgresDataProvider.java
import java.sql.SQLException;
import java.util.Map;
import org.apache.log4j.Logger;
import org.cloudfoundry.community.servicebroker.datalifecycle.exception.DataProviderSanitizationFailedException;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.DataProvider;
package org.cloudfoundry.community.servicebroker.datalifecycle.postgres;
/**
* Created by jkruck on 4/20/15.
*/
public class PostgresDataProvider implements DataProvider {
private Logger log = Logger.getLogger(PostgresDataProvider.class);
private PostgresScriptExecutor executor;
public PostgresDataProvider(PostgresScriptExecutor executor) {
this.executor = executor;
}
@Override
public void sanitize(String script, Map<String, Object> creds) | throws DataProviderSanitizationFailedException { |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
| import java.util.ArrayList;
import java.util.Collection;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.springframework.beans.factory.annotation.Autowired; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class LCServiceInstanceBindingManager {
@Autowired | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
import java.util.ArrayList;
import java.util.Collection;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.springframework.beans.factory.annotation.Autowired;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class LCServiceInstanceBindingManager {
@Autowired | private BindingRepository repo; |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
| import java.util.ArrayList;
import java.util.Collection;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.springframework.beans.factory.annotation.Autowired; | package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class LCServiceInstanceBindingManager {
@Autowired
private BindingRepository repo;
public LCServiceInstanceBindingManager(BindingRepository repo) {
this.repo = repo;
}
public Collection<ServiceInstanceBinding> getBindings() {
Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
repo.findAll().forEach(t -> bindings.add(convert(t)));
return bindings;
}
public ServiceInstanceBinding getBinding(String bindingId) {
return convert(repo.findOne(bindingId));
}
public ServiceInstanceBinding removeBinding(String bindingId) { | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/model/BindingEntity.java
// @Entity
// public class BindingEntity {
//
// @Id
// private String id;
// private String appGuid;
// private String bindingId;
// private String serviceInstanceId;
// private String drainUrl;
//
// public BindingEntity() {
// }
//
// public BindingEntity(ServiceInstanceBinding binding) {
// setAppGuid(binding.getAppGuid());
// setBindingId(binding.getId());
// setServiceInstanceId(binding.getServiceInstanceId());
// setDrainUrl(binding.getSyslogDrainUrl());
// this.setId(binding.getId());
// }
//
// public String getAppGuid() {
// return appGuid;
// }
//
// private void setAppGuid(String appGuid) {
// this.appGuid = appGuid;
// }
//
// public String getBindingId() {
// return bindingId;
// }
//
// private void setBindingId(String bindingId) {
// this.bindingId = bindingId;
// }
//
// public String getServiceInstanceId() {
// return serviceInstanceId;
// }
//
// private void setServiceInstanceId(String serviceInstanceId) {
// this.serviceInstanceId = serviceInstanceId;
// }
//
// public String getDrainUrl() {
// return drainUrl;
// }
//
// private void setDrainUrl(String drainUrl) {
// this.drainUrl = drainUrl;
// }
//
// public String getId() {
// return id;
// }
//
// private void setId(String id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/repo/BindingRepository.java
// @RepositoryRestResource(collectionResourceRel = "bindings", path = "bindings")
// public interface BindingRepository extends
// PagingAndSortingRepository<BindingEntity, String> {
//
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/service/LCServiceInstanceBindingManager.java
import java.util.ArrayList;
import java.util.Collection;
import org.cloudfoundry.community.servicebroker.datalifecycle.model.BindingEntity;
import org.cloudfoundry.community.servicebroker.datalifecycle.repo.BindingRepository;
import org.cloudfoundry.community.servicebroker.model.ServiceInstanceBinding;
import org.springframework.beans.factory.annotation.Autowired;
package org.cloudfoundry.community.servicebroker.datalifecycle.service;
public class LCServiceInstanceBindingManager {
@Autowired
private BindingRepository repo;
public LCServiceInstanceBindingManager(BindingRepository repo) {
this.repo = repo;
}
public Collection<ServiceInstanceBinding> getBindings() {
Collection<ServiceInstanceBinding> bindings = new ArrayList<ServiceInstanceBinding>();
repo.findAll().forEach(t -> bindings.add(convert(t)));
return bindings;
}
public ServiceInstanceBinding getBinding(String bindingId) {
return convert(repo.findOne(bindingId));
}
public ServiceInstanceBinding removeBinding(String bindingId) { | BindingEntity binding = repo.findOne(bindingId); |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/AWSCopyProviderConfig.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/utils/HostUtils.java
// public class HostUtils {
// private Logger logger = Logger.getLogger(HostUtils.class);
//
// public boolean waitForBoot(String ip, int port)
// throws ServiceBrokerException {
//
// logger.info("Waiting for " + ip + " to boot.");
// for (int i = 8; i > 0; --i) {
// try {
// try {
// Thread.sleep(20000);
// } catch (InterruptedException e1) {
// throw new ServiceBrokerException(
// "Internal Error! Something went wrong sleeping the threads!");
// }
// logger.info("Attempting to connect to " + ip + " on port "
// + port);
// Socket socket = new Socket();
// SocketAddress addr = new InetSocketAddress(
// Inet4Address.getByName(ip), port);
// socket.connect(addr, 10000);
// boolean connected = socket.isConnected();
// socket.close();
// if (connected) {
// logger.info(ip + "is responding on " + port);
// return true;
// }
// } catch (IOException e) {
// logger.error(ip + " is not responding on " + port + " " + i
// + " retires remaning.");
// }
// }
//
// return false;
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSCopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSHelper;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.utils.HostUtils;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import com.amazonaws.services.ec2.AmazonEC2Client; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class AWSCopyProviderConfig {
@Value("#{environment.PROD_DB_USER}")
private String username;
@Value("#{environment.PROD_DB_PASSWORD}")
private String password;
@Value("#{environment.PROD_DB_URI}")
private String uri;
@Value("#{environment.SOURCE_INSTANCE_ID}")
private String sourceInstance;
@Value("#{environment.SUBNET_ID}")
private String subnetId;
@Autowired
private AmazonEC2Client ec2Client;
@Autowired | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/utils/HostUtils.java
// public class HostUtils {
// private Logger logger = Logger.getLogger(HostUtils.class);
//
// public boolean waitForBoot(String ip, int port)
// throws ServiceBrokerException {
//
// logger.info("Waiting for " + ip + " to boot.");
// for (int i = 8; i > 0; --i) {
// try {
// try {
// Thread.sleep(20000);
// } catch (InterruptedException e1) {
// throw new ServiceBrokerException(
// "Internal Error! Something went wrong sleeping the threads!");
// }
// logger.info("Attempting to connect to " + ip + " on port "
// + port);
// Socket socket = new Socket();
// SocketAddress addr = new InetSocketAddress(
// Inet4Address.getByName(ip), port);
// socket.connect(addr, 10000);
// boolean connected = socket.isConnected();
// socket.close();
// if (connected) {
// logger.info(ip + "is responding on " + port);
// return true;
// }
// } catch (IOException e) {
// logger.error(ip + " is not responding on " + port + " " + i
// + " retires remaning.");
// }
// }
//
// return false;
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/AWSCopyProviderConfig.java
import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSCopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSHelper;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.utils.HostUtils;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import com.amazonaws.services.ec2.AmazonEC2Client;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class AWSCopyProviderConfig {
@Value("#{environment.PROD_DB_USER}")
private String username;
@Value("#{environment.PROD_DB_PASSWORD}")
private String password;
@Value("#{environment.PROD_DB_URI}")
private String uri;
@Value("#{environment.SOURCE_INSTANCE_ID}")
private String sourceInstance;
@Value("#{environment.SUBNET_ID}")
private String subnetId;
@Autowired
private AmazonEC2Client ec2Client;
@Autowired | private HostUtils hostUtils; |
krujos/data-lifecycle-service-broker | src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/AWSCopyProviderConfig.java | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/utils/HostUtils.java
// public class HostUtils {
// private Logger logger = Logger.getLogger(HostUtils.class);
//
// public boolean waitForBoot(String ip, int port)
// throws ServiceBrokerException {
//
// logger.info("Waiting for " + ip + " to boot.");
// for (int i = 8; i > 0; --i) {
// try {
// try {
// Thread.sleep(20000);
// } catch (InterruptedException e1) {
// throw new ServiceBrokerException(
// "Internal Error! Something went wrong sleeping the threads!");
// }
// logger.info("Attempting to connect to " + ip + " on port "
// + port);
// Socket socket = new Socket();
// SocketAddress addr = new InetSocketAddress(
// Inet4Address.getByName(ip), port);
// socket.connect(addr, 10000);
// boolean connected = socket.isConnected();
// socket.close();
// if (connected) {
// logger.info(ip + "is responding on " + port);
// return true;
// }
// } catch (IOException e) {
// logger.error(ip + " is not responding on " + port + " " + i
// + " retires remaning.");
// }
// }
//
// return false;
// }
// }
| import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSCopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSHelper;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.utils.HostUtils;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import com.amazonaws.services.ec2.AmazonEC2Client; | package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class AWSCopyProviderConfig {
@Value("#{environment.PROD_DB_USER}")
private String username;
@Value("#{environment.PROD_DB_PASSWORD}")
private String password;
@Value("#{environment.PROD_DB_URI}")
private String uri;
@Value("#{environment.SOURCE_INSTANCE_ID}")
private String sourceInstance;
@Value("#{environment.SUBNET_ID}")
private String subnetId;
@Autowired
private AmazonEC2Client ec2Client;
@Autowired
private HostUtils hostUtils;
@Value("#{environment.BOOT_CHECK_PORT}")
private int bootCheckPort;
@Bean | // Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/provider/CopyProvider.java
// public interface CopyProvider {
//
// /**
// * Create a copy of the source instance. The implementer should inject that
// * through an environment variable or other means. Upon the copy will be
// * launched and accessible to clients.
// *
// * @param instanceId
// * to create a copy of
// * @return the id of the new copy.
// * @throws ServiceBrokerException
// * on error
// */
// String createCopy(String instanceId)
// throws ServiceBrokerException;
//
// /**
// * Remove a copy from the iaas. The expectation is that all artifacts
// * associated with the copy (snapshots, ami's etc) are cleaned up
// *
// * @param instance
// * to delete
// * @throws ServiceBrokerException
// * on error
// */
// void deleteCopy(final String instance)
// throws ServiceBrokerException;
//
// /**
// * Return the creds hash associated with service brokers. Should contain a
// * URI, username, password or whatever makes sense for your service. Will be
// * injected into your app.
// */
// Map<String, Object> getCreds(final String instance)
// throws ServiceBrokerException;
// }
//
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/utils/HostUtils.java
// public class HostUtils {
// private Logger logger = Logger.getLogger(HostUtils.class);
//
// public boolean waitForBoot(String ip, int port)
// throws ServiceBrokerException {
//
// logger.info("Waiting for " + ip + " to boot.");
// for (int i = 8; i > 0; --i) {
// try {
// try {
// Thread.sleep(20000);
// } catch (InterruptedException e1) {
// throw new ServiceBrokerException(
// "Internal Error! Something went wrong sleeping the threads!");
// }
// logger.info("Attempting to connect to " + ip + " on port "
// + port);
// Socket socket = new Socket();
// SocketAddress addr = new InetSocketAddress(
// Inet4Address.getByName(ip), port);
// socket.connect(addr, 10000);
// boolean connected = socket.isConnected();
// socket.close();
// if (connected) {
// logger.info(ip + "is responding on " + port);
// return true;
// }
// } catch (IOException e) {
// logger.error(ip + " is not responding on " + port + " " + i
// + " retires remaning.");
// }
// }
//
// return false;
// }
// }
// Path: src/main/java/org/cloudfoundry/community/servicebroker/datalifecycle/config/AWSCopyProviderConfig.java
import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSCopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.aws.AWSHelper;
import org.cloudfoundry.community.servicebroker.datalifecycle.provider.CopyProvider;
import org.cloudfoundry.community.servicebroker.datalifecycle.utils.HostUtils;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import com.amazonaws.services.ec2.AmazonEC2Client;
package org.cloudfoundry.community.servicebroker.datalifecycle.config;
@Configuration
class AWSCopyProviderConfig {
@Value("#{environment.PROD_DB_USER}")
private String username;
@Value("#{environment.PROD_DB_PASSWORD}")
private String password;
@Value("#{environment.PROD_DB_URI}")
private String uri;
@Value("#{environment.SOURCE_INSTANCE_ID}")
private String sourceInstance;
@Value("#{environment.SUBNET_ID}")
private String subnetId;
@Autowired
private AmazonEC2Client ec2Client;
@Autowired
private HostUtils hostUtils;
@Value("#{environment.BOOT_CHECK_PORT}")
private int bootCheckPort;
@Bean | CopyProvider copyProvider() { |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/currentUser/CurrentUserDetailsService.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
| import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.CurrentUser;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.security.core.userdetails.UserDetails;
import org.springframework.security.core.userdetails.UserDetailsService;
import org.springframework.security.core.userdetails.UsernameNotFoundException;
import org.springframework.stereotype.Service; | package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
@Service
public class CurrentUserDetailsService implements UserDetailsService {
| // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
// Path: src/main/java/org/myazure/weixin/service/currentUser/CurrentUserDetailsService.java
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.CurrentUser;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.security.core.userdetails.UserDetails;
import org.springframework.security.core.userdetails.UserDetailsService;
import org.springframework.security.core.userdetails.UsernameNotFoundException;
import org.springframework.stereotype.Service;
package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
@Service
public class CurrentUserDetailsService implements UserDetailsService {
| private final MaUserService userService; |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/currentUser/CurrentUserDetailsService.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
| import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.CurrentUser;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.security.core.userdetails.UserDetails;
import org.springframework.security.core.userdetails.UserDetailsService;
import org.springframework.security.core.userdetails.UsernameNotFoundException;
import org.springframework.stereotype.Service; | package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
@Service
public class CurrentUserDetailsService implements UserDetailsService {
private final MaUserService userService;
@Autowired
public CurrentUserDetailsService(MaUserService userService) {
this.userService = userService;
}
@Override
public UserDetails loadUserByUsername(String name) throws UsernameNotFoundException { | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
// Path: src/main/java/org/myazure/weixin/service/currentUser/CurrentUserDetailsService.java
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.CurrentUser;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.security.core.userdetails.UserDetails;
import org.springframework.security.core.userdetails.UserDetailsService;
import org.springframework.security.core.userdetails.UsernameNotFoundException;
import org.springframework.stereotype.Service;
package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
@Service
public class CurrentUserDetailsService implements UserDetailsService {
private final MaUserService userService;
@Autowired
public CurrentUserDetailsService(MaUserService userService) {
this.userService = userService;
}
@Override
public UserDetails loadUserByUsername(String name) throws UsernameNotFoundException { | MaUser user = userService.getMaUserByName(name); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/currentUser/CurrentUserDetailsService.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
| import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.CurrentUser;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.security.core.userdetails.UserDetails;
import org.springframework.security.core.userdetails.UserDetailsService;
import org.springframework.security.core.userdetails.UsernameNotFoundException;
import org.springframework.stereotype.Service; | package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
@Service
public class CurrentUserDetailsService implements UserDetailsService {
private final MaUserService userService;
@Autowired
public CurrentUserDetailsService(MaUserService userService) {
this.userService = userService;
}
@Override
public UserDetails loadUserByUsername(String name) throws UsernameNotFoundException {
MaUser user = userService.getMaUserByName(name);
if(user == null) {
throw new UsernameNotFoundException(name + " not found");
} | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
// Path: src/main/java/org/myazure/weixin/service/currentUser/CurrentUserDetailsService.java
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.CurrentUser;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.security.core.userdetails.UserDetails;
import org.springframework.security.core.userdetails.UserDetailsService;
import org.springframework.security.core.userdetails.UsernameNotFoundException;
import org.springframework.stereotype.Service;
package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
@Service
public class CurrentUserDetailsService implements UserDetailsService {
private final MaUserService userService;
@Autowired
public CurrentUserDetailsService(MaUserService userService) {
this.userService = userService;
}
@Override
public UserDetails loadUserByUsername(String name) throws UsernameNotFoundException {
MaUser user = userService.getMaUserByName(name);
if(user == null) {
throw new UsernameNotFoundException(name + " not found");
} | return new CurrentUser(user); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/controller/UserController.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java
// @Component
// public class MaUserFormValidator implements Validator {
//
// private final MaUserService userService;
//
// @Autowired
// public MaUserFormValidator(MaUserService userService) {
// this.userService = userService;
// }
//
// @Override
// public boolean supports(Class<?> clazz) {
// return clazz.equals(MaUserEntity.class);
// }
//
// @Override
// public void validate(Object target, Errors errors) {
// MaUserEntity form = (MaUserEntity) target;
// validatePasswords(errors, form);
// validateName(errors, form);
// }
//
// private void validatePasswords(Errors errors, MaUserEntity form) {
// if (!form.getPassword().equals(form.getPasswordRepeated())) {
// errors.rejectValue("password", "password", "Passwords do not match");
// }
// }
//
// private void validateName(Errors errors, MaUserEntity form) {
// if (userService.getMaUserByName(form.getUserName()) != null) {
// errors.rejectValue("userName", "userName", "User with this name already exists");
// }
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
| import java.util.List;
import java.util.NoSuchElementException;
import javax.validation.Valid;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.domain.validator.MaUserFormValidator;
import org.myazure.weixin.service.MaUserService;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.dao.DataIntegrityViolationException;
import org.springframework.security.access.prepost.PreAuthorize;
import org.springframework.stereotype.Controller;
import org.springframework.validation.BindingResult;
import org.springframework.web.bind.WebDataBinder;
import org.springframework.web.bind.annotation.InitBinder;
import org.springframework.web.bind.annotation.ModelAttribute;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestMethod;
import org.springframework.web.bind.annotation.RequestParam;
import org.springframework.web.servlet.ModelAndView; | package org.myazure.weixin.controller;
/**
*
* @author WangZhen
*
*/
@Controller
public class UserController {
private static final Logger LOGGER = LoggerFactory.getLogger(UserController.class); | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java
// @Component
// public class MaUserFormValidator implements Validator {
//
// private final MaUserService userService;
//
// @Autowired
// public MaUserFormValidator(MaUserService userService) {
// this.userService = userService;
// }
//
// @Override
// public boolean supports(Class<?> clazz) {
// return clazz.equals(MaUserEntity.class);
// }
//
// @Override
// public void validate(Object target, Errors errors) {
// MaUserEntity form = (MaUserEntity) target;
// validatePasswords(errors, form);
// validateName(errors, form);
// }
//
// private void validatePasswords(Errors errors, MaUserEntity form) {
// if (!form.getPassword().equals(form.getPasswordRepeated())) {
// errors.rejectValue("password", "password", "Passwords do not match");
// }
// }
//
// private void validateName(Errors errors, MaUserEntity form) {
// if (userService.getMaUserByName(form.getUserName()) != null) {
// errors.rejectValue("userName", "userName", "User with this name already exists");
// }
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
// Path: src/main/java/org/myazure/weixin/controller/UserController.java
import java.util.List;
import java.util.NoSuchElementException;
import javax.validation.Valid;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.domain.validator.MaUserFormValidator;
import org.myazure.weixin.service.MaUserService;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.dao.DataIntegrityViolationException;
import org.springframework.security.access.prepost.PreAuthorize;
import org.springframework.stereotype.Controller;
import org.springframework.validation.BindingResult;
import org.springframework.web.bind.WebDataBinder;
import org.springframework.web.bind.annotation.InitBinder;
import org.springframework.web.bind.annotation.ModelAttribute;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestMethod;
import org.springframework.web.bind.annotation.RequestParam;
import org.springframework.web.servlet.ModelAndView;
package org.myazure.weixin.controller;
/**
*
* @author WangZhen
*
*/
@Controller
public class UserController {
private static final Logger LOGGER = LoggerFactory.getLogger(UserController.class); | private final MaUserService userService; |
Myazure/weixin_component | src/main/java/org/myazure/weixin/controller/UserController.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java
// @Component
// public class MaUserFormValidator implements Validator {
//
// private final MaUserService userService;
//
// @Autowired
// public MaUserFormValidator(MaUserService userService) {
// this.userService = userService;
// }
//
// @Override
// public boolean supports(Class<?> clazz) {
// return clazz.equals(MaUserEntity.class);
// }
//
// @Override
// public void validate(Object target, Errors errors) {
// MaUserEntity form = (MaUserEntity) target;
// validatePasswords(errors, form);
// validateName(errors, form);
// }
//
// private void validatePasswords(Errors errors, MaUserEntity form) {
// if (!form.getPassword().equals(form.getPasswordRepeated())) {
// errors.rejectValue("password", "password", "Passwords do not match");
// }
// }
//
// private void validateName(Errors errors, MaUserEntity form) {
// if (userService.getMaUserByName(form.getUserName()) != null) {
// errors.rejectValue("userName", "userName", "User with this name already exists");
// }
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
| import java.util.List;
import java.util.NoSuchElementException;
import javax.validation.Valid;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.domain.validator.MaUserFormValidator;
import org.myazure.weixin.service.MaUserService;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.dao.DataIntegrityViolationException;
import org.springframework.security.access.prepost.PreAuthorize;
import org.springframework.stereotype.Controller;
import org.springframework.validation.BindingResult;
import org.springframework.web.bind.WebDataBinder;
import org.springframework.web.bind.annotation.InitBinder;
import org.springframework.web.bind.annotation.ModelAttribute;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestMethod;
import org.springframework.web.bind.annotation.RequestParam;
import org.springframework.web.servlet.ModelAndView; | package org.myazure.weixin.controller;
/**
*
* @author WangZhen
*
*/
@Controller
public class UserController {
private static final Logger LOGGER = LoggerFactory.getLogger(UserController.class);
private final MaUserService userService; | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java
// @Component
// public class MaUserFormValidator implements Validator {
//
// private final MaUserService userService;
//
// @Autowired
// public MaUserFormValidator(MaUserService userService) {
// this.userService = userService;
// }
//
// @Override
// public boolean supports(Class<?> clazz) {
// return clazz.equals(MaUserEntity.class);
// }
//
// @Override
// public void validate(Object target, Errors errors) {
// MaUserEntity form = (MaUserEntity) target;
// validatePasswords(errors, form);
// validateName(errors, form);
// }
//
// private void validatePasswords(Errors errors, MaUserEntity form) {
// if (!form.getPassword().equals(form.getPasswordRepeated())) {
// errors.rejectValue("password", "password", "Passwords do not match");
// }
// }
//
// private void validateName(Errors errors, MaUserEntity form) {
// if (userService.getMaUserByName(form.getUserName()) != null) {
// errors.rejectValue("userName", "userName", "User with this name already exists");
// }
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
// Path: src/main/java/org/myazure/weixin/controller/UserController.java
import java.util.List;
import java.util.NoSuchElementException;
import javax.validation.Valid;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.domain.validator.MaUserFormValidator;
import org.myazure.weixin.service.MaUserService;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.dao.DataIntegrityViolationException;
import org.springframework.security.access.prepost.PreAuthorize;
import org.springframework.stereotype.Controller;
import org.springframework.validation.BindingResult;
import org.springframework.web.bind.WebDataBinder;
import org.springframework.web.bind.annotation.InitBinder;
import org.springframework.web.bind.annotation.ModelAttribute;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestMethod;
import org.springframework.web.bind.annotation.RequestParam;
import org.springframework.web.servlet.ModelAndView;
package org.myazure.weixin.controller;
/**
*
* @author WangZhen
*
*/
@Controller
public class UserController {
private static final Logger LOGGER = LoggerFactory.getLogger(UserController.class);
private final MaUserService userService; | private final MaUserFormValidator userCreateFormValidator; |
Myazure/weixin_component | src/main/java/org/myazure/weixin/handlers/VerifyTicketHandler.java | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
| import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.data.redis.core.StringRedisTemplate;
import weixin.popular.bean.component.ComponentReceiveXML; | package org.myazure.weixin.handlers;
/**
*
* @author WangZhen
*
*/
public class VerifyTicketHandler {
private static final Logger LOG = LoggerFactory.getLogger(VerifyTicketHandler.class);
@Autowired
private StringRedisTemplate redisTemplate;
@Autowired
private AuthorizeHandler authorizeHandler;
/**
* 刷新凭证
*
* @param eventMessage
*/
public void refreshVerifyTicket(ComponentReceiveXML eventMessage) {
// Update component verify ticket in memory | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
// Path: src/main/java/org/myazure/weixin/handlers/VerifyTicketHandler.java
import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.data.redis.core.StringRedisTemplate;
import weixin.popular.bean.component.ComponentReceiveXML;
package org.myazure.weixin.handlers;
/**
*
* @author WangZhen
*
*/
public class VerifyTicketHandler {
private static final Logger LOG = LoggerFactory.getLogger(VerifyTicketHandler.class);
@Autowired
private StringRedisTemplate redisTemplate;
@Autowired
private AuthorizeHandler authorizeHandler;
/**
* 刷新凭证
*
* @param eventMessage
*/
public void refreshVerifyTicket(ComponentReceiveXML eventMessage) {
// Update component verify ticket in memory | MyazureConstants.MYAZURE_COMPONENT_VERIFY_TICKET = eventMessage.getComponentVerifyTicket(); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/handlers/VerifyTicketHandler.java | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
| import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.data.redis.core.StringRedisTemplate;
import weixin.popular.bean.component.ComponentReceiveXML; | package org.myazure.weixin.handlers;
/**
*
* @author WangZhen
*
*/
public class VerifyTicketHandler {
private static final Logger LOG = LoggerFactory.getLogger(VerifyTicketHandler.class);
@Autowired
private StringRedisTemplate redisTemplate;
@Autowired
private AuthorizeHandler authorizeHandler;
/**
* 刷新凭证
*
* @param eventMessage
*/
public void refreshVerifyTicket(ComponentReceiveXML eventMessage) {
// Update component verify ticket in memory
MyazureConstants.MYAZURE_COMPONENT_VERIFY_TICKET = eventMessage.getComponentVerifyTicket();
// Refresh component access token
LOG.info("[Myazure Weixin]: Refresh component access token from redis."); | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
// Path: src/main/java/org/myazure/weixin/handlers/VerifyTicketHandler.java
import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.data.redis.core.StringRedisTemplate;
import weixin.popular.bean.component.ComponentReceiveXML;
package org.myazure.weixin.handlers;
/**
*
* @author WangZhen
*
*/
public class VerifyTicketHandler {
private static final Logger LOG = LoggerFactory.getLogger(VerifyTicketHandler.class);
@Autowired
private StringRedisTemplate redisTemplate;
@Autowired
private AuthorizeHandler authorizeHandler;
/**
* 刷新凭证
*
* @param eventMessage
*/
public void refreshVerifyTicket(ComponentReceiveXML eventMessage) {
// Update component verify ticket in memory
MyazureConstants.MYAZURE_COMPONENT_VERIFY_TICKET = eventMessage.getComponentVerifyTicket();
// Refresh component access token
LOG.info("[Myazure Weixin]: Refresh component access token from redis."); | String accessToken = redisTemplate.opsForValue().get(WeixinConstans.COMPONENT_ACCESS_TOKEN_KEY); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/controller/CurrentUserControllerAdvice.java | // Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
| import org.myazure.weixin.domain.CurrentUser;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.security.core.Authentication;
import org.springframework.web.bind.annotation.ControllerAdvice;
import org.springframework.web.bind.annotation.ModelAttribute; | package org.myazure.weixin.controller;
/**
*
* @author WangZhen
*
*/
@ControllerAdvice
public class CurrentUserControllerAdvice {
private static final Logger LOGGER = LoggerFactory.getLogger(CurrentUserControllerAdvice.class);
@ModelAttribute("currentUser") | // Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
// Path: src/main/java/org/myazure/weixin/controller/CurrentUserControllerAdvice.java
import org.myazure.weixin.domain.CurrentUser;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.security.core.Authentication;
import org.springframework.web.bind.annotation.ControllerAdvice;
import org.springframework.web.bind.annotation.ModelAttribute;
package org.myazure.weixin.controller;
/**
*
* @author WangZhen
*
*/
@ControllerAdvice
public class CurrentUserControllerAdvice {
private static final Logger LOGGER = LoggerFactory.getLogger(CurrentUserControllerAdvice.class);
@ModelAttribute("currentUser") | public CurrentUser getCurrentUser(Authentication authentication) { |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/currentUser/CurrentUserServiceImpl.java | // Path: src/main/java/org/myazure/weixin/domain/MaRole.java
// public enum MaRole {
// USER, ADMIN
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
| import org.myazure.weixin.domain.MaRole;
import org.myazure.weixin.domain.CurrentUser; | package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
public class CurrentUserServiceImpl implements CurrentUserService {
@Override | // Path: src/main/java/org/myazure/weixin/domain/MaRole.java
// public enum MaRole {
// USER, ADMIN
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
// Path: src/main/java/org/myazure/weixin/service/currentUser/CurrentUserServiceImpl.java
import org.myazure.weixin.domain.MaRole;
import org.myazure.weixin.domain.CurrentUser;
package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
public class CurrentUserServiceImpl implements CurrentUserService {
@Override | public boolean canAccessUser(CurrentUser currentUser, Long userId) { |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/currentUser/CurrentUserServiceImpl.java | // Path: src/main/java/org/myazure/weixin/domain/MaRole.java
// public enum MaRole {
// USER, ADMIN
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
| import org.myazure.weixin.domain.MaRole;
import org.myazure.weixin.domain.CurrentUser; | package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
public class CurrentUserServiceImpl implements CurrentUserService {
@Override
public boolean canAccessUser(CurrentUser currentUser, Long userId) {
return currentUser != null | // Path: src/main/java/org/myazure/weixin/domain/MaRole.java
// public enum MaRole {
// USER, ADMIN
// }
//
// Path: src/main/java/org/myazure/weixin/domain/CurrentUser.java
// public class CurrentUser extends org.springframework.security.core.userdetails.User {
//
// /**
// *
// */
// private static final long serialVersionUID = 1L;
// private MaUser user;
//
// public CurrentUser(MaUser user) {
// super(user.getUserName(), user.getPassword(), AuthorityUtils.createAuthorityList(user.getRole().toString()));
// this.user = user;
// }
//
// public MaUser getUser() {
// return user;
// }
//
// public Long getId() {
// return user.getId();
// }
//
// public MaRole getRole() {
// return user.getRole();
// }
//
// @Override
// public String toString() {
// return "CurrentUser{" +
// "user=" + user +
// "} " + super.toString();
// }
// }
// Path: src/main/java/org/myazure/weixin/service/currentUser/CurrentUserServiceImpl.java
import org.myazure.weixin.domain.MaRole;
import org.myazure.weixin.domain.CurrentUser;
package org.myazure.weixin.service.currentUser;
/**
* @author WangZhen
*/
public class CurrentUserServiceImpl implements CurrentUserService {
@Override
public boolean canAccessUser(CurrentUser currentUser, Long userId) {
return currentUser != null | && (currentUser.getRole() == MaRole.ADMIN || currentUser.getId().equals(userId)); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/MaUserService.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
| import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity; | package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
public interface MaUserService {
MaUser getMaUserById(long id);
MaUser getMaUserByName(String name);
Collection<MaUser> getAllMaUsers();
| // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
public interface MaUserService {
MaUser getMaUserById(long id);
MaUser getMaUserByName(String name);
Collection<MaUser> getAllMaUsers();
| MaUser create(MaUserEntity form); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java | // Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
| import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Component;
import org.springframework.validation.Errors;
import org.springframework.validation.Validator; | package org.myazure.weixin.domain.validator;
/**
* @author WangZhen
*/
@Component
public class MaUserFormValidator implements Validator {
| // Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
// Path: src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Component;
import org.springframework.validation.Errors;
import org.springframework.validation.Validator;
package org.myazure.weixin.domain.validator;
/**
* @author WangZhen
*/
@Component
public class MaUserFormValidator implements Validator {
| private final MaUserService userService; |
Myazure/weixin_component | src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java | // Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
| import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Component;
import org.springframework.validation.Errors;
import org.springframework.validation.Validator; | package org.myazure.weixin.domain.validator;
/**
* @author WangZhen
*/
@Component
public class MaUserFormValidator implements Validator {
private final MaUserService userService;
@Autowired
public MaUserFormValidator(MaUserService userService) {
this.userService = userService;
}
@Override
public boolean supports(Class<?> clazz) { | // Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/service/MaUserService.java
// public interface MaUserService {
//
// MaUser getMaUserById(long id);
//
// MaUser getMaUserByName(String name);
//
// Collection<MaUser> getAllMaUsers();
//
// MaUser create(MaUserEntity form);
// }
// Path: src/main/java/org/myazure/weixin/domain/validator/MaUserFormValidator.java
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.service.MaUserService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Component;
import org.springframework.validation.Errors;
import org.springframework.validation.Validator;
package org.myazure.weixin.domain.validator;
/**
* @author WangZhen
*/
@Component
public class MaUserFormValidator implements Validator {
private final MaUserService userService;
@Autowired
public MaUserFormValidator(MaUserService userService) {
this.userService = userService;
}
@Override
public boolean supports(Class<?> clazz) { | return clazz.equals(MaUserEntity.class); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/lisenner/SystemInitListener.java | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
| import javax.servlet.ServletContextEvent;
import javax.servlet.ServletContextListener;
import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.data.redis.core.StringRedisTemplate;
import org.springframework.stereotype.Component;
import com.qq.weixin.mp.aes.AesException;
import com.qq.weixin.mp.aes.WXBizMsgCrypt;
import weixin.popular.api.API;
import weixin.popular.client.LocalHttpClient;
import weixin.popular.support.TokenManager; | package org.myazure.weixin.lisenner;
/**
* Token 监听器
*
* @author WangZhen
*
*/
@Component("servletContextListener")
public class SystemInitListener implements ServletContextListener {
private static final Logger LOG = LoggerFactory.getLogger(SystemInitListener.class);
@Value("${weixin.compAppId}")
protected String MYAZURE_APP_ID;
@Value("${weixin.compAppSecret}")
protected String MYAZURE_APP_SECRET;
@Value("${weixin.encode.token}")
protected String MYAZURE_ENCODE_TOKEN;
@Value("${weixin.encode.key}")
protected String MYAZURE_ENCODE_KEY;
@Value("${myazure.appUrl}")
protected String MYAZURE_APP_URL;
@Value("${myazure.serverId}")
protected String MYAZURE_SERVER_ID;
@Autowired
private StringRedisTemplate redisTemplate;
@Override
public void contextInitialized(ServletContextEvent sce) { | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
// Path: src/main/java/org/myazure/weixin/lisenner/SystemInitListener.java
import javax.servlet.ServletContextEvent;
import javax.servlet.ServletContextListener;
import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.data.redis.core.StringRedisTemplate;
import org.springframework.stereotype.Component;
import com.qq.weixin.mp.aes.AesException;
import com.qq.weixin.mp.aes.WXBizMsgCrypt;
import weixin.popular.api.API;
import weixin.popular.client.LocalHttpClient;
import weixin.popular.support.TokenManager;
package org.myazure.weixin.lisenner;
/**
* Token 监听器
*
* @author WangZhen
*
*/
@Component("servletContextListener")
public class SystemInitListener implements ServletContextListener {
private static final Logger LOG = LoggerFactory.getLogger(SystemInitListener.class);
@Value("${weixin.compAppId}")
protected String MYAZURE_APP_ID;
@Value("${weixin.compAppSecret}")
protected String MYAZURE_APP_SECRET;
@Value("${weixin.encode.token}")
protected String MYAZURE_ENCODE_TOKEN;
@Value("${weixin.encode.key}")
protected String MYAZURE_ENCODE_KEY;
@Value("${myazure.appUrl}")
protected String MYAZURE_APP_URL;
@Value("${myazure.serverId}")
protected String MYAZURE_SERVER_ID;
@Autowired
private StringRedisTemplate redisTemplate;
@Override
public void contextInitialized(ServletContextEvent sce) { | MyazureConstants.MYAZURE_APP_ID = MYAZURE_APP_ID; |
Myazure/weixin_component | src/main/java/org/myazure/weixin/lisenner/SystemInitListener.java | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
| import javax.servlet.ServletContextEvent;
import javax.servlet.ServletContextListener;
import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.data.redis.core.StringRedisTemplate;
import org.springframework.stereotype.Component;
import com.qq.weixin.mp.aes.AesException;
import com.qq.weixin.mp.aes.WXBizMsgCrypt;
import weixin.popular.api.API;
import weixin.popular.client.LocalHttpClient;
import weixin.popular.support.TokenManager; | package org.myazure.weixin.lisenner;
/**
* Token 监听器
*
* @author WangZhen
*
*/
@Component("servletContextListener")
public class SystemInitListener implements ServletContextListener {
private static final Logger LOG = LoggerFactory.getLogger(SystemInitListener.class);
@Value("${weixin.compAppId}")
protected String MYAZURE_APP_ID;
@Value("${weixin.compAppSecret}")
protected String MYAZURE_APP_SECRET;
@Value("${weixin.encode.token}")
protected String MYAZURE_ENCODE_TOKEN;
@Value("${weixin.encode.key}")
protected String MYAZURE_ENCODE_KEY;
@Value("${myazure.appUrl}")
protected String MYAZURE_APP_URL;
@Value("${myazure.serverId}")
protected String MYAZURE_SERVER_ID;
@Autowired
private StringRedisTemplate redisTemplate;
@Override
public void contextInitialized(ServletContextEvent sce) {
MyazureConstants.MYAZURE_APP_ID = MYAZURE_APP_ID;
MyazureConstants.MYAZURE_APP_SECRET = MYAZURE_APP_SECRET;
MyazureConstants.MYAZURE_ENCODE_TOKEN = MYAZURE_ENCODE_TOKEN;
MyazureConstants.MYAZURE_ENCODE_KEY = MYAZURE_ENCODE_KEY;
MyazureConstants.MYAZURE_APP_URL = MYAZURE_APP_URL;
MyazureConstants.MYAZURE_SERVER_ID = MYAZURE_SERVER_ID;
API.defaultMode(API.MODE_POPULAR); | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
//
// Path: src/main/java/org/myazure/weixin/constant/WeixinConstans.java
// public class WeixinConstans {
// public static ExpireKey expireKey = new DefaultExpireKey();
// public static final String BASE_WEIXIN_API_URI = "https://api.weixin.qq.com";
// public static final String PARAM_ACCESS_TOKEN = "access_token";
// public static final String TOKEN_STRING = "token";
// public static final String COMPONENT_ACCESS_TOKEN_KEY = "component.access.token";
// public static final String PRE_AUTH_CODE_KEY = "pre.auth.code";
// public static final String AUTHORIZER_ACCESS_TOKEN_KEY = "authorizer.access.token";
// public static final String AUTHORIZER_REFRESH_TOKEN_KEY = "authorizer.refresh.token";
// // WECHAT MSG INFO
// public static final int FUNCTION_MSG_MANAGEMENT = 1;// 消息管理权限
// public static final int FUNCTION_USER_MANAGEMENT = 2;
// public static final int FUNCTION_ACCOUNT_SERVICE_MANAGEMENT = 3;
// public static final int FUNCTION_WEB_SERVICE_MANAGEMENT = 4;
// public static final int FUNCTION_WEIXIN_STORE_MANAGEMENT = 5;
// public static final int FUNCTION_VICTOR_CUSTORMER_SERVICE_MANAGEMENT = 6;
// public static final int FUNCTION_MASS_NOTIFICATION_MANAGEMENT = 7;
// public static final int FUNCTION_WEIXIN_CARD_MANAGEMENT = 8;
// public static final int FUNCTION_SWEEP_MANAGEMENT = 9;
// public static final int FUNCTION_EVEN_FIWI_MANAGEMENT = 10;
// public static final int FUNCTION_MATERIAL_MANAGEMENT = 11;
// public static final int FUNCTION_WECHAT_SHAKE_PERIPHERAL_MANAGEMENT = 12;
// public static final int FUNCTION_WECHAT_STORE_MANAGEMENT = 13;
// public static final int FUNCTION_PAYMENT_MANAGEMENT = 14;
// public static final int FUNCTION_CUSTOM_MENU_MANAGEMENT = 15;
// }
// Path: src/main/java/org/myazure/weixin/lisenner/SystemInitListener.java
import javax.servlet.ServletContextEvent;
import javax.servlet.ServletContextListener;
import org.myazure.weixin.constant.MyazureConstants;
import org.myazure.weixin.constant.WeixinConstans;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.data.redis.core.StringRedisTemplate;
import org.springframework.stereotype.Component;
import com.qq.weixin.mp.aes.AesException;
import com.qq.weixin.mp.aes.WXBizMsgCrypt;
import weixin.popular.api.API;
import weixin.popular.client.LocalHttpClient;
import weixin.popular.support.TokenManager;
package org.myazure.weixin.lisenner;
/**
* Token 监听器
*
* @author WangZhen
*
*/
@Component("servletContextListener")
public class SystemInitListener implements ServletContextListener {
private static final Logger LOG = LoggerFactory.getLogger(SystemInitListener.class);
@Value("${weixin.compAppId}")
protected String MYAZURE_APP_ID;
@Value("${weixin.compAppSecret}")
protected String MYAZURE_APP_SECRET;
@Value("${weixin.encode.token}")
protected String MYAZURE_ENCODE_TOKEN;
@Value("${weixin.encode.key}")
protected String MYAZURE_ENCODE_KEY;
@Value("${myazure.appUrl}")
protected String MYAZURE_APP_URL;
@Value("${myazure.serverId}")
protected String MYAZURE_SERVER_ID;
@Autowired
private StringRedisTemplate redisTemplate;
@Override
public void contextInitialized(ServletContextEvent sce) {
MyazureConstants.MYAZURE_APP_ID = MYAZURE_APP_ID;
MyazureConstants.MYAZURE_APP_SECRET = MYAZURE_APP_SECRET;
MyazureConstants.MYAZURE_ENCODE_TOKEN = MYAZURE_ENCODE_TOKEN;
MyazureConstants.MYAZURE_ENCODE_KEY = MYAZURE_ENCODE_KEY;
MyazureConstants.MYAZURE_APP_URL = MYAZURE_APP_URL;
MyazureConstants.MYAZURE_SERVER_ID = MYAZURE_SERVER_ID;
API.defaultMode(API.MODE_POPULAR); | MyazureConstants.MYAZURE_COMPONENT_ACCESS_TOKEN = redisTemplate.opsForValue().get(WeixinConstans.COMPONENT_ACCESS_TOKEN_KEY); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/MaUserServiceImpl.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/repository/MaUserRepository.java
// public interface MaUserRepository extends PagingAndSortingRepository<MaUser, Long> {
//
// MaUser findOneByUserName(String userName);
// }
| import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.repository.MaUserRepository;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.cache.annotation.Cacheable;
import org.springframework.data.domain.Sort;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.stereotype.Service; | package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
@Service
public class MaUserServiceImpl implements MaUserService {
private static final Logger LOGGER = LoggerFactory.getLogger(MaUserServiceImpl.class);
@Autowired
private BCryptPasswordEncoder passwordEncoder;
| // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/repository/MaUserRepository.java
// public interface MaUserRepository extends PagingAndSortingRepository<MaUser, Long> {
//
// MaUser findOneByUserName(String userName);
// }
// Path: src/main/java/org/myazure/weixin/service/MaUserServiceImpl.java
import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.repository.MaUserRepository;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.cache.annotation.Cacheable;
import org.springframework.data.domain.Sort;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.stereotype.Service;
package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
@Service
public class MaUserServiceImpl implements MaUserService {
private static final Logger LOGGER = LoggerFactory.getLogger(MaUserServiceImpl.class);
@Autowired
private BCryptPasswordEncoder passwordEncoder;
| private final MaUserRepository userRepository; |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/MaUserServiceImpl.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/repository/MaUserRepository.java
// public interface MaUserRepository extends PagingAndSortingRepository<MaUser, Long> {
//
// MaUser findOneByUserName(String userName);
// }
| import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.repository.MaUserRepository;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.cache.annotation.Cacheable;
import org.springframework.data.domain.Sort;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.stereotype.Service; | package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
@Service
public class MaUserServiceImpl implements MaUserService {
private static final Logger LOGGER = LoggerFactory.getLogger(MaUserServiceImpl.class);
@Autowired
private BCryptPasswordEncoder passwordEncoder;
private final MaUserRepository userRepository;
@Autowired
public MaUserServiceImpl(MaUserRepository userRepository) {
this.userRepository = userRepository;
}
@Override
@Cacheable(value = "userCache",keyGenerator = "wiselyKeyGenerator") | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/repository/MaUserRepository.java
// public interface MaUserRepository extends PagingAndSortingRepository<MaUser, Long> {
//
// MaUser findOneByUserName(String userName);
// }
// Path: src/main/java/org/myazure/weixin/service/MaUserServiceImpl.java
import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.repository.MaUserRepository;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.cache.annotation.Cacheable;
import org.springframework.data.domain.Sort;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.stereotype.Service;
package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
@Service
public class MaUserServiceImpl implements MaUserService {
private static final Logger LOGGER = LoggerFactory.getLogger(MaUserServiceImpl.class);
@Autowired
private BCryptPasswordEncoder passwordEncoder;
private final MaUserRepository userRepository;
@Autowired
public MaUserServiceImpl(MaUserRepository userRepository) {
this.userRepository = userRepository;
}
@Override
@Cacheable(value = "userCache",keyGenerator = "wiselyKeyGenerator") | public MaUser getMaUserById(long id) { |
Myazure/weixin_component | src/main/java/org/myazure/weixin/service/MaUserServiceImpl.java | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/repository/MaUserRepository.java
// public interface MaUserRepository extends PagingAndSortingRepository<MaUser, Long> {
//
// MaUser findOneByUserName(String userName);
// }
| import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.repository.MaUserRepository;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.cache.annotation.Cacheable;
import org.springframework.data.domain.Sort;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.stereotype.Service; | package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
@Service
public class MaUserServiceImpl implements MaUserService {
private static final Logger LOGGER = LoggerFactory.getLogger(MaUserServiceImpl.class);
@Autowired
private BCryptPasswordEncoder passwordEncoder;
private final MaUserRepository userRepository;
@Autowired
public MaUserServiceImpl(MaUserRepository userRepository) {
this.userRepository = userRepository;
}
@Override
@Cacheable(value = "userCache",keyGenerator = "wiselyKeyGenerator")
public MaUser getMaUserById(long id) {
LOGGER.info("[Myazure Weixin]: getMaUserById()");
return userRepository.findOne(id);
}
@Override
public MaUser getMaUserByName(String name) {
return userRepository.findOneByUserName(name);
}
@Override
@Cacheable(value = "userCache",keyGenerator = "wiselyKeyGenerator")
public Collection<MaUser> getAllMaUsers() {
LOGGER.info("[Myazure Weixin]: getAllAdUsers()");
return (Collection<MaUser>) userRepository.findAll(new Sort("userName"));
}
@Override | // Path: src/main/java/org/myazure/weixin/domain/MaUser.java
// @Entity
// @Table(name = "myazure_weixin_user")
// public class MaUser extends BaseEntity {
//
// @Id
// @GeneratedValue(strategy = GenerationType.AUTO)
// @Column(name = "user_id")
// private long id;
//
// @Column(name = "username", nullable = false, unique = true)
// private String userName;
//
// @Column(name = "password", nullable = false)
// private String password;
//
// @Column(name = "role", nullable = false)
// @Enumerated(EnumType.STRING)
// private MaRole role;
//
// @Column(name = "active", columnDefinition = "BIT", length = 1)
// private boolean active = false;
//
// public MaUser() {
//
// }
//
// public MaUser(String userName, String password, MaRole role) {
// this.userName = userName;
// this.password = password;
// this.role = role;
// }
//
// public long getId() {
// return id;
// }
//
// public void setId(long id) {
// this.id = id;
// }
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public boolean isActive() {
// return active;
// }
//
// public void setActive(boolean active) {
// this.active = active;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
// public class MaUserEntity {
//
// @NotEmpty
// private Long id;
//
// @NotEmpty
// private String userName = "";
//
// private String password = "";
//
// private String passwordRepeated = "";
//
// @NotNull
// private MaRole role = MaRole.USER;
//
// public String getUserName() {
// return userName;
// }
//
// public void setUserName(String userName) {
// this.userName = userName;
// }
//
// public String getPassword() {
// return password;
// }
//
// public void setPassword(String password) {
// this.password = password;
// }
//
// public String getPasswordRepeated() {
// return passwordRepeated;
// }
//
// public void setPasswordRepeated(String passwordRepeated) {
// this.passwordRepeated = passwordRepeated;
// }
//
// public MaRole getRole() {
// return role;
// }
//
// public void setRole(MaRole role) {
// this.role = role;
// }
//
// public Long getId() {
// return id;
// }
//
// public void setId(Long id) {
// this.id = id;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/repository/MaUserRepository.java
// public interface MaUserRepository extends PagingAndSortingRepository<MaUser, Long> {
//
// MaUser findOneByUserName(String userName);
// }
// Path: src/main/java/org/myazure/weixin/service/MaUserServiceImpl.java
import java.util.Collection;
import org.myazure.weixin.domain.MaUser;
import org.myazure.weixin.domain.entity.MaUserEntity;
import org.myazure.weixin.repository.MaUserRepository;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.cache.annotation.Cacheable;
import org.springframework.data.domain.Sort;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.stereotype.Service;
package org.myazure.weixin.service;
/**
*
* @author WangZhen
*
*/
@Service
public class MaUserServiceImpl implements MaUserService {
private static final Logger LOGGER = LoggerFactory.getLogger(MaUserServiceImpl.class);
@Autowired
private BCryptPasswordEncoder passwordEncoder;
private final MaUserRepository userRepository;
@Autowired
public MaUserServiceImpl(MaUserRepository userRepository) {
this.userRepository = userRepository;
}
@Override
@Cacheable(value = "userCache",keyGenerator = "wiselyKeyGenerator")
public MaUser getMaUserById(long id) {
LOGGER.info("[Myazure Weixin]: getMaUserById()");
return userRepository.findOne(id);
}
@Override
public MaUser getMaUserByName(String name) {
return userRepository.findOneByUserName(name);
}
@Override
@Cacheable(value = "userCache",keyGenerator = "wiselyKeyGenerator")
public Collection<MaUser> getAllMaUsers() {
LOGGER.info("[Myazure Weixin]: getAllAdUsers()");
return (Collection<MaUser>) userRepository.findAll(new Sort("userName"));
}
@Override | public MaUser create(MaUserEntity form) { |
Myazure/weixin_component | src/main/java/org/myazure/weixin/MyazureWeiXin.java | // Path: src/main/java/org/myazure/weixin/configuration/AppUrlService.java
// public class AppUrlService {
//
// @Value("${myazure.appUrl}")
// private String appUrl;
//
// public AppUrlService() {
//
// }
//
// public void setAppUrl(String appUrl) {
// this.appUrl = appUrl;
// }
//
// public String getAppUrl() {
// return appUrl;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/configuration/MyazureEmbeddedServletContainerCustomizer.java
// public class MyazureEmbeddedServletContainerCustomizer implements EmbeddedServletContainerCustomizer {
//
// private static final Logger LOG = LoggerFactory.getLogger(MyazureEmbeddedServletContainerCustomizer.class);
//
// @Value("${servlet.container.maxThreads}")
// private int MAX_THREADS;
//
// @Override
// public void customize(ConfigurableEmbeddedServletContainer factory) {
// if (factory instanceof TomcatEmbeddedServletContainerFactory) {
// customizeTomcat((TomcatEmbeddedServletContainerFactory) factory);
// }
// }
//
// public void customizeTomcat(TomcatEmbeddedServletContainerFactory factory) {
// factory.addConnectorCustomizers(new TomcatConnectorCustomizer() {
// @Override
// public void customize(Connector connector) {
// Object defaultMaxThreads = connector.getAttribute("maxThreads");
// connector.setAttribute("maxThreads", MAX_THREADS);
// LOG.info("Changed Tomcat connector maxThreads from " + defaultMaxThreads + " to " + MAX_THREADS);
// }
// });
// }
// }
| import org.myazure.weixin.configuration.AppUrlService;
import org.myazure.weixin.configuration.MyazureEmbeddedServletContainerCustomizer;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.boot.SpringApplication;
import org.springframework.boot.autoconfigure.EnableAutoConfiguration;
import org.springframework.boot.autoconfigure.SpringBootApplication;
import org.springframework.boot.context.embedded.EmbeddedServletContainerCustomizer;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.ComponentScan;
import org.springframework.context.annotation.Configuration;
import org.springframework.data.jpa.repository.config.EnableJpaAuditing;
import org.springframework.data.jpa.repository.config.EnableJpaRepositories;
import org.springframework.http.client.ClientHttpRequestFactory;
import org.springframework.http.client.SimpleClientHttpRequestFactory;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.transaction.annotation.EnableTransactionManagement;
import org.springframework.web.client.RestTemplate; | package org.myazure.weixin;
/**
*
* @author WangZhen
*
*/
@Configuration
@ComponentScan
@EnableAutoConfiguration
@EnableTransactionManagement
@EnableJpaRepositories
@EnableJpaAuditing
@SpringBootApplication
// @EnableCaching
public class MyazureWeiXin {
@SuppressWarnings("unused")
private static final Logger LOG = LoggerFactory.getLogger(MyazureWeiXin.class);
@Bean
public RestTemplate restTemplate() {
return new RestTemplate(clientHttpRequestFactory());
}
@Bean
public BCryptPasswordEncoder passwordEncoder() {
return new BCryptPasswordEncoder();
}
@Bean | // Path: src/main/java/org/myazure/weixin/configuration/AppUrlService.java
// public class AppUrlService {
//
// @Value("${myazure.appUrl}")
// private String appUrl;
//
// public AppUrlService() {
//
// }
//
// public void setAppUrl(String appUrl) {
// this.appUrl = appUrl;
// }
//
// public String getAppUrl() {
// return appUrl;
// }
// }
//
// Path: src/main/java/org/myazure/weixin/configuration/MyazureEmbeddedServletContainerCustomizer.java
// public class MyazureEmbeddedServletContainerCustomizer implements EmbeddedServletContainerCustomizer {
//
// private static final Logger LOG = LoggerFactory.getLogger(MyazureEmbeddedServletContainerCustomizer.class);
//
// @Value("${servlet.container.maxThreads}")
// private int MAX_THREADS;
//
// @Override
// public void customize(ConfigurableEmbeddedServletContainer factory) {
// if (factory instanceof TomcatEmbeddedServletContainerFactory) {
// customizeTomcat((TomcatEmbeddedServletContainerFactory) factory);
// }
// }
//
// public void customizeTomcat(TomcatEmbeddedServletContainerFactory factory) {
// factory.addConnectorCustomizers(new TomcatConnectorCustomizer() {
// @Override
// public void customize(Connector connector) {
// Object defaultMaxThreads = connector.getAttribute("maxThreads");
// connector.setAttribute("maxThreads", MAX_THREADS);
// LOG.info("Changed Tomcat connector maxThreads from " + defaultMaxThreads + " to " + MAX_THREADS);
// }
// });
// }
// }
// Path: src/main/java/org/myazure/weixin/MyazureWeiXin.java
import org.myazure.weixin.configuration.AppUrlService;
import org.myazure.weixin.configuration.MyazureEmbeddedServletContainerCustomizer;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.boot.SpringApplication;
import org.springframework.boot.autoconfigure.EnableAutoConfiguration;
import org.springframework.boot.autoconfigure.SpringBootApplication;
import org.springframework.boot.context.embedded.EmbeddedServletContainerCustomizer;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.ComponentScan;
import org.springframework.context.annotation.Configuration;
import org.springframework.data.jpa.repository.config.EnableJpaAuditing;
import org.springframework.data.jpa.repository.config.EnableJpaRepositories;
import org.springframework.http.client.ClientHttpRequestFactory;
import org.springframework.http.client.SimpleClientHttpRequestFactory;
import org.springframework.security.crypto.bcrypt.BCryptPasswordEncoder;
import org.springframework.transaction.annotation.EnableTransactionManagement;
import org.springframework.web.client.RestTemplate;
package org.myazure.weixin;
/**
*
* @author WangZhen
*
*/
@Configuration
@ComponentScan
@EnableAutoConfiguration
@EnableTransactionManagement
@EnableJpaRepositories
@EnableJpaAuditing
@SpringBootApplication
// @EnableCaching
public class MyazureWeiXin {
@SuppressWarnings("unused")
private static final Logger LOG = LoggerFactory.getLogger(MyazureWeiXin.class);
@Bean
public RestTemplate restTemplate() {
return new RestTemplate(clientHttpRequestFactory());
}
@Bean
public BCryptPasswordEncoder passwordEncoder() {
return new BCryptPasswordEncoder();
}
@Bean | public AppUrlService appUrlService() { |
Myazure/weixin_component | src/main/java/org/myazure/weixin/handlers/QrCodeHandler.java | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
| import java.awt.image.BufferedImage;
import org.myazure.weixin.constant.MyazureConstants;
import weixin.popular.api.QrcodeAPI;
import weixin.popular.bean.qrcode.QrcodeTicket; | package org.myazure.weixin.handlers;
/**
*
* @author WangZhen
*
*/
public class QrCodeHandler {
/**
* 创建 二维码
*
* @param access_token
* access_token
* @param expire_seconds
* 最大不超过604800秒（即30天）
* @param scene_id
* 场景值ID，32位非0整型 最多10万个
* @return QrcodeTicket
*/
public QrcodeTicket qrcodeCreate(String JSONData, int expire_seconds, int scene_id) {
if (expire_seconds > 0) { | // Path: src/main/java/org/myazure/weixin/constant/MyazureConstants.java
// public class MyazureConstants {
// public static final String LOG_SPLIT_LINE = "========================MYAZURE====SPLIT====LINE========================";
// public static final String MYAZURE_WEIXIN_ADMIN_APPID="wx86c66f041e334ba4";
// public static final String MYAZURE_WEIXIN_ADMIN_APPSECRET="dbee2c24cc0dd3c8bb0805de2f4e4606";
// public static final String MYAZURE_WEIXIN_ADMIN_OPENID="o14wavxo7TN_zRBDD3c-mIigYR4U";
//
// public static String MYAZURE_SERVER_ID;
// public static String MYAZURE_APP_ID;
// public static String MYAZURE_APP_SECRET;
// public static String MYAZURE_ENCODE_TOKEN;
// public static String MYAZURE_ENCODE_KEY;
// public static String MYAZURE_APP_URL;
// public static String MYAZURE_COMPONENT_VERIFY_TICKET;
// public static String MYAZURE_COMPONENT_ACCESS_TOKEN;
// public static String MYAZURE_PRE_AUTH_CODE;
// public static WXBizMsgCrypt MYAZUZRE_WXBIZMSGCRYPT;
//
// public static final String ERR_OA_NOT_FOUNDED="OfficalAccountNotFound";
//
// }
// Path: src/main/java/org/myazure/weixin/handlers/QrCodeHandler.java
import java.awt.image.BufferedImage;
import org.myazure.weixin.constant.MyazureConstants;
import weixin.popular.api.QrcodeAPI;
import weixin.popular.bean.qrcode.QrcodeTicket;
package org.myazure.weixin.handlers;
/**
*
* @author WangZhen
*
*/
public class QrCodeHandler {
/**
* 创建 二维码
*
* @param access_token
* access_token
* @param expire_seconds
* 最大不超过604800秒（即30天）
* @param scene_id
* 场景值ID，32位非0整型 最多10万个
* @return QrcodeTicket
*/
public QrcodeTicket qrcodeCreate(String JSONData, int expire_seconds, int scene_id) {
if (expire_seconds > 0) { | return QrcodeAPI.qrcodeCreateTemp(MyazureConstants.MYAZURE_COMPONENT_ACCESS_TOKEN, expire_seconds, scene_id); |
Myazure/weixin_component | src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java | // Path: src/main/java/org/myazure/weixin/domain/MaRole.java
// public enum MaRole {
// USER, ADMIN
// }
| import javax.validation.constraints.NotNull;
import org.hibernate.validator.constraints.NotEmpty;
import org.myazure.weixin.domain.MaRole; | package org.myazure.weixin.domain.entity;
/**
*
* @author WangZhen
*
*/
public class MaUserEntity {
@NotEmpty
private Long id;
@NotEmpty
private String userName = "";
private String password = "";
private String passwordRepeated = "";
@NotNull | // Path: src/main/java/org/myazure/weixin/domain/MaRole.java
// public enum MaRole {
// USER, ADMIN
// }
// Path: src/main/java/org/myazure/weixin/domain/entity/MaUserEntity.java
import javax.validation.constraints.NotNull;
import org.hibernate.validator.constraints.NotEmpty;
import org.myazure.weixin.domain.MaRole;
package org.myazure.weixin.domain.entity;
/**
*
* @author WangZhen
*
*/
public class MaUserEntity {
@NotEmpty
private Long id;
@NotEmpty
private String userName = "";
private String password = "";
private String passwordRepeated = "";
@NotNull | private MaRole role = MaRole.USER; |
StumbleUponArchive/hbase | src/test/java/org/apache/hadoop/hbase/zookeeper/TestZKTable.java | // Path: src/main/java/org/apache/hadoop/hbase/zookeeper/ZKTable.java
// public static enum TableState {
// ENABLED,
// DISABLED,
// DISABLING,
// ENABLING
// };
| import org.apache.zookeeper.data.Stat;
import org.junit.AfterClass;
import org.junit.BeforeClass;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import org.mockito.Mockito;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertTrue;
import java.io.IOException;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.hadoop.hbase.*;
import org.apache.hadoop.hbase.zookeeper.ZKTable.TableState;
import org.apache.zookeeper.KeeperException; | assertFalse(zkt.isDisabledTable(name));
assertFalse(zkt.getDisabledTables().contains(name));
assertTrue(zkt.isTablePresent(name));
zkt.setEnabledTable(name);
assertTrue(zkt.isEnabledTable(name));
assertFalse(zkt.isEnablingTable(name));
assertTrue(zkt.isTablePresent(name));
zkt.setDeletedTable(name);
assertFalse(zkt.isEnabledTable(name));
assertFalse(zkt.isDisablingTable(name));
assertFalse(zkt.isDisabledTable(name));
assertFalse(zkt.isEnablingTable(name));
assertFalse(zkt.isDisablingOrDisabledTable(name));
assertFalse(zkt.isDisabledOrEnablingTable(name));
assertFalse(zkt.isTablePresent(name));
}
/**
* Test that ZK table writes table state in formats expected by 0.92 and 0.94 clients
*/
@Test
public void test9294Compatibility() throws Exception {
final String tableName = "test9294Compatibility";
ZooKeeperWatcher zkw = new ZooKeeperWatcher(TEST_UTIL.getConfiguration(),
tableName, abortable, true);
ZKTable zkt = new ZKTable(zkw);
zkt.setEnabledTable(tableName);
// check that current/0.94 format table has proper ENABLED format
assertTrue( | // Path: src/main/java/org/apache/hadoop/hbase/zookeeper/ZKTable.java
// public static enum TableState {
// ENABLED,
// DISABLED,
// DISABLING,
// ENABLING
// };
// Path: src/test/java/org/apache/hadoop/hbase/zookeeper/TestZKTable.java
import org.apache.zookeeper.data.Stat;
import org.junit.AfterClass;
import org.junit.BeforeClass;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import org.mockito.Mockito;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertTrue;
import java.io.IOException;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.hadoop.hbase.*;
import org.apache.hadoop.hbase.zookeeper.ZKTable.TableState;
import org.apache.zookeeper.KeeperException;
assertFalse(zkt.isDisabledTable(name));
assertFalse(zkt.getDisabledTables().contains(name));
assertTrue(zkt.isTablePresent(name));
zkt.setEnabledTable(name);
assertTrue(zkt.isEnabledTable(name));
assertFalse(zkt.isEnablingTable(name));
assertTrue(zkt.isTablePresent(name));
zkt.setDeletedTable(name);
assertFalse(zkt.isEnabledTable(name));
assertFalse(zkt.isDisablingTable(name));
assertFalse(zkt.isDisabledTable(name));
assertFalse(zkt.isEnablingTable(name));
assertFalse(zkt.isDisablingOrDisabledTable(name));
assertFalse(zkt.isDisabledOrEnablingTable(name));
assertFalse(zkt.isTablePresent(name));
}
/**
* Test that ZK table writes table state in formats expected by 0.92 and 0.94 clients
*/
@Test
public void test9294Compatibility() throws Exception {
final String tableName = "test9294Compatibility";
ZooKeeperWatcher zkw = new ZooKeeperWatcher(TEST_UTIL.getConfiguration(),
tableName, abortable, true);
ZKTable zkt = new ZKTable(zkw);
zkt.setEnabledTable(tableName);
// check that current/0.94 format table has proper ENABLED format
assertTrue( | ZKTableReadOnly.getTableState(zkw, zkw.masterTableZNode, tableName) == TableState.ENABLED); |
QuixomTech/DeviceInfo | app/src/main/java/com/quixom/apps/deviceinfo/fragments/HomeFragment.java | // Path: app/src/main/java/com/quixom/apps/deviceinfo/utilities/KeyUtil.java
// public class KeyUtil {
// public static final String datePattern = "dd MMM yyyy HH:mm:ss z";
// public static final String KEY_MODE = "key_mode";
//
// /*** Sensor */
// public static final String KEY_SENSOR_NAME = "key_sensor_name";
// public static final String KEY_SENSOR_TYPE = "key_sensor_type";
// public static final String KEY_SENSOR_ICON = "key_sensor_icon";
//
// public static float KEY_LAST_KNOWN_HUMIDITY = 0f;
//
// public static final int KEY_CAMERA_CODE = 101;
// public static final int KEY_CALL_PERMISSION = 102;
// public static final int KEY_READ_PHONE_STATE = 103;
// public static final int IS_USER_COME_FROM_SYSTEM_APPS = 1;
// public static final int IS_USER_COME_FROM_USER_APPS = 2;
// }
| import android.annotation.SuppressLint;
import android.content.Context;
import android.os.Build;
import android.os.Bundle;
import android.provider.Settings;
import android.support.annotation.Nullable;
import android.support.v4.app.Fragment;
import android.support.v7.widget.Toolbar;
import android.util.DisplayMetrics;
import android.view.Display;
import android.view.LayoutInflater;
import android.view.View;
import android.view.ViewGroup;
import android.view.Window;
import android.view.WindowManager;
import android.widget.ImageView;
import android.widget.TextView;
import com.quixom.apps.deviceinfo.R;
import com.quixom.apps.deviceinfo.utilities.KeyUtil;
import butterknife.BindView;
import butterknife.ButterKnife;
import butterknife.Unbinder; | @BindView(R.id.tv_title)
TextView tvTitle;
@BindView(R.id.toolbar)
Toolbar toolbar;
@BindView(R.id.tv_manufacturer)
TextView tvManufacturer;
@BindView(R.id.tv_brand_name)
TextView tvBrand;
@BindView(R.id.tv_model_number)
TextView tvModel;
@BindView(R.id.tv_board)
TextView tvBoard;
@BindView(R.id.tv_hardware)
TextView tvHardware;
@BindView(R.id.tv_serial_no)
TextView tvSerialNo;
@BindView(R.id.tv_android_id)
TextView tvAndroidId;
@BindView(R.id.tv_screen_resolution)
TextView tvScreenResolution;
@BindView(R.id.tv_boot_loader)
TextView tvBootLoader;
@BindView(R.id.tv_user)
TextView tvUser;
@BindView(R.id.tv_host)
TextView tvHost;
public static HomeFragment getInstance(int mode) {
HomeFragment homeFragment = new HomeFragment();
Bundle bundle = new Bundle(); | // Path: app/src/main/java/com/quixom/apps/deviceinfo/utilities/KeyUtil.java
// public class KeyUtil {
// public static final String datePattern = "dd MMM yyyy HH:mm:ss z";
// public static final String KEY_MODE = "key_mode";
//
// /*** Sensor */
// public static final String KEY_SENSOR_NAME = "key_sensor_name";
// public static final String KEY_SENSOR_TYPE = "key_sensor_type";
// public static final String KEY_SENSOR_ICON = "key_sensor_icon";
//
// public static float KEY_LAST_KNOWN_HUMIDITY = 0f;
//
// public static final int KEY_CAMERA_CODE = 101;
// public static final int KEY_CALL_PERMISSION = 102;
// public static final int KEY_READ_PHONE_STATE = 103;
// public static final int IS_USER_COME_FROM_SYSTEM_APPS = 1;
// public static final int IS_USER_COME_FROM_USER_APPS = 2;
// }
// Path: app/src/main/java/com/quixom/apps/deviceinfo/fragments/HomeFragment.java
import android.annotation.SuppressLint;
import android.content.Context;
import android.os.Build;
import android.os.Bundle;
import android.provider.Settings;
import android.support.annotation.Nullable;
import android.support.v4.app.Fragment;
import android.support.v7.widget.Toolbar;
import android.util.DisplayMetrics;
import android.view.Display;
import android.view.LayoutInflater;
import android.view.View;
import android.view.ViewGroup;
import android.view.Window;
import android.view.WindowManager;
import android.widget.ImageView;
import android.widget.TextView;
import com.quixom.apps.deviceinfo.R;
import com.quixom.apps.deviceinfo.utilities.KeyUtil;
import butterknife.BindView;
import butterknife.ButterKnife;
import butterknife.Unbinder;
@BindView(R.id.tv_title)
TextView tvTitle;
@BindView(R.id.toolbar)
Toolbar toolbar;
@BindView(R.id.tv_manufacturer)
TextView tvManufacturer;
@BindView(R.id.tv_brand_name)
TextView tvBrand;
@BindView(R.id.tv_model_number)
TextView tvModel;
@BindView(R.id.tv_board)
TextView tvBoard;
@BindView(R.id.tv_hardware)
TextView tvHardware;
@BindView(R.id.tv_serial_no)
TextView tvSerialNo;
@BindView(R.id.tv_android_id)
TextView tvAndroidId;
@BindView(R.id.tv_screen_resolution)
TextView tvScreenResolution;
@BindView(R.id.tv_boot_loader)
TextView tvBootLoader;
@BindView(R.id.tv_user)
TextView tvUser;
@BindView(R.id.tv_host)
TextView tvHost;
public static HomeFragment getInstance(int mode) {
HomeFragment homeFragment = new HomeFragment();
Bundle bundle = new Bundle(); | bundle.putInt(KeyUtil.KEY_MODE, mode); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/IntegerToBigIntegerTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigInteger;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class IntegerToBigIntegerTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new IntegerToBigInteger();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigInteger.class, 10, -1);
}
@Test
public void testValidateFail() throws Exception { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/IntegerToBigIntegerTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigInteger;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class IntegerToBigIntegerTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new IntegerToBigInteger();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigInteger.class, 10, -1);
}
@Test
public void testValidateFail() throws Exception { | expectedEx.expect(TypeConverterException.class); |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/serializers/FullMapper.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/CopyBookException.java
// public class CopyBookException extends RuntimeException {
// private static final long serialVersionUID = 28118369047109260L;
// public CopyBookException(String message) {
// super(message);
// }
//
// public CopyBookException(String message, TypeConverterException ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
//
// public CopyBookException(String message, Exception ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
// }
| import com.nordea.oss.copybook.exceptions.CopyBookException;
import java.lang.reflect.Array;
import java.nio.ByteBuffer;
import java.util.HashMap;
import java.util.List;
import java.util.Map; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class FullMapper extends CopyBookMapperBase {
public <T> byte[] serialize(T obj) {
ByteBuffer buffer = ByteBuffer.wrap(new byte[this.maxRecordSize]);
writeFieldsToBuffer(this.fields, buffer, obj);
byte[] result = new byte[buffer.position()];
System.arraycopy(buffer.array(), 0, result, 0, buffer.position()); // Copy bytes to result array
return result;
}
private <T> void writeFieldsToBuffer(List<CopyBookField> fields, ByteBuffer buffer, T rootObj) {
for(CopyBookField field : fields) {
if(field.isArray()) {
Object array = field.getObject(rootObj);
int arraySize = Math.max(array != null ? Array.getLength(array) : 0, field.getMinOccurs());
if(field.hasSubCopyBookFields()) {
// Complex array types fx. Request[]
for (int i = 0; i < arraySize; i++) {
writeFieldsToBuffer(field.getSubCopyBookFields(), buffer, field.getObject(rootObj, i));
}
} else {
// Simple array types, fx. int[]
for (int i = 0; i < arraySize; i++) {
buffer.put(field.getBytes(rootObj, array, i, true));
}
}
} else if(field.hasSubCopyBookFields()) {
// Complex type fx, Request
writeFieldsToBuffer(field.getSubCopyBookFields(), buffer, field.getObject(rootObj));
} else {
// Simple type fx. int
byte[] bytes = field.getBytes(rootObj, true);
if(bytes != null) {
buffer.put(bytes);
} else if(rootObj == null) { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/CopyBookException.java
// public class CopyBookException extends RuntimeException {
// private static final long serialVersionUID = 28118369047109260L;
// public CopyBookException(String message) {
// super(message);
// }
//
// public CopyBookException(String message, TypeConverterException ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
//
// public CopyBookException(String message, Exception ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/FullMapper.java
import com.nordea.oss.copybook.exceptions.CopyBookException;
import java.lang.reflect.Array;
import java.nio.ByteBuffer;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class FullMapper extends CopyBookMapperBase {
public <T> byte[] serialize(T obj) {
ByteBuffer buffer = ByteBuffer.wrap(new byte[this.maxRecordSize]);
writeFieldsToBuffer(this.fields, buffer, obj);
byte[] result = new byte[buffer.position()];
System.arraycopy(buffer.array(), 0, result, 0, buffer.position()); // Copy bytes to result array
return result;
}
private <T> void writeFieldsToBuffer(List<CopyBookField> fields, ByteBuffer buffer, T rootObj) {
for(CopyBookField field : fields) {
if(field.isArray()) {
Object array = field.getObject(rootObj);
int arraySize = Math.max(array != null ? Array.getLength(array) : 0, field.getMinOccurs());
if(field.hasSubCopyBookFields()) {
// Complex array types fx. Request[]
for (int i = 0; i < arraySize; i++) {
writeFieldsToBuffer(field.getSubCopyBookFields(), buffer, field.getObject(rootObj, i));
}
} else {
// Simple array types, fx. int[]
for (int i = 0; i < arraySize; i++) {
buffer.put(field.getBytes(rootObj, array, i, true));
}
}
} else if(field.hasSubCopyBookFields()) {
// Complex type fx, Request
writeFieldsToBuffer(field.getSubCopyBookFields(), buffer, field.getObject(rootObj));
} else {
// Simple type fx. int
byte[] bytes = field.getBytes(rootObj, true);
if(bytes != null) {
buffer.put(bytes);
} else if(rootObj == null) { | throw new CopyBookException("Root object for field '" + field.getFieldName() + "' is null and the TypeConverter '" + field.getConverter().getClass().getSimpleName() + "' does not support null filler"); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToBigIntegerPostfixTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigInteger;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToBigIntegerPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0'); | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToBigIntegerPostfixTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigInteger;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToBigIntegerPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0'); | config.setSigningType(CopyBookFieldSigningType.POSTFIX); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToBigIntegerPostfixTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigInteger;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToBigIntegerPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.POSTFIX);
typeConverter = new SignedIntegerToBigInteger();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigInteger.class, 2, -1);
}
| // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToBigIntegerPostfixTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigInteger;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToBigIntegerPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.POSTFIX);
typeConverter = new SignedIntegerToBigInteger();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigInteger.class, 2, -1);
}
| @Test(expected = TypeConverterException.class) |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimalPostfixTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimalPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0'); | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimalPostfixTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimalPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0'); | config.setSigningType(CopyBookFieldSigningType.POSTFIX); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimalPostfixTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimalPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.POSTFIX);
typeConverter = new SignedDecimalToBigDecimal();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigDecimal.class, 10, -1);
}
@Test
public void testValidateFail() throws Exception { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimalPostfixTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimalPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.POSTFIX);
typeConverter = new SignedDecimalToBigDecimal();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigDecimal.class, 10, -1);
}
@Test
public void testValidateFail() throws Exception { | expectedEx.expect(TypeConverterException.class); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/IntegerToBooleanTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class IntegerToBooleanTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new IntegerToBoolean();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(Boolean.TYPE, 2, -1);
}
| // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/IntegerToBooleanTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class IntegerToBooleanTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new IntegerToBoolean();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(Boolean.TYPE, 2, -1);
}
| @Test(expected = TypeConverterException.class) |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToIntegerLastByteEBCDICBit5Test.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.Charset;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToIntegerLastByteEBCDICBit5Test {
private TypeConverter typeConverter;
private TypeConverterConfig config;
private Charset charset;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.charset = Charset.forName("cp037");
this.config = new TypeConverterConfig();
this.config.setCharset(this.charset);
this.config.setPaddingChar('0'); | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToIntegerLastByteEBCDICBit5Test.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.Charset;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToIntegerLastByteEBCDICBit5Test {
private TypeConverter typeConverter;
private TypeConverterConfig config;
private Charset charset;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.charset = Charset.forName("cp037");
this.config = new TypeConverterConfig();
this.config.setCharset(this.charset);
this.config.setPaddingChar('0'); | config.setSigningType(CopyBookFieldSigningType.LAST_BYTE_EBCDIC_BIT5); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToIntegerLastByteEBCDICBit5Test.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.Charset;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToIntegerLastByteEBCDICBit5Test {
private TypeConverter typeConverter;
private TypeConverterConfig config;
private Charset charset;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.charset = Charset.forName("cp037");
this.config = new TypeConverterConfig();
this.config.setCharset(this.charset);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.LAST_BYTE_EBCDIC_BIT5);
typeConverter = new SignedIntegerToInteger();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(Integer.TYPE, 2, -1);
}
| // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToIntegerLastByteEBCDICBit5Test.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.Charset;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToIntegerLastByteEBCDICBit5Test {
private TypeConverter typeConverter;
private TypeConverterConfig config;
private Charset charset;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.charset = Charset.forName("cp037");
this.config = new TypeConverterConfig();
this.config.setCharset(this.charset);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.LAST_BYTE_EBCDIC_BIT5);
typeConverter = new SignedIntegerToInteger();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(Integer.TYPE, 2, -1);
}
| @Test(expected = TypeConverterException.class) |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/annotations/CopyBook.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookMapper.java
// public interface CopyBookMapper {
// void initialize(CopyBookSerializerConfig config);
// <T> byte[] serialize(T obj);
// <T> T deserialize(byte[] bytes, Class<T> type);
// int getMaxRecordSize();
// void setMaxRecordSize(int size);
// int getMinRecordSize();
// void setMinRecordSize(int size);
// }
| import com.nordea.oss.copybook.serializers.CopyBookMapper;
import java.lang.annotation.ElementType;
import java.lang.annotation.Retention;
import java.lang.annotation.RetentionPolicy;
import java.lang.annotation.Target; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.annotations;
@Retention(RetentionPolicy.RUNTIME)
@Target(ElementType.TYPE)
public @interface CopyBook { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookMapper.java
// public interface CopyBookMapper {
// void initialize(CopyBookSerializerConfig config);
// <T> byte[] serialize(T obj);
// <T> T deserialize(byte[] bytes, Class<T> type);
// int getMaxRecordSize();
// void setMaxRecordSize(int size);
// int getMinRecordSize();
// void setMinRecordSize(int size);
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/annotations/CopyBook.java
import com.nordea.oss.copybook.serializers.CopyBookMapper;
import java.lang.annotation.ElementType;
import java.lang.annotation.Retention;
import java.lang.annotation.RetentionPolicy;
import java.lang.annotation.Target;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.annotations;
@Retention(RetentionPolicy.RUNTIME)
@Target(ElementType.TYPE)
public @interface CopyBook { | Class<? extends CopyBookMapper> type() default CopyBookMapper.class; // Java sucks and we can use null as default value, so we pick something we would never user here |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/serializers/CopyBookMapperFullTypeExceptionsTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/CopyBookSerializer.java
// public class CopyBookSerializer {
// private CopyBookMapper serializer;
//
// public CopyBookSerializer(Class<?> type) {
// this(type, false);
// }
//
// public CopyBookSerializer(Class<?> type, boolean debug) {
// this(type, null, debug);
// }
//
// public CopyBookSerializer(Class<?> type, Class<CopyBookMapper> mapper, boolean debug) {
// CopyBookParser parser = new CopyBookParser(type, debug);
// try {
// if(mapper != null) {
// serializer = mapper.getDeclaredConstructor().newInstance();
//
// } else {
// serializer = parser.getSerializerClass().getDeclaredConstructor().newInstance();
// }
// serializer.initialize(parser.getConfig());
//
// } catch (InstantiationException | IllegalAccessException | InvocationTargetException | NoSuchMethodException e) {
// throw new CopyBookException("Failed to load Serialization class("+ parser.getSerializerClass().getSimpleName() +")", e);
// }
// }
//
// public <T> byte[] serialize(T obj) {
// return serializer.serialize(obj);
// }
//
// public <T> T deserialize(byte[] bytes, Class<T> type) {
// return serializer.deserialize(bytes, type);
// }
//
// public <T> T deserialize(InputStream inputStream, Class<T> type) throws IOException {
// return deserialize(ByteUtils.toByteArray(inputStream), type);
// }
//
// public List<CopyBookException> getErrors() {
// return null; // TODO: Implement depending on errorValue
// }
//
// public int getMinRecordSize() {
// return serializer.getMinRecordSize();
// }
//
// public int getMaxRecordSize() {
// return serializer.getMaxRecordSize();
// }
//
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/CopyBookException.java
// public class CopyBookException extends RuntimeException {
// private static final long serialVersionUID = 28118369047109260L;
// public CopyBookException(String message) {
// super(message);
// }
//
// public CopyBookException(String message, TypeConverterException ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
//
// public CopyBookException(String message, Exception ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
// }
| import com.nordea.oss.copybook.annotations.CopyBookLine;
import com.nordea.oss.copybook.CopyBookSerializer;
import com.nordea.oss.copybook.annotations.CopyBook;
import com.nordea.oss.copybook.exceptions.CopyBookException;
import org.junit.Rule;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class CopyBookMapperFullTypeExceptionsTest {
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@CopyBook(type = FullMapper.class)
static public class fieldTypeInteger {
@CopyBookLine("01 FIELD PIC 9(2).")
public int field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeString {
@CopyBookLine("01 FIELD PIC X(2).")
public String field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeDecimal {
@CopyBookLine("01 FIELD PIC 9(2)V9(2).")
public BigDecimal field;
}
@org.junit.Test
public void testRightFieldTypeInteger() throws Exception { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/CopyBookSerializer.java
// public class CopyBookSerializer {
// private CopyBookMapper serializer;
//
// public CopyBookSerializer(Class<?> type) {
// this(type, false);
// }
//
// public CopyBookSerializer(Class<?> type, boolean debug) {
// this(type, null, debug);
// }
//
// public CopyBookSerializer(Class<?> type, Class<CopyBookMapper> mapper, boolean debug) {
// CopyBookParser parser = new CopyBookParser(type, debug);
// try {
// if(mapper != null) {
// serializer = mapper.getDeclaredConstructor().newInstance();
//
// } else {
// serializer = parser.getSerializerClass().getDeclaredConstructor().newInstance();
// }
// serializer.initialize(parser.getConfig());
//
// } catch (InstantiationException | IllegalAccessException | InvocationTargetException | NoSuchMethodException e) {
// throw new CopyBookException("Failed to load Serialization class("+ parser.getSerializerClass().getSimpleName() +")", e);
// }
// }
//
// public <T> byte[] serialize(T obj) {
// return serializer.serialize(obj);
// }
//
// public <T> T deserialize(byte[] bytes, Class<T> type) {
// return serializer.deserialize(bytes, type);
// }
//
// public <T> T deserialize(InputStream inputStream, Class<T> type) throws IOException {
// return deserialize(ByteUtils.toByteArray(inputStream), type);
// }
//
// public List<CopyBookException> getErrors() {
// return null; // TODO: Implement depending on errorValue
// }
//
// public int getMinRecordSize() {
// return serializer.getMinRecordSize();
// }
//
// public int getMaxRecordSize() {
// return serializer.getMaxRecordSize();
// }
//
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/CopyBookException.java
// public class CopyBookException extends RuntimeException {
// private static final long serialVersionUID = 28118369047109260L;
// public CopyBookException(String message) {
// super(message);
// }
//
// public CopyBookException(String message, TypeConverterException ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
//
// public CopyBookException(String message, Exception ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/serializers/CopyBookMapperFullTypeExceptionsTest.java
import com.nordea.oss.copybook.annotations.CopyBookLine;
import com.nordea.oss.copybook.CopyBookSerializer;
import com.nordea.oss.copybook.annotations.CopyBook;
import com.nordea.oss.copybook.exceptions.CopyBookException;
import org.junit.Rule;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class CopyBookMapperFullTypeExceptionsTest {
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@CopyBook(type = FullMapper.class)
static public class fieldTypeInteger {
@CopyBookLine("01 FIELD PIC 9(2).")
public int field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeString {
@CopyBookLine("01 FIELD PIC X(2).")
public String field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeDecimal {
@CopyBookLine("01 FIELD PIC 9(2)V9(2).")
public BigDecimal field;
}
@org.junit.Test
public void testRightFieldTypeInteger() throws Exception { | expectedEx.expect(CopyBookException.class); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/serializers/CopyBookMapperFullTypeExceptionsTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/CopyBookSerializer.java
// public class CopyBookSerializer {
// private CopyBookMapper serializer;
//
// public CopyBookSerializer(Class<?> type) {
// this(type, false);
// }
//
// public CopyBookSerializer(Class<?> type, boolean debug) {
// this(type, null, debug);
// }
//
// public CopyBookSerializer(Class<?> type, Class<CopyBookMapper> mapper, boolean debug) {
// CopyBookParser parser = new CopyBookParser(type, debug);
// try {
// if(mapper != null) {
// serializer = mapper.getDeclaredConstructor().newInstance();
//
// } else {
// serializer = parser.getSerializerClass().getDeclaredConstructor().newInstance();
// }
// serializer.initialize(parser.getConfig());
//
// } catch (InstantiationException | IllegalAccessException | InvocationTargetException | NoSuchMethodException e) {
// throw new CopyBookException("Failed to load Serialization class("+ parser.getSerializerClass().getSimpleName() +")", e);
// }
// }
//
// public <T> byte[] serialize(T obj) {
// return serializer.serialize(obj);
// }
//
// public <T> T deserialize(byte[] bytes, Class<T> type) {
// return serializer.deserialize(bytes, type);
// }
//
// public <T> T deserialize(InputStream inputStream, Class<T> type) throws IOException {
// return deserialize(ByteUtils.toByteArray(inputStream), type);
// }
//
// public List<CopyBookException> getErrors() {
// return null; // TODO: Implement depending on errorValue
// }
//
// public int getMinRecordSize() {
// return serializer.getMinRecordSize();
// }
//
// public int getMaxRecordSize() {
// return serializer.getMaxRecordSize();
// }
//
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/CopyBookException.java
// public class CopyBookException extends RuntimeException {
// private static final long serialVersionUID = 28118369047109260L;
// public CopyBookException(String message) {
// super(message);
// }
//
// public CopyBookException(String message, TypeConverterException ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
//
// public CopyBookException(String message, Exception ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
// }
| import com.nordea.oss.copybook.annotations.CopyBookLine;
import com.nordea.oss.copybook.CopyBookSerializer;
import com.nordea.oss.copybook.annotations.CopyBook;
import com.nordea.oss.copybook.exceptions.CopyBookException;
import org.junit.Rule;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class CopyBookMapperFullTypeExceptionsTest {
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@CopyBook(type = FullMapper.class)
static public class fieldTypeInteger {
@CopyBookLine("01 FIELD PIC 9(2).")
public int field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeString {
@CopyBookLine("01 FIELD PIC X(2).")
public String field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeDecimal {
@CopyBookLine("01 FIELD PIC 9(2)V9(2).")
public BigDecimal field;
}
@org.junit.Test
public void testRightFieldTypeInteger() throws Exception {
expectedEx.expect(CopyBookException.class);
expectedEx.expectMessage("Field to small for value"); | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/CopyBookSerializer.java
// public class CopyBookSerializer {
// private CopyBookMapper serializer;
//
// public CopyBookSerializer(Class<?> type) {
// this(type, false);
// }
//
// public CopyBookSerializer(Class<?> type, boolean debug) {
// this(type, null, debug);
// }
//
// public CopyBookSerializer(Class<?> type, Class<CopyBookMapper> mapper, boolean debug) {
// CopyBookParser parser = new CopyBookParser(type, debug);
// try {
// if(mapper != null) {
// serializer = mapper.getDeclaredConstructor().newInstance();
//
// } else {
// serializer = parser.getSerializerClass().getDeclaredConstructor().newInstance();
// }
// serializer.initialize(parser.getConfig());
//
// } catch (InstantiationException | IllegalAccessException | InvocationTargetException | NoSuchMethodException e) {
// throw new CopyBookException("Failed to load Serialization class("+ parser.getSerializerClass().getSimpleName() +")", e);
// }
// }
//
// public <T> byte[] serialize(T obj) {
// return serializer.serialize(obj);
// }
//
// public <T> T deserialize(byte[] bytes, Class<T> type) {
// return serializer.deserialize(bytes, type);
// }
//
// public <T> T deserialize(InputStream inputStream, Class<T> type) throws IOException {
// return deserialize(ByteUtils.toByteArray(inputStream), type);
// }
//
// public List<CopyBookException> getErrors() {
// return null; // TODO: Implement depending on errorValue
// }
//
// public int getMinRecordSize() {
// return serializer.getMinRecordSize();
// }
//
// public int getMaxRecordSize() {
// return serializer.getMaxRecordSize();
// }
//
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/CopyBookException.java
// public class CopyBookException extends RuntimeException {
// private static final long serialVersionUID = 28118369047109260L;
// public CopyBookException(String message) {
// super(message);
// }
//
// public CopyBookException(String message, TypeConverterException ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
//
// public CopyBookException(String message, Exception ex) {
// super(message + ": " + ex.getClass().getSimpleName() + " :" + ex.getMessage());
// }
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/serializers/CopyBookMapperFullTypeExceptionsTest.java
import com.nordea.oss.copybook.annotations.CopyBookLine;
import com.nordea.oss.copybook.CopyBookSerializer;
import com.nordea.oss.copybook.annotations.CopyBook;
import com.nordea.oss.copybook.exceptions.CopyBookException;
import org.junit.Rule;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class CopyBookMapperFullTypeExceptionsTest {
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@CopyBook(type = FullMapper.class)
static public class fieldTypeInteger {
@CopyBookLine("01 FIELD PIC 9(2).")
public int field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeString {
@CopyBookLine("01 FIELD PIC X(2).")
public String field;
}
@CopyBook(type = FullMapper.class)
static public class fieldTypeDecimal {
@CopyBookLine("01 FIELD PIC 9(2)V9(2).")
public BigDecimal field;
}
@org.junit.Test
public void testRightFieldTypeInteger() throws Exception {
expectedEx.expect(CopyBookException.class);
expectedEx.expectMessage("Field to small for value"); | CopyBookSerializer serializer = new CopyBookSerializer(fieldTypeInteger.class); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/DecimalToBigDecimalTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class DecimalToBigDecimalTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new DecimalToBigDecimal();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigDecimal.class, 10, -1);
}
@Test
public void testValidateTyopeFail() throws Exception { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/DecimalToBigDecimalTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.math.BigDecimal;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class DecimalToBigDecimalTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new DecimalToBigDecimal();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(BigDecimal.class, 10, -1);
}
@Test
public void testValidateTyopeFail() throws Exception { | expectedEx.expect(TypeConverterException.class); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToLongPostfixTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToLongPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0'); | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToLongPostfixTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToLongPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0'); | config.setSigningType(CopyBookFieldSigningType.POSTFIX); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToLongPostfixTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToLongPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.POSTFIX);
typeConverter = new SignedIntegerToLong();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(Long.TYPE, 2, -1);
}
| // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/SignedIntegerToLongPostfixTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToLongPostfixTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
config.setSigningType(CopyBookFieldSigningType.POSTFIX);
typeConverter = new SignedIntegerToLong();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(Long.TYPE, 2, -1);
}
| @Test(expected = TypeConverterException.class) |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/serializers/CopyBookFullLastArrayShortSerializerTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/CopyBookSerializer.java
// public class CopyBookSerializer {
// private CopyBookMapper serializer;
//
// public CopyBookSerializer(Class<?> type) {
// this(type, false);
// }
//
// public CopyBookSerializer(Class<?> type, boolean debug) {
// this(type, null, debug);
// }
//
// public CopyBookSerializer(Class<?> type, Class<CopyBookMapper> mapper, boolean debug) {
// CopyBookParser parser = new CopyBookParser(type, debug);
// try {
// if(mapper != null) {
// serializer = mapper.getDeclaredConstructor().newInstance();
//
// } else {
// serializer = parser.getSerializerClass().getDeclaredConstructor().newInstance();
// }
// serializer.initialize(parser.getConfig());
//
// } catch (InstantiationException | IllegalAccessException | InvocationTargetException | NoSuchMethodException e) {
// throw new CopyBookException("Failed to load Serialization class("+ parser.getSerializerClass().getSimpleName() +")", e);
// }
// }
//
// public <T> byte[] serialize(T obj) {
// return serializer.serialize(obj);
// }
//
// public <T> T deserialize(byte[] bytes, Class<T> type) {
// return serializer.deserialize(bytes, type);
// }
//
// public <T> T deserialize(InputStream inputStream, Class<T> type) throws IOException {
// return deserialize(ByteUtils.toByteArray(inputStream), type);
// }
//
// public List<CopyBookException> getErrors() {
// return null; // TODO: Implement depending on errorValue
// }
//
// public int getMinRecordSize() {
// return serializer.getMinRecordSize();
// }
//
// public int getMaxRecordSize() {
// return serializer.getMaxRecordSize();
// }
//
// }
| import com.nordea.oss.copybook.CopyBookSerializer;
import com.nordea.oss.copybook.annotations.CopyBook;
import com.nordea.oss.copybook.annotations.CopyBookLine;
import java.math.BigDecimal;
import static junit.framework.TestCase.assertEquals;
import static org.junit.Assert.assertArrayEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class CopyBookFullLastArrayShortSerializerTest {
@CopyBook(type = FullLastArrayShortMapper.class)
static public class StringFieldOccursTwoTimes {
@CopyBookLine("01 COUNT PIC 9.")
public int fields_count;
@CopyBookLine("01 FIELDS OCCURS 10 TIMES PIC X(4).")
public String[] fields;
}
@org.junit.Test
public void testStringFieldOccursTwoTimes() throws Exception { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/CopyBookSerializer.java
// public class CopyBookSerializer {
// private CopyBookMapper serializer;
//
// public CopyBookSerializer(Class<?> type) {
// this(type, false);
// }
//
// public CopyBookSerializer(Class<?> type, boolean debug) {
// this(type, null, debug);
// }
//
// public CopyBookSerializer(Class<?> type, Class<CopyBookMapper> mapper, boolean debug) {
// CopyBookParser parser = new CopyBookParser(type, debug);
// try {
// if(mapper != null) {
// serializer = mapper.getDeclaredConstructor().newInstance();
//
// } else {
// serializer = parser.getSerializerClass().getDeclaredConstructor().newInstance();
// }
// serializer.initialize(parser.getConfig());
//
// } catch (InstantiationException | IllegalAccessException | InvocationTargetException | NoSuchMethodException e) {
// throw new CopyBookException("Failed to load Serialization class("+ parser.getSerializerClass().getSimpleName() +")", e);
// }
// }
//
// public <T> byte[] serialize(T obj) {
// return serializer.serialize(obj);
// }
//
// public <T> T deserialize(byte[] bytes, Class<T> type) {
// return serializer.deserialize(bytes, type);
// }
//
// public <T> T deserialize(InputStream inputStream, Class<T> type) throws IOException {
// return deserialize(ByteUtils.toByteArray(inputStream), type);
// }
//
// public List<CopyBookException> getErrors() {
// return null; // TODO: Implement depending on errorValue
// }
//
// public int getMinRecordSize() {
// return serializer.getMinRecordSize();
// }
//
// public int getMaxRecordSize() {
// return serializer.getMaxRecordSize();
// }
//
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/serializers/CopyBookFullLastArrayShortSerializerTest.java
import com.nordea.oss.copybook.CopyBookSerializer;
import com.nordea.oss.copybook.annotations.CopyBook;
import com.nordea.oss.copybook.annotations.CopyBookLine;
import java.math.BigDecimal;
import static junit.framework.TestCase.assertEquals;
import static org.junit.Assert.assertArrayEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.serializers;
public class CopyBookFullLastArrayShortSerializerTest {
@CopyBook(type = FullLastArrayShortMapper.class)
static public class StringFieldOccursTwoTimes {
@CopyBookLine("01 COUNT PIC 9.")
public int fields_count;
@CopyBookLine("01 FIELDS OCCURS 10 TIMES PIC X(4).")
public String[] fields;
}
@org.junit.Test
public void testStringFieldOccursTwoTimes() throws Exception { | CopyBookSerializer serializer = new CopyBookSerializer(StringFieldOccursTwoTimes.class); |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedIntegerToInteger.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import com.nordea.oss.ByteUtils;
import java.util.Arrays; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToInteger extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedIntegerToInteger.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import com.nordea.oss.ByteUtils;
import java.util.Arrays;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToInteger extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) { | if(size > 10 && (this.signingType == CopyBookFieldSigningType.PREFIX || this.signingType == CopyBookFieldSigningType.POSTFIX)) { |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedIntegerToInteger.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import com.nordea.oss.ByteUtils;
import java.util.Arrays; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToInteger extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size > 10 && (this.signingType == CopyBookFieldSigningType.PREFIX || this.signingType == CopyBookFieldSigningType.POSTFIX)) { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedIntegerToInteger.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import com.nordea.oss.ByteUtils;
import java.util.Arrays;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToInteger extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size > 10 && (this.signingType == CopyBookFieldSigningType.PREFIX || this.signingType == CopyBookFieldSigningType.POSTFIX)) { | throw new TypeConverterException("int is not large enough to hold possible value"); |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedIntegerToInteger.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import com.nordea.oss.ByteUtils;
import java.util.Arrays; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToInteger extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size > 10 && (this.signingType == CopyBookFieldSigningType.PREFIX || this.signingType == CopyBookFieldSigningType.POSTFIX)) {
throw new TypeConverterException("int is not large enough to hold possible value");
}
if(size > 9 && (this.signingType == CopyBookFieldSigningType.LAST_BYTE_BIT8 || this.signingType == CopyBookFieldSigningType.LAST_BYTE_EBCDIC_BIT5)) {
throw new TypeConverterException("int is not large enough to hold possible value");
}
if(!(Integer.class.equals(type) || Integer.TYPE.equals(type))) {
throw new TypeConverterException("Only supports converting to and from int or Integer");
}
}
@Override
public Object to(byte[] bytes, int offset, int length, int decimals, boolean removePadding) { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/serializers/CopyBookFieldSigningType.java
// public enum CopyBookFieldSigningType {
// POSTFIX,
// PREFIX,
// LAST_BYTE_BIT8,
// LAST_BYTE_EBCDIC_BIT5
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedIntegerToInteger.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import com.nordea.oss.copybook.serializers.CopyBookFieldSigningType;
import com.nordea.oss.ByteUtils;
import java.util.Arrays;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedIntegerToInteger extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size > 10 && (this.signingType == CopyBookFieldSigningType.PREFIX || this.signingType == CopyBookFieldSigningType.POSTFIX)) {
throw new TypeConverterException("int is not large enough to hold possible value");
}
if(size > 9 && (this.signingType == CopyBookFieldSigningType.LAST_BYTE_BIT8 || this.signingType == CopyBookFieldSigningType.LAST_BYTE_EBCDIC_BIT5)) {
throw new TypeConverterException("int is not large enough to hold possible value");
}
if(!(Integer.class.equals(type) || Integer.TYPE.equals(type))) {
throw new TypeConverterException("Only supports converting to and from int or Integer");
}
}
@Override
public Object to(byte[] bytes, int offset, int length, int decimals, boolean removePadding) { | if(this.defaultValue != null && ByteUtils.allEquals(bytes, this.nullFillerByte, offset, bytes.length)) { // All of value is null filler |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/StringToTypeConverterStringEnumTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToTypeConverterStringEnumTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
public enum TestStringEnum implements TypeConverterStringEnum {
HIGH("HH"), MEDIUM("MM"), LOW("LL");
private final String value;
TestStringEnum(String value) {
this.value = value;
}
public String getValue() {
return value;
}
}
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new StringToTypeConverterStringEnum();
typeConverter.initialize(config);
typeConverter.validate(TestStringEnum.class, 2, 1);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(TestStringEnum.class, 2, -1);
}
| // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/StringToTypeConverterStringEnumTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToTypeConverterStringEnumTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
public enum TestStringEnum implements TypeConverterStringEnum {
HIGH("HH"), MEDIUM("MM"), LOW("LL");
private final String value;
TestStringEnum(String value) {
this.value = value;
}
public String getValue() {
return value;
}
}
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar('0');
typeConverter = new StringToTypeConverterStringEnum();
typeConverter.initialize(config);
typeConverter.validate(TestStringEnum.class, 2, 1);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(TestStringEnum.class, 2, -1);
}
| @Test(expected = TypeConverterException.class) |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/StringToLocalDateTime.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.time.LocalDateTime;
import java.time.format.DateTimeFormatter; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToLocalDateTime extends StringToString {
DateTimeFormatter formatter;
@Override
public void initialize(TypeConverterConfig config) {
super.initialize(config);
this.formatter = DateTimeFormatter.ofPattern(this.format);
}
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!(LocalDateTime.class.isAssignableFrom(type))) { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/StringToLocalDateTime.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.time.LocalDateTime;
import java.time.format.DateTimeFormatter;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToLocalDateTime extends StringToString {
DateTimeFormatter formatter;
@Override
public void initialize(TypeConverterConfig config) {
super.initialize(config);
this.formatter = DateTimeFormatter.ofPattern(this.format);
}
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!(LocalDateTime.class.isAssignableFrom(type))) { | throw new TypeConverterException("Only supports converting to and from an Enum that is or extends from LocalDateTime"); |
NordeaOSS/copybook4java | copybook4java/src/test/java/com/nordea/oss/copybook/converters/StringToStringTest.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.*; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToStringTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar(' ');
config.setNullFillerChar((char)0);
typeConverter = new StringToString();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(String.class, 2, -1);
}
| // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/test/java/com/nordea/oss/copybook/converters/StringToStringTest.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.ExpectedException;
import java.nio.charset.StandardCharsets;
import static org.junit.Assert.*;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToStringTest {
private TypeConverter typeConverter;
private TypeConverterConfig config;
@Rule
public ExpectedException expectedEx = ExpectedException.none();
@Before
public void runBeforeEveryTest() {
this.config = new TypeConverterConfig();
this.config.setCharset(StandardCharsets.UTF_8);
this.config.setPaddingChar(' ');
config.setNullFillerChar((char)0);
typeConverter = new StringToString();
typeConverter.initialize(config);
}
@Test
public void testValidateSuccess() throws Exception {
typeConverter.validate(String.class, 2, -1);
}
| @Test(expected = TypeConverterException.class) |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimal.java | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger;
import java.util.Arrays; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimal extends SignedIntegerToInteger {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!BigDecimal.class.equals(type)) { | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimal.java
import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger;
import java.util.Arrays;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimal extends SignedIntegerToInteger {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!BigDecimal.class.equals(type)) { | throw new TypeConverterException("Only supports converting to and from BigDecimal"); |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimal.java | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger;
import java.util.Arrays; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimal extends SignedIntegerToInteger {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!BigDecimal.class.equals(type)) {
throw new TypeConverterException("Only supports converting to and from BigDecimal");
}
}
@Override
public Object to(byte[] bytes, int offset, int length, int decimals, boolean removePadding) { | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/SignedDecimalToBigDecimal.java
import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger;
import java.util.Arrays;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class SignedDecimalToBigDecimal extends SignedIntegerToInteger {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!BigDecimal.class.equals(type)) {
throw new TypeConverterException("Only supports converting to and from BigDecimal");
}
}
@Override
public Object to(byte[] bytes, int offset, int length, int decimals, boolean removePadding) { | if(this.defaultValue != null && ByteUtils.allEquals(bytes, this.nullFillerByte, offset, bytes.length)) { // All of value is null filler |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/StringToTypeConverterStringEnum.java | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.util.HashMap;
import java.util.Map; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToTypeConverterStringEnum extends StringToString {
Class<?> type;
Object[] enumConstants;
Map<String,Object> toEnumMap = new HashMap<>();
Map<Object,byte[]> fromEnumMap = new HashMap<>();
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!(TypeConverterStringEnum.class.isAssignableFrom(type))) { | // Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/StringToTypeConverterStringEnum.java
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.util.HashMap;
import java.util.Map;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class StringToTypeConverterStringEnum extends StringToString {
Class<?> type;
Object[] enumConstants;
Map<String,Object> toEnumMap = new HashMap<>();
Map<Object,byte[]> fromEnumMap = new HashMap<>();
@Override
public void validate(Class<?> type, int size, int decimals) {
if(!(TypeConverterStringEnum.class.isAssignableFrom(type))) { | throw new TypeConverterException("Only supports converting to and from an Enum that implements TypeConverterStringEnum"); |
NordeaOSS/copybook4java | copybook4java-codegen-maven-plugin/src/main/java/com/nordea/oss/copybook/codegen/CopyBookConverter.java | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
| import com.nordea.oss.ByteUtils;
import jdk.nashorn.api.scripting.ScriptObjectMirror;
import javax.script.*;
import java.io.*;
import java.nio.charset.StandardCharsets;
import java.nio.file.*;
import java.util.*;
import java.util.regex.Matcher;
import java.util.regex.Pattern;
import java.util.stream.Collectors; | .collect(Collectors.toList());
} else if (inputFile.isFile()) {
inputFiles.add(inputFile);
}
for(File inFile : inputFiles) {
String packageName = inFile.getCanonicalFile().getParent().substring(inputPath.length()).replace('\\', '.').replace('/', '.').replace('_', '.');
packageName = packageName.isEmpty() ? packageRootName : packageRootName + "." + packageName.substring(1);
String rootClassName = getClassNameFromFile(inFile);
List<String> outClasses = convert(new FileInputStream(inFile), packageName, rootClassName, accessor, charset, subClassHandling, rootClassName);
for(String outClass : outClasses) {
Matcher classNameMatcher = re_className.matcher(outClass);
if (classNameMatcher.find()) {
String className = classNameMatcher.group(1);
Path outPath = Paths.get(outputPath, packageName.replace('.', '/'),className + ".java");
outPath.getParent().toFile().mkdirs();
System.out.println(" " + outPath);
Files.write(outPath, outClass.getBytes(StandardCharsets.UTF_8));
}
}
}
}
public List<String> convert(String copybookString, String packageName, String rootClassName, String accessor, String charset, String subClassHandling, String wrapperClassName) throws Exception {
ScriptObjectMirror results = (ScriptObjectMirror) invocable.invokeFunction("convertCopybook", packageName, rootClassName, copybookString, accessor, charset, subClassHandling, wrapperClassName);
return Arrays.asList(results.values().toArray(new String[results.size()]));
}
public List<String> convert(InputStream copybookStream, String packageName, String rootClassName, String accessor, String charset, String subClassHandling, String wrapperClassName) throws Exception { | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
// Path: copybook4java-codegen-maven-plugin/src/main/java/com/nordea/oss/copybook/codegen/CopyBookConverter.java
import com.nordea.oss.ByteUtils;
import jdk.nashorn.api.scripting.ScriptObjectMirror;
import javax.script.*;
import java.io.*;
import java.nio.charset.StandardCharsets;
import java.nio.file.*;
import java.util.*;
import java.util.regex.Matcher;
import java.util.regex.Pattern;
import java.util.stream.Collectors;
.collect(Collectors.toList());
} else if (inputFile.isFile()) {
inputFiles.add(inputFile);
}
for(File inFile : inputFiles) {
String packageName = inFile.getCanonicalFile().getParent().substring(inputPath.length()).replace('\\', '.').replace('/', '.').replace('_', '.');
packageName = packageName.isEmpty() ? packageRootName : packageRootName + "." + packageName.substring(1);
String rootClassName = getClassNameFromFile(inFile);
List<String> outClasses = convert(new FileInputStream(inFile), packageName, rootClassName, accessor, charset, subClassHandling, rootClassName);
for(String outClass : outClasses) {
Matcher classNameMatcher = re_className.matcher(outClass);
if (classNameMatcher.find()) {
String className = classNameMatcher.group(1);
Path outPath = Paths.get(outputPath, packageName.replace('.', '/'),className + ".java");
outPath.getParent().toFile().mkdirs();
System.out.println(" " + outPath);
Files.write(outPath, outClass.getBytes(StandardCharsets.UTF_8));
}
}
}
}
public List<String> convert(String copybookString, String packageName, String rootClassName, String accessor, String charset, String subClassHandling, String wrapperClassName) throws Exception {
ScriptObjectMirror results = (ScriptObjectMirror) invocable.invokeFunction("convertCopybook", packageName, rootClassName, copybookString, accessor, charset, subClassHandling, wrapperClassName);
return Arrays.asList(results.values().toArray(new String[results.size()]));
}
public List<String> convert(InputStream copybookStream, String packageName, String rootClassName, String accessor, String charset, String subClassHandling, String wrapperClassName) throws Exception { | return convert(new String(ByteUtils.toByteArray(copybookStream), StandardCharsets.UTF_8), packageName, rootClassName, accessor, charset, subClassHandling, wrapperClassName); |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/DecimalToBigDecimal.java | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class DecimalToBigDecimal extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size < 2) { | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/DecimalToBigDecimal.java
import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class DecimalToBigDecimal extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size < 2) { | throw new TypeConverterException("Field to small to hold a decimal number: " + size + " < 2"); |
NordeaOSS/copybook4java | copybook4java/src/main/java/com/nordea/oss/copybook/converters/DecimalToBigDecimal.java | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
| import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger; | /*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class DecimalToBigDecimal extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size < 2) {
throw new TypeConverterException("Field to small to hold a decimal number: " + size + " < 2");
}
if(!BigDecimal.class.equals(type)) {
throw new TypeConverterException("Only supports converting to and from BigDecimal");
}
}
@Override
public Object to(byte[] bytes, int offset, int length, int decimals, boolean removePadding) { | // Path: copybook4java/src/main/java/com/nordea/oss/ByteUtils.java
// public class ByteUtils {
//
// public static boolean allEquals(byte[] array, byte value, int offset, int maxLength) {
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] != value) {
// return false;
// }
// }
// return true;
// }
//
// public static int indexOf(byte[] array, byte needle, int offset, int maxLength) {
// int result = -1;
// maxLength = Math.min(offset + maxLength, array.length);
// for(int i = offset; i < maxLength; i++) {
// if(array[i] == needle) {
// result = i;
// break;
// }
// }
// return result;
// }
//
// public static byte[] trim(byte[] src, byte padding, boolean right, int minLength) {
// if(src.length < minLength) {
// throw new RuntimeException("src array is smaller than minLength: " + src.length + " < " + minLength);
// }
// if(right) {
// int offset;
// for (offset = src.length - 1; offset > minLength - 1; offset--) { // [44, 32]
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset < 0) {
// return new byte[0];
// } else if (offset < src.length - 1){
// return Arrays.copyOfRange(src, 0, offset + 1);
// }
//
// } else {
// int offset;
// for (offset = 0; offset < src.length - minLength; offset++) {
// if(padding != src[offset]) {
// break;
// }
// }
// if(offset == src.length) {
// return new byte[0];
// } else if(offset > 0) {
// return Arrays.copyOfRange(src, offset, src.length);
// }
// }
//
// return src;
// }
//
// public static byte[] toByteArray(InputStream inputStream) throws IOException {
// ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
//
// byte[] buf = new byte[8192];
// while(true) {
// int r = inputStream.read(buf);
// if(r == -1) {
// break;
// }
// outputStream.write(buf, 0, r);
// }
//
// return outputStream.toByteArray();
// }
// }
//
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/exceptions/TypeConverterException.java
// public class TypeConverterException extends RuntimeException {
// private static final long serialVersionUID = -7577535992947276304L;
// public TypeConverterException(String message) {
// super(message);
// }
// }
// Path: copybook4java/src/main/java/com/nordea/oss/copybook/converters/DecimalToBigDecimal.java
import com.nordea.oss.ByteUtils;
import com.nordea.oss.copybook.exceptions.TypeConverterException;
import java.math.BigDecimal;
import java.math.BigInteger;
/*
* Copyright (c) 2015. Troels Liebe Bentsen <[email protected]>
* Copyright (c) 2016. Nordea Bank AB
* Licensed under the MIT license (LICENSE.txt)
*/
package com.nordea.oss.copybook.converters;
public class DecimalToBigDecimal extends TypeConverterBase {
@Override
public void validate(Class<?> type, int size, int decimals) {
if(size < 2) {
throw new TypeConverterException("Field to small to hold a decimal number: " + size + " < 2");
}
if(!BigDecimal.class.equals(type)) {
throw new TypeConverterException("Only supports converting to and from BigDecimal");
}
}
@Override
public Object to(byte[] bytes, int offset, int length, int decimals, boolean removePadding) { | if(this.defaultValue != null && ByteUtils.allEquals(bytes, this.nullFillerByte, offset, bytes.length)) { // All of value is null filler |
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