thepurpleowl/codequeries · Datasets at Hugging Face

query_name stringlengths 13 55	code_file_path stringlengths 14 194	context_blocks list	answer_spans list	supporting_fact_spans list	example_type int8 0 1	single_hop bool 2 classes	subtokenized_input_sequence list	label_sequence list
Unused local variable	deanhiller/databus/webapp/play1.3.x/python/Lib/posixpath.py	[ { "content": "def lexists(path):\n \"\"\"Test whether a path exists. Returns True for broken symbolic links\"\"\"\n try:\n st = os.lstat(path)\n except os.error:\n return False\n return True", "metadata": "root.lexists", "header": "['module', '___EOS___']", "index": 138 } ]	[ { "span": "st ", "start_line": 141, "start_column": 8, "end_line": 141, "end_column": 10 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "lexi", "sts_", "(_", "path_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "Test", " ", "whe", "ther", " ", "a", " ", "path", " ", "exist", "s", ".", " ", " ", "Return", "s", " ", "Tru", "e", " ", "for", " ", "broken", " ", "symbolic", " ", "link", "s", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "st_", "=_", "os_", "._", "lsta", "t_", "(_", "path_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "os_", "._", "error_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "return_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "True_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Testing equality to None	tucker777/QSTK/qstklearn/kdtknn.py	[ { "content": " def addEvidence(self,dataX,dataY=None):\n \"\"\"\n @summary: Add training data\n @param dataX: Data to add, either entire set with classification as last column, or not if\n the Y data is provided explicitly. Must be same width as previously appended data.\n @param dataY: Optional, can be used \n \n 'data' should be a numpy array matching the same dimensions as any data \n provided in previous calls to addEvidence, with dataY as the \n training label.\n \"\"\"\n \n ''' Slap on Y column if it is provided, if not assume it is there '''\n if not dataY == None:\n data = numpy.zeros([dataX.shape[0],dataX.shape[1]+1])\n data[:,0:dataX.shape[1]]=dataX\n data[:,(dataX.shape[1])]=dataY\n else:\n data = dataX\n \n self.rebuild_tree = True\n if self.data is None:\n self.data = data\n else:\n self.data = numpy.append(self.data,data,axis=0)", "metadata": "root.kdtknn.addEvidence", "header": "['class', 'kdtknn', '(', 'object', ')', ':', '___EOS___']", "index": 34 } ]	[ { "span": "dataY == None:", "start_line": 47, "start_column": 15, "end_line": 47, "end_column": 28 } ]	[]	1	true	[ "[CLS]_", "Test", "ing_", "equality", "_", "to_", "None_", "[SEP]_", "class_", "kd", "tk", "nn_", "(_", "object_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "add", "Evi", "denc", "e_", "(_", "self_", ",_", "data", "X_", ",_", "data", "Y_", "=_", "None_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "@", "summar", "y", ":", " ", "Add", " ", "train", "ing", " ", "data", "\\", "10", ";", " ", " ", " ", " ", "@", "param", " ", "data", "X", ":", " ", "Data", " ", "to", " ", "add", ",", " ", "eit", "her", " ", "entire", " ", "set", " ", "with", " ", "classificati", "on", " ", "as", " ", "last", " ", "column", ",", " ", "or", " ", "not", " ", "if", "\\", "10", ";", " ", " ", " ", " ", "the", " ", "Y", " ", "data", " ", "is", " ", "provided", " ", "explicit", "ly", ".", " ", " ", "Mus", "t", " ", "be", " ", "same", " ", "widt", "h", " ", "as", " ", "previ", "ously", " ", "append", "ed", " ", "data", ".", "\\", "10", ";", " ", " ", " ", " ", "@", "param", " ", "data", "Y", ":", " ", "Optio", "nal", ",", " ", "can", " ", "be", " ", "used", " ", "\\", "10", ";", " ", " ", " ", " ", "\\", "10", ";", " ", " ", " ", " ", "'", "data", "'", " ", "shou", "ld", " ", "be", " ", "a", " ", "nump", "y", " ", "array", " ", "matchi", "ng", " ", "the", " ", "same", " ", "dimension", "s", " ", "as", " ", "any", " ", "data", " ", "\\", "10", ";", " ", " ", " ", " ", "provided", " ", "in", " ", "previ", "ous", " ", "calls", " ", "to", " ", "add", "Evi", "denc", "e", ",", " ", "with", " ", "data", "Y", " ", "as", " ", "the", " ", "\\", "10", ";", " ", " ", " ", " ", "train", "ing", " ", "label", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "'''", " ", "Sla", "p", " ", "on", " ", "Y", " ", "column", " ", "if", " ", "it", " ", "is", " ", "provided", ",", " ", "if", " ", "not", " ", "assume", " ", "it", " ", "is", " ", "there", " ", "'''_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "not_", "data", "Y_", "==_", "None_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "data_", "=_", "numpy_", "._", "zeros_", "(_", "[_", "data", "X_", "._", "shape_", "[_", "0_", "]_", ",_", "data", "X_", "._", "shape_", "[_", "1_", "]_", "+_", "1_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "data_", "[_", ":_", ",_", "0_", ":_", "data", "X_", "._", "shape_", "[_", "1_", "]_", "]_", "=_", "data", "X_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "data_", "[_", ":_", ",_", "(_", "data", "X_", "._", "shape_", "[_", "1_", "]_", ")_", "]_", "=_", "data", "Y_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "data_", "=_", "data", "X_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "self_", "._", "rebu", "ild", "\\u", "tree_", "=_", "True_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "self_", "._", "data_", "is_", "None_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "data_", "=_", "data_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "data_", "=_", "numpy_", "._", "append_", "(_", "self_", "._", "data_", ",_", "data_", ",_", "axis_", "=_", "0_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unnecessary pass	hwaf/hwaf/py-hwaftools/find_iberty.py	[ { "content": "@conf\ndef find_iberty(ctx, kwargs):\n \n ctx.load('hwaf-base', tooldir=_heptooldir)\n\n if not ctx.env.HWAF_FOUND_C_COMPILER:\n ctx.fatal('load a C compiler first')\n pass\n\n if not ctx.env.HWAF_FOUND_GDB:\n # gdb might have installed interesting libs (iberty, bfd)\n ctx.find_gdb(mandatory=False)\n pass\n \n extra_paths = waflib.Utils.to_list(kwargs.get('extra_paths',[]))\n if ctx.env.GDB_HOME:\n gdb = ctx.hwaf_subst_vars('${GDB_HOME}')\n extra_paths.append(gdb)\n pass\n\n # find libiberty\n ctx.check_with(\n ctx.check,\n \"iberty\",\n features='c cstlib',\n header_name=\"libiberty.h\",\n stlib='iberty',\n uselib_store='iberty',\n kwargs\n )\n \n if ctx.env.LIBPATH_iberty and 0:\n ctx.env.STLIBPATH_iberty = ctx.env.LIBPATH_iberty\n ctx.env.STLIB_iberty = ctx.env.LIB_iberty\n ctx.env.LIB_iberty = []\n ctx.env.LIBPATH_iberty = []\n pass\n\n ctx.env.HWAF_FOUND_IBERTY = 1\n return", "metadata": "root.find_iberty", "header": "['module', '___EOS___']", "index": 24 } ]	[ { "span": "pass", "start_line": 31, "start_column": 8, "end_line": 31, "end_column": 12 }, { "span": "pass", "start_line": 36, "start_column": 8, "end_line": 36, "end_column": 12 }, { "span": "pass", "start_line": 42, "start_column": 8, "end_line": 42, "end_column": 12 }, { "span": "pass", "start_line": 60, "start_column": 8, "end_line": 60, "end_column": 12 } ]	[]	1	true	[ "[CLS]_", "Un", "necessar", "y_", "pass_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "@_", "conf_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "def_", "find", "\\u", "ibe", "rty", "_", "(_", "ctx_", ",_", "_", "kwargs_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "ctx_", "._", "load_", "(_", "'", "hwa", "f", "-", "base", "'_", ",_", "tool", "dir_", "=_", "\\u", "hep", "tool", "dir_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "if_", "not_", "ctx_", "._", "env_", "._", "HW", "AF", "\\u", "FO", "UND", "\\u", "C", "\\u", "COMPILER", "_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "ctx_", "._", "fatal_", "(_", "'", "load", " ", "a", " ", "C", " ", "compiler", " ", "first", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "not_", "ctx_", "._", "env_", "._", "HW", "AF", "\\u", "FO", "UND", "\\u", "GD", "B_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "gdb", " ", "mig", "ht", " ", "have", " ", "install", "ed", " ", "interesting", " ", "libs", " ", "(", "ibe", "rty", ",", " ", "bf", "d", ")_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "ctx_", "._", "find", "\\u", "gdb_", "(_", "mandatory_", "=_", "False_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "extra", "\\u", "paths_", "=_", "waf", "lib_", "._", "Utils_", "._", "to", "\\u", "list_", "(_", "kwargs_", "._", "get_", "(_", "'", "extra", "\\u", "path", "s", "'_", ",_", "[_", "]_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "ctx_", "._", "env_", "._", "GD", "B", "\\u", "HOME_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "gdb_", "=_", "ctx_", "._", "hwa", "f", "\\u", "subst", "\\u", "vars_", "(_", "'$", "{", "GD", "B", "\\u", "HOM", "E", "}'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "extra", "\\u", "paths_", "._", "append_", "(_", "gdb_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "find", " ", "lib", "ibe", "rty", "_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "ctx_", "._", "check", "\\u", "with_", "(_", "\\u\\u\\uNL\\u\\u\\u_", "ctx_", "._", "check_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "ibe", "rty", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "features_", "=_", "'", "c", " ", "cst", "lib", "'_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "header", "\\u", "name_", "=_", "\"", "lib", "ibe", "rty", ".", "h", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "stl", "ib_", "=_", "'", "ibe", "rty", "'_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "usel", "ib", "\\u", "store_", "=_", "'", "ibe", "rty", "'_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "_", "kwargs_", "\\u\\u\\uNL\\u\\u\\u_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "if_", "ctx_", "._", "env_", "._", "LIB", "PATH", "\\u", "ibe", "rty", "_", "and_", "0_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "ctx_", "._", "env_", "._", "STL", "IB", "PATH", "\\u", "ibe", "rty", "_", "=_", "ctx_", "._", "env_", "._", "LIB", "PATH", "\\u", "ibe", "rty", "_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "ctx_", "._", "env_", "._", "STL", "IB", "\\u", "ibe", "rty", "_", "=_", "ctx_", "._", "env_", "._", "LIB", "\\u", "ibe", "rty", "_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "ctx_", "._", "env_", "._", "LIB", "\\u", "ibe", "rty", "_", "=_", "[_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "ctx_", "._", "env_", "._", "LIB", "PATH", "\\u", "ibe", "rty", "_", "=_", "[_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "ctx_", "._", "env_", "._", "HW", "AF", "\\u", "FO", "UND", "\\u", "IB", "ERT", "Y_", "=_", "1_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "return_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	saltstack/salt/tests/unit/pyobjects_test.py	[ { "content": " def test_import_scope(self):\n self.write_template_file(\"map.sls\", map_template)\n self.write_template_file(\"recursive_map.sls\", recursive_map_template)\n\n def do_render():\n ret = self.render(scope_test_import_template,\n {'grains': {\n 'os_family': 'Debian',\n 'os': 'Debian'\n }})\n\n self.assertRaises(NameError, do_render)", "metadata": "root.RendererTests.test_import_scope", "header": "['class', 'RendererTests', '(', 'RendererMixin', ',', 'StateTests', ')', ':', '___EOS___']", "index": 349 }, { "content": " def test_random_password(self):\n '''Test for https://github.com/saltstack/salt/issues/21796'''\n ret = self.render(random_password_template)", "metadata": "root.RendererTests.test_random_password", "header": "['class', 'RendererTests', '(', 'RendererMixin', ',', 'StateTests', ')', ':', '___EOS___']", "index": 362 }, { "content": " def test_import_random_password(self):\n '''Import test for https://github.com/saltstack/salt/issues/21796'''\n self.write_template_file(\"password.sls\", random_password_template)\n ret = self.render(random_password_import_template)", "metadata": "root.RendererTests.test_import_random_password", "header": "['class', 'RendererTests', '(', 'RendererMixin', ',', 'StateTests', ')', ':', '___EOS___']", "index": 366 } ]	[ { "span": "ret ", "start_line": 354, "start_column": 12, "end_line": 354, "end_column": 15 }, { "span": "ret ", "start_line": 364, "start_column": 8, "end_line": 364, "end_column": 11 }, { "span": "ret ", "start_line": 369, "start_column": 8, "end_line": 369, "end_column": 11 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", "Render", "er", "Tests_", "(_", "Render", "er", "Mixin_", ",_", "State", "Tests_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "import", "\\u", "scope_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", 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Unused import	fp7-ofelia/ocf/expedient/doc/plugins/samples/plugin/sample_resource/controller/GUIdispatcher.py	[ { "content": "\"\"\"\nGraphical user interface functionalities for the\nSampleResource Aggregate Manager.\n\n@date: Jun 12, 2013\n@author: CarolinaFernandez\n\"\"\"\n\nfrom django.core.exceptions import ValidationError\nfrom django.core.urlresolvers import reverse\nfrom django.http import HttpResponseRedirect, HttpResponse\nfrom django.shortcuts import get_object_or_404\nfrom expedient.clearinghouse.aggregate.models import Aggregate\nfrom expedient.clearinghouse.slice.models import Slice\nfrom expedient.common.messaging.models import DatedMessage\nfrom expedient.common.utils.plugins.plugincommunicator import *\nfrom expedient.common.utils.plugins.resources.link import Link\nfrom expedient.common.utils.plugins.resources.node import Node\nfrom expedient.common.utils.views import generic_crud\nfrom sample_resource.controller.resource import SampleResource as SampleResourceController\nfrom sample_resource.forms.SampleResource import SampleResource as SampleResourceModelForm\nfrom sample_resource.models import SampleResource as SampleResourceModel,\\\n SampleResourceAggregate as SampleResourceAggregateModel\n\nimport copy\nimport logging\nimport xmlrpclib\n\n\n\n\n###\n# Topology to show in the Expedient\n#\n\n\n\n\n\n#from expedient.common.utils.plugins.plugininterface import PluginInterface\n#\n#class Plugin(PluginInterface):\n# @staticmethod\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def create_resource(request, slice_id, agg_id):\n \"\"\"Show a page that allows user to add a SampleResource to the aggregate.\"\"\"\n\n if request.method == \"POST\":\n # Shows error message when aggregate unreachable, disable SampleResource creation and get back to slice detail page\n agg = Aggregate.objects.get(id = agg_id)\n if agg.check_status() == False:\n DatedMessage.objects.post_message_to_user(\n \"SampleResource Aggregate '%s' is not available\" % agg.name,\n request.user, msg_type=DatedMessage.TYPE_ERROR,)\n return HttpResponseRedirect(reverse(\"slice_detail\", args=[slice_id]))\n\n if 'create_resource' in request.POST:\n return HttpResponseRedirect(reverse(\"sample_resource_resource_crud\", args=[slice_id, agg_id]))\n else:\n return HttpResponseRedirect(reverse(\"slice_detail\", args=[slice_id]))", "metadata": "root.create_resource", "header": "['module', '___EOS___']", "index": 28 }, { "content": "def resource_crud(request, slice_id, agg_id, resource_id = None):\n \"\"\"\n Show a page that allows user to create/edit SampleResource's to the Aggregate.\n \"\"\"\n slice = get_object_or_404(Slice, id = slice_id)\n aggregate = Aggregate.objects.get(id = agg_id)\n error_crud = \"\"\n\n def pre_save(instance, created):\n \"\"\"\n Fills SampleResource instance prior to its saving.\n Used within the scope of the generic_crud method.\n \"\"\"\n instance = SampleResourceController.fill(instance, slice, agg_id, resource_id)\n\n try:\n return generic_crud(request, obj_id=resource_id, model=SampleResourceModel,\n form_class=SampleResourceModelForm,\n template=\"sample_resource_resource_crud.html\",\n redirect=lambda inst: reverse(\"slice_detail\", args=[slice_id]),\n extra_context={\"agg\": aggregate, \"slice\": slice, \"exception\": error_crud, \"breadcrumbs\": (\n (\"Home\", reverse(\"home\")),\n (\"Project %s\" % slice.project.name, reverse(\"project_detail\", args=[slice.project.id])),\n (\"Slice %s\" % slice.name, reverse(\"slice_detail\", args=[slice_id])),\n (\"%s SampleResource\" % \"Update\" if resource_id else \"Create\", reverse(\"sample_resource_resource_crud\", args=[slice_id, agg_id])),)\n }, extra_form_params={}, template_object_name=\"object\", pre_save=pre_save,\n post_save=None, success_msg=None)\n except ValidationError as e:\n # Django exception message handling is different to Python's...\n error_crud = \";\".join(e.messages)\n except Exception as e:\n print \"[WARNING] Could not create resource in plugin 'sample_resource'. Details: %s\" % str(e)\n DatedMessage.objects.post_message_to_user(\n \"SampleResource might have been created, but some problem ocurred: %s\" % str(e),\n request.user, msg_type=DatedMessage.TYPE_ERROR)\n return HttpResponseRedirect(reverse(\"slice_detail\", args=[slice_id]))", "metadata": "root.resource_crud", "header": "['module', '___EOS___']", "index": 45 }, { "content": "def manage_resource(request, resource_id, action_type):\n \"\"\"\n Manages the actions executed over SampleResource's.\n \"\"\"\n if action_type == \"delete\":\n SampleResourceController.delete(resource_id)\n # Go to manage resources again\n return HttpResponse(\"\")", "metadata": "root.manage_resource", "header": "['module', '___EOS___']", "index": 82 }, { "content": "def get_sr_list(slice):\n return SampleResourceModel.objects.filter(slice_id = slice.uuid)", "metadata": "root.get_sr_list", "header": "['module', '___EOS___']", "index": 95 }, { "content": "def get_sr_aggregates(slice):\n sr_aggs = []\n try:\n sr_aggs = slice.aggregates.filter(leaf_name=SampleResourceAggregateModel.__name__.lower())\n except:\n pass\n return sr_aggs", "metadata": "root.get_sr_aggregates", "header": "['module', '___EOS___']", "index": 98 }, { "content": "def get_node_description(node):\n description = \"<strong>Sample Resource: \" + node.name + \"</strong><br/><br/>\"\n description += \" Temperature: %s (°%s)\" % (str(node.get_temperature()), str(node.get_temperature_scale()))\n connections = \"\"\n node_connections = node.get_connections()\n for i, connection in enumerate(node_connections):\n connections += connection.name\n if i < len(node_connections)-1:\n connections += \", \"\n description += \"<br/> Connected to: %s\" % str(connections)\n return description", "metadata": "root.get_node_description", "header": "['module', '___EOS___']", "index": 106 }, { "content": "def get_nodes_links(slice, chosen_group=None):\n nodes = []\n links = []\n sr_aggs = get_sr_aggregates(slice)\n\n # Getting image for the nodes\n # FIXME: avoid to ask the user for the complete name of the method here! he should NOT know it\n try:\n image_url = reverse('img_media_sample_resource', args=(\"sensor-tiny.png\",))\n except:\n image_url = 'sensor-tiny.png'\n\n # For every SampleResource AM\n for i, sr_agg in enumerate(sr_aggs):\n sr_agg = sr_agg.sampleresourceaggregate\n # Iterates over every SampleResource contained within the slice\n for sr in sr_agg.get_resources():\n sr = sr.sampleresource\n nodes.append(Node(\n # Users shall not be left the choice to choose group/island; otherwise collision may arise\n name = sr.name, value = sr.id, aggregate = sr.aggregate, type = \"Sample resource\",\n description = get_node_description(sr), image = image_url)\n )\n for connection in sr.get_connections():\n # Two-ways link\n links.append(\n Link(\n target = str(sr.id), source = str(connection.id),\n value = \"rsc_id_%s-rsc_id_%s\" % (connection.id, sr.id)\n ),\n )\n links.append(\n Link(\n target = str(sr.id), source = str(connection.id),\n value = \"rsc_id_%s-rsc_id_%s\" % (sr.id, connection.id)\n ),\n )\n return [nodes, links]", "metadata": "root.get_nodes_links", "header": "['module', '___EOS___']", "index": 118 }, { "content": "def get_ui_data(slice):\n \"\"\"\n Hook method. Use this very same name so Expedient can get the resources for every plugin.\n \"\"\"\n ui_context = dict()\n try:\n ui_context['sr_list'] = get_sr_list(slice)\n ui_context['sr_aggs'] = get_sr_aggregates(slice)\n ui_context['nodes'], ui_context['links'] = get_nodes_links(slice)\n except Exception as e:\n print \"[ERROR] Problem loading UI data for plugin 'sample_resource'. Details: %s\" % str(e)\n return ui_context", "metadata": "root.get_ui_data", "header": "['module', '___EOS___']", "index": 161 } ]	[ { "span": "import copy", "start_line": 24, "start_column": 0, "end_line": 24, "end_column": 11 }, { "span": "import logging", "start_line": 25, "start_column": 0, "end_line": 25, "end_column": 14 }, { "span": "import xmlrpclib", "start_line": 26, "start_column": 0, "end_line": 26, "end_column": 16 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\"\"\"", "\\", "10", ";", "Graphic", "al", " ", "user", " ", "interface", " ", "functional", "iti", "es", " ", "for", " ", "the", "\\", "10", ";", "Sampl", "e", "Reso", "urc", "e", " ", "Aggregate", " ", "Manager", ".", "\\", "10", ";", "\\", "10", ";", "@", "date", ":", " ", "Jun", " ", "1", "2", ",", " ", "2013", "\\", "10", ";", "@", "author", ":", " ", "Carol", "ina", "Fer", "nand", "ez", "\\", "10", ";\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", 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Imprecise assert	adlnet/ADL_LRS/lrs/tests/test_AgentManager.py	[ { "content": " def test_agent_format(self):\n ot_s = \"Agent\"\n name_s = \"superman\"\n mbox_s = \"mailto:[email protected]\"\n kwargs_s = {\"objectType\":ot_s,\"name\":name_s,\"mbox\":mbox_s}\n clark, created = Agent.objects.retrieve_or_create(kwargs_s)\n self.assertTrue(created)\n clark.save()\n self.assertEquals(clark.objectType, ot_s)\n self.assertEquals(clark.name, name_s)\n self.assertEquals(clark.mbox, mbox_s)\n\n clark_exact = clark.to_dict()\n self.assertEquals(clark_exact['objectType'], ot_s)\n self.assertEquals(clark_exact['name'], name_s)\n self.assertEquals(clark_exact['mbox'], mbox_s)\n\n clark_ids = clark.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(clark_ids), \"object type was found in agent json\")\n self.assertFalse('name' in str(clark_ids), \"name was found in agent json\")\n self.assertEquals(clark_ids['mbox'], mbox_s)\n\n ot_ww = \"Agent\"\n name_ww = \"wonder woman\"\n mbox_sha1sum_ww = hashlib.sha1(\"mailto:[email protected]\").hexdigest()\n kwargs_ww = {\"objectType\":ot_ww,\"name\":name_ww,\"mbox_sha1sum\":mbox_sha1sum_ww}\n diana, created = Agent.objects.retrieve_or_create(kwargs_ww)\n self.assertTrue(created)\n diana.save()\n self.assertEquals(diana.objectType, ot_ww)\n self.assertEquals(diana.name, name_ww)\n self.assertEquals(diana.mbox_sha1sum, mbox_sha1sum_ww)\n\n diana_exact = diana.to_dict()\n self.assertEquals(diana_exact['objectType'], ot_ww)\n self.assertEquals(diana_exact['name'], name_ww)\n self.assertEquals(diana_exact['mbox_sha1sum'], mbox_sha1sum_ww)\n\n diana_ids = diana.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(diana_ids), \"object type was found in agent json\")\n self.assertFalse('name' in str(diana_ids), \"name was found in agent json\")\n self.assertFalse('mbox' in diana_ids.items(), \"mbox was found in agent json\")\n self.assertEquals(diana_ids['mbox_sha1sum'], mbox_sha1sum_ww)\n\n ot_b = \"Agent\"\n name_b = \"batman\"\n openid_b = \"id:batman\"\n kwargs_b = {\"objectType\":ot_b,\"name\":name_b,\"openid\":openid_b}\n bruce, created = Agent.objects.retrieve_or_create(kwargs_b)\n self.assertTrue(created)\n bruce.save()\n self.assertEquals(bruce.objectType, ot_b)\n self.assertEquals(bruce.name, name_b)\n self.assertEquals(bruce.openid, openid_b)\n\n bruce_exact = bruce.to_dict()\n self.assertEquals(bruce_exact['objectType'], ot_b)\n self.assertEquals(bruce_exact['name'], name_b)\n self.assertEquals(bruce_exact['openid'], openid_b)\n\n bruce_ids = bruce.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(bruce_ids), \"object type was found in agent json\")\n self.assertFalse('name' in str(bruce_ids), \"name was found in agent json\")\n self.assertFalse('mbox' in str(bruce_ids), \"mbox was found in agent json\")\n self.assertFalse('mbox_sha1sum' in str(bruce_ids), \"mbox_sha1sum was found in agent json\")\n self.assertEquals(bruce_ids['openid'], openid_b)\n\n ot_f = \"Agent\"\n name_f = \"the flash\"\n account_f = {\"homePage\":\"http://ultrasecret.justiceleague.com/accounts/\", \"name\":\"theflash\"}\n kwargs_f = {\"objectType\":ot_f,\"name\":name_f,\"account\":account_f}\n barry, created = Agent.objects.retrieve_or_create(kwargs_f)\n self.assertTrue(created)\n barry.save()\n self.assertEquals(barry.objectType, ot_f)\n self.assertEquals(barry.name, name_f)\n self.assertEquals(barry.account_homePage, account_f['homePage'])\n self.assertEquals(barry.account_name, account_f['name'])\n\n barry_exact = barry.to_dict()\n self.assertEquals(barry_exact['objectType'], ot_f)\n self.assertEquals(barry_exact['name'], name_f)\n self.assertEquals(barry_exact['account']['homePage'], account_f['homePage'])\n self.assertEquals(barry_exact['account']['name'], account_f['name'])\n\n barry_ids = barry.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(barry_ids), \"object type was found in agent json\")\n self.assertFalse('name' in barry_ids.items(), \"name was found in agent json\")\n self.assertFalse('mbox' in barry_ids.items(), \"mbox was found in agent json\")\n self.assertFalse('mbox_sha1sum' in str(barry_ids), \"mbox_sha1sum was found in agent json\")\n self.assertFalse('openid' in str(barry_ids), \"openid was found in agent json\")\n self.assertEquals(barry_ids['account']['homePage'], account_f['homePage'])\n self.assertEquals(barry_ids['account']['name'], account_f['name'])\n\n ot_j = \"Group\"\n name_j = \"Justice League\"\n mbox_j = \"mailto:[email protected]\"\n kwargs_j = {\"objectType\":ot_j,\"name\":name_j,\"mbox\":mbox_j, \"member\":[kwargs_s,kwargs_ww,kwargs_f,kwargs_b]}\n justiceleague, created = Agent.objects.retrieve_or_create(kwargs_j)\n self.assertTrue(created)\n justiceleague.save()\n self.assertEquals(justiceleague.objectType, ot_j)\n self.assertEquals(justiceleague.name, name_j)\n self.assertEquals(justiceleague.mbox, mbox_j)\n\n justiceleague_exact = justiceleague.to_dict()\n self.assertEquals(justiceleague_exact['objectType'], ot_j)\n self.assertEquals(justiceleague_exact['name'], name_j)\n self.assertEquals(justiceleague_exact['mbox'], mbox_j)\n\n justiceleague_ids = justiceleague.to_dict(ids_only=True)\n self.assertTrue('objectType' in str(justiceleague_ids), \"object type was not found in group json\")\n self.assertFalse('name' in str(justiceleague_ids), \"name was found in agent json\")\n self.assertEquals(justiceleague_ids['mbox'], mbox_j)\n\n badguy_ds = {\"objectType\":\"Agent\", \"mbox\":\"mailto:[email protected]\", \"name\":\"Darkseid\"}\n badguy_m = {\"objectType\":\"Agent\", \"mbox\":\"mailto:[email protected]\", \"name\":\"Mantis\"}\n\n ot_bg = \"Group\"\n members_bg = [badguy_ds, badguy_m]\n kwargs_bg = {\"objectType\":ot_bg,\"member\":members_bg}\n badguys, created = Agent.objects.retrieve_or_create(kwargs_bg)\n self.assertTrue(created)\n badguys.save()\n self.assertEquals(badguys.objectType, ot_bg)\n bg_members = badguys.member.all()\n self.assertEquals(len(bg_members), 2)\n for bg in bg_members:\n self.assertTrue(bg.name in str(kwargs_bg['member']))\n\n badguys_exact = badguys.to_dict()\n self.assertEquals(badguys_exact['objectType'], ot_bg)\n for m in badguys_exact['member']:\n if m['name'] == badguy_ds['name']:\n self.assertEquals(m['objectType'], badguy_ds['objectType'])\n self.assertEquals(m['mbox'], badguy_ds['mbox'])\n elif m['name'] == badguy_m['name']:\n self.assertEquals(m['objectType'], badguy_m['objectType'])\n self.assertEquals(m['mbox'], badguy_m['mbox'])\n else:\n self.fail(\"got an unexpected name: \" % m['name'])\n\n badguys_ids = badguys.to_dict(ids_only=True)\n self.assertTrue('objectType' in str(badguys_ids), \"object type was not found in group json\")\n for m in badguys_ids['member']:\n self.assertFalse('objectType' in str(m), \"object type was found in member agent\")\n self.assertFalse('name' in str(m), \"name was found in member agent\")\n if m['mbox'] == badguy_ds['mbox']:\n self.assertEquals(m['mbox'], badguy_ds['mbox'])\n elif m['mbox'] == badguy_m['mbox']:\n self.assertEquals(m['mbox'], badguy_m['mbox'])\n else:\n self.fail(\"got an unexpected mbox: \" % m['mbox'])", "metadata": "root.AgentManagerTests.test_agent_format", "header": "['class', 'AgentManagerTests', '(', 'TestCase', ')', ':', '___EOS___']", "index": 253 } ]	[ { "span": "self.assertTrue(bg.name in str(kwargs_bg['member']))", "start_line": 381, "start_column": 12, "end_line": 381, "end_column": 64 } ]	[]	1	true	[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Agent", "Manager", "Tests_", "(_", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "agent", "\\u", "format_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "ot", "\\u", "s_", "=_", "\"", "Agent", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "name", "\\u", "s_", "=_", "\"", "super", "man", "\"_", 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Except block handles 'BaseException'	cloudera/hue/apps/beeswax/src/beeswax/server/hive_server2_lib.py	[ { "content": " @property\n def partition_keys(self):\n try:\n return [PartitionKeyCompatible(row['col_name'], row['data_type'], row['comment']) for row in self._get_partition_column()]\n except:\n LOG.exception('failed to get partition keys')\n return []", "metadata": "root.HiveServerTable.partition_keys", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 83 }, { "content": " @property\n def path_location(self):\n try:\n rows = self.describe\n rows = [row for row in rows if row['col_name'].startswith('Location:')]\n if rows:\n return rows[0]['data_type']\n except:\n LOG.exception('failed to get path location')\n return None", "metadata": "root.HiveServerTable.path_location", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 91 }, { "content": " @property\n def cols(self):\n rows = self.describe\n col_row_index = 2\n try:\n end_cols_index = map(itemgetter('col_name'), rows[col_row_index:]).index('')\n return rows[col_row_index:][:end_cols_index] + self._get_partition_column()\n except ValueError: # DESCRIBE on columns and nested columns does not contain add'l rows beyond cols\n return rows[col_row_index:]\n except:\n # Impala does not have it\n return rows", "metadata": "root.HiveServerTable.cols", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 102 }, { "content": " def _get_partition_column(self):\n rows = self.describe\n try:\n col_row_index = map(itemgetter('col_name'), rows).index('# Partition Information') + 3\n end_cols_index = map(itemgetter('col_name'), rows[col_row_index:]).index('')\n return rows[col_row_index:][:end_cols_index]\n except:\n # Impala does not have it\n return []", "metadata": "root.HiveServerTable._get_partition_column", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 115 }, { "content": " def cols(self):\n try:\n return HiveServerTRowSet(self.columns, self.schema).cols(('col_name', 'data_type', 'comment'))\n except:\n # Impala API is different\n cols = HiveServerTRowSet(self.columns, self.schema).cols(('name', 'type', 'comment'))\n for col in cols:\n col['col_name'] = col.pop('name')\n col['data_type'] = col.pop('type')\n return cols", "metadata": "root.HiveServerTTableSchema.cols", "header": "['class', 'HiveServerTTableSchema', ':', '___EOS___']", "index": 326 }, { "content": " def get_log(self, operation_handle):\n try:\n req = TGetLogReq(operationHandle=operation_handle)\n res = self.call(self._client.GetLog, req)\n return res.log\n except:\n LOG.exception('server does not support GetLog')\n\n return 'Server does not support GetLog()'", "metadata": "root.HiveServerClient.get_log", "header": "['class', 'HiveServerClient', ':', '___EOS___']", "index": 850 } ]	[ { "span": "except:", "start_line": 87, "start_column": 4, "end_line": 87, "end_column": 11 }, { "span": "except:", "start_line": 98, "start_column": 4, "end_line": 98, "end_column": 11 }, { "span": "except:", "start_line": 111, "start_column": 4, "end_line": 111, "end_column": 11 }, { "span": "except:", "start_line": 121, "start_column": 4, "end_line": 121, "end_column": 11 }, { "span": "except:", "start_line": 329, "start_column": 4, "end_line": 329, "end_column": 11 }, { "span": "except:", "start_line": 855, "start_column": 4, "end_line": 855, "end_column": 11 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "class_", "Hi", "ve", "Server", "Table_", "(_", "Table_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "@_", "property_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "def_", "partit", "ion", "\\u", "keys_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", 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Unused local variable	spaceboats/busbus/tests/test_util_rate_limit_requests.py	[ { "content": "def test_get_interval(url_prefix):\n session = RateLimitRequests(interval=0.2)\n resp1 = session.get(url_prefix + '/get')\n t = datetime.now()\n resp2 = session.get(url_prefix + '/ip')\n assert datetime.now() - t > timedelta(seconds=0.1)", "metadata": "root.test_get_interval", "header": "['module', '___EOS___']", "index": 37 } ]	[ { "span": "resp1 ", "start_line": 39, "start_column": 4, "end_line": 39, "end_column": 9 }, { "span": "resp2 ", "start_line": 41, "start_column": 4, "end_line": 41, "end_column": 9 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "get", "\\u", "interval_", "(_", "url", "\\u", "prefix_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "session_", "=_", "Rat", "e", "Limit", "Requests_", "(_", "interval_", "=_", "0.2_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "resp", "1_", "=_", "session_", "._", "get_", "(_", "url", "\\u", "prefix_", "+_", "'/", "get", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "t_", "=_", "datetime_", "._", "now_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "resp", "2_", "=_", "session_", "._", "get_", "(_", "url", "\\u", "prefix_", "+_", "'/", "ip", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "assert_", "datetime_", "._", "now_", "(_", ")_", "-_", "t_", ">_", "timedelta_", "(_", "seconds_", "=_", "0.1_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused import	cloudera/hue/desktop/core/ext-py/openpyxl-2.3.0-b2/openpyxl/writer/styles.py	[ { "content": "from __future__ import absolute_import\n# Copyright (c) 2010-2015 openpyxl\n\n\"\"\"Write the shared style table.\"\"\"\n\n# package imports\n\nfrom openpyxl.compat import safe_string\nfrom openpyxl.utils.indexed_list import IndexedList\nfrom openpyxl.xml.functions import (\n Element,\n SubElement,\n ConditionalElement,\n tostring,\n )\nfrom openpyxl.xml.constants import SHEET_MAIN_NS\n\nfrom openpyxl.styles.colors import COLOR_INDEX\nfrom openpyxl.styles import DEFAULTS\nfrom openpyxl.styles.numbers import BUILTIN_FORMATS_REVERSE\nfrom openpyxl.styles.fills import GradientFill, PatternFill\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class StyleWriter(object):\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root.StyleWriter", "header": "['module', '___EOS___']", "index": 23 }, { "content": " def __init__(self, workbook):\n self.wb = workbook\n self._root = Element('styleSheet', {'xmlns': SHEET_MAIN_NS})", "metadata": "root.StyleWriter.__init__", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 25 }, { "content": " def write_table(self):\n self._write_number_formats()\n self._write_fonts()\n self._write_fills()\n self._write_borders()\n\n self._write_named_styles()\n self._write_cell_styles()\n self._write_style_names()\n self._write_differential_styles()\n self._write_table_styles()\n self._write_colors()\n\n return tostring(self._root)", "metadata": "root.StyleWriter.write_table", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 29 }, { "content": " def _write_number_formats(self):\n node = SubElement(self._root, 'numFmts', count= \"%d\" % len(self.wb._number_formats))\n for idx, nf in enumerate(self.wb._number_formats, 164):\n SubElement(node, 'numFmt', {'numFmtId':'%d' % idx,\n 'formatCode':'%s' % nf}\n )", "metadata": "root.StyleWriter._write_number_formats", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 45 }, { "content": " def _write_fonts(self):\n fonts_node = SubElement(self._root, 'fonts', count=\"%d\" % len(self.wb._fonts))\n for font in self.wb._fonts:\n fonts_node.append(font.to_tree())", "metadata": "root.StyleWriter._write_fonts", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 52 }, { "content": " def _write_fills(self):\n fills_node = SubElement(self._root, 'fills', count=\"%d\" % len(self.wb._fills))\n for fill in self.wb._fills:\n fills_node.append(fill.to_tree())", "metadata": "root.StyleWriter._write_fills", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 58 }, { "content": " def _write_borders(self):\n \"\"\"Write the child elements for an individual border section\"\"\"\n borders_node = SubElement(self._root, 'borders', count=\"%d\" % len(self.wb._borders))\n for border in self.wb._borders:\n borders_node.append(border.to_tree())", "metadata": "root.StyleWriter._write_borders", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 63 }, { "content": " def _write_named_styles(self):\n styles = self.wb._named_styles\n cell_style_xfs = SubElement(self._root, 'cellStyleXfs', count=\"%d\" % len(styles))\n\n for style in self.wb._named_styles.values():\n attrs = {}\n\n attrs['fontId'] = str(self.wb._fonts.add(style.font))\n attrs['borderId'] = str(self.wb._borders.add(style.border))\n attrs['fillId'] = str(self.wb._fills.add(style.fill))\n fmt = style.number_format\n if fmt in BUILTIN_FORMATS_REVERSE:\n fmt = BUILTIN_FORMATS_REVERSE[fmt]\n else:\n fmt = self.wb._number_formats.add(style.number_format) + 164\n attrs['numFmtId'] = str(fmt)\n\n SubElement(cell_style_xfs, 'xf', attrs)", "metadata": "root.StyleWriter._write_named_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 69 }, { "content": " def _write_cell_styles(self):\n \"\"\" write styles combinations based on ids found in tables \"\"\"\n # writing the cellXfs\n cell_xfs = SubElement(self._root, 'cellXfs',\n count='%d' % len(self.wb._cell_styles))\n\n for style in self.wb._cell_styles:\n\n node = style.to_tree()\n cell_xfs.append(node)\n\n if style.applyAlignment:\n al = self.wb._alignments[style.alignmentId]\n el = al.to_tree()\n node.append(el)\n\n if style.applyProtection:\n prot = self.wb._protections[style.protectionId]\n el = prot.to_tree()\n node.append(el)", "metadata": "root.StyleWriter._write_cell_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 88 }, { "content": " def _write_style_names(self):\n styles = self.wb._named_styles\n\n cell_styles = SubElement(self._root, 'cellStyles', count=str(len(styles)))\n\n for idx, style in enumerate(styles.values()):\n attrs = dict(style)\n attrs['xfId'] = str(idx)\n SubElement(cell_styles, 'cellStyle', attrs)", "metadata": "root.StyleWriter._write_style_names", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 110 }, { "content": " def _write_differential_styles(self):\n dxfs = SubElement(self._root, \"dxfs\", count=str(len(self.wb._differential_styles)))\n for fmt in self.wb._differential_styles:\n dxfs.append(fmt.to_tree())\n return dxfs", "metadata": "root.StyleWriter._write_differential_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 121 }, { "content": " def _write_table_styles(self):\n\n SubElement(self._root, 'tableStyles',\n {'count':'0', 'defaultTableStyle':'TableStyleMedium9',\n 'defaultPivotStyle':'PivotStyleLight16'})", "metadata": "root.StyleWriter._write_table_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 128 }, { "content": " def _write_colors(self):\n \"\"\"\n Workbook contains a different colour index.\n \"\"\"\n\n if self.wb._colors == COLOR_INDEX:\n return\n\n cols = SubElement(self._root, \"colors\")\n rgb = SubElement(cols, \"indexedColors\")\n for color in self.wb._colors:\n SubElement(rgb, \"rgbColor\", rgb=color)", "metadata": "root.StyleWriter._write_colors", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 134 } ]	[ { "span": "from openpyxl.compat import safe_string", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 39 }, { "span": "from openpyxl.utils.indexed_list import IndexedList", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 51 }, { "span": "from openpyxl.xml.functions import (\n Element,\n SubElement,\n ConditionalElement,\n tostring,\n )", "start_line": 9, "start_column": 0, "end_line": 14, "end_column": 5 }, { "span": "from openpyxl.styles import DEFAULTS", "start_line": 18, "start_column": 0, "end_line": 18, "end_column": 36 }, { "span": "from openpyxl.styles.fills import GradientFill, PatternFill", "start_line": 20, "start_column": 0, "end_line": 20, "end_column": 59 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "\\u\\u", "future\\u\\u_", "import_", "abs", "olute", "\\u", "import_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "Copy", "right", " ", "(", "c", ")", " ", "2010", "-", "201", "5", " ", "openp", "yx", "l_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\"\"\"", "Write", " ", "the", " ", "shared", " ", "style", " ", "table", ".\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "package", " ", "imports_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "compat_", "import_", "safe", "\\u", "string_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "utils_", "._", "indexe", "d\\u", "list_", "import_", "Indexe", "d", "List_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "xml_", "._", "functions_", "import_", "(_", "\\u\\u\\uNL\\u\\u\\u_", "Element_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "Sub", "Element_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "Cond", "itional", "Element_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "tostring_", ",_", "\\u\\u\\uNL\\u\\u\\u_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "xml_", "._", "constants_", "import_", "SHE", "ET", "\\u", "MAIN", "\\u", "NS_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "styles_", "._", "colors_", "import_", "COLOR", "\\u", "INDEX_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "styles_", "import_", "DEFAULTS_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "styles_", "._", "numbers_", "import_", "BUILT", "IN", "\\u", "FORMAT", "S", "\\u", "REVERSE", "_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "openp", "yx", "l_", "._", "styles_", "._", "fills", "_", "import_", "Grad", "ient", "Fill_", ",_", "Pat", "tern", "Fill_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "class_", "Style", "Writer_", "(_", "object_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", 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Unreachable code	testing-cabal/mock/mock/mock.py	[ { "content": "# mock.py\n# Test tools for mocking and patching.\n# E-mail: fuzzyman AT voidspace DOT org DOT uk\n#\n# mock 1.0.1\n# http://www.voidspace.org.uk/python/mock/\n#\n# Copyright (c) 2007-2013, Michael Foord & the mock team\n# All rights reserved.\n#\n# Redistribution and use in source and binary forms, with or without\n# modification, are permitted provided that the following conditions are\n# met:\n#\n# * Redistributions of source code must retain the above copyright\n# notice, this list of conditions and the following disclaimer.\n#\n# * Redistributions in binary form must reproduce the above\n# copyright notice, this list of conditions and the following\n# disclaimer in the documentation and/or other materials provided\n# with the distribution.\n#\n# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS\n# \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT\n# LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR\n# A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT\n# OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,\n# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT\n# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,\n# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY\n# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT\n# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE\n# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.\n\nfrom __future__ import absolute_import\n\n__all__ = (\n '__version__',\n 'version_info',\n 'Mock',\n 'MagicMock',\n 'patch',\n 'sentinel',\n 'DEFAULT',\n 'ANY',\n 'call',\n 'create_autospec',\n 'FILTER_DIR',\n 'CallableMixin',\n 'NonCallableMock',\n 'NonCallableMagicMock',\n 'mock_open',\n 'PropertyMock',\n)\n\n\nfrom functools import partial\nimport inspect\nimport pprint\nimport sys\ntry:\n import builtins\nexcept ImportError:\n import __builtin__ as builtins\nfrom types import ModuleType\n\nimport six\nfrom six import wraps\nfrom pbr.version import VersionInfo\n\n_v = VersionInfo('mock').semantic_version()\n__version__ = _v.release_string()\nversion_info = _v.version_tuple()\n\nimport mock\n\ntry:\n inspectsignature = inspect.signature\nexcept AttributeError:\n import funcsigs\n inspectsignature = funcsigs.signature\n\n\n# TODO: use six.\ntry:\n unicode\nexcept NameError:\n # Python 3\n basestring = unicode = str\n\ntry:\n long\nexcept NameError:\n # Python 3\n long = int\n\ntry:\n BaseException\nexcept NameError:\n # Python 2.4 compatibility\n BaseException = Exception\n\nif six.PY2:\n # Python 2's next() can't handle a non-iterator with a __next__ method.\n _next = next\n\n del _next\n\n\n_builtins = set(name for name in dir(builtins) if not name.startswith('_'))\n\nBaseExceptions = (BaseException,)\nif 'java' in sys.platform:\n # jython\n import java\n BaseExceptions = (BaseException, java.lang.Throwable)\n\ntry:\n _isidentifier = str.isidentifier\nexcept AttributeError:\n # Python 2.X\n import keyword\n import re\n regex = re.compile(r'^[a-z_][a-z0-9_]*$', re.I)\n\nself = 'im_self'\nbuiltin = '__builtin__'\nif six.PY3:\n self = '__self__'\n builtin = 'builtins'\n\n# NOTE: This FILTER_DIR is not used. The binding in mock.FILTER_DIR is.\nFILTER_DIR = True\n\n# Workaround for Python issue #12370\n# Without this, the __class__ properties wouldn't be set correctly\n_safe_super = super\n\n\n\n\n\n\n\nDescriptorTypes = (\n type(_slotted.a),\n property,\n)\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nsentinel = _Sentinel()\n\nDEFAULT = sentinel.DEFAULT\n_missing = sentinel.MISSING\n_deleted = sentinel.DELETED\n\n\nClassType = type(OldStyleClass)\n\n\n\n\nClassTypes = (type,)\nif six.PY2:\n ClassTypes = (type, ClassType)\n\n_allowed_names = set((\n 'return_value', '_mock_return_value', 'side_effect',\n '_mock_side_effect', '_mock_parent', '_mock_new_parent',\n '_mock_name', '_mock_new_name'\n))\n\n\n\n\n\n\n\n\n# Internal class to identify if we wrapped an iterator object or not.\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\npatch.object = _patch_object\npatch.dict = _patch_dict\npatch.multiple = _patch_multiple\npatch.stopall = _patch_stopall\npatch.TEST_PREFIX = 'test'\n\nmagic_methods = (\n \"lt le gt ge eq ne \"\n \"getitem setitem delitem \"\n \"len contains iter \"\n \"hash str sizeof \"\n \"enter exit \"\n # we added divmod and rdivmod here instead of numerics\n # because there is no idivmod\n \"divmod rdivmod neg pos abs invert \"\n \"complex int float index \"\n \"trunc floor ceil \"\n)\n\nnumerics = (\n \"add sub mul matmul div floordiv mod lshift rshift and xor or pow\"\n)\nif six.PY3:\n numerics += ' truediv'\ninplace = ' '.join('i%s' % n for n in numerics.split())\nright = ' '.join('r%s' % n for n in numerics.split())\nextra = ''\nif six.PY3:\n extra = 'bool next '\nelse:\n extra = 'unicode long nonzero oct hex truediv rtruediv '\n\n# not including __prepare__, __instancecheck__, __subclasscheck__\n# (as they are metaclass methods)\n# __del__ is not supported at all as it causes problems if it exists\n\n_non_defaults = set((\n '__cmp__', '__getslice__', '__setslice__', '__coerce__', # <3.x\n '__get__', '__set__', '__delete__', '__reversed__', '__missing__',\n '__reduce__', '__reduce_ex__', '__getinitargs__', '__getnewargs__',\n '__getstate__', '__setstate__', '__getformat__', '__setformat__',\n '__repr__', '__dir__', '__subclasses__', '__format__',\n))\n\n\n\n\n_magics = set(\n '__%s__' % method for method in\n ' '.join([magic_methods, numerics, inplace, right, extra]).split()\n)\n\n_all_magics = _magics \| _non_defaults\n\n_unsupported_magics = set((\n '__getattr__', '__setattr__',\n '__init__', '__new__', '__prepare__'\n '__instancecheck__', '__subclasscheck__',\n '__del__'\n))\n\n_calculate_return_value = {\n '__hash__': lambda self: object.__hash__(self),\n '__str__': lambda self: object.__str__(self),\n '__sizeof__': lambda self: object.__sizeof__(self),\n '__unicode__': lambda self: unicode(object.__str__(self)),\n}\n\n_return_values = {\n '__lt__': NotImplemented,\n '__gt__': NotImplemented,\n '__le__': NotImplemented,\n '__ge__': NotImplemented,\n '__int__': 1,\n '__contains__': False,\n '__len__': 0,\n '__exit__': False,\n '__complex__': 1j,\n '__float__': 1.0,\n '__bool__': True,\n '__nonzero__': True,\n '__oct__': '1',\n '__hex__': '0x1',\n '__long__': long(1),\n '__index__': 1,\n}\n\n\n\n\n\n_side_effect_methods = {\n '__eq__': _get_eq,\n '__ne__': _get_ne,\n '__iter__': _get_iter,\n}\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nANY = _ANY()\n\n\n\n\n\n\n\n\ncall = _Call(from_kall=False)\n\n\n\n\n\n\n\n\n\n\n\nFunctionTypes = (\n # python function\n type(create_autospec),\n # instance method\n type(ANY.__eq__),\n)\n\nMethodWrapperTypes = (\n type(ANY.__eq__.__get__),\n)\n\n\nfile_spec = None\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "except NameError:", "start_line": 98, "start_column": 0, "end_line": 98, "end_column": 17 } ]	[]	1	true	[ "[CLS]_", "Unrea", "chab", "le_", "code_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "mock", ".", "py_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", 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Unused import	ZoomerAnalytics/xlwings/xlwings/__init__.py	[ { "content": "from __future__ import absolute_import\nimport sys\n\n__version__ = '0.7.1'\n\n# Python 2 vs 3\nPY3 = sys.version_info[0] == 3\n\nif PY3:\n string_types = str\n xrange = range\n from builtins import map\n import builtins\nelse:\n string_types = basestring\n xrange = xrange\n from future_builtins import map\n builtins = __builtins__\n\n# Platform specifics\nif sys.platform.startswith('win'):\n from . import _xlwindows as xlplatform\nelse:\n from . import _xlmac as xlplatform\n\ntime_types = xlplatform.time_types\n\n# Errors\n\n# API\nfrom .main import Application, Workbook, Range, Chart, Sheet, Picture, Shape, Plot, view\nfrom .constants import \n\n# UDFs\nif sys.platform.startswith('win'):\n from .udfs import xlfunc as func, xlsub as sub, xlret as ret, xlarg as arg, get_udf_module, import_udfs\n\n\n\n\n\n\n\n\n\n\n# Server\nif sys.platform.startswith('win'):\n from .server import serve", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class ShapeAlreadyExists(Exception):\n pass", "metadata": "root.ShapeAlreadyExists", "header": "['module', '___EOS___']", "index": 28 }, { "content": "def xlfunc(args, *kwargs):\n raise Exception(\"Deprecation: 'xlfunc' has been renamed to 'func' - use 'import xlwings as xw' and decorate your function with '@xw.func'.\")", "metadata": "root.xlfunc", "header": "['module', '___EOS___']", "index": 40 }, { "content": "def xlsub(args, *kwargs):\n raise Exception(\"Deprecation: 'xlsub' has been renamed to 'sub' - use 'import xlwings as xw' and decorate your function with '@xw.sub'.\")", "metadata": "root.xlsub", "header": "['module', '___EOS___']", "index": 44 }, { "content": "def xlret(args, *kwargs):\n raise Exception(\"Deprecation: 'xlret' has been renamed to 'ret' - use 'import xlwings as xw' and decorate your function with '@xw.ret'.\")", "metadata": "root.xlret", "header": "['module', '___EOS___']", "index": 48 }, { "content": "def xlarg(args, **kwargs):\n raise Exception(\"Deprecation: 'xlarg' has been renamed to 'arg' - use 'import xlwings as xw' and decorate your function with '@xw.arg'.\")", "metadata": "root.xlarg", "header": "['module', '___EOS___']", "index": 52 } ]	[ { "span": "from builtins import map", "start_line": 11, "start_column": 4, "end_line": 11, "end_column": 28 }, { "span": "import builtins", "start_line": 12, "start_column": 4, "end_line": 12, "end_column": 19 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "\\u\\u", "future\\u\\u_", "import_", "abs", "olute", "\\u", "import_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "sys_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u", "version\\u\\u_", "=_", "'", "0.", "7.1", "'_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "Pyth", "on", " ", "2", " ", "vs", " ", "3_", "\\u\\u\\uNL\\u\\u\\u_", "PY", "3_", "=_", "sys_", "._", "version", 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Modification of parameter with default	openelections/openelections-core/openelex/lib/__init__.py	[ { "content": "def standardized_filename(state, start_date, extension,\n party=None, special=False, race_type=None, reporting_level=None,\n jurisdiction=None, office=None, office_district=None,\n prefix_bits=[], suffix_bits=[], sep=\"__\"):\n \"\"\"\n Standardize an election-related filename.\n\n For more on filename standardization conventions, see\n http://docs.openelections.net/archive-standardization/.\n\n Args:\n state (string): State abbreviation, for example \"md\".\n start_date (string): String representing the election's start date\n in YYYY-MM-DD format.\n extension (string): Filename extension, including the leading '.'. For\n example, \".csv\".\n party (string, optional): Slug representing the political party of\n information in the file.\n special (boolean, optional): Whether the file contains data related to a\n special election. Default is False.\n race_type (string, optional): Slug representing the type of election\n contest. For example, \"general\", \"primary\", etc.\n reporting_level (string, optional): Slug representing the reporting level of\n the data file. This could be something like 'county' or\n 'precinct'.\n jurisdiction (string, optional): The jurisdiction of the data\n covered in the file.\n office (string, optional): Office if results are for a single office.\n office_district (string, optional): Office district number if\n the data in the file are for a single office.\n prefix_bits (list, optional): List of strings that will be prepended to\n the generated filename and separated by the value of ``sep``.\n suffix_bits (list, optional): List of strings that will be appended\n to the generated filename and separated by the value of ``sep``.\n sep (string, optional): Separator between filename elements. Default\n is \"__\".\n\n Returns:\n A string representing the standardized filename for\n election-related data.\n\n \"\"\"\n # Store filename components in a list that we'll eventually join together\n bits = []\n\n # Filename starts with the prefix bits, if any\n bits.extend(prefix_bits)\n\n # All filenames need a date and a state\n bits.extend([\n start_date.replace('-', ''),\n state.lower(),\n ])\n\n if special:\n bits.append('special')\n\n if party:\n bits.append(slugify(party))\n\n if race_type:\n bits.append(race_type.replace('-', '_'))\n\n if jurisdiction:\n bits.append(slugify(jurisdiction))\n\n if office:\n bits.append(slugify(office))\n\n if office_district:\n bits.append(slugify(office_district))\n\n if reporting_level:\n bits.append(reporting_level)\n\n bits.extend(suffix_bits)\n\n return sep.join(bits) + extension", "metadata": "root.standardized_filename", "header": "['module', '___EOS___']", "index": 33 } ]	[ { "span": "bits.", "start_line": 82, "start_column": 4, 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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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Unused import	neurodata/ndstore/test/test_ramon.py	[ { "content": "# Copyright 2014 Open Connectome Project (http://openconnecto.me)\n# \n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n# \n# http://www.apache.org/licenses/LICENSE-2.0\n# \n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\nimport urllib2\nimport re\nimport tempfile\nimport h5py\nimport random \nimport csv\nimport numpy as np\nimport pytest\nimport httplib\nfrom contextlib import closing\n\nfrom params import Params\nfrom postmethods import putAnnotation, getAnnotation\nfrom ramon import H5AnnotationFile, getH5id, makeAnno, getId, getField, setField\nimport kvengine_to_test\nimport site_to_test\nimport makeunitdb\nSITE_HOST = site_to_test.site\n\n\np = Params()\np.token = 'unittest'\np.resolution = 0\np.channels = ['unit_anno']\n\n\n# RBTODO add tests key/value and compound fields.\n # assign a field for a wrong annotation type\n# url = \"http://%s/ca/%s/%s/setField/segmentclass/2/\" % ( SITE_HOST, 'unittest',str(annid))\n# with pytest.raises(urllib2.HTTPError): \n# req = urllib2.Request ( url )\n# f = urllib2.urlopen ( url )\n\n# def test_kvpairs(self):\n#\n# \"\"\"Test 1: Create a minimal HDF5 file\"\"\"\n# # Create an in-memory HDF5 file\n# tmpfile = tempfile.NamedTemporaryFile()\n# h5fh = h5py.File ( tmpfile.name )\n#\n# # Create the top level annotation id namespace\n# idgrp = h5fh.create_group ( str(0) )\n#\n# # Create a metadata group\n# mdgrp = idgrp.create_group ( \"METADATA\" )\n#\n# kvpairs={}\n#\n# # Turn our dictionary into a csv file\n# fstring = cStringIO.StringIO()\n# csvw = csv.writer(fstring, delimiter=',')\n# csvw.writerows([r for r in kvpairs.iteritems()])\n#\n# # User-defined metadata\n# mdgrp.create_dataset ( \"KVPAIRS\", (1,), dtype=h5py.special_dtype(vlen=str), data=fstring.getvalue())\n#\n# # Now put an empty file\n# # Build the put URL\n# url = \"http://%s/ca/%s/\" % ( SITE_HOST, 'unittest')\n#\n# # write an object (server creates identifier)\n# req = urllib2.Request ( url, tmpfile.read())\n# response = urllib2.urlopen(req)\n# putid = int(response.read())\n#\n# # now read and verify\n# # retrieve the annotation\n# url = \"http://%s/ca/%s/%s/\" % ( SITE_HOST, 'unittest', str(putid))\n# f = urllib2.urlopen ( url )\n# retfile = tempfile.NamedTemporaryFile ( )\n# retfile.write ( f.read() )\n# retfile.seek(0)\n# h5ret = h5py.File ( tmpfile.name, driver='core', backing_store=False )\n#\n# mdgrpret = idgrpret['METADATA']\n# idgrpret = h5ret.get(str(putid1))\n#\n# assert ( mdgrpret['KVPAIRS'][:] == '' )\n#\n# for i in range(10):\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Test_Ramon:\n\n\n\n\n\n\n\n\n\n\n\n\n\n \n\n\n\n\n\n\n\n\n\n", "metadata": "root.Test_Ramon", "header": "['module', '___EOS___']", "index": 39 }, { "content": " def setup_class(self):\n \"\"\"Create the unittest database\"\"\"\n makeunitdb.createTestDB(p.token, readonly=0)", "metadata": "root.Test_Ramon.setup_class", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 42 }, { "content": " def teardown_class (self):\n \"\"\"Destroy the unittest database\"\"\"\n makeunitdb.deleteTestDB(p.token)", "metadata": "root.Test_Ramon.teardown_class", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 46 }, { "content": " def test_anno_minmal(self):\n \"\"\"Upload a minimal and maximal annotation. Verify fields.\"\"\"\n \n # Create an in-memory HDF5 file\n tmpfile = tempfile.NamedTemporaryFile()\n h5fh = h5py.File ( tmpfile.name )\n # Create the top level annotation id namespace\n idgrp = h5fh.create_group ( str(0) )\n h5fh.flush()\n tmpfile.seek(0)\n \n p.annoid = putAnnotation(p, tmpfile)\n h5ret = getAnnotation(p)\n\n idgrpret = h5ret.get(str(p.annoid))\n assert idgrpret\n assert ( idgrpret['ANNOTATION_TYPE'][0] == 1 )\n assert not idgrpret.get('RESOLUTION')\n assert not idgrpret.get('XYZOFFSET')\n assert not idgrpret.get('VOXELS')\n assert not idgrpret.get('CUTOUT')\n mdgrpret = idgrpret['METADATA']\n assert mdgrpret\n assert ( mdgrpret['CONFIDENCE'][0] == 0.0 )\n assert ( mdgrpret['STATUS'][0] == 0 )\n assert ( mdgrpret['KVPAIRS'][:] == '' )\n assert ( mdgrpret['AUTHOR'][:] == 'unknown' )", "metadata": "root.Test_Ramon.test_anno_minmal", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 51 }, { "content": " def test_anno_full (self):\n \"\"\"Upload a fully populated HDF5 file\"\"\"\n \n # Create an in-memory HDF5 file\n tmpfile = tempfile.NamedTemporaryFile()\n h5fh = h5py.File ( tmpfile.name )\n # Create the top level annotation id namespace\n idgrp = h5fh.create_group ( str(0) )\n \n # Create a metadata group\n mdgrp = idgrp.create_group ( \"METADATA\" )\n\n # now lets add a bunch of random values for the specific annotation type\n ann_status = random.randint(0,4)\n ann_confidence = random.random()\n ann_author = 'unittest_author'\n\n # Annotation type\n idgrp.create_dataset ( \"ANNOTATION_TYPE\", (1,), np.uint32, data=1 )\n\n # Set Annotation specific metadata\n mdgrp.create_dataset ( \"STATUS\", (1,), np.uint32, data=ann_status )\n mdgrp.create_dataset ( \"CONFIDENCE\", (1,), np.float, data=ann_confidence )\n mdgrp.create_dataset ( \"AUTHOR\", (1,), dtype=h5py.special_dtype(vlen=str), data=ann_author )\n\n h5fh.flush()\n tmpfile.seek(0)\n\n p.annoid = putAnnotation(p, tmpfile)\n h5ret = getAnnotation(p)\n\n idgrpret = h5ret.get(str(p.annoid))\n assert idgrpret\n assert ( idgrpret['ANNOTATION_TYPE'][0] == 1 )\n assert not idgrpret.get('RESOLUTION')\n assert not idgrpret.get('XYZOFFSET')\n assert not idgrpret.get('VOXELS')\n assert not idgrpret.get('CUTOUT')\n mdgrpret = idgrpret['METADATA']\n assert mdgrpret\n assert ( abs(mdgrpret['CONFIDENCE'][0] - ann_confidence) < 0.0001 )\n assert ( mdgrpret['STATUS'][0] == ann_status )\n assert ( mdgrpret['AUTHOR'][:] == ann_author )\n\n tmpfile.close()", "metadata": "root.Test_Ramon.test_anno_full", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 80 }, { "content": " def test_anno_update (self):\n \"\"\"Upload a Updated file with new data\"\"\"\n\n tmpfile = tempfile.NamedTemporaryFile()\n h5fh = h5py.File ( tmpfile.name )\n\n # Create the top level annotation id namespace\n idgrp = h5fh.create_group ( str(p.annoid) )\n\n # Create a metadata group\n mdgrp = idgrp.create_group ( \"METADATA\" )\n\n # now lets add a bunch of random values for the specific annotation type\n ann_status = random.randint(0,4)\n ann_confidence = random.random()\n ann_author = 'unittest_author2'\n\n # Annotation type\n idgrp.create_dataset ( \"ANNOTATION_TYPE\", (1,), np.uint32, data=1 )\n\n # Set Annotation specific metadata\n mdgrp.create_dataset ( \"STATUS\", (1,), np.uint32, data=ann_status )\n mdgrp.create_dataset ( \"CONFIDENCE\", (1,), np.float, data=ann_confidence )\n mdgrp.create_dataset ( \"AUTHOR\", (1,), dtype=h5py.special_dtype(vlen=str), data=ann_author )\n\n h5fh.flush()\n tmpfile.seek(0)\n\n p.field = 'update'\n p.annoid = putAnnotation(p, tmpfile)\n p.field = None\n h5ret = getAnnotation(p)\n\n idgrpret = h5ret.get(str(p.annoid))\n assert idgrpret\n assert ( idgrpret['ANNOTATION_TYPE'][0] == 1 )\n assert not idgrpret.get('RESOLUTION')\n assert not idgrpret.get('XYZOFFSET')\n assert not idgrpret.get('VOXELS')\n assert not idgrpret.get('CUTOUT')\n mdgrpret = idgrpret['METADATA']\n assert mdgrpret\n assert ( abs(mdgrpret['CONFIDENCE'][0] - ann_confidence) < 0.0001 )\n #assert ( mdgrpret['CONFIDENCE'][0] == ann_confidence )\n assert ( mdgrpret['STATUS'][0] == ann_status )\n assert ( mdgrpret['AUTHOR'][:] == ann_author )", "metadata": "root.Test_Ramon.test_anno_update", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 127 }, { "content": " def test_anno_delete (self):\n \"\"\"Delete the object\"\"\"\n \n # Build the delete URL\n try:\n (base,suffix) = SITE_HOST.split(\"/\",1)\n except:\n base = SITE_HOST\n suffix = None\n\n conn = httplib.HTTPConnection ( base )\n\n if suffix:\n conn.request ('DELETE', '/{}/ca/{}/{}/{}/'.format(suffix, 'unittest', 'unit_anno', p.annoid)) \n else:\n conn.request ('DELETE', '/ca/{}/{}/{}/'.format('unittest', 'unit_anno', p.annoid))\n\n resp = conn.getresponse()\n content=resp.read()\n\n assert content == 'Success'\n\n # retrieve the annotation\n # verify that it's not there.\n url = \"http://{}/ca/{}/{}/{}/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n urllib2.urlopen ( url )", "metadata": "root.Test_Ramon.test_anno_delete", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 175 }, { "content": " def test_anno_upload( self ):\n \"\"\"Upload all different kinds of annotations and retrieve\"\"\"\n\n for anntype in [ 1, 2, 3, 4, 5, 6]:\n \n annoid = 0\n f = H5AnnotationFile ( anntype, annoid )\n\n putid1 = putAnnotation(p, f)\n\n # this assumes that +1 is available (which it is)\n newid = putid1 + 1\n f = H5AnnotationFile ( anntype, newid )\n\n putid2 = putAnnotation(p, f)\n\n # retrieve both annotations\n p.annoid = putid1\n assert ( putid1 == getId(p) )\n p.annoid = putid2\n assert ( putid2 == getId(p) )", "metadata": "root.Test_Ramon.test_anno_upload", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 204 }, { "content": " def test_annotation_field (self):\n \"\"\"Upload an annotation and test it's fields\"\"\"\n\n # Make an annotation \n makeAnno (p, 1)\n \n # Test Status\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test confidence\n confidence = random.random ()\n f = setField(p, 'confidence', confidence)\n f = getField(p, 'confidence')\n assert confidence - float(f.read()) < 0.001\n \n # Test author\n #f = self.getField(p, 'author')\n #assert 'Unit Test' == f.read()", "metadata": "root.Test_Ramon.test_annotation_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 227 }, { "content": " def test_synapse_field (self):\n \"\"\"Upload a synapse and test it's fields\"\"\"\n\n # Make a synapse\n makeAnno (p, 2)\n\n # Test synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test the inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_synapse_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 250 }, { "content": " def test_seed_field (self):\n \"\"\"Upload a seed and test it's fields\"\"\"\n\n # Make a seed\n makeAnno (p, 3)\n\n # Test the parent\n parent = random.randint (0,100)\n f = setField(p, 'parent', parent)\n f = getField(p, 'parent')\n assert parent == int(f.read()) \n\n # Test the source\n source = random.randint (0,100)\n f = setField(p, 'source', source)\n f = getField(p, 'source')\n assert source == int(f.read()) \n\n # Test the cubelocation\n cubelocation = random.randint (0,100)\n f = setField(p, 'cubelocation', cubelocation)\n f = getField(p, 'cubelocation')\n assert cubelocation == int(f.read()) \n \n # Test the position\n position = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'position', ','.join([str(i) for i in position]))\n f = getField(p, 'position')\n assert ','.join([str(i) for i in position]) == f.read()", "metadata": "root.Test_Ramon.test_seed_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 280 }, { "content": " def test_segment_field (self):\n \"\"\"Upload a segment and test it's fields\"\"\"\n\n # Make a segment\n makeAnno (p, 4)\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the segmentclass\n segmentclass = random.randint (0,100)\n f = setField(p, 'segmentclass', segmentclass)\n f = getField(p, 'segmentclass')\n assert segmentclass == int(f.read()) \n\n # Test the neuron\n neuron = random.randint (0,100)\n f = setField(p, 'neuron', neuron)\n f = getField(p, 'neuron')\n assert neuron == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n \n # Test the synapses\n synapses = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'synapses', ','.join([str(i) for i in synapses]))\n f = getField(p, 'synapses')\n assert ','.join([str(i) for i in synapses]) == f.read()", "metadata": "root.Test_Ramon.test_segment_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 311 }, { "content": " def test_neuron_field (self):\n \"\"\"Upload a neuron and test it's fields\"\"\"\n\n # Make a neuron\n makeAnno (p, 5)\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test segments\n status = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'segments', \",\".join([str(i) for i in status]))\n f = getField(p, 'segments')\n assert \",\".join([str(i) for i in status]) == f.read()", "metadata": "root.Test_Ramon.test_neuron_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 348 }, { "content": " def test_organelle_field (self):\n \"\"\"Upload an organelle and test it's fields\"\"\"\n\n # Make an organelle \n makeAnno ( p, 6 )\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the organelleclass\n organelleclass = random.randint (0,100)\n f = setField(p, 'organelleclass', organelleclass)\n f = getField(p, 'organelleclass')\n assert organelleclass == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_organelle_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 366 }, { "content": " def test_wrong_field ( self ):\n \n # Make an annotation \n makeAnno (p, 2)\n\n # Test the synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read())\n \n # bad format to a number\n url = \"http://{}/ca/{}/{}/{}/setField/status/aa/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )\n \n # request a missing field\n url = \"http://{}/ca/{}/{}/{}/getField/othernonesuch/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )", "metadata": "root.Test_Ramon.test_wrong_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 396 } ]	[ { "span": "import re", "start_line": 15, "start_column": 0, "end_line": 15, "end_column": 9 }, { "span": "import csv", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 10 }, { "span": "from contextlib import closing", "start_line": 23, "start_column": 0, "end_line": 23, "end_column": 30 }, { "span": "from ramon import H5AnnotationFile, getH5id, makeAnno, getId, getField, setField", "start_line": 27, "start_column": 0, "end_line": 27, "end_column": 80 }, { "span": "import kvengine_to_test", "start_line": 28, "start_column": 0, "end_line": 28, "end_column": 23 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "Copy", "right", " ", "2014", " ", "Open", " ", "Connect", "ome", " ", "Project", " ", "(", "http", "://", "openco", "nnect", "o", ".", "me", ")_", "\\u\\u\\uNL\\u\\u\\u_", "#", " _", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "License", "d", " ", "under", " ", "the", " ", "Ap", "ache", " ", "License", ",", " ", "Version", " ", "2.0", " ", "(", "the", " ", "\"", "License", "\");", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "you", " ", "may", " ", "not", " ", "use", " ", "this", " ", "file", " ", "except", " ", "in", " ", "compli", "anc", "e", " ", "with", " ", "the", " ", 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Unused import	pandemicsyn/stalker/stalkerweb/stalkerweb/views.py	[ { "content": "import json\nimport eventlet\neventlet.monkey_patch()\nfrom eventlet.green import urllib2\nfrom flask import request, abort, render_template, session, redirect\nfrom bson import ObjectId\nfrom time import time\nfrom random import randint\nfrom stalkerweb.auth import is_valid_login, login_required, remove_user\nfrom stalkerweb.stutils import jsonify, genPrimaryKey64\nfrom stalkerweb import app, rc, rdb\nfrom flask.ext.wtf import Form\nfrom wtforms import TextField, PasswordField, BooleanField\nfrom wtforms.validators import Required\nfrom werkzeug.contrib.cache import RedisCache\nimport rethinkdb as r\nfrom rethinkdb.errors import RqlDriverError, RqlRuntimeError\nimport logging\n\nVALID_STATES = ['alerting', 'pending', 'in_maintenance', 'suspended']\n\ncache = RedisCache(host=app.config['REDIS_HOST'], port=app.config['REDIS_PORT'], default_timeout=app.config['CACHE_TTL'])\n\nlogger = logging.getLogger(app.config['LOG_NAME'])\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n \n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nif __name__ == '__main__':\n debug = True\n app.run(host='0.0.0.0', debug=debug)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class SignInForm(Form):\n username = TextField(validators=[Required()])\n password = PasswordField(validators=[Required()])\n remember_me = BooleanField()", "metadata": "root.SignInForm", "header": "['module', '___EOS___']", "index": 26 }, { "content": "def _get_local_metrics():\n metrics = {}\n mkeys = ['checks', 'failing', 'flapping', 'pending', 'qsize',\n 'suspended']\n try:\n values = rc.mget(mkeys)\n for k in mkeys:\n metrics[k] = int(values[mkeys.index(k)])\n return metrics\n except Exception as err:\n logger.exception('Error gathering metrics')\n return None", "metadata": "root._get_local_metrics", "header": "['module', '___EOS___']", "index": 32 }, { "content": "def _get_remote_checks(clusterid, state):\n endpoints = {'alerting': '/checks/state/alerting',\n 'pending': '/checks/state/pending',\n 'suspended': '/checks/state/suspended',\n 'in_maintenance': '/checks/state/in_maintenance'}\n target = app.config['GLOBAL_CLUSTERS'][clusterid]['host'] + \\\n endpoints[state]\n headers = {'X-API-KEY': app.config['GLOBAL_CLUSTERS'][clusterid]['key']}\n try:\n req = urllib2.Request(target, headers=headers)\n res = urllib2.urlopen(req, timeout=app.config['REMOTE_TIMEOUT'])\n return json.loads(res.read())\n except Exception as err:\n logger.exception(\"Error grabbing checks for %s: %s\" % (clusterid, err))\n return None", "metadata": "root._get_remote_checks", "header": "['module', '___EOS___']", "index": 46 }, { "content": "def _get_remote_stats(clusterid):\n target = app.config['GLOBAL_CLUSTERS'][clusterid]['host'] + '/stats'\n headers = {'X-API-KEY': app.config['GLOBAL_CLUSTERS'][clusterid]['key']}\n try:\n req = urllib2.Request(target, headers=headers)\n res = urllib2.urlopen(req, timeout=app.config['REMOTE_TIMEOUT'])\n return json.loads(res.read())[clusterid]\n except Exception as err:\n logger.exception(\"Error grabbing stats for %s: %s\" % (clusterid, err))\n return None", "metadata": "root._get_remote_stats", "header": "['module', '___EOS___']", "index": 63 }, { "content": "def _get_users_theme(username):\n q = list(r.table(\"users\").filter({\"username\": username}).pluck({\"theme\": True}).run(rdb.conn))[0]\n return q.get('theme', 'cerulean')", "metadata": "root._get_users_theme", "header": "['module', '___EOS___']", "index": 75 }, { "content": "def _rand_start():\n \"\"\"Used to randomize the first check (and hopefully stagger\n checks on a single host)\"\"\"\n return time() + randint(1, 600)", "metadata": "root._rand_start", "header": "['module', '___EOS___']", "index": 80 }, { "content": "def _valid_registration(content):\n fields = [('hostname', basestring), ('checks', dict), ('roles', list)]\n for field in fields:\n if field[0] in content:\n if not isinstance(content[field[0]], field[1]):\n return False\n else:\n return False\n # validate checks each should have a interval and args field\n for check in content['checks']:\n if not isinstance(content['checks'][check], dict):\n return False\n if 'interval' not in content['checks'][check]:\n return False\n if not isinstance(content['checks'][check]['interval'], int):\n return False\n if not isinstance(content['checks'][check]['follow_up'], int):\n return False\n if 'args' not in content['checks'][check]:\n return False\n if 'priority' in content['checks'][check]:\n if not isinstance(content['checks'][check]['priority'], int):\n return False\n if not isinstance(content['checks'][check]['args'], basestring):\n return False\n # everything checked out\n return True", "metadata": "root._valid_registration", "header": "['module', '___EOS___']", "index": 86 }, { "content": "@app.route(\"/register\", methods=['POST', 'PUT'])\ndef register():\n if request.headers.get('X-REGISTER-KEY') != app.config['REGISTER_KEY']:\n abort(412)\n if not request.json:\n abort(400)\n if not _valid_registration(request.json):\n abort(400)\n hid = request.json['hostname']\n checks = request.json['checks']\n roles = request.json['roles']\n ip_addr = request.json.get('ip', request.remote_addr)\n if ip_addr == '':\n ip_addr = request.remote_addr\n try:\n pkey = genPrimaryKey64(\"%s%s\" % (hid, ip_addr))\n q = r.table(\"hosts\").insert({\n \"id\": pkey,\n \"hostname\": hid,\n \"ip\": ip_addr,\n \"checks\": checks,\n \"roles\": roles\n },conflict=\"update\").run(rdb.conn)\n q = r.table(\"checks\").filter({\"hostname\": hid}).delete().run(rdb.conn) #we're about to reinstart all so just delete all incase checks got removed\n bulk_load = []\n for i in checks:\n bulk_load.append({'id': genPrimaryKey64(\"%s%s%s\" % (hid, ip_addr, i)),\n 'hostname': hid, 'ip': ip_addr,\n 'check': i, 'last': 0, 'next': _rand_start(),\n 'interval': checks[i]['interval'],\n 'follow_up': checks[i]['follow_up'],\n 'pending': False,\n 'status': None, 'in_maintenance': False,\n 'suspended': False, 'out': '',\n 'priority': checks[i].get('priority', 1)})\n q = r.table(\"checks\").insert(bulk_load, conflict=\"update\").run(rdb.conn)\n except Exception as err:\n logger.error(err)\n return jsonify({'status': 'fail', 'error': str(err)}), 400\n return jsonify({'status': 'ok'})", "metadata": "root.register", "header": "['module', '___EOS___']", "index": 115 }, { "content": "@app.route(\"/user/\", defaults={'username': None})\[email protected](\"/user/<username>\", methods=['GET', 'POST', 'DELETE'])\n@login_required\ndef users(username):\n if not username:\n if request.method == 'DELETE':\n abort(400) # don't allow deletes with out user\n if session.get('username', False):\n username = session.get('username')\n else:\n abort(400)\n if request.method == 'GET':\n q = list(r.table(\"users\").filter({\"username\": username}).without(\"hash\").run(rdb.conn))[0]\n if q:\n if 'theme' not in q:\n q['theme'] = 'cerulean'\n return jsonify(q)\n else:\n abort(404)\n elif request.method == 'DELETE':\n return jsonify({'success': remove_user(username)})\n elif request.method == 'POST':\n fields = {}\n if not request.json:\n abort(400)\n if 'theme' in request.json:\n if request.json['theme'] in app.config['THEMES']:\n fields['theme'] = request.json['theme']\n else:\n abort(400)\n if 'email' in request.json:\n fields['email'] = request.json['email']\n q = r.table(\"users\").filter({\"username\": username}).update(fields).run(rdb.conn) \n if q[\"replaced\"] != 0 :\n if session and 'theme' in fields:\n session['theme'] = fields['theme']\n return jsonify({'success': True})\n else:\n return jsonify({'success': False})", "metadata": "root.users", "header": "['module', '___EOS___']", "index": 157 }, { "content": "@app.route(\"/hosts/\", defaults={'host': None})\[email protected](\"/hosts/<host>\", methods=['GET', 'DELETE'])\n@login_required\ndef hosts(host):\n \"\"\"Delete a given host and all its checks\"\"\"\n if not host:\n q = list(r.table(\"hosts\").without(\"id\").run(rdb.conn))\n if q:\n q = {'hosts': q}\n else:\n if request.method == 'DELETE':\n q = r.table(\"checks\").filter((r.row[\"hostname\"] == host) \| (r.row[\"ip\"] == host)).delete().run(rdb.conn)\n q = r.table(\"hosts\").filter((r.row[\"hostname\"] == host) \| (r.row[\"ip\"] == host)).delete().run(rdb.conn)\n return jsonify({'success': True})\n else:\n q = list(r.table(\"hosts\").filter((r.row[\"hostname\"] == host) \| (r.row[\"ip\"] == host)).without(\"id\").run(rdb.conn))\n if q:\n return jsonify(q[0])\n else:\n abort(404)", "metadata": "root.hosts", "header": "['module', '___EOS___']", "index": 198 }, { "content": "@app.route(\"/checks/\", defaults={'host': None})\[email protected](\"/checks/host/<host>\")\n@login_required\ndef checks(host):\n \"\"\"Get all checks for a given hostname or ip\"\"\"\n if not host:\n q = list(r.table(\"checks\").run(rdb.conn))\n else:\n q = list(r.table(\"checks\").filter((r.row[\"hostname\"] == host) \| (r.row[\"ip\"] == host)).run(rdb.conn))\n if q:\n for check in q:\n check['id'] = str(check['id'])\n return jsonify({'checks': q})\n else:\n abort(404)", "metadata": "root.checks", "header": "['module', '___EOS___']", "index": 220 }, { "content": "@app.route('/checks/id/<checkid>', methods=['GET', 'DELETE'])\n@login_required\ndef checks_by_id(checkid):\n \"\"\"Get info for or delete a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'DELETE':\n q = r.table(\"checks\").get(checkid).delete().run(rdb.conn)\n if q[\"deleted\"] == 1:\n return jsonify({'success': True})\n else:\n return jsonify({'success': False})", "metadata": "root.checks_by_id", "header": "['module', '___EOS___']", "index": 237 }, { "content": "@app.route('/checks/id/<checkid>/owner', methods=['GET', 'POST', 'DELETE'])\n@login_required\ndef check_owner(checkid):\n \"\"\"claim or unclaim a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n try:\n if request.json.get('owner'):\n q = r.table(\"checks\").get(checkid).update({\"owner\": str(request.json[\"owner\"])}).run(rdb.conn)\n else:\n abort(400)\n if q[\"replaced\"] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)\n elif request.method == 'DELETE':\n try:\n q = r.table(\"checks\").get(checkid).update({\"owner\": \"\"}).run(rdb.conn)\n if q[\"replaced\"] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)", "metadata": "root.check_owner", "header": "['module', '___EOS___']", "index": 256 }, { "content": "@app.route('/checks/id/<checkid>/next', methods=['GET', 'POST'])\n@login_required\ndef check_next(checkid):\n \"\"\"Reschedule a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n try:\n if not request.json.get('next'):\n abort(400)\n if request.json.get('next') == 'now':\n q = r.table(\"checks\").get(checkid).update({\"next\": time() - 1}).run(rdb.conn)\n else:\n q = r.table(\"checks\").get(checkid).update({\"next\": int(request.json[\"next\"])}).run(rdb.conn)\n if q[\"replaced\"] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)", "metadata": "root.check_next", "header": "['module', '___EOS___']", "index": 294 }, { "content": "@app.route('/checks/id/<checkid>/suspended', methods=['GET', 'POST'])\n@login_required\ndef check_suspended(checkid):\n \"\"\"Suspend a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n try:\n if not request.json.get('suspended'):\n abort(400)\n if request.json.get('suspended') is True:\n q = r.table(\"checks\").get(checkid).update({\"suspended\": True}).run(rdb.conn)\n elif request.json.get('suspended') is False:\n q = r.table(\"checks\").get(checkid).update({\"suspended\": False}).run(rdb.conn)\n else:\n abort(400)\n if q['replaced'] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)", "metadata": "root.check_suspended", "header": "['module', '___EOS___']", "index": 324 }, { "content": "@app.route('/checks/state/<state>')\n@login_required\ndef check_state(state):\n \"\"\"List of checks in cluster in a given state [alerting/pending/suspended]\"\"\"\n if state == 'alerting':\n q = list(r.table(\"checks\").get_all(False, index=\"status\").run(rdb.conn))\n if q:\n return jsonify({'alerting': q})\n else:\n return jsonify({'alerting': []})\n elif state == 'pending':\n q = list(r.table(\"checks\").get_all(True, index=\"pending\").run(rdb.conn))\n if q:\n return jsonify({'pending': q})\n else:\n return jsonify({'pending': []})\n elif state == 'in_maintenance':\n q = list(r.table(\"checks\").get_all(True, index=\"in_maintenance\").run(rdb.conn))\n if q:\n return jsonify({'in_maintenance': q})\n else:\n return jsonify({'in_maintenance': []})\n elif state == 'suspended':\n q = list(r.table(\"checks\").get_all(True, index=\"suspended\").run(rdb.conn))\n if q:\n return jsonify({'suspended': q})\n else:\n return jsonify({'suspended': []})\n else:\n abort(400)", "metadata": "root.check_state", "header": "['module', '___EOS___']", "index": 356 }, { "content": "@app.route('/state_log/<hostname>/<checkname>', methods=['GET'])\n@login_required\ndef state_log_by_check(hostname, checkname):\n \"\"\"Get check history for a given check on a given host\"\"\"\n if request.method == 'GET':\n try:\n limit = request.args.get('limit', 10, type=int)\n except ValueError:\n abort(400)\n log = list(r.table(\"state_log\").filter({\"hostname\": hostname, \"check\": checkname}).order_by(r.desc(\"last\")).limit(limit).run(rdb.conn))\n if log:\n return jsonify({'state_log': sorted(log, key=lambda k: k['last'])})\n else:\n abort(404)\n else:\n abort(400)", "metadata": "root.state_log_by_check", "header": "['module', '___EOS___']", "index": 388 }, { "content": "@app.route('/notes/<hostname>', methods=['GET', 'POST'])\n@login_required\ndef list_notes(hostname):\n \"\"\"Retrieve a list of notes associated with a host. Or given\n {'user': 'username', 'note': 'some message'} post a note.\"\"\"\n if request.method == 'GET':\n try:\n #someday i should probably add offset support here and in the statelog\n limit = request.args.get('limit', 50, type=int)\n except ValueError:\n abort(400)\n notes = list(r.table(\"notes\").filter({\"hostname\": hostname}).order_by(r.desc(\"ts\")).limit(limit).run(rdb.conn))\n if notes:\n return jsonify({'notes': sorted(notes, key=lambda k: k['ts'])})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n if not request.json.get(\"user\") or not request.json.get(\"note\"):\n abort(400)\n if not r.table(\"hosts\").get_all(hostname, index=\"hostname\").run(rdb.conn):\n abort(404)\n alerting = [x[\"check\"] for x in r.table(\"checks\").filter({\"h stname\": hostname, \"status\": False}).run(rdb.conn)]\n q = r.table(\"notes\").insert({'hostname': hostname, 'user': request.json.get(\"user\"),\n 'note': request.json.get(\"note\"), 'ts': time(), 'alerting': alerting}).run(rdb.conn)\n if q[\"inserted\"] == 1:\n return jsonify({'success': True})\n else:\n logger.error(q)\n abort(500)\n else:\n abort(400)", "metadata": "root.list_notes", "header": "['module', '___EOS___']", "index": 406 }, { "content": "@app.route('/global/clusters')\n@login_required\ndef global_clusters():\n \"\"\"List of known clusters and their id\"\"\"\n return jsonify({'clusters': app.config['GLOBAL_CLUSTERS']})", "metadata": "root.global_clusters", "header": "['module', '___EOS___']", "index": 441 }, { "content": "@app.route('/global/<clusterid>/checks/state/<state>')\n@login_required\ndef global_check_state(clusterid, state):\n \"\"\"Get a list of all checks in provided state for a given cluster\"\"\"\n if clusterid not in app.config['GLOBAL_CLUSTERS']:\n abort(400)\n if state in VALID_STATES:\n ckey = '%s:%s' % (clusterid, state)\n cached = cache.get(ckey)\n if cached:\n return jsonify({clusterid: cached})\n else:\n q = _get_remote_checks(clusterid, state)\n if q:\n cache.set(ckey, q)\n return jsonify({clusterid: q})\n else:\n abort(500)\n else:\n abort(400)", "metadata": "root.global_check_state", "header": "['module', '___EOS___']", "index": 448 }, { "content": "@app.route('/stats', defaults={'clusterid': None})\[email protected]('/stats/<clusterid>')\n@login_required\ndef stalker_stats(clusterid):\n \"\"\"Obtain stats for this cluster or one with a given clusterid\"\"\"\n default = {'qsize': None, 'failing': None, 'flapping': None,\n 'suspended': None, 'checks': None, 'pending': None}\n if not clusterid:\n q = _get_local_metrics()\n if q:\n return jsonify({app.config['LOCAL_CID']: q})\n else:\n return jsonify({app.config['LOCAL_CID']: default})\n else:\n if clusterid in app.config['GLOBAL_CLUSTERS']:\n ckey = '%s:%s' % (clusterid, 'stats')\n cached = cache.get(ckey)\n if cached:\n return jsonify({clusterid: cached})\n else:\n q = _get_remote_stats(clusterid)\n if q:\n cache.set(ckey, q)\n return jsonify({clusterid: q})\n else:\n return jsonify({clusterid: default})\n elif clusterid == 'all':\n q = {}\n q[app.config['LOCAL_CID']] = _get_local_metrics()\n for cid in app.config['GLOBAL_CLUSTERS'].keys():\n ckey = '%s:%s' % (cid, 'stats')\n cached = cache.get(ckey)\n if cached:\n q[cid] = cached\n else:\n q[cid] = _get_remote_stats(cid)\n if not q[cid]:\n q[cid] = default\n cache.set(ckey, q[cid])\n return jsonify({'all': q})\n else:\n abort(404)", "metadata": "root.stalker_stats", "header": "['module', '___EOS___']", "index": 470 }, { "content": "@app.route('/findhost')\n@login_required\ndef findhost():\n \"\"\"Just used for the type ahead\"\"\"\n # probably should cache hosts in memcached/redis for type ahead crap\n if not request.args.get('q'):\n abort(400)\n result = []\n for i in r.table(\"hosts\").filter(\n r.row[\"hostname\"].match(\"^%s\" % request.args.get('q')) \| r.row[\"ip\"].match(\"^%s\" % request.args.get('q'))\n ).pluck({\"hostname\": True, \"ip\": True}).run(rdb.conn):\n if i['hostname'].startswith(request.args.get('q')):\n result.append(i['hostname'])\n else:\n result.append(i['ip'])\n return \",\".join(result)", "metadata": "root.findhost", "header": "['module', '___EOS___']", "index": 514 }, { "content": "@app.route('/')\n@login_required\ndef index():\n return render_template('states.html', state='alerting')", "metadata": "root.index", "header": "['module', '___EOS___']", "index": 532 }, { "content": "@app.route('/view/states', defaults={'state': None})\[email protected]('/view/states/<state>')\n@login_required\ndef view_states(state):\n if state:\n if state in VALID_STATES:\n return render_template('states.html', state=state)\n else:\n abort(404)\n else:\n return render_template('states.html', state='alerting')", "metadata": "root.view_states", "header": "['module', '___EOS___']", "index": 538 }, { "content": "@app.route('/view/checks')\n@login_required\ndef view_checks():\n return render_template('allchecks.html')", "metadata": "root.view_checks", "header": "['module', '___EOS___']", "index": 551 }, { "content": "@app.route('/view/host/', defaults={'hostname': None})\[email protected]('/view/host/<hostname>')\n@login_required\ndef view_single_host(hostname):\n if request.args.get('search'):\n hostname = request.args.get('search')\n if not hostname:\n abort(404)\n else:\n return render_template('host.html', target=hostname)", "metadata": "root.view_single_host", "header": "['module', '___EOS___']", "index": 557 }, { "content": "@app.route('/view/user/<username>')\n@login_required\ndef view_user(username):\n return render_template('user.html')", "metadata": "root.view_user", "header": "['module', '___EOS___']", "index": 569 }, { "content": "@app.route('/global/view/states', defaults={'state': None})\[email protected]('/global/view/states/<state>/')\n@login_required\ndef view_global(state):\n \"\"\"Global view of provided state [alerting/pending/suspended]\"\"\"\n if state:\n if state in VALID_STATES:\n return render_template('globalstates.html', state=state)\n else:\n abort(404)\n else:\n return render_template('globalstates.html', state='alerting')", "metadata": "root.view_global", "header": "['module', '___EOS___']", "index": 575 }, { "content": "@app.route('/signout')\ndef signout():\n \"\"\"Sign out\"\"\"\n session.pop('logged_in', None)\n return render_template('signout.html')", "metadata": "root.signout", "header": "['module', '___EOS___']", "index": 589 }, { "content": "@app.route('/signin', methods=[\"GET\", \"POST\"])\ndef signin():\n \"\"\"Sign in\"\"\"\n form = SignInForm()\n if form.validate_on_submit():\n username = form.username.data.strip()\n password = form.password.data.strip()\n if is_valid_login(username, password):\n session['theme'] = _get_users_theme(username)\n session['logged_in'] = True\n session['username'] = username\n if form.remember_me.data:\n session.permanent = True\n else:\n session.permanent = False\n if request.args.get('next') == 'signin':\n return redirect(\"/\")\n else:\n return redirect(request.args.get('next') or request.referrer or \"/\")\n else:\n return render_template('signin.html', form=form, error=\"Failed\")\n return render_template('signin.html', form=form, error=None)", "metadata": "root.signin", "header": "['module', '___EOS___']", "index": 596 }, { "content": "@app.errorhandler(404)\ndef page_not_found(e):\n return render_template('404.html'), 404", "metadata": "root.page_not_found", "header": "['module', '___EOS___']", "index": 620 }, { "content": "@app.route('/routes/list', methods=['GET'])\n@login_required\ndef help():\n \"\"\"Show endpoints\"\"\"\n func_list = {}\n for rule in app.url_map.iter_rules():\n if rule.endpoint != 'static':\n func_list[rule.rule] = app.view_functions[rule.endpoint].__doc__\n return jsonify(func_list)", "metadata": "root.help", "header": "['module', '___EOS___']", "index": 625 } ]	[ { "span": "from bson import ObjectId", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 25 }, { "span": "from rethinkdb.errors import RqlDriverError, RqlRuntimeError", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 60 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "json_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "eventlet_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "eventlet_", "._", "monkey", "\\u", "patch_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "eventlet_", "._", "green_", "import_", "urllib2_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "flask_", "import_", "request_", ",_", "abort_", ",_", "render", "\\u", "template_", ",_", "session_", ",_", "redirect_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "bson_", "import_", "Object", "Id_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "time_", "import_", "time_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "random_", "import_", "randint_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "stal", "ker", "web_", "._", "auth_", "import_", "is", "\\u", "valid", "\\u", 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Unused import	arctic-nmt/nmt/nmt/homogeneous_data.py	[ { "content": "import numpy\n\nimport itertools\nimport operator\n\nfrom tm_dataset import PytablesBitextIterator \n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class HomogenousData(PytablesBitextIterator):\n\n\n", "metadata": "root.HomogenousData", "header": "['module', '___EOS___']", "index": 7 }, { "content": " def __init__(self, args, kwargs):\n PytablesBitextIterator.__init__(self, args, *kwargs)\n self.batch_iter = None", "metadata": "root.HomogenousData.__init__", "header": "['class', 'HomogenousData', '(', 'PytablesBitextIterator', ')', ':', '___EOS___']", "index": 9 }, { "content": " def get_homogenous_batch_iter(self):\n end_of_iter = False\n while True:\n k_batches = 10\n batch_size = self.batch_size\n x = []\n y = []\n for k in xrange(k_batches):\n try:\n dx, dy = PytablesBitextIterator.next(self)\n except StopIteration:\n end_of_iter = True\n break\n if dx == None or dy == None:\n break\n x += dx\n y += dy\n if len(x) <= 0 or len(y) <= 0:\n raise StopIteration\n lens = numpy.asarray([map(len, x), map(len, y)])\n order = numpy.argsort(lens.max(axis=0)) if k_batches > 1 else numpy.arange(len(x))\n for k in range(k_batches):\n if k batch_size > len(order):\n break\n indices = order[k * batch_size:(k + 1) * batch_size]\n yield [[x[ii] for ii in indices], [y[ii] for ii in indices]]\n\n if end_of_iter:\n raise StopIteration", "metadata": "root.HomogenousData.get_homogenous_batch_iter", "header": "['class', 'HomogenousData', '(', 'PytablesBitextIterator', ')', ':', '___EOS___']", "index": 13 }, { "content": " def next(self, peek=False):\n if not self.batch_iter:\n self.batch_iter = self.get_homogenous_batch_iter()\n if not self.batch_iter:\n raise StopIteration\n try:\n batch = next(self.batch_iter)\n except StopIteration:\n self.batch_iter = None\n raise StopIteration\n\n return batch[0], batch[1]", "metadata": "root.HomogenousData.next", "header": "['class', 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Unused import	CollabQ/CollabQ/.google_appengine/google/appengine/api/datastore_entities.py	[ { "content": "#!/usr/bin/env python\n#\n# Copyright 2007 Google Inc.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n#\n\n\"\"\"Classes for common kinds, including Contact, Message, and Event.\n\nMost of these kinds are based on the gd namespace \"kinds\" from GData:\n\n http://code.google.com/apis/gdata/common-elements.html\n\"\"\"\n\n\n\n\n\nimport types\nimport urlparse\nfrom xml.sax import saxutils\nfrom google.appengine.datastore import datastore_pb\nfrom google.appengine.api import datastore\nfrom google.appengine.api import datastore_errors\nfrom google.appengine.api import datastore_types\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class GdKind(datastore.Entity):\n \"\"\" A base class for gd namespace kinds.\n\n This class contains common logic for all gd namespace kinds. For example,\n this class translates datastore (app id, kind, key) tuples to tag:\n URIs appropriate for use in <key> tags.\n \"\"\"\n\n HEADER = u\"\"\"<entry xmlns:gd='http://schemas.google.com/g/2005'>\n <category scheme='http://schemas.google.com/g/2005#kind'\n term='http://schemas.google.com/g/2005#%s' />\"\"\"\n FOOTER = u\"\"\"\n</entry>\"\"\"\n\n _kind_properties = set()\n _contact_properties = set()\n\n\n\n\n\n\n", "metadata": "root.GdKind", "header": "['module', '___EOS___']", "index": 36 }, { "content": " def __init__(self, kind, title, kind_properties, contact_properties=[]):\n \"\"\" Ctor.\n\n title is the name of this particular entity, e.g. Bob Jones or Mom's\n Birthday Party.\n\n kind_properties is a list of property names that should be included in\n this entity's XML encoding as first-class XML elements, instead of\n <property> elements. 'title' and 'content' are added to kind_properties\n automatically, and may not appear in contact_properties.\n\n contact_properties is a list of property names that are Keys that point to\n Contact entities, and should be included in this entity's XML encoding as\n <gd:who> elements. If a property name is included in both kind_properties\n and contact_properties, it is treated as a Contact property.\n\n Args:\n kind: string\n title: string\n kind_properties: list of strings\n contact_properties: list of string\n \"\"\"\n datastore.Entity.__init__(self, kind)\n\n if not isinstance(title, types.StringTypes):\n raise datastore_errors.BadValueError(\n 'Expected a string for title; received %s (a %s).' %\n (title, datastore_types.typename(title)))\n self['title'] = title\n self['content'] = ''\n\n self._contact_properties = set(contact_properties)\n assert not self._contact_properties.intersection(self.keys())\n\n self._kind_properties = set(kind_properties) - self._contact_properties\n self._kind_properties.add('title')\n self._kind_properties.add('content')", "metadata": "root.GdKind.__init__", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 53 }, { "content": " def _KindPropertiesToXml(self):\n \"\"\" Convert the properties that are part of this gd kind to XML. For\n testability, the XML elements in the output are sorted alphabetically\n by property name.\n\n Returns:\n string # the XML representation of the gd kind properties\n \"\"\"\n properties = self._kind_properties.intersection(set(self.keys()))\n\n xml = u''\n for prop in sorted(properties):\n prop_xml = saxutils.quoteattr(prop)[1:-1]\n\n value = self[prop]\n has_toxml = (hasattr(value, 'ToXml') or\n isinstance(value, list) and hasattr(value[0], 'ToXml'))\n\n for val in self._XmlEscapeValues(prop):\n if has_toxml:\n xml += '\\n %s' % val\n else:\n xml += '\\n <%s>%s</%s>' % (prop_xml, val, prop_xml)\n\n return xml", "metadata": "root.GdKind._KindPropertiesToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 91 }, { "content": " def _ContactPropertiesToXml(self):\n \"\"\" Convert this kind's Contact properties kind to XML. For testability,\n the XML elements in the output are sorted alphabetically by property name.\n\n Returns:\n string # the XML representation of the Contact properties\n \"\"\"\n properties = self._contact_properties.intersection(set(self.keys()))\n\n xml = u''\n for prop in sorted(properties):\n values = self[prop]\n if not isinstance(values, list):\n values = [values]\n\n for value in values:\n assert isinstance(value, datastore_types.Key)\n xml += \"\"\"\n <gd:who rel=\"http://schemas.google.com/g/2005#%s.%s>\n <gd:entryLink href=\"%s\" />\n </gd:who>\"\"\" % (self.kind().lower(), prop, value.ToTagUri())\n\n return xml", "metadata": "root.GdKind._ContactPropertiesToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 118 }, { "content": " def _LeftoverPropertiesToXml(self):\n \"\"\" Convert all of this entity's properties that aren't part of this gd\n kind to XML.\n\n Returns:\n string # the XML representation of the leftover properties\n \"\"\"\n leftovers = set(self.keys())\n leftovers -= self._kind_properties\n leftovers -= self._contact_properties\n if leftovers:\n return u'\\n ' + '\\n '.join(self._PropertiesToXml(leftovers))\n else:\n return u''", "metadata": "root.GdKind._LeftoverPropertiesToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 143 }, { "content": " def ToXml(self):\n \"\"\" Returns an XML representation of this entity, as a string.\n \"\"\"\n xml = GdKind.HEADER % self.kind().lower()\n xml += self._KindPropertiesToXml()\n xml += self._ContactPropertiesToXml()\n xml += self._LeftoverPropertiesToXml()\n xml += GdKind.FOOTER\n return xml", "metadata": "root.GdKind.ToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 158 }, { "content": "class Message(GdKind):\n \"\"\"A message, such as an email, a discussion group posting, or a comment.\n\n Includes the message title, contents, participants, and other properties.\n\n This is the gd Message kind. See:\n http://code.google.com/apis/gdata/common-elements.html#gdMessageKind\n\n These properties are meaningful. They are all optional.\n\n property name property type meaning\n -------------------------------------\n title string message subject\n content string message body\n from Contact* sender\n to Contact* primary recipient\n cc Contact* CC recipient\n bcc Contact* BCC recipient\n reply-to Contact* intended recipient of replies\n link Link* attachment\n category Category* tag or label associated with this message\n geoPt GeoPt* geographic location the message was posted from\n rating Rating* message rating, as defined by the application\n\n * means this property may be repeated.\n\n The Contact properties should be Keys of Contact entities. They are\n represented in the XML encoding as linked <gd:who> elements.\n \"\"\"\n KIND_PROPERTIES = ['title', 'content', 'link', 'category', 'geoPt', 'rating']\n CONTACT_PROPERTIES = ['from', 'to', 'cc', 'bcc', 'reply-to']\n", "metadata": "root.Message", "header": "['module', '___EOS___']", "index": 169 }, { "content": " def __init__(self, title, kind='Message'):\n GdKind.__init__(self, kind, title, Message.KIND_PROPERTIES,\n Message.CONTACT_PROPERTIES)", "metadata": "root.Message.__init__", "header": "['class', 'Message', '(', 'GdKind', ')', ':', '___EOS___']", "index": 201 }, { "content": "class Event(GdKind):\n \"\"\"A calendar event.\n\n Includes the event title, description, location, organizer, start and end\n time, and other details.\n\n This is the gd Event kind. See:\n http://code.google.com/apis/gdata/common-elements.html#gdEventKind\n\n These properties are meaningful. They are all optional.\n\n property name property type meaning\n -------------------------------------\n title string event name\n content string event description\n author string the organizer's name\n where string* human-readable location (not a GeoPt)\n startTime timestamp start time\n endTime timestamp end time\n eventStatus string one of the Event.Status values\n link Link* page with more information\n category Category* tag or label associated with this event\n attendee Contact* attendees and other related people\n\n * means this property may be repeated.\n\n The Contact properties should be Keys of Contact entities. They are\n represented in the XML encoding as linked <gd:who> elements.\n \"\"\"\n KIND_PROPERTIES = ['title', 'content', 'author', 'where', 'startTime',\n 'endTime', 'eventStatus', 'link', 'category']\n CONTACT_PROPERTIES = ['attendee']\n\n class Status:\n CONFIRMED = 'confirmed'\n TENTATIVE = 'tentative'\n CANCELED = 'canceled'\n\n", "metadata": "root.Event", "header": "['module', '___EOS___']", "index": 206 }, { "content": " def __init__(self, title, kind='Event'):\n GdKind.__init__(self, kind, title, Event.KIND_PROPERTIES,\n Event.CONTACT_PROPERTIES)", "metadata": "root.Event.__init__", "header": "['class', 'Event', '(', 'GdKind', ')', ':', '___EOS___']", "index": 244 }, { "content": " def ToXml(self):\n \"\"\" Override GdKind.ToXml() to special-case author, gd:where, gd:when, and\n gd:eventStatus.\n \"\"\"\n xml = GdKind.HEADER % self.kind().lower()\n\n self._kind_properties = set(Contact.KIND_PROPERTIES)\n xml += self._KindPropertiesToXml()\n\n if 'author' in self:\n xml += \"\"\"\n <author><name>%s</name></author>\"\"\" % self['author']\n\n if 'eventStatus' in self:\n xml += \"\"\"\n <gd:eventStatus value=\"http://schemas.google.com/g/2005#event.%s\" />\"\"\" % (\n self['eventStatus'])\n\n if 'where' in self:\n lines = ['<gd:where valueString=\"%s\" />' % val\n for val in self._XmlEscapeValues('where')]\n xml += '\\n ' + '\\n '.join(lines)\n\n iso_format = '%Y-%m-%dT%H:%M:%S'\n xml += '\\n <gd:when'\n for key in ['startTime', 'endTime']:\n if key in self:\n xml += ' %s=\"%s\"' % (key, self[key].isoformat())\n xml += ' />'\n\n self._kind_properties.update(['author', 'where', 'startTime', 'endTime',\n 'eventStatus'])\n xml += self._ContactPropertiesToXml()\n xml += self._LeftoverPropertiesToXml()\n xml += GdKind.FOOTER\n return xml", "metadata": "root.Event.ToXml", "header": "['class', 'Event', '(', 'GdKind', ')', ':', '___EOS___']", "index": 248 }, { "content": "class Contact(GdKind):\n \"\"\"A contact: a person, a venue such as a club or a restaurant, or an\n organization.\n\n This is the gd Contact kind. See:\n http://code.google.com/apis/gdata/common-elements.html#gdContactKind\n\n Most of the information about the contact is in the <gd:contactSection>\n element; see the reference section for that element for details.\n\n These properties are meaningful. They are all optional.\n\n property name property type meaning\n -------------------------------------\n title string contact's name\n content string notes\n email Email* email address\n geoPt GeoPt* geographic location\n im IM* IM address\n phoneNumber Phonenumber* phone number\n postalAddress PostalAddress* mailing address\n link Link* link to more information\n category Category* tag or label associated with this contact\n\n * means this property may be repeated.\n \"\"\"\n CONTACT_SECTION_HEADER = \"\"\"\n <gd:contactSection>\"\"\"\n CONTACT_SECTION_FOOTER = \"\"\"\n </gd:contactSection>\"\"\"\n\n KIND_PROPERTIES = ['title', 'content', 'link', 'category']\n\n CONTACT_SECTION_PROPERTIES = ['email', 'geoPt', 'im', 'phoneNumber',\n 'postalAddress']\n\n", "metadata": "root.Contact", "header": "['module', '___EOS___']", "index": 286 }, { "content": " def __init__(self, title, kind='Contact'):\n GdKind.__init__(self, kind, title, Contact.KIND_PROPERTIES)", "metadata": "root.Contact.__init__", "header": "['class', 'Contact', '(', 'GdKind', ')', ':', '___EOS___']", "index": 322 }, { "content": " def ToXml(self):\n \"\"\" Override GdKind.ToXml() to put some properties inside a\n gd:contactSection.\n \"\"\"\n xml = GdKind.HEADER % self.kind().lower()\n\n self._kind_properties = set(Contact.KIND_PROPERTIES)\n xml += self._KindPropertiesToXml()\n\n xml += Contact.CONTACT_SECTION_HEADER\n self._kind_properties = set(Contact.CONTACT_SECTION_PROPERTIES)\n xml += self._KindPropertiesToXml()\n xml += Contact.CONTACT_SECTION_FOOTER\n\n self._kind_properties.update(Contact.KIND_PROPERTIES)\n xml += self._LeftoverPropertiesToXml()\n xml += GdKind.FOOTER\n return xml", "metadata": "root.Contact.ToXml", "header": "['class', 'Contact', '(', 'GdKind', ')', ':', '___EOS___']", "index": 325 } ]	[ { "span": "import urlparse", "start_line": 29, "start_column": 0, "end_line": 29, "end_column": 15 }, { "span": "from google.appengine.datastore import datastore_pb", 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Except block handles 'BaseException'	glenjarvis/ansible_tutorial/src/example_03/ansible_module.py	[ { "content": "def get_distribution():\n ''' return the distribution name '''\n if platform.system() == 'Linux':\n try:\n distribution = platform.linux_distribution()[0].capitalize()\n if not distribution and os.path.isfile('/etc/system-release'):\n distribution = platform.linux_distribution(supported_dists=['system'])[0].capitalize()\n if 'Amazon' in distribution:\n distribution = 'Amazon'\n else:\n distribution = 'OtherLinux'\n except:\n # FIXME: MethodMissing, I assume?\n distribution = platform.dist()[0].capitalize()\n else:\n distribution = None\n return distribution", "metadata": "root.get_distribution", "header": "['module', '___EOS___']", "index": 286 }, { "content": " def is_nfs_path(self, path):\n \"\"\"\n Returns a tuple containing (True, selinux_context) if the given path\n is on a NFS mount point, otherwise the return will be (False, None).\n \"\"\"\n try:\n f = open('/proc/mounts', 'r')\n mount_data = f.readlines()\n f.close()\n except:\n return (False, None)\n path_mount_point = self.find_mount_point(path)\n for line in mount_data:\n (device, mount_point, fstype, options, rest) = line.split(' ', 4)\n if path_mount_point == mount_point and 'nfs' in fstype:\n nfs_context = self.selinux_context(path_mount_point)\n return (True, nfs_context)\n return (False, None)", "metadata": "root.AnsibleModule.is_nfs_path", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 517 }, { "content": " def _check_argument_types(self):\n ''' ensure all arguments have the requested type '''\n for (k, v) in self.argument_spec.iteritems():\n wanted = v.get('type', None)\n if wanted is None:\n continue\n if k not in self.params:\n continue\n\n value = self.params[k]\n is_invalid = False\n\n if wanted == 'str':\n if not isinstance(value, basestring):\n self.params[k] = str(value)\n elif wanted == 'list':\n if not isinstance(value, list):\n if isinstance(value, basestring):\n self.params[k] = value.split(\",\")\n elif isinstance(value, int) or isinstance(value, float):\n self.params[k] = [ str(value) ]\n else:\n is_invalid = True\n elif wanted == 'dict':\n if not isinstance(value, dict):\n if isinstance(value, basestring):\n if value.startswith(\"{\"):\n try:\n self.params[k] = json.loads(value)\n except:\n (result, exc) = self.safe_eval(value, dict(), include_exceptions=True)\n if exc is not None:\n self.fail_json(msg=\"unable to evaluate dictionary for %s\" % k)\n self.params[k] = result\n elif '=' in value:\n self.params[k] = dict([x.split(\"=\", 1) for x in value.split(\",\")])\n else:\n self.fail_json(msg=\"dictionary requested, could not parse JSON or key=value\")\n else:\n is_invalid = True\n elif wanted == 'bool':\n if not isinstance(value, bool):\n if isinstance(value, basestring):\n self.params[k] = self.boolean(value)\n else:\n is_invalid = True\n elif wanted == 'int':\n if not isinstance(value, int):\n if isinstance(value, basestring):\n self.params[k] = int(value)\n else:\n is_invalid = True\n elif wanted == 'float':\n if not isinstance(value, float):\n if isinstance(value, basestring):\n self.params[k] = float(value)\n else:\n is_invalid = True\n else:\n self.fail_json(msg=\"implementation error: unknown type %s requested for %s\" % (wanted, k))\n\n if is_invalid:\n self.fail_json(msg=\"argument %s is of invalid type: %s, required: %s\" % (k, type(value), wanted))", "metadata": "root.AnsibleModule._check_argument_types", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 825 }, { "content": " def _set_cwd(self):\n try:\n cwd = os.getcwd()\n if not os.access(cwd, os.F_OK\|os.R_OK):\n raise\n return cwd\n except:\n # we don't have access to the cwd, probably because of sudo. \n # Try and move to a neutral location to prevent errors\n for cwd in [os.path.expandvars('$HOME'), tempfile.gettempdir()]:\n try:\n if os.access(cwd, os.F_OK\|os.R_OK):\n os.chdir(cwd)\n return cwd\n except:\n pass\n # we won't error here, as it may not be a problem, \n # and we don't want to break modules unnecessarily\n return None ", "metadata": "root.AnsibleModule._set_cwd", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 986 }, { "content": " def run_command(self, args, check_rc=False, close_fds=False, executable=None, data=None, binary_data=False, path_prefix=None, cwd=None, use_unsafe_shell=False):\n '''\n Execute a command, returns rc, stdout, and stderr.\n args is the command to run\n If args is a list, the command will be run with shell=False.\n If args is a string and use_unsafe_shell=False it will split args to a list and run with shell=False\n If args is a string and use_unsafe_shell=True it run with shell=True.\n Other arguments:\n - check_rc (boolean) Whether to call fail_json in case of\n non zero RC. Default is False.\n - close_fds (boolean) See documentation for subprocess.Popen().\n Default is False.\n - executable (string) See documentation for subprocess.Popen().\n Default is None.\n '''\n\n shell = False\n if isinstance(args, list):\n if use_unsafe_shell:\n args = \" \".join([pipes.quote(x) for x in args])\n shell = True\n elif isinstance(args, basestring) and use_unsafe_shell:\n shell = True\n elif isinstance(args, basestring):\n args = shlex.split(args.encode('utf-8'))\n else:\n msg = \"Argument 'args' to run_command must be list or string\"\n self.fail_json(rc=257, cmd=args, msg=msg)\n\n # expand things like $HOME and ~\n if not shell:\n args = [ os.path.expandvars(os.path.expanduser(x)) for x in args ]\n\n rc = 0\n msg = None\n st_in = None\n\n # Set a temporart env path if a prefix is passed\n env=os.environ\n if path_prefix:\n env['PATH']=\"%s:%s\" % (path_prefix, env['PATH'])\n\n # create a printable version of the command for use\n # in reporting later, which strips out things like\n # passwords from the args list\n if isinstance(args, list):\n clean_args = \" \".join(pipes.quote(arg) for arg in args)\n else:\n clean_args = args\n\n # all clean strings should return two match groups, \n # where the first is the CLI argument and the second \n # is the password/key/phrase that will be hidden\n clean_re_strings = [\n # this removes things like --password, --pass, --pass-wd, etc.\n # optionally followed by an '=' or a space. The password can \n # be quoted or not too, though it does not care about quotes\n # that are not balanced\n # source: http://blog.stevenlevithan.com/archives/match-quoted-string\n r'([-]{0,2}pass[-]?(?:word\|wd)?[=\\s]?)((?:[\"\\'])?(?:[^\\s])(?:\\1)?)',\n # TODO: add more regex checks here\n ]\n for re_str in clean_re_strings:\n r = re.compile(re_str)\n clean_args = r.sub(r'\\1*****', clean_args)\n\n if data:\n st_in = subprocess.PIPE\n\n kwargs = dict(\n executable=executable,\n shell=shell,\n close_fds=close_fds,\n stdin= st_in,\n stdout=subprocess.PIPE,\n stderr=subprocess.PIPE \n )\n\n if path_prefix:\n kwargs['env'] = env\n if cwd and os.path.isdir(cwd):\n kwargs['cwd'] = cwd\n\n # store the pwd\n prev_dir = os.getcwd()\n\n # make sure we're in the right working directory\n if cwd and os.path.isdir(cwd):\n try:\n os.chdir(cwd)\n except (OSError, IOError), e:\n self.fail_json(rc=e.errno, msg=\"Could not open %s , %s\" % (cwd, str(e)))\n\n try:\n cmd = subprocess.Popen(args, kwargs)\n\n if data:\n if not binary_data:\n data += '\\n'\n out, err = cmd.communicate(input=data)\n rc = cmd.returncode\n except (OSError, IOError), e:\n self.fail_json(rc=e.errno, msg=str(e), cmd=clean_args)\n except:\n self.fail_json(rc=257, msg=traceback.format_exc(), cmd=clean_args)\n\n if rc != 0 and check_rc:\n msg = err.rstrip()\n self.fail_json(cmd=clean_args, rc=rc, stdout=out, stderr=err, msg=msg)\n\n # reset the pwd\n os.chdir(prev_dir)\n\n return (rc, out, err)", "metadata": "root.AnsibleModule.run_command", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 1193 } ]	[ { "span": "except:", "start_line": 297, "start_column": 8, "end_line": 297, "end_column": 15 }, { "span": "except:", "start_line": 526, "start_column": 8, "end_line": 526, "end_column": 15 }, { "span": "except:", "start_line": 854, "start_column": 28, "end_line": 854, "end_column": 35 }, { "span": "except:", "start_line": 992, "start_column": 8, "end_line": 992, 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Unused local variable	gallantlab/pycortex/cortex/polyutils.py	[ { "content": " def surface_gradient(self, scalars, at_verts=True):\n \"\"\"Gradient of a function with values `scalars` at each vertex on the surface.\n If `at_verts`, returns values at each vertex. Otherwise, returns values at each\n face.\n\n Parameters\n ----------\n scalars : 1D ndarray, shape (total_verts,)\n A scalar-valued function across the cortex.\n at_verts : bool, optional\n If True (default), values will be returned for each vertex. Otherwise,\n values will be retruned for each face.\n\n Returns\n -------\n gradu : 2D ndarray, shape (total_verts,3) or (total_polys,3)\n Contains the x-, y-, and z-axis gradients of the given `scalars` at either\n each vertex (if `at_verts` is True) or each face.\n \"\"\"\n pu = scalars[self.polys]\n fe12, fe23, fe31 = [f.T for f in self._facenorm_cross_edge]\n pu1, pu2, pu3 = pu.T\n fa = self.face_areas\n\n # numexpr is much faster than doing this using numpy!\n #gradu = ((fe12.T * pu[:,2] +\n # fe23.T * pu[:,0] +\n # fe31.T * pu[:,1]) / (2 * self.face_areas)).T\n gradu = np.nan_to_num(ne.evaluate(\"(fe12 * pu3 + fe23 * pu1 + fe31 * pu2) / (2 * fa)\").T)\n \n if at_verts:\n return (self.connected.dot(gradu).T / self.connected.sum(1).A.squeeze()).T\n return gradu", "metadata": "root.Surface.surface_gradient", "header": "['class', 'Surface', '(', 'object', ')', ':', '___EOS___']", "index": 246 }, { "content": " def geodesic_distance(self, verts, m=1.0, fem=False):\n \"\"\"Minimum mesh geodesic distance (in mm) from each vertex in surface to any\n vertex in the collection `verts`.\n\n Geodesic distance is estimated using heat-based method (see 'Geodesics in Heat',\n Crane et al, 2012). Diffusion of heat along the mesh is simulated and then\n used to infer geodesic distance. The duration of the simulation is controlled\n by the parameter `m`. Larger values of `m` will smooth & regularize the distance\n computation. Smaller values of `m` will roughen and will usually increase error\n in the distance computation. The default value of 1.0 is probably pretty good.\n\n This function caches some data (sparse LU factorizations of the laplace-beltrami\n operator and the weighted adjacency matrix), so it will be much faster on\n subsequent runs.\n\n The time taken by this function is independent of the number of vertices in verts.\n\n Parameters\n ----------\n verts : 1D array-like of ints\n Set of vertices to compute distance from. This function returns the shortest\n distance to any of these vertices from every vertex in the surface.\n m : float, optional\n Reverse Euler step length. The optimal value is likely between 0.5 and 1.5.\n Default is 1.0, which should be fine for most cases.\n fem : bool, optional\n Whether to use Finite Element Method lumped mass matrix. Wasn't used in \n Crane 2012 paper. Doesn't seem to help any.\n\n Returns\n -------\n dist : 1D ndarray, shape (total_verts,)\n Geodesic distance (in mm) from each vertex in the surface to the closest\n vertex in `verts`.\n \"\"\"\n npt = len(self.pts)\n if m not in self._rlfac_solvers or m not in self._nLC_solvers:\n B, D, W, V = self.laplace_operator\n nLC = W - V # negative laplace matrix\n if not fem:\n spD = sparse.dia_matrix((D,[0]), (npt,npt)).tocsr() # lumped mass matrix\n else:\n spD = B\n \n t = m * self.avg_edge_length ** 2 # time of heat evolution\n lfac = spD - t * nLC # backward Euler matrix\n\n # Exclude rows with zero weight (these break the sparse LU, that finicky fuck)\n goodrows = np.nonzero(~np.array(lfac.sum(0) == 0).ravel())[0]\n self._goodrows = goodrows\n self._rlfac_solvers[m] = sparse.linalg.dsolve.factorized(lfac[goodrows][:,goodrows])\n self._nLC_solvers[m] = sparse.linalg.dsolve.factorized(nLC[goodrows][:,goodrows])\n\n # Solve system to get u, the heat values\n u0 = np.zeros((npt,)) # initial heat values\n u0[verts] = 1.0\n goodu = self._rlfac_solvers[m](u0[self._goodrows])\n u = np.zeros((npt,))\n u[self._goodrows] = goodu\n\n # Compute grad u at each face\n gradu = self.surface_gradient(u, at_verts=False)\n \n # Compute X (normalized grad u)\n #X = np.nan_to_num((-gradu.T / np.sqrt((gradu2).sum(1))).T)\n graduT = gradu.T\n gusum = ne.evaluate(\"sum(gradu 2, 1)\")\n X = np.nan_to_num(ne.evaluate(\"-graduT / sqrt(gusum)\").T)\n\n # Compute integrated divergence of X at each vertex\n #x1 = x2 = x3 = np.zeros((X.shape[0],))\n c32, c13, c21 = self._cot_edge\n x1 = 0.5 * (c32 * X).sum(1)\n x2 = 0.5 * (c13 * X).sum(1)\n x3 = 0.5 * (c21 * X).sum(1)\n \n conn1, conn2, conn3 = self._polyconn\n divx = conn1.dot(x1) + conn2.dot(x2) + conn3.dot(x3)\n\n # Compute phi (distance)\n goodphi = self._nLC_solvers[m](divx[self._goodrows])\n phi = np.zeros((npt,))\n phi[self._goodrows] = goodphi - goodphi.min()\n\n # Ensure that distance is zero for selected verts\n phi[verts] = 0.0\n\n return phi", "metadata": "root.Surface.geodesic_distance", "header": "['class', 'Surface', '(', 'object', ')', ':', '___EOS___']", "index": 445 } ]	[ { "span": "fe12,", "start_line": 266, "start_column": 8, "end_line": 266, "end_column": 12 }, { "span": "fe23,", "start_line": 266, "start_column": 14, "end_line": 266, "end_column": 18 }, { "span": "fe31 ", "start_line": 266, "start_column": 20, "end_line": 266, "end_column": 24 }, { "span": "pu1,", "start_line": 267, "start_column": 8, "end_line": 267, "end_column": 11 }, { "span": "pu2,", "start_line": 267, "start_column": 13, "end_line": 267, "end_column": 16 }, { "span": "pu3 ", "start_line": 267, "start_column": 18, "end_line": 267, "end_column": 21 }, { "span": "fa ", "start_line": 268, "start_column": 8, "end_line": 268, "end_column": 10 }, { "span": "graduT ", "start_line": 510, "start_column": 8, "end_line": 510, "end_column": 14 }, { "span": "gusum ", "start_line": 511, "start_column": 8, "end_line": 511, "end_column": 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Variable defined multiple times	slinderman/pyhawkes/experiments/hippocampus.py	[ { "content": "def plot_locations(result, offset=0):\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs, scale=False)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n\n fig = create_figure(figsize=(1.4,2.9))\n ax = create_axis_at_location(fig, .3, 1.7, 1, 1)\n\n # toplot = np.random.choice(np.arange(K), size=4, replace=False)\n toplot = np.linspace(offset,K+offset, 4, endpoint=False).astype(np.int)\n print toplot\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n plot_colors = [wheel_cmap((np.pi+pfs_th[node_perm[j]])/(2np.pi)) for j in toplot]\n\n for i,k in enumerate(node_perm):\n # plt.text(pfs[k,0], pfs[k,1], \"%d\" % i)\n if i not in toplot:\n color = 0.8 np.ones(3)\n\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=1.0)\n\n for i,k in enumerate(node_perm):\n # plt.text(pfs[k,0], pfs[k,1], \"%d\" % i)\n if i in toplot:\n j = np.where(toplot==i)[0][0]\n color = plot_colors[j]\n\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k])\n\n\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"True Place Fields\")\n plt.xlim(-45,45)\n plt.xticks([-40, -20, 0, 20, 40])\n # plt.xlabel(\"$x$\")\n plt.ylim(-45,45)\n plt.yticks([-40, -20, 0, 20, 40])\n # plt.ylabel(\"$y$\")\n\n # Now plot the inferred locations\n # plt.subplot(212, aspect='equal')\n ax = create_axis_at_location(fig, .3, .2, 1, 1)\n for L in Ls_rot[::2]:\n for j in np.random.permutation(len(toplot)):\n k = node_perm[toplot][j]\n color = plot_colors[j]\n plt.plot(L[k,0], L[k,1], 'o',\n markerfacecolor=color, markeredgecolor=\"none\",\n markersize=4, alpha=0.25)\n\n plt.title(\"Locations Samples\")\n # plt.xlim(-30, 30)\n # plt.xticks([])\n # plt.ylim(-30, 30)\n # plt.yticks([])\n plt.xlim(-3, 3)\n plt.xticks([-2, 0, 2])\n plt.ylim(-3, 3)\n plt.yticks([-2, 0, 2])\n\n plt.savefig(os.path.join(results_dir, \"locations_%d.pdf\" % offset))\n # plt.show()", "metadata": "root.plot_locations", "header": "['module', '___EOS___']", "index": 293 }, { "content": "def plot_mean_locations():\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n\n Ls_mean = np.mean(Ls_rot, 0)\n\n fig = create_figure(figsize=(1.4,2.5))\n plt.subplot(211, aspect='equal')\n\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2np.pi))\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"True Place Fields\")\n plt.xlim(-45, 45)\n # plt.xlabel(\"$x$\")\n plt.xticks([-40, -20, 0, 20, 40], [])\n plt.ylim(-45, 45)\n # plt.ylabel(\"$y$\")\n plt.yticks([-40, -20, 0, 20, 40], [])\n\n # Now plot the inferred locations\n\n\n plt.subplot(212, aspect='equal')\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2np.pi))\n plt.plot(Ls_mean[k,0], Ls_mean[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"Mean Locations\")\n plt.xlim(-30, 30)\n plt.xticks([])\n plt.ylim(-30, 30)\n plt.yticks([])\n\n plt.tight_layout()\n plt.savefig(os.path.join(results_dir, \"hipp_mean_locations.pdf\"))\n plt.show()", "metadata": "root.plot_mean_locations", "header": "['module', '___EOS___']", "index": 368 }, { "content": "def plot_mean_locations():\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n\n Ls_mean = np.mean(Ls_rot, 0)\n\n fig = create_figure(figsize=(1.4,2.5))\n plt.subplot(211, aspect='equal')\n\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2np.pi))\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"True Place Fields\")\n plt.xlim(-45, 45)\n # plt.xlabel(\"$x$\")\n plt.xticks([-40, -20, 0, 20, 40], [])\n plt.ylim(-45, 45)\n # plt.ylabel(\"$y$\")\n plt.yticks([-40, -20, 0, 20, 40], [])\n\n # Now plot the inferred locations\n\n\n plt.subplot(212, aspect='equal')\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2np.pi))\n plt.plot(Ls_mean[k,0], Ls_mean[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"Mean Locations\")\n plt.xlim(-30, 30)\n plt.xticks([])\n plt.ylim(-30, 30)\n plt.yticks([])\n\n plt.tight_layout()\n plt.savefig(os.path.join(results_dir, \"hipp_mean_locations.pdf\"))\n plt.show()", "metadata": "root.plot_mean_locations", "header": "['module', '___EOS___']", "index": 492 }, { "content": "def plot_mean_and_pca_locations(result):\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs, scale=False)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n Ls_mean = np.mean(Ls_rot, 0)\n\n # Bin the data\n from pyhawkes.utils.utils import convert_continuous_to_discrete\n S_dt = convert_continuous_to_discrete(S, C, 0.25, 0, T)\n\n # Smooth the data to get a firing rate\n from scipy.ndimage.filters import gaussian_filter1d\n S_smooth = np.array([gaussian_filter1d(s, 4) for s in S_dt.T]).T\n\n # Run pca to gte an embedding\n from sklearn.decomposition import PCA\n pca = PCA(n_components=2)\n pca.fit(S_smooth)\n Z = pca.components_.T\n\n # Rotate\n R = compute_optimal_rotation(Z, pfs, scale=False)\n Z = Z.dot(R)\n\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n fig = create_figure(figsize=(1.4,2.9))\n # plt.subplot(211, aspect='equal')\n ax = create_axis_at_location(fig, .3, 1.7, 1, 1)\n\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2np.pi))\n plt.plot(Ls_mean[k,0], Ls_mean[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"Mean Locations\")\n plt.xlim(-3, 3)\n plt.xticks([-2, 0, 2])\n plt.ylim(-3, 3)\n plt.yticks([-2, 0, 2])\n\n\n # plt.subplot(212, aspect='equal')\n ax = create_axis_at_location(fig, .3, .2, 1, 1)\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2np.pi))\n plt.plot(Z[k,0], Z[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"PCA Locations\")\n plt.xlim(-.5, .5)\n # plt.xlabel(\"$x$\")\n plt.xticks([-.4, 0, .4])\n plt.ylim(-.5, .5)\n # plt.ylabel(\"$y$\")\n plt.yticks([-.4, 0, .4])\n\n # plt.tight_layout()\n plt.savefig(os.path.join(results_dir, \"hipp_mean_pca_locations.pdf\"))\n plt.show()", "metadata": "root.plot_mean_and_pca_locations", "header": "['module', '___EOS___']", "index": 548 } ]	[ { "span": "ax ", "start_line": 303, "start_column": 4, "end_line": 303, "end_column": 6 }, { "span": "plot_mean_locations(", "start_line": 368, "start_column": 4, "end_line": 368, 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Unused import	dcramer/sentry-old/sentry/plugins/sentry_redmine/migrations/0001_initial.py	[ { "content": "# encoding: utf-8\nimport datetime\nfrom south.db import db\nfrom south.v2 import SchemaMigration\nfrom django.db import models\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Migration(SchemaMigration):\n\n\n\n\n\n models = {\n 'sentry.groupedmessage': {\n 'Meta': {'unique_together': \"(('logger', 'view', 'checksum'),)\", 'object_name': 'GroupedMessage'},\n 'checksum': ('django.db.models.fields.CharField', [], {'max_length': '32'}),\n 'class_name': ('django.db.models.fields.CharField', [], {'db_index': 'True', 'max_length': '128', 'null': 'True', 'blank': 'True'}),\n 'data': ('django.db.models.fields.TextField', [], {'null': 'True', 'blank': 'True'}),\n 'first_seen': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now', 'db_index': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'last_seen': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now', 'db_index': 'True'}),\n 'level': ('django.db.models.fields.PositiveIntegerField', [], {'default': '40', 'db_index': 'True', 'blank': 'True'}),\n 'logger': ('django.db.models.fields.CharField', [], {'default': \"'root'\", 'max_length': '64', 'db_index': 'True', 'blank': 'True'}),\n 'message': ('django.db.models.fields.TextField', [], {}),\n 'status': ('django.db.models.fields.PositiveIntegerField', [], {'default': '0', 'db_index': 'True'}),\n 'times_seen': ('django.db.models.fields.PositiveIntegerField', [], {'default': '1'}),\n 'traceback': ('django.db.models.fields.TextField', [], {'null': 'True', 'blank': 'True'}),\n 'view': ('django.db.models.fields.CharField', [], {'max_length': '200', 'null': 'True', 'blank': 'True'})\n },\n 'sentry_redmine.redmineissue': {\n 'Meta': {'object_name': 'RedmineIssue'},\n 'group': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['sentry.GroupedMessage']\"}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'issue_id': ('django.db.models.fields.PositiveIntegerField', [], {})\n }\n }\n\n complete_apps = ['sentry_redmine']", "metadata": "root.Migration", "header": "['module', '___EOS___']", "index": 6 }, { "content": " def forwards(self, orm):\n \n # Adding model 'RedmineIssue'\n db.create_table('sentry_redmine_redmineissue', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('group', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['sentry.GroupedMessage'])),\n ('issue_id', self.gf('django.db.models.fields.PositiveIntegerField')()),\n ))\n db.send_create_signal('sentry_redmine', ['RedmineIssue'])", "metadata": "root.Migration.forwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 8 }, { "content": " def backwards(self, orm):\n \n # Deleting model 'RedmineIssue'\n db.delete_table('sentry_redmine_redmineissue')", "metadata": "root.Migration.backwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 19 } ]	[ { "span": "import datetime", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 15 }, { "span": "from django.db import models", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 28 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "encoding", ":", " ", "utf", "-", "8_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "datetime_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "south_", "._", "db_", "import_", "db_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "south_", "._", "v2_", "import_", "Schema", "Migration_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "django_", "._", "db_", "import_", "models_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", 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Except block handles 'BaseException'	enthought/traits/traits/tests/test_cythonized_traits.py	[ { "content": "def has_no_compiler():\n if no_cython:\n return True\n # Easy way to check if we have access to a compiler\n code = \"return 1+1\"\n try:\n cython.inline(code)\n return False\n except:\n return True", "metadata": "root.has_no_compiler", "header": "['module', '___EOS___']", "index": 22 }, { "content": " @unittest.skipIf(SKIP_TEST, 'Missing Cython and/or compiler')\n def test_on_trait_lambda_failure(self):\n\n # Lambda function are converted like builtins when cythonized which\n # causes the following code to fail\n\n code = \"\"\"\nfrom traits.api import HasTraits, Str, Int, Property\n\ndef Alias(name):\n return Property(\n lambda obj: getattr(obj, name),\n lambda obj, value: setattr(obj, name, value)\n )\n\nclass Test(HasTraits):\n name = Str\n\n funky_name = Alias('name')\n\nreturn Test()\n\"\"\"\n\n try:\n cython.inline(code, get_type=_always_object_type, force=True,\n locals={}, globals={})\n except:\n # We suppose we have an exception. Because of the usage of the\n # skipIf decorator on the test, we can't use an expectedFailure\n # decorator as they don't play well together.\n pass\n else:\n self.fail(\n 'Unexpected results. Cython was not managing lambda as regular'\n ' functions. Behaviour changed ...'\n )", "metadata": "root.CythonizedTraitsTestCase.test_on_trait_lambda_failure", "header": "['class', 'CythonizedTraitsTestCase', '(', 'unittest', '.', 'TestCase', ',', 'UnittestTools', ')', ':', '___EOS___']", "index": 247 } ]	[ { "span": "except:", "start_line": 30, "start_column": 4, "end_line": 30, "end_column": 11 }, { "span": "except:", "start_line": 273, "start_column": 8, "end_line": 273, "end_column": 15 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "has", "\\u", "no", "\\u", "compiler_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "if_", "no", "\\u", "cython", "_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "return_", "True_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "Eas", "y", " ", "way", " ", "to", " ", "check", " ", "if", " ", "we", " ", "have", " ", 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Unused local variable	karesansui/karesansui/bin/delete_export_data.py	[ { "content": " def process(self):\n (opts, args) = getopts()\n chkopts(opts)\n self.up_progress(10)\n\n kvc = KaresansuiVirtConnection()\n # #1 libvirt process\n try:\n #inactive_pool = kvc.list_inactive_storage_pool()\n inactive_pool = []\n active_pool = kvc.list_active_storage_pool()\n pools = inactive_pool + active_pool\n pools.sort()\n\n export = []\n for pool_name in pools:\n pool = kvc.search_kvn_storage_pools(pool_name)\n path = pool[0].get_info()[\"target\"][\"path\"]\n if os.path.exists(path):\n for _afile in glob.glob(\"%s//info.dat\" % (path,)):\n e_param = ExportConfigParam()\n e_param.load_xml_config(_afile)\n\n if e_param.get_uuid() != opts.uuid:\n continue\n\n e_name = e_param.get_domain()\n _dir = os.path.dirname(_afile)\n\n param = ConfigParam(e_name)\n\n path = \"%s/%s.xml\" % (_dir, e_name)\n if os.path.isfile(path) is False:\n raise KssCommandException(\n 'Export corrupt data.(file not found) - path=%s' % path)\n\n param.load_xml_config(path)\n\n if e_name != param.get_domain_name():\n raise KssCommandException(\n 'Export corrupt data.(The name does not match) - info=%s, xml=%s' \\\n % (e_name, param.get_name()))\n\n _dir = os.path.dirname(_afile)\n\n export.append({\"dir\" : _dir,\n \"pool\" : pool_name,\n \"uuid\" : e_param.get_uuid(),\n \"name\" : e_name,\n })\n\n if len(export) < 1:\n # refresh pool.\n conn = KaresansuiVirtConnection(readonly=False)\n try:\n conn.refresh_pools()\n finally:\n conn.close()\n raise KssCommandException('libvirt data did not exist. - uuid=%s' % opts.uuid)\n else:\n export = export[0]\n\n finally:\n kvc.close()\n\n self.up_progress(30)\n # #2 physical process\n if os.path.isdir(export['dir']) is False:\n raise KssCommandException(_(\"Failed to delete export data. - %s\") % (_(\"Export data directory not found. [%s]\") % (export['dir'])))\n\n uuid = os.path.basename(export['dir'])\n pool_dir = os.path.dirname(export['dir'])\n\n if not is_uuid(export['uuid']):\n raise KssCommandException(_(\"Failed to delete export data. - %s\") % (_(\"'%s' is not valid export data directory.\") % (export['dir'])))\n\n shutil.rmtree(export['dir'])\n\n for _afile in glob.glob(\"%simg\" % (export['dir'])):\n os.remove(_afile)\n\n self.up_progress(30)\n # refresh pool.\n conn = KaresansuiVirtConnection(readonly=False)\n try:\n try:\n conn.refresh_pools()\n finally:\n conn.close()\n except:\n pass\n\n self.logger.info('Deleted export data. - uuid=%s' % (opts.uuid))\n print >>sys.stdout, _('Deleted export data. - uuid=%s') % (opts.uuid)\n return True", "metadata": "root.DeleteExportData.process", "header": "['class', 'DeleteExportData', '(', 'KssCommand', ')', ':', '___EOS___']", "index": 69 } ]	[ { "span": "uuid ", "start_line": 139, "start_column": 8, "end_line": 139, "end_column": 12 }, { "span": "pool_dir ", 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Insecure temporary file	babble/babble/include/jython/Lib/test/test_logging.py	[ { "content": "def test4():\n for i in range(4):\n conf = globals()['config%d' % i]\n sys.stdout.write('config%d: ' % i)\n loggerDict = logging.getLogger().manager.loggerDict\n logging._acquireLock()\n try:\n saved_handlers = logging._handlers.copy()\n saved_handler_list = logging._handlerList[:]\n saved_loggers = loggerDict.copy()\n finally:\n logging._releaseLock()\n try:\n fn = tempfile.mktemp(\".ini\")\n f = open(fn, \"w\")\n f.write(conf)\n f.close()\n try:\n logging.config.fileConfig(fn)\n #call again to make sure cleanup is correct\n logging.config.fileConfig(fn)\n except:\n t = sys.exc_info()[0]\n message(str(t))\n else:\n message('ok.')\n os.remove(fn)\n finally:\n logging._acquireLock()\n try:\n logging._handlers.clear()\n logging._handlers.update(saved_handlers)\n logging._handlerList[:] = saved_handler_list\n loggerDict = logging.getLogger().manager.loggerDict\n loggerDict.clear()\n loggerDict.update(saved_loggers)\n finally:\n logging._releaseLock()", "metadata": "root.test4", "header": "['module', '___EOS___']", "index": 471 }, { "content": "def test5():\n loggerDict = logging.getLogger().manager.loggerDict\n logging._acquireLock()\n try:\n saved_handlers = logging._handlers.copy()\n saved_handler_list = logging._handlerList[:]\n saved_loggers = loggerDict.copy()\n finally:\n logging._releaseLock()\n try:\n fn = tempfile.mktemp(\".ini\")\n f = open(fn, \"w\")\n f.write(test5_config)\n f.close()\n logging.config.fileConfig(fn)\n try:\n raise KeyError\n except KeyError:\n logging.exception(\"just testing\")\n os.remove(fn)\n hdlr = logging.getLogger().handlers[0]\n logging.getLogger().handlers.remove(hdlr)\n finally:\n logging._acquireLock()\n try:\n logging._handlers.clear()\n logging._handlers.update(saved_handlers)\n logging._handlerList[:] = saved_handler_list\n loggerDict = logging.getLogger().manager.loggerDict\n loggerDict.clear()\n loggerDict.update(saved_loggers)\n finally:\n logging._releaseLock()", "metadata": "root.test5", "header": "['module', '___EOS___']", "index": 545 } ]	[ { "span": "tempfile.mktemp(\".ini\")", "start_line": 484, "start_column": 17, "end_line": 484, "end_column": 40 }, { "span": "tempfile.mktemp(\".ini\")", "start_line": 555, "start_column": 13, "end_line": 555, "end_column": 36 } ]	[]	1	true	[ "[CLS]_", "Inse", "cure", "_", "temporar", "y_", "file_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "test", "4_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "for_", "i_", "in_", "range_", "(_", "4_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "conf_", "=_", "globals_", "(_", ")_", "[_", "'", "config", "%", "d", "'_", "%_", "i_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "sys_", "._", "stdout_", "._", "write_", "(_", "'", "config", "%", "d", ":", " ", "'_", "%_", "i_", ")_", 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First argument to super() is not enclosing class	python-visualization/folium/folium/plugins/heat_map.py	[ { "content": " def __init__(self, data, name=None, min_opacity=0.5, max_zoom=18,\n max_val=1.0, radius=25, blur=15, gradient=None, overlay=True):\n \"\"\"Create a Heatmap layer\n\n Parameters\n ----------\n data : list of points of the form [lat, lng] or [lat, lng, weight]\n The points you want to plot.\n You can also provide a numpy.array of shape (n,2) or (n,3).\n name : str\n The name of the layer that will be created.\n min_opacity : default 1.\n The minimum opacity the heat will start at.\n max_zoom : default 18\n Zoom level where the points reach maximum intensity (as intensity\n scales with zoom), equals maxZoom of the map by default\n max_val : float, default 1.\n Maximum point intensity\n radius : int, default 25\n Radius of each \"point\" of the heatmap\n blur : int, default 15\n Amount of blur\n gradient : dict, default None\n Color gradient config. e.g. {0.4: 'blue', 0.65: 'lime', 1: 'red'}\n \"\"\"\n super(TileLayer, self).__init__(name=name)\n self._name = 'HeatMap'\n self.tile_name = name if name is not None else self.get_name()\n\n self.data = [[x for x in line] for line in data]\n self.min_opacity = min_opacity\n self.max_zoom = max_zoom\n self.max_val = max_val\n self.radius = radius\n self.blur = blur\n self.gradient = (json.dumps(gradient, sort_keys=True) if\n gradient is not None else \"null\")\n self.overlay = overlay\n\n self._template = Template(u\"\"\"\n {% macro script(this, kwargs) %}\n var {{this.get_name()}} = L.heatLayer(\n {{this.data}},\n {\n minOpacity: {{this.min_opacity}},\n maxZoom: {{this.max_zoom}},\n max: {{this.max_val}},\n radius: {{this.radius}},\n blur: {{this.blur}},\n gradient: {{this.gradient}}\n })\n .addTo({{this._parent.get_name()}});\n {% endmacro %}\n \"\"\")", "metadata": "root.HeatMap.__init__", "header": "['class', 'HeatMap', '(', 'TileLayer', ')', ':', '___EOS___']", "index": 18 }, { "content": " def render(self, **kwargs):\n super(TileLayer, self).render()\n\n figure = self.get_root()\n assert isinstance(figure, Figure), (\"You cannot render this Element \"\n \"if it's not in a Figure.\")\n\n figure.header.add_children(\n JavascriptLink(\"https://leaflet.github.io/Leaflet.heat/dist/leaflet-heat.js\"), # noqa\n name='leaflet-heat.js')", "metadata": "root.HeatMap.render", "header": "['class', 'HeatMap', '(', 'TileLayer', ')', ':', '___EOS___']", "index": 73 } ]	[ { "span": "super(TileLayer, self).", "start_line": 43, "start_column": 8, "end_line": 43, "end_column": 30 }, { "span": "super(TileLayer, self).", "start_line": 74, "start_column": 8, "end_line": 74, "end_column": 30 } ]	[]	1	true	[ "[CLS]_", "First_", "argument_", "to_", "super_", "(_", ")_", "is_", "not_", "encl", "osin", "g_", "class_", "[SEP]_", "class_", "Heat", "Map_", "(_", "Til", "e", "Layer_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "def_", "\\u\\u", 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"\\u\\u\\uNL\\u\\u\\u_", "Javascript", "Link_", "(_", "\"", "https", "://", "leaf", "let", ".", "git", "hub", ".", "io", "/", "Lea", "fle", "t", ".", "heat", "/", "dist", "/", "leaf", "let", "-", "heat", ".", "js", "\"_", ")_", ",_", "#", " ", "no", "qa_", "\\u\\u\\uNL\\u\\u\\u_", "name_", "=_", "'", "leaf", "let", "-", "heat", ".", "js", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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Except block handles 'BaseException'	dtmilano/AndroidViewClient/tests/com/dtmilano/android/uiautomator/uiautomatorhelpertests.py	[ { "content": "#! /usr/bin/env python\nfrom PIL import Image\nimport random\nimport sys\nimport os\nimport time\nimport cStringIO\n\ntry:\n sys.path.insert(0, os.path.join(os.environ['ANDROID_VIEW_CLIENT_HOME'], 'src'))\nexcept:\n pass\n\n\nfrom com.dtmilano.android.viewclient import ViewClient\nfrom com.dtmilano.android.uiautomator.uiautomatorhelper import UiAutomatorHelper\n\n__author__ = 'diego'\n\nimport unittest\n\n\nDEBUG = False\n\n\n\n\nif __name__ == '__main__':\n unittest.main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "except:", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 7 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#!", " ", "/", "usr", "/", "bin", "/", "env", " ", "python_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "PIL_", "import_", "Image_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "random_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "sys_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "os_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "time_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "c", "String", "IO_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "sys_", "._", "path_", "._", "insert_", "(_", "0_", ",_", "os_", "._", "path_", "._", "join_", "(_", "os_", "._", "environ_", "[_", "'", "ANDROID", "\\u", "VIEW", "\\u", "CLIENT", "\\u", "HOM", "E", "'_", "]_", ",_", "'", "src", "'_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "from_", "com_", "._", "dtm", "ila", "no_", "._", "android", "_", "._", "view", "client_", "import_", "View", "Client_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "com_", "._", "dtm", "ila", "no_", "._", "android", "_", "._", "ui", "automato", "r_", "._", "ui", "automato", "rhe", "lp", "er_", "import_", "Ui", "Automat", "or", "Helper_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u", "author\\u\\u_", "=_", "'", "die", "go", "'_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "unittest_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "DEBUG_", "=_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "\\u\\u", "name\\u\\u_", "==_", "'\\u", "\\u", "main", "\\u\\u'_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "unittest_", "._", "main_", "(_", ")_", "\\u\\u\\uDEDENT\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Except block handles 'BaseException'	dimagi/commcare-hq/corehq/apps/style/forms/widgets.py	[ { "content": " def render(self, name, value, attrs=None):\n final_attrs = self.build_attrs(attrs, type='checkbox', name=name)\n try:\n result = self.check_test(value)\n except: # Silently catch exceptions\n result = False\n if result:\n final_attrs['checked'] = 'checked'\n if value not in ('', True, False, None):\n # Only add the 'value' attribute if a value is non-empty.\n final_attrs['value'] = force_unicode(value)\n return mark_safe(u'<label class=\"checkbox\"><input%s /> %s</label>' %\n (flatatt(final_attrs), self.inline_label))", "metadata": "root.BootstrapCheckboxInput.render", "header": "['class', 'BootstrapCheckboxInput', '(', 'CheckboxInput', ')', ':', '___EOS___']", "index": 18 } ]	[ { "span": "except: ", "start_line": 22, "start_column": 8, "end_line": 22, "end_column": 15 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "class_", "Boots", "trap", "Checkb", "ox", "Input_", "(_", "Checkb", "ox", "Input_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "render_", "(_", "self_", ",_", "name_", ",_", "value_", ",_", "attrs_", "=_", "None_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "final", "\\u", "attrs_", "=_", "self_", "._", "build", "\\u", "attrs_", "(_", "attrs_", ",_", "type_", "=_", "'", "checkb", "ox", "'_", ",_", "name_", "=_", "name_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "result_", "=_", "self_", "._", "check", "\\u", "test_", "(_", "value_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", ":_", "#", " ", "Sile", "ntl", "y", " ", "catch", " ", "exceptions_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "result_", "=_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "result_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "final", "\\u", "attrs_", "[_", "'", "checke", "d", "'_", "]_", "=_", "'", "checke", "d", "'_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "value_", "not_", "in_", "(_", "''_", ",_", "True_", ",_", "False_", ",_", "None_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "On", "ly", " ", "add", " ", "the", " ", "'", "value", "'", " ", "attribute", " ", "if", " ", "a", " ", "value", " ", "is", " ", "non", "-", "empty", "._", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "final", "\\u", "attrs_", "[_", "'", "value", "'_", "]_", "=_", "force", "\\u", "unicode_", "(_", "value_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "mark", "\\u", "safe_", "(_", "u", "'<", "label", " ", "class", "=\"", "checkb", "ox", "\">", "<", "input", "%", "s", " ", "/>", " ", "%", "s", "</", "label", ">'_", "%_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "flat", "att_", "(_", "final", "\\u", "attrs_", ")_", ",_", "self_", "._", "inline", "\\u", "label_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused import	rwl/muntjac/muntjac/demo/sampler/features/dragndrop/__init__.py	[ { "content": "\nfrom muntjac.demo.sampler.features.dragndrop.DragDropTreeSorting import DragDropTreeSorting\nfrom muntjac.demo.sampler.features.dragndrop.DragDropHtml5FromDesktop import DragDropHtml5FromDesktop\nfrom muntjac.demo.sampler.features.dragndrop.DragDropTableTree import DragDropTableTree\nfrom muntjac.demo.sampler.features.dragndrop.DragDropServerValidation import DragDropServerValidation\nfrom muntjac.demo.sampler.features.dragndrop.DragDropRearrangeComponents import DragDropRearrangeComponents\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropTreeSorting import DragDropTreeSorting", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 91 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropHtml5FromDesktop import DragDropHtml5FromDesktop", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 101 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropTableTree import DragDropTableTree", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 87 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropServerValidation import DragDropServerValidation", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 101 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropRearrangeComponents import DragDropRearrangeComponents", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 107 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "mun", "tj", "ac_", "._", "demo_", "._", "sampler_", "._", "features_", "._", "drag", "ndr", "op_", "._", "Drag", "Drop", "Tree", "Sort", "ing_", "import_", "Drag", "Drop", "Tree", "Sort", "ing_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "mun", "tj", "ac_", "._", "demo_", "._", "sampler_", "._", "features_", "._", "drag", "ndr", "op_", "._", "Drag", "Drop", "Ht", "ml", "5", "Fro", "m", "Des", "kto", "p_", "import_", "Drag", "Drop", "Ht", "ml", "5", "Fro", "m", "Des", "kto", "p_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "mun", "tj", "ac_", "._", "demo_", "._", "sampler_", "._", "features_", "._", "drag", "ndr", "op_", "._", "Drag", "Drop", "Table", "Tree_", "import_", "Drag", "Drop", "Table", "Tree_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "mun", "tj", "ac_", "._", "demo_", "._", "sampler_", "._", "features_", "._", "drag", "ndr", "op_", "._", "Drag", "Drop", "Server", "Validation_", "import_", "Drag", "Drop", "Server", "Validation_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "mun", "tj", "ac_", "._", "demo_", "._", "sampler_", "._", "features_", "._", "drag", "ndr", "op_", "._", "Drag", "Drop", "Rea", "rra", "nge", "Components_", "import_", "Drag", "Drop", "Rea", "rra", "nge", "Components_" ]	[ 4, 4, 4, 4, 4, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 ]
Unused import	amrdraz/kodr/app/brython/www/src/Lib/test/test_xmlrpc_net.py	[ { "content": "#!/usr/bin/env python3\n\nimport collections.abc\nimport errno\nimport socket\nimport sys\nimport unittest\nfrom test import support\n\nimport xmlrpc.client as xmlrpclib\n\n\n\n\nif __name__ == \"__main__\":\n test_main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class CurrentTimeTest(unittest.TestCase):\n\n", "metadata": "root.CurrentTimeTest", "header": "['module', '___EOS___']", "index": 11 }, { "content": " def test_current_time(self):\n # Get the current time from xmlrpc.com. This code exercises\n # the minimal HTTP functionality in xmlrpclib.\n self.skipTest(\"time.xmlrpc.com is unreliable\")\n server = xmlrpclib.ServerProxy(\"http://time.xmlrpc.com/RPC2\")\n try:\n t0 = server.currentTime.getCurrentTime()\n except socket.error as e:\n self.skipTest(\"network error: %s\" % e)\n return\n\n # Perform a minimal sanity check on the result, just to be sure\n # the request means what we think it means.\n t1 = xmlrpclib.DateTime()\n\n dt0 = xmlrpclib._datetime_type(t0.value)\n dt1 = xmlrpclib._datetime_type(t1.value)\n if dt0 > dt1:\n delta = dt0 - dt1\n else:\n delta = dt1 - dt0\n # The difference between the system time here and the system\n # time on the server should not be too big.\n self.assertTrue(delta.days <= 1)", "metadata": "root.CurrentTimeTest.test_current_time", "header": "['class', 'CurrentTimeTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 13 }, { "content": " def test_python_builders(self):\n # Get the list of builders from the XMLRPC buildbot interface at\n # python.org.\n server = xmlrpclib.ServerProxy(\"http://buildbot.python.org/all/xmlrpc/\")\n try:\n builders = server.getAllBuilders()\n except socket.error as e:\n self.skipTest(\"network error: %s\" % e)\n return\n self.addCleanup(lambda: server('close')())\n\n # Perform a minimal sanity check on the result, just to be sure\n # the request means what we think it means.\n self.assertIsInstance(builders, collections.abc.Sequence)\n self.assertTrue([x for x in builders if \"3.x\" in x], builders)", "metadata": "root.CurrentTimeTest.test_python_builders", "header": "['class', 'CurrentTimeTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 38 }, { "content": "def test_main():\n support.requires(\"network\")\n support.run_unittest(CurrentTimeTest)", "metadata": "root.test_main", "header": "['module', '___EOS___']", "index": 55 } ]	[ { "span": "import errno", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 12 }, { "span": "import sys", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 10 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#!", "/", "usr", "/", "bin", "/", "env", " ", "python", "3_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "collections_", "._", "abc_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "errno_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "socket_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "sys_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "unittest_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "test_", "import_", "support_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "xmlrpc", "_", "._", "client_", "as_", "xmlrpclib_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "\\u\\u", "name\\u\\u_", "==_", "\"\\u\\u", "main", "\\u\\u\"_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "test\\u", "main_", "(_", ")_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "class_", "Curr", "ent", "Time", "Test_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "[SEP]_", "class_", "Curr", "ent", "Time", "Test_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "def_", "test\\u", "current", "\\u", "time_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "Get", " ", "the", " ", "current", " ", "time", " ", "from", " ", "xmlrpc", ".", "com", ".", " ", " ", "Thi", "s", " ", "code", " ", "exercise", "s_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "the", " ", "minima", "l", " ", "HTTP", " ", "functional", "it", 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Unused local variable	hyperopt/hyperopt/hyperopt/pyll/base.py	[ { "content": " @property\n def arg(self):\n # XXX: move this introspection to __init__, and change\n # the basic data-structure to not use pos_args and named_args.\n # XXX: think though... we want the binding to be updated if pos_args\n # and named_args is modified... so maybe this is an ok way to do it?\n #\n # XXX: extend something to deal with Lambda objects instead of\n # decorated python functions.\n #\n # http://docs.python.org/reference/expressions.html#calls\n #\n binding = {}\n\n fn = scope._impls[self.name]\n # XXX does not work for builtin functions\n defaults = fn.__defaults__ # right-aligned default values for params\n code = fn.__code__\n\n extra_args_ok = bool(code.co_flags & 0x04)\n extra_kwargs_ok = bool(code.co_flags & 0x08)\n\n # -- assert that my understanding of calling protocol is correct\n try:\n if extra_args_ok and extra_kwargs_ok:\n assert len(code.co_varnames) >= code.co_argcount + 2\n param_names = code.co_varnames[:code.co_argcount + 2]\n args_param = param_names[code.co_argcount]\n kwargs_param = param_names[code.co_argcount + 1]\n pos_params = param_names[:code.co_argcount]\n elif extra_kwargs_ok:\n assert len(code.co_varnames) >= code.co_argcount + 1\n param_names = code.co_varnames[:code.co_argcount + 1]\n kwargs_param = param_names[code.co_argcount]\n pos_params = param_names[:code.co_argcount]\n elif extra_args_ok:\n assert len(code.co_varnames) >= code.co_argcount + 1\n param_names = code.co_varnames[:code.co_argcount + 1]\n args_param = param_names[code.co_argcount]\n pos_params = param_names[:code.co_argcount]\n else:\n assert len(code.co_varnames) >= code.co_argcount\n param_names = code.co_varnames[:code.co_argcount]\n pos_params = param_names[:code.co_argcount]\n except AssertionError:\n print 'YIKES: MISUNDERSTANDING OF CALL PROTOCOL:',\n print code.co_argcount,\n print code.co_varnames,\n print '%x' % code.co_flags\n raise\n\n if extra_args_ok:\n binding[args_param] == []\n\n if extra_kwargs_ok:\n binding[kwargs_param] == {}\n\n if len(self.pos_args) > code.co_argcount and not extra_args_ok:\n raise TypeError('Argument count exceeds number of positional params')\n\n # -- bind positional arguments\n for param_i, arg_i in zip(param_names, self.pos_args):\n binding[param_i] = arg_i\n\n if extra_args_ok:\n # XXX: THIS IS NOT BEING TESTED AND IS OBVIOUSLY BROKEN\n binding[args_param].extend(args[code.co_argcount:])\n\n # -- bind keyword arguments\n for aname, aval in self.named_args:\n try:\n pos = pos_params.index(aname)\n except ValueError:\n if extra_kwargs_ok:\n binding[kwargs_param][aname] = aval\n continue\n else:\n raise TypeError('Unrecognized keyword argument', aname)\n param = param_names[pos]\n if param in binding:\n raise TypeError('Duplicate argument for parameter', param)\n binding[param] = aval\n\n assert len(binding) <= len(param_names)\n\n if len(binding) < len(param_names):\n for p in param_names:\n if p not in 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Imprecise assert	goshippo/shippo-python-client/shippo/test/test_rate.py	[ { "content": " def test_list_all(self):\n rate_list = shippo.Rate.all()\n self.assertTrue('count' in rate_list)\n self.assertTrue('results' in rate_list)", "metadata": "root.RateTests.test_list_all", "header": "['class', 'RateTests', '(', 'ShippoTestCase', ')', ':', '___EOS___']", "index": 45 } ]	[ { "span": "self.assertTrue('count' in rate_list)", "start_line": 47, "start_column": 8, "end_line": 47, "end_column": 45 }, { "span": "self.assertTrue('results' in rate_list)", "start_line": 48, "start_column": 8, "end_line": 48, "end_column": 47 } ]	[]	1	true	[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Rat", "e", "Tests_", "(_", "Ship", "po", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "list", "\\u", "all_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "rate", "\\u", "list_", "=_", "ship", "po_", "._", "Rate_", "._", "all_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "count", "'_", "in_", "rate", "\\u", "list_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "results", "'_", "in_", "rate", "\\u", "list_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2 ]
Unused import	aliles/begins/tests/test_formatters.py	[ { "content": "from __future__ import absolute_import, division, print_function\nimport argparse\nimport mock\nimport sys\n\ntry:\n import unittest2 as unittest\nexcept ImportError:\n import unittest\n\nfrom begin import formatters\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class TestCompose(unittest.TestCase):\n\n\n\n\n\n\n\n\n", "metadata": "root.TestCompose", "header": "['module', '___EOS___']", "index": 13 }, { "content": " def make_parser(self, formatter_class):\n parser = argparse.ArgumentParser(description='A test parser',\n formatter_class=formatter_class)\n parser.add_argument('test', help='Test argument')\n subparsers = parser.add_subparsers(title='Available subcommands')\n subparser = subparsers.add_parser('command', help='Test Subcommand',\n formatter_class=formatter_class)\n subparser.add_argument('test', help='Test argument')\n return parser", "metadata": "root.TestCompose.make_parser", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 15 }, { "content": " def test_zero_mixins(self):\n formatter_class = formatters.compose()", "metadata": "root.TestCompose.test_zero_mixins", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 25 }, { "content": " def test_all_mixins(self):\n formatter_class = formatters.compose(\n formatters.RawArguments,\n formatters.RawDescription,\n formatters.ArgumentDefaults,\n formatters.RemoveSubcommandsLine)", "metadata": "root.TestCompose.test_all_mixins", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 28 }, { "content": " def test_with_name(self):\n name = '__HelpFormatterForTesting'\n formatter_class = formatters.compose(formatters.RawDescription,\n name=name)\n self.assertEqual(formatter_class.__name__, name)", "metadata": "root.TestCompose.test_with_name", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 35 }, { "content": " def test_invalid_keyword(self):\n with self.assertRaises(TypeError):\n formatters.compose(invalid=None)", "metadata": "root.TestCompose.test_invalid_keyword", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 41 }, { "content": " def test_raw_argument(self):\n formatter_class = formatters.compose(formatters.RawArguments)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_raw_argument", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 45 }, { "content": " def test_raw_description(self):\n formatter_class = formatters.compose(formatters.RawDescription)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_raw_description", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 50 }, { "content": " def test_argument_defaults(self):\n formatter_class = formatters.compose(formatters.ArgumentDefaults)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_argument_defaults", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 55 }, { "content": " def test_remove_subcommands_line(self):\n formatter_class = formatters.compose(formatters.RemoveSubcommandsLine)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_remove_subcommands_line", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 60 } ]	[ { "span": "import mock", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 11 }, { "span": "import sys", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 10 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "\\u\\u", "future\\u\\u_", "import_", "abs", "olute", "\\u", "import_", ",_", "division_", ",_", "print", "\\u", "function_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "argparse_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "mock_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "sys_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "import_", "unittest2_", "as_", "unittest_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "Import", "Error_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "import_", "unittest_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "from_", "begin_", "import_", "formatters_", "\\u\\u\\uNEWLINE\\u\\u\\u_", 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Imprecise assert	bokeh/bokeh/bokeh/tests/test_themes.py	[ { "content": " def test_construct_no_json_or_filename(self):\n with self.assertRaises(ValueError) as manager:\n Theme()\n self.assertTrue(\"requires json or a filename\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_no_json_or_filename", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 34 }, { "content": " def test_construct_json_and_filename(self):\n with self.assertRaises(ValueError) as manager:\n # we check \"\" and {} as falsey values, to try to trick\n # our code into thinking they weren't provided.\n Theme(filename=\"\", json={})\n self.assertTrue(\"not both\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_json_and_filename", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 39 }, { "content": " def test_construct_bad_attrs(self):\n with self.assertRaises(ValueError) as manager:\n Theme(json=dict(attrs=42))\n self.assertTrue(\"should be a dictionary of class names\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_bad_attrs", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 46 }, { "content": " def test_construct_bad_class_props(self):\n with self.assertRaises(ValueError) as manager:\n Theme(json=dict(attrs=dict(SomeClass=42)))\n self.assertTrue(\"should be a dictionary of properties\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_bad_class_props", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 51 } ]	[ { "span": "self.assertTrue(\"requires json or a filename\" in repr(manager.exception))", "start_line": 37, "start_column": 8, "end_line": 37, "end_column": 81 }, { "span": "self.assertTrue(\"not both\" in repr(manager.exception))", "start_line": 44, "start_column": 8, "end_line": 44, "end_column": 62 }, { "span": "self.assertTrue(\"should be a dictionary of class names\" in repr(manager.exception))", "start_line": 49, "start_column": 8, "end_line": 49, "end_column": 91 }, { "span": "self.assertTrue(\"should be a dictionary of properties\" in repr(manager.exception))", "start_line": 54, "start_column": 8, "end_line": 54, "end_column": 90 } ]	[]	1	true	[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Test", "Them", "es_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "construct", "\\u", "no", "\\u", "json", "\\u", "or", "\\u", "filename_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "with_", "self_", "._", "assert", "Raises_", "(_", "Value", "Error_", ")_", "as_", "manager_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "Theme_", "(_", 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Unused import	comodit/demos/openshift/helper.py	[ { "content": "import time, sys, os, config, string, random\n\nfrom comodit_client.api.exceptions import PythonApiException\nfrom comodit_client.rest.exceptions import ApiException\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def create_host(env, name, platform, distribution, applications = []):\n host = env.hosts().create(name, \"\", platform['name'], distribution['name'])\n\n # Configure platform\n context = host.get_platform()\n for key, value in platform['settings'].iteritems():\n context.settings().create(key, value)\n\n # Configure distribution\n context = host.get_distribution()\n for key, value in distribution['settings'].iteritems():\n context.settings().create(key, value)\n\n # Install applications\n for app in applications:\n host.install(app['name'], app['settings'])\n\n return host", "metadata": "root.create_host", "header": "['module', '___EOS___']", "index": 5 }, { "content": "def get_short_hostname(hostname):\n parts = hostname.split('.')\n return parts[0]", "metadata": "root.get_short_hostname", "header": "['module', '___EOS___']", "index": 24 }, { "content": "def get_latest_id(prefix, env):\n names = env.hosts_f\n last_id = -1\n for name in names:\n if name.startswith(prefix):\n i = int(name[len(prefix):].rstrip())\n if i > last_id:\n last_id = i\n return last_id", "metadata": "root.get_latest_id", "header": "['module', '___EOS___']", "index": 28 }, { "content": "def generate_id(size=6, chars=string.ascii_uppercase + string.digits):\n return ''.join(random.choice(chars) for x in range(size))", "metadata": "root.generate_id", "header": "['module', '___EOS___']", "index": 38 }, { "content": "def track_changes(host):\n changes = host.changes().list()\n c = changes[-1]\n current_task = -1\n done = False\n while not done:\n for t in c.tasks:\n # Skip already processed tasks\n if t.order_num < current_task:\n continue\n\n # If the current task\n if t.order_num == current_task:\n if t.status == \"OK\":\n print \" [OK]\"\n if current_task == len(c.tasks) -1:\n done = True\n continue\n elif t.status == \"ERROR\":\n print \" [ERROR](%s...)\" % t.error[:80]\n if current_task == len(c.tasks) -1:\n done = True\n continue\n if t.status == \"PENDING\":\n break\n \n # Moved to a new task\n current_task = t.order_num\n sys.stdout.write(\" - %s...\" % t.description)\n sys.stdout.flush()\n break\n\n # Otherwise we wait, refresh, and loop\n time.sleep(1)\n c.refresh()", "metadata": "root.track_changes", "header": "['module', '___EOS___']", "index": 41 } ]	[ { "span": "import time, sys, os, config, string, random", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 44 }, { "span": "from comodit_client.api.exceptions import PythonApiException", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 60 }, { "span": "from comodit_client.rest.exceptions import ApiException", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 55 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "time_", ",_", "sys_", ",_", "os_", ",_", "config_", ",_", "string_", ",_", "random_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "com", "odi", "t", "\\u", "client_", "._", "api_", "._", "exceptions_", "import_", "Pyth", "on", "Ap", "i", "Exception_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "com", "odi", "t", "\\u", "client_", "._", "rest_", "._", "exceptions_", "import_", "Ap", "i", "Exception_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "create", "\\u", "host_", "(_", 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"._", "stdout_", "._", "write_", "(_", "\"", " ", " ", "-", " ", "%", "s", "...\"_", "%_", "t_", "._", "description_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "sys_", "._", "stdout_", "._", "flush_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "break_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "Ot", "her", "wis", "e", " ", "we", " ", "wait", ",", " ", "refre", "sh", ",", " ", "and", " ", "loop_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "time_", "._", "sleep_", "(_", "1_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "c_", "._", "refresh_", "(_", ")_" ]	[ 4, 4, 4, 4, 4, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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Imprecise assert	ASPP/pelita/test/test_game_master.py	[ { "content": " def test_win_on_timeout_team_0(self):\n test_start = (\n \"\"\" ######\n #0 ..#\n #.. 1#\n ###### \"\"\")\n # the game lasts two rounds, enough time for bot 1 to eat food\n NUM_ROUNDS = 2\n # bot 1 moves east twice to eat the single food\n teams = [\n SimpleTeam(TestPlayer('>>')),\n SimpleTeam(StoppingPlayer())\n ]\n gm = GameMaster(test_start, teams, 2, game_time=NUM_ROUNDS)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 0)\n self.assertEqual(gm.game_state[\"round_index\"], NUM_ROUNDS)", "metadata": "root.TestGame.test_win_on_timeout_team_0", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 540 }, { "content": " def test_win_on_timeout_team_1(self):\n test_start = (\n \"\"\" ######\n #0 ..#\n #.. 1#\n ###### \"\"\")\n # the game lasts two rounds, enough time for bot 1 to eat food\n NUM_ROUNDS = 2\n\n teams = [\n SimpleTeam(StoppingPlayer()),\n SimpleTeam(TestPlayer('<<')) # bot 1 moves west twice to eat the single food\n ]\n gm = GameMaster(test_start, teams, 2, game_time=NUM_ROUNDS)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)\n self.assertEqual(gm.game_state[\"round_index\"], NUM_ROUNDS)", "metadata": "root.TestGame.test_win_on_timeout_team_1", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 573 }, { "content": " def test_win_on_eating_all(self):\n test_start = (\n \"\"\" ######\n #0 . #\n # . 1#\n ###### \"\"\"\n )\n teams = [\n SimpleTeam(StoppingPlayer()),\n SimpleTeam(TestPlayer('<<<'))\n ]\n # bot 1 eats all the food and the game stops\n gm = GameMaster(test_start, teams, 2, 100)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)\n self.assertEqual(tv.cache[-1][\"round_index\"], 1)\n self.assertEqual(gm.game_state[\"round_index\"], 1)", "metadata": "root.TestGame.test_win_on_eating_all", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 635 }, { "content": " def test_lose_on_eating_all(self):\n test_start = (\n \"\"\" ######\n #0 . #\n # . 1#\n ###### \"\"\"\n )\n teams = [\n SimpleTeam(StoppingPlayer()),\n SimpleTeam(TestPlayer('<<<'))\n ]\n # bot 1 eats all the food and the game stops\n gm = GameMaster(test_start, teams, 2, 100)\n gm.universe.teams[0].score = 2\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertEqual(tv.cache[-1][\"round_index\"], 1)\n self.assertEqual(gm.universe.teams[0].score, 2)\n self.assertEqual(gm.universe.teams[1].score, 1)\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 0)\n self.assertEqual(gm.game_state[\"round_index\"], 1)", "metadata": "root.TestGame.test_lose_on_eating_all", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 668 }, { "content": " def test_lose_5_timeouts(self):\n # 0 must move back and forth because of random steps\n test_start = (\n \"\"\" ######\n #0 #.#\n ### #\n ##. 1#\n ###### \"\"\"\n )\n # players do nothing\n class TimeOutPlayer(AbstractPlayer):\n def get_move(self):\n raise PlayerTimeout\n\n teams = [\n SimpleTeam(TimeOutPlayer()),\n SimpleTeam(StoppingPlayer())\n ]\n # the game lasts one round, and then draws\n gm = GameMaster(test_start, teams, 2, 100, max_timeouts=5)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n\n self.assertEqual(gm.universe.bots[0].current_pos, (1,1))\n\n gm.play()\n\n # check\n self.assertEqual(gm.game_state[\"max_timeouts\"], 5)\n self.assertEqual(tv.cache[-1][\"round_index\"], gm.game_state[\"max_timeouts\"] - 1)\n self.assertEqual(gm.universe.teams[0].score, 0)\n self.assertEqual(gm.universe.teams[1].score, 0)\n # the bot moves four times, so after the fourth time,\n # it is back on its original position\n self.assertEqual(gm.universe.bots[0].current_pos, (1,1))\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)", "metadata": "root.TestGame.test_lose_5_timeouts", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 704 }, { "content": " def test_must_not_move_after_last_timeout(self):\n # 0 must move back and forth because of random steps\n # but due to its last timeout, it should be disqualified\n # immediately\n test_start = (\n \"\"\" ######\n ##0.##\n # ## #\n ##. 1#\n ###### \"\"\"\n )\n # players do nothing\n class TimeOutPlayer(AbstractPlayer):\n def get_move(self):\n raise PlayerTimeout\n\n class CheckTestPlayer(AbstractPlayer):\n def get_move(self):\n raise RuntimeError(\"This should never be called\")\n\n teams = [\n SimpleTeam(TimeOutPlayer()),\n SimpleTeam(CheckTestPlayer())\n ]\n # the game lasts one round, and then draws\n gm = GameMaster(test_start, teams, 2, 100, max_timeouts=1)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n\n gm.play()\n print(gm.universe.pretty)\n print(gm.game_state)\n\n # check\n self.assertEqual(gm.game_state[\"max_timeouts\"], 1)\n self.assertEqual(tv.cache[-1][\"round_index\"], gm.game_state[\"max_timeouts\"] - 1)\n self.assertEqual(gm.universe.teams[0].score, 0)\n self.assertEqual(gm.universe.teams[1].score, 0)\n self.assertEqual(gm.universe.bots[0].current_pos, (2,1))\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)\n\n # the game ends in round 0 with bot_id 0\n self.assertEqual(gm.game_state[\"round_index\"], 0)\n self.assertEqual(gm.game_state[\"bot_id\"], 0)", "metadata": "root.TestGame.test_must_not_move_after_last_timeout", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 752 }, { "content": " def test_play_step(self):\n\n test_start = (\n \"\"\" ########\n # 0 ..#\n #.. 1 #\n ######## \"\"\")\n\n number_bots = 2\n\n\n teams = [\n SimpleTeam(TestPlayer('>>>>')),\n SimpleTeam(TestPlayer('<<<<'))\n ]\n gm = GameMaster(test_start, teams, number_bots, 4)\n\n gm.set_initial()\n\n gm.play_round()\n self.assertEqual(gm.universe.bots[0].current_pos, (3,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (4,2))\n self.assertEqual(gm.game_state[\"round_index\"], 0)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertFalse(gm.game_state[\"finished\"])\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (4,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (4,2))\n self.assertEqual(gm.game_state[\"round_index\"], 1)\n self.assertEqual(gm.game_state[\"bot_id\"], 0)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (4,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (3,2))\n self.assertEqual(gm.game_state[\"round_index\"], 1)\n self.assertEqual(gm.game_state[\"bot_id\"], 1)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (5,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (3,2))\n self.assertEqual(gm.game_state[\"round_index\"], 2)\n self.assertEqual(gm.game_state[\"bot_id\"], 0)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (5,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (2,2))\n self.assertEqual(gm.game_state[\"round_index\"], 2)\n self.assertEqual(gm.game_state[\"bot_id\"], 1)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_round()\n # first call tries to finish current round (which already is finished)\n # so nothing happens\n self.assertEqual(gm.universe.bots[0].current_pos, (5,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (2,2))\n self.assertEqual(gm.game_state[\"round_index\"], 2)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], False)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], None)\n\n gm.play_round()\n # second call works\n self.assertEqual(gm.universe.bots[0].current_pos, (6,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (1,2))\n self.assertEqual(gm.game_state[\"round_index\"], 3)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], True)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], True)\n\n # Game finished because all food was eaten\n # team 0 finished first but the round was played regularly to the end\n # (hence round_index == 3 and bot_id is None)\n\n # nothing happens anymore\n gm.play_round()\n self.assertEqual(gm.universe.bots[0].current_pos, (6,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (1,2))\n self.assertEqual(gm.game_state[\"round_index\"], 3)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], True)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], True)\n\n # nothing happens anymore\n gm.play_round()\n self.assertEqual(gm.universe.bots[0].current_pos, (6,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (1,2))\n self.assertEqual(gm.game_state[\"round_index\"], 3)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], True)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], True)", "metadata": "root.TestGame.test_play_step", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 809 } ]	[ { "span": "self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)", "start_line": 569, "start_column": 8, "end_line": 569, "end_column": 62 }, { "span": "self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)", "start_line": 602, 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Unused local variable	CGATOxford/cgat/scripts/bam2geneprofile.py	[ { "content": "def main(argv=None):\n \"\"\"script main.\n\n parses command line options in sys.argv, unless argv is given.\n \"\"\"\n\n if not argv:\n argv = sys.argv\n\n # setup command line parser\n parser = E.OptionParser(version=\"%prog version: $Id$\",\n usage=globals()[\"__doc__\"])\n\n parser.add_option(\"-m\", \"--method\", dest=\"methods\", type=\"choice\",\n action=\"append\",\n choices=(\"geneprofile\", \"tssprofile\", \"utrprofile\",\n \"intervalprofile\", \"midpointprofile\",\n \"geneprofilewithintrons\",\n \"geneprofileabsolutedistancefromthreeprimeend\",\n \"separateexonprofile\",\n \"separateexonprofilewithintrons\",\n ),\n help='counters to use. Counters describe the '\n 'meta-gene structure to use. '\n 'Note using geneprofilewithintrons, or '\n 'geneprofileabsolutedistancefromthreeprimeend will '\n 'automatically turn on the --use-base-accuracy option'\n '[%default].')\n\n parser.add_option(\"-b\", \"--bam-file\", \"--bedfile\", \"--bigwigfile\",\n dest=\"infiles\",\n metavar=\"BAM\",\n type=\"string\", action=\"append\",\n help=\"BAM/bed/bigwig files to use. Do not mix \"\n \"different types [%default]\")\n\n parser.add_option(\"-c\", \"--control-bam-file\", dest=\"controlfiles\",\n metavar=\"BAM\",\n type=\"string\", action=\"append\",\n help=\"control/input to use. Should be of the same \"\n \"type as the bam/bed/bigwig file\"\n \" [%default]\")\n\n parser.add_option(\"-g\", \"--gtf-file\", dest=\"gtffile\", type=\"string\",\n metavar=\"GTF\",\n help=\"GTF file to use. \"\n \"[%default]\")\n\n parser.add_option(\n \"--normalize-transcript\",\n dest=\"transcript_normalization\",\n type=\"choice\",\n choices=(\"none\", \"max\", \"sum\", \"total-max\", \"total-sum\"),\n help=\"normalization to apply on each transcript \"\n \"profile before adding to meta-gene profile. \"\n \"[%default]\")\n\n parser.add_option(\n \"--normalize-profile\",\n dest=\"profile_normalizations\",\n type=\"choice\", action=\"append\",\n choices=(\"all\", \"none\", \"area\", \"counts\", \"background\"),\n help=\"normalization to apply on meta-gene \"\n \"profile normalization. \"\n \"[%default]\")\n\n parser.add_option(\n \"-r\", \"--reporter\", dest=\"reporter\", type=\"choice\",\n choices=(\"gene\", \"transcript\"),\n help=\"report results for genes or transcripts.\"\n \" When 'genes` is chosen, exons across all transcripts for\"\n \" a gene are merged. When 'transcript' is chosen, counts are\"\n \" computed for each transcript separately with each transcript\"\n \" contributing equally to the meta-gene profile.\"\n \" [%default]\")\n\n parser.add_option(\"-i\", \"--shift-size\", dest=\"shifts\", type=\"int\",\n action=\"append\",\n help=\"shift reads in :term:`bam` formatted file \"\n \"before computing densities (ChIP-Seq). \"\n \"[%default]\")\n\n parser.add_option(\"-a\", \"--merge-pairs\", dest=\"merge_pairs\",\n action=\"store_true\",\n help=\"merge pairs in :term:`bam` formatted \"\n \"file before computing \"\n \"densities (ChIP-Seq). \"\n \"[%default]\")\n\n parser.add_option(\"-u\", \"--use-base-accuracy\", dest=\"base_accuracy\",\n action=\"store_true\",\n help=\"compute densities with base accuracy. The default \"\n \"is to only use the start and end of the aligned region \"\n \"(RNA-Seq) \"\n \"[%default]\")\n\n parser.add_option(\"-e\", \"--extend\", dest=\"extends\", type=\"int\",\n action=\"append\",\n help=\"extend reads in :term:`bam` formatted file \"\n \"(ChIP-Seq). \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-upstream\", dest=\"resolution_upstream\",\n type=\"int\",\n help=\"resolution of upstream region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-downstream\", dest=\"resolution_downstream\",\n type=\"int\",\n help=\"resolution of downstream region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-upstream-utr\",\n dest=\"resolution_upstream_utr\",\n type=\"int\",\n help=\"resolution of upstream UTR region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-downstream-utr\",\n dest=\"resolution_downstream_utr\",\n type=\"int\",\n help=\"resolution of downstream UTR region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-cds\", dest=\"resolution_cds\", type=\"int\",\n help=\"resolution of cds region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-first-exon\", dest=\"resolution_first\",\n type=\"int\",\n help=\"resolution of first exon in gene, in bp\"\n \"[%default]\")\n\n parser.add_option(\"--resolution-last-exon\", dest=\"resolution_last\",\n type=\"int\",\n help=\"resolution of last exon in gene, in bp\"\n \"[%default]\")\n\n parser.add_option(\"--resolution-introns\",\n dest=\"resolution_introns\", type=\"int\",\n help=\"resolution of introns region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-exons-absolute-distance-topolya\",\n dest=\"resolution_exons_absolute_distance_topolya\",\n type=\"int\",\n help=\"resolution of exons absolute distance \"\n \"topolya in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-introns-absolute-distance-topolya\",\n dest=\"resolution_introns_absolute_distance_topolya\",\n type=\"int\",\n help=\"resolution of introns absolute distance \"\n \"topolya in bp \"\n \"[%default]\")\n\n parser.add_option(\"--extension-exons-absolute-distance-topolya\",\n dest=\"extension_exons_absolute_distance_topolya\",\n type=\"int\",\n help=\"extension for exons from the absolute \"\n \"distance from the topolya in bp \"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-introns-absolute-distance-topolya\",\n dest=\"extension_introns_absolute_distance_topolya\", type=\"int\",\n help=\"extension for introns from the absolute distance from \"\n \"the topolya in bp [%default]\")\n\n parser.add_option(\n \"--extension-upstream\", dest=\"extension_upstream\", type=\"int\",\n help=\"extension upstream from the first exon in bp\"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-downstream\", dest=\"extension_downstream\", type=\"int\",\n help=\"extension downstream from the last exon in bp\"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-inward\", dest=\"extension_inward\", type=\"int\",\n help=\"extension inward from a TSS start site in bp\"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-outward\", dest=\"extension_outward\", type=\"int\",\n help=\"extension outward from a TSS start site in bp\"\n \"[%default]\")\n\n parser.add_option(\"--scale-flank-length\", dest=\"scale_flanks\", type=\"int\",\n help=\"scale flanks to (integer multiples of) gene length\"\n \"[%default]\")\n\n parser.add_option(\n \"--control-factor\", dest=\"control_factor\", type=\"float\",\n help=\"factor for normalizing control and foreground data. \"\n \"Computed from data if not set. \"\n \"[%default]\")\n\n parser.add_option(\"--output-all-profiles\", dest=\"output_all_profiles\",\n action=\"store_true\",\n help=\"keep individual profiles for each \"\n \"transcript and output. \"\n \"[%default]\")\n\n parser.add_option(\"--counts-tsv-file\", dest=\"input_filename_counts\",\n type=\"string\",\n help=\"filename with count data for each transcript. \"\n \"Use this instead \"\n \"of recomputing the profile. Useful for plotting the \"\n \"meta-gene profile \"\n \"from previously computed counts \"\n \"[%default]\")\n\n parser.add_option(\n \"--background-region-bins\",\n dest=\"background_region_bins\",\n type=\"int\",\n help=\"number of bins on either end of the profile \"\n \"to be considered for background meta-gene normalization \"\n \"[%default]\")\n\n parser.set_defaults(\n remove_rna=False,\n ignore_pairs=False,\n force_output=False,\n bin_size=10,\n extends=[],\n shifts=[],\n sort=[],\n reporter=\"transcript\",\n resolution_cds=1000,\n resolution_introns=1000,\n # 3kb is a good balance of seeing long enough 3 prime bias and not omit\n # too many genes. Tim 31th Aug 2013\n resolution_exons_absolute_distance_topolya=3000,\n # introns is only for assess the noise level, thus do ont need a long\n # region, a long region has the side effect of omit more genes. Tim\n # 31th Aug 2013\n resolution_introns_absolute_distance_topolya=500,\n # extension can simply just be the same as resolution\n extension_exons_absolute_distance_topolya=3000,\n extension_introns_absolute_distance_topolya=500,\n resolution_upstream_utr=1000,\n resolution_downstream_utr=1000,\n resolution_upstream=1000,\n resolution_downstream=1000,\n resolution_first=1000,\n resolution_last=1000,\n # mean length of transcripts: about 2.5 kb\n extension_upstream=2500,\n extension_downstream=2500,\n extension_inward=3000,\n extension_outward=3000,\n plot=True,\n methods=[],\n infiles=[],\n controlfiles=[],\n gtffile=None,\n profile_normalizations=[],\n transcript_normalization=None,\n scale_flanks=0,\n merge_pairs=False,\n min_insert_size=0,\n max_insert_size=1000,\n base_accuracy=False,\n matrix_format=\"single\",\n control_factor=None,\n output_all_profiles=False,\n background_region_bins=10,\n input_filename_counts=None,\n )\n\n # add common options (-h/--help, ...) and parse command line\n (options, args) = E.Start(parser, argv=argv, add_output_options=True)\n\n # Keep for backwards compatability\n if len(args) == 2:\n infile, gtf = args\n options.infiles.append(infile)\n options.gtffile = gtf\n\n if not options.gtffile:\n raise ValueError(\"no GTF file specified\")\n\n if options.gtffile == \"-\":\n options.gtffile = options.stdin\n else:\n options.gtffile = IOTools.openFile(options.gtffile)\n\n if len(options.infiles) == 0:\n raise ValueError(\"no bam/wig/bed files specified\")\n\n for methodsRequiresBaseAccuracy in [\n \"geneprofilewithintrons\",\n \"geneprofileabsolutedistancefromthreeprimeend\",\n ]:\n # If you implemented any methods that you do not want the\n # spliced out introns or exons appear to be covered by\n # non-existent reads, it is better you let those methods imply\n # --base-accurarcy by add them here.\n if methodsRequiresBaseAccuracy in options.methods:\n options.base_accuracy = True\n\n if options.reporter == \"gene\":\n gtf_iterator = GTF.flat_gene_iterator(GTF.iterator(options.gtffile))\n elif options.reporter == \"transcript\":\n gtf_iterator = GTF.transcript_iterator(GTF.iterator(options.gtffile))\n\n # Select rangecounter based on file type\n if len(options.infiles) > 0:\n if options.infiles[0].endswith(\".bam\"):\n bamfiles = [pysam.Samfile(x, \"rb\") for x in options.infiles]\n\n if options.controlfiles:\n controlfiles = [pysam.Samfile(x, \"rb\")\n for x in options.controlfiles]\n else:\n controlfiles = None\n\n format = \"bam\"\n if options.merge_pairs:\n range_counter = _bam2geneprofile.RangeCounterBAM(\n bamfiles,\n shifts=options.shifts,\n extends=options.extends,\n merge_pairs=options.merge_pairs,\n min_insert_size=options.min_insert_size,\n max_insert_size=options.max_insert_size,\n controfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.shifts or options.extends:\n range_counter = _bam2geneprofile.RangeCounterBAM(\n bamfiles,\n shifts=options.shifts,\n extends=options.extends,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.base_accuracy:\n range_counter = _bam2geneprofile.RangeCounterBAMBaseAccuracy(\n bamfiles,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n else:\n range_counter = _bam2geneprofile.RangeCounterBAM(\n bamfiles,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.infiles[0].endswith(\".bed.gz\"):\n bedfiles = [pysam.Tabixfile(x) for x in options.infiles]\n\n if options.controlfiles:\n controlfiles = [pysam.Tabixfile(x)\n for x in options.controlfiles]\n else:\n controlfiles = None\n\n range_counter = _bam2geneprofile.RangeCounterBed(\n bedfiles,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.infiles[0].endswith(\".bw\"):\n wigfiles = [BigWigFile(file=open(x)) for x in options.infiles]\n range_counter = _bam2geneprofile.RangeCounterBigWig(wigfiles)\n\n else:\n raise NotImplementedError(\n \"can't determine file type for %s\" % str(options.infiles))\n\n counters = []\n for method in options.methods:\n if method == \"utrprofile\":\n counters.append(_bam2geneprofile.UTRCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_upstream_utr,\n options.resolution_cds,\n options.resolution_downstream_utr,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream,\n ))\n\n elif method == \"geneprofile\":\n counters.append(_bam2geneprofile.GeneCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_cds,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream,\n options.scale_flanks))\n\n elif method == \"geneprofilewithintrons\":\n counters.append(_bam2geneprofile.GeneCounterWithIntrons(\n range_counter,\n options.resolution_upstream,\n options.resolution_cds,\n options.resolution_introns,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream,\n options.scale_flanks))\n\n elif method == \"geneprofileabsolutedistancefromthreeprimeend\":\n # options.extension_exons_absolute_distance_tostartsite,\n # options.extension_introns_absolute_distance_tostartsite,\n # Tim 31th Aug 2013: a possible feature for future, if five prime\n # bias is of your interest.\n # (you need to create another class). It is not very difficult to\n # derive from this class, but is not implemented yet\n # This future feature is slightly different the TSS profile\n # already implemented, because in this future feature introns are\n # skipped,\n counters.append(\n _bam2geneprofile.GeneCounterAbsoluteDistanceFromThreePrimeEnd(\n range_counter, options.resolution_upstream,\n options.resolution_downstream,\n options.resolution_exons_absolute_distance_topolya,\n options.resolution_introns_absolute_distance_topolya,\n options.extension_upstream,\n options.extension_downstream,\n options.extension_exons_absolute_distance_topolya,\n options.extension_introns_absolute_distance_topolya,\n options.scale_flanks))\n\n elif method == \"tssprofile\":\n counters.append(_bam2geneprofile.TSSCounter(\n range_counter,\n options.extension_outward,\n options.extension_inward))\n\n elif method == \"intervalprofile\":\n counters.append(_bam2geneprofile.RegionCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_cds,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n elif method == \"midpointprofile\":\n counters.append(_bam2geneprofile.MidpointCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n # add new method to split 1st and last exons out\n # requires a representative transcript for reach gene\n # gtf should be sorted gene-position\n elif method == \"separateexonprofile\":\n counters.append(_bam2geneprofile.SeparateExonCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_first,\n options.resolution_last,\n options.resolution_cds,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n elif method == \"separateexonprofilewithintrons\":\n counters.append(_bam2geneprofile.SeparateExonWithIntronCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_first,\n options.resolution_last,\n options.resolution_cds,\n options.resolution_introns,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n # set normalization\n for c in counters:\n c.setNormalization(options.transcript_normalization)\n if options.output_all_profiles:\n c.setOutputProfiles(IOTools.openFile(E.getOutputFile(c.name) +\n \".profiles.tsv.gz\", \"w\"))\n\n if options.input_filename_counts:\n # read counts from file\n E.info(\"reading counts from %s\" % options.input_filename_counts)\n all_counts = pandas.read_csv(\n IOTools.openFile(options.input_filename_counts),\n sep='\\t', header=0, index_col=0)\n\n if len(counters) != 1:\n raise NotImplementedError(\n 'counting from matrix only implemented for 1 counter.')\n # build counter based on reference counter\n counter = _bam2geneprofile.UnsegmentedCounter(counters[0])\n counters = [counter]\n _bam2geneprofile.countFromCounts(counters, all_counts)\n\n else:\n E.info(\"starting counting with %i counters\" % len(counters))\n feature_names = _bam2geneprofile.countFromGTF(counters,\n gtf_iterator)\n\n # output matrices\n if not options.profile_normalizations:\n options.profile_normalizations.append(\"none\")\n elif \"all\" in options.profile_normalizations:\n options.profile_normalizations = [\"none\",\n \"area\",\n \"counts\",\n \"background\"]\n\n for method, counter in zip(options.methods, counters):\n profiles = []\n for norm in options.profile_normalizations:\n # build matrix, apply normalization\n profile = counter.getProfile(\n normalize=norm,\n background_region_bins=options.background_region_bins)\n profiles.append(profile)\n\n for x in range(1, len(profiles)):\n assert profiles[0].shape == profiles[x].shape\n\n # build a single matrix of all profiles for output\n matrix = numpy.concatenate(profiles)\n matrix.shape = len(profiles), len(profiles[0])\n matrix = matrix.transpose()\n\n with IOTools.openFile(E.getOutputFile(counter.name) +\n \".matrix.tsv.gz\", \"w\") as outfile:\n outfile.write(\"bin\\tregion\\tregion_bin\\t%s\\n\" % \"\\t\".join(\n options.profile_normalizations))\n fields = []\n bins = []\n for field, nbins in zip(counter.fields, counter.nbins):\n fields.extend([field] * nbins)\n bins.extend(list(range(nbins)))\n\n for row, cols in enumerate(zip(fields, bins, matrix)):\n outfile.write(\"%i\\t%s\\t\" %\n (row, \"\\t\".join([str(x) for x in cols[:-1]])))\n outfile.write(\"%s\\n\" %\n (\"\\t\".join([str(x) for x in cols[-1]])))\n\n with IOTools.openFile(E.getOutputFile(counter.name) +\n \".lengths.tsv.gz\", \"w\") as outfile:\n counter.writeLengthStats(outfile)\n\n if options.output_all_profiles:\n counter.closeOutputProfiles()\n\n if options.plot:\n\n import matplotlib\n # avoid Tk or any X\n matplotlib.use(\"Agg\")\n import matplotlib.pyplot as plt\n\n for method, counter in zip(options.methods, counters):\n\n if method in (\"geneprofile\",\n \"geneprofilewithintrons\",\n \"geneprofileabsolutedistancefromthreeprimeend\",\n \"utrprofile\",\n \"intervalprofile\",\n \"separateexonprofile\",\n \"separateexonprofilewithintrons\"):\n\n plt.figure()\n plt.subplots_adjust(wspace=0.05)\n max_scale = max([max(x) for x in counter.aggregate_counts])\n\n for x, counts in enumerate(counter.aggregate_counts):\n plt.subplot(6, 1, x + 1)\n plt.plot(range(len(counts)), counts)\n plt.title(counter.fields[x])\n plt.ylim(0, max_scale)\n\n figname = counter.name + \".full\"\n\n fn = E.getOutputFile(figname) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n plt.figure()\n\n points = []\n cuts = []\n for x, counts in enumerate(counter.aggregate_counts):\n points.extend(counts)\n cuts.append(len(counts))\n\n plt.plot(range(len(points)), points)\n\n xx, xxx = 0, []\n for x in cuts:\n xxx.append(xx + x // 2)\n xx += x\n plt.axvline(xx,\n color=\"r\",\n ls=\"--\")\n\n plt.xticks(xxx, counter.fields)\n\n figname = counter.name + \".detail\"\n\n fn = E.getOutputFile(figname) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n elif method == \"tssprofile\":\n\n plt.figure()\n plt.subplot(1, 3, 1)\n plt.plot(range(-options.extension_outward,\n options.extension_inward),\n counter.aggregate_counts[0])\n plt.title(counter.fields[0])\n plt.subplot(1, 3, 2)\n plt.plot(range(-options.extension_inward,\n options.extension_outward),\n counter.aggregate_counts[1])\n plt.title(counter.fields[1])\n plt.subplot(1, 3, 3)\n plt.title(\"combined\")\n plt.plot(range(-options.extension_outward,\n options.extension_inward),\n counter.aggregate_counts[0])\n plt.plot(range(-options.extension_inward,\n options.extension_outward),\n counter.aggregate_counts[1])\n plt.legend(counter.fields[:2])\n\n fn = E.getOutputFile(counter.name) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n elif method == \"midpointprofile\":\n\n plt.figure()\n plt.plot(numpy.arange(-options.resolution_upstream, 0),\n counter.aggregate_counts[0])\n plt.plot(numpy.arange(0, options.resolution_downstream),\n counter.aggregate_counts[1])\n\n fn = E.getOutputFile(counter.name) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n # write footer and output benchmark information.\n E.Stop()", "metadata": "root.main", "header": "['module', '___EOS___']", "index": 324 } ]	[ { "span": "format ", "start_line": 645, "start_column": 12, "end_line": 645, "end_column": 18 }, { "span": "feature_names ", "start_line": 828, "start_column": 8, "end_line": 828, "end_column": 21 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "main_", "(_", "argv_", "=_", "None_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "script", " ", "main", ".", "\\", "10", ";", "\\", "10", ";", " ", " ", " ", " ", "parse", "s", " ", "command", " ", "line", " ", "options", " ", "in", " ", "sys", ".", "argv", ",", " ", "unl", "ess", " ", "", "argv", "", " ", "is", " 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Unused local variable	saltstack/salt/salt/modules/elasticsearch.py	[ { "content": "def alias_create(indices, alias, hosts=None, body=None, profile=None):\n '''\n Create an alias for a specific index/indices\n\n CLI example::\n\n salt myminion elasticsearch.alias_create testindex_v1 testindex\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.indices.put_alias(index=indices, name=alias, body=body) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.alias_create", "header": "['module', '___EOS___']", "index": 100 }, { "content": "def document_create(index, doc_type, body=None, id=None, hosts=None, profile=None):\n '''\n Create a document in a specified index\n\n CLI example::\n\n salt myminion elasticsearch.document_create testindex doctype1 '{}'\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.index(index=index, doc_type=doc_type, body=body, id=id) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.document_create", "header": "['module', '___EOS___']", "index": 176 }, { "content": "def index_create(index, body=None, hosts=None, profile=None):\n '''\n Create an index\n\n CLI example::\n\n salt myminion elasticsearch.index_create testindex\n '''\n es = _get_instance(hosts, profile)\n try:\n if index_exists(index):\n return True\n else:\n result = es.indices.create(index=index, body=body) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.index_create", "header": "['module', '___EOS___']", "index": 255 }, { "content": "def mapping_create(index, doc_type, body, hosts=None, profile=None):\n '''\n Create a mapping in a given index\n\n CLI example::\n\n salt myminion elasticsearch.mapping_create testindex user '{ \"user\" : { \"properties\" : { \"message\" : {\"type\" : \"string\", \"store\" : true } } } }'\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.indices.put_mapping(index=index, doc_type=doc_type, body=body) # TODO error handling\n return mapping_get(index, doc_type)\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.mapping_create", "header": "['module', '___EOS___']", "index": 340 }, { "content": "def index_template_create(name, body, hosts=None, profile=None):\n '''\n Create an index template\n\n CLI example::\n\n salt myminion elasticsearch.index_template_create testindex_templ '{ \"template\": \"logstash-*\", \"order\": 1, \"settings\": { \"number_of_shards\": 1 } }'\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.indices.put_template(name=name, body=body) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.index_template_create", "header": "['module', '___EOS___']", "index": 395 } ]	[ { "span": "result ", 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Unused local variable	aws/aws-cli/tests/unit/test_argprocess.py	[ { "content": " def test_gen_structure_list_scalar_docs(self):\n schema = {\n \"type\": \"object\",\n \"properties\": {\n \"Consistent\": {\n \"type\": \"boolean\",\n },\n \"Args\": {\n \"type\": \"array\",\n \"items\": {\n \"type\": \"string\"\n }\n }\n }\n }\n argument_model = create_argument_model_from_schema(schema)\n m = model.DenormalizedStructureBuilder().with_members(OrderedDict([\n ('Consistent', {'type': 'boolean'}),\n ('Args', { 'type': 'list', 'member': { 'type': 'string', }}),\n ])).build_model()\n generated_example = self.shorthand_documenter.generate_shorthand_example(\n '--foo', m)\n self.assertIn('Consistent=boolean,Args=string,string',\n generated_example)", "metadata": "root.TestDocGen.test_gen_structure_list_scalar_docs", "header": "['class', 'TestDocGen', '(', 'BaseArgProcessTest', ')', ':', '___NEWLINE___', \"# These aren't very extensive doc tests, as we want to stay somewhat\", '___NL___', '# flexible and allow the docs to slightly change without breaking these', '___NL___', '# tests.', '___NL___', '___EOS___']", "index": 536 }, { "content": " def test_can_gen_recursive_structure(self):\n argument = self.get_param_model('dynamodb.PutItem.Item')\n generated_example = self.get_generated_example_for(argument)", "metadata": "root.TestDocGen.test_can_gen_recursive_structure", "header": "['class', 'TestDocGen', '(', 'BaseArgProcessTest', ')', ':', '___NEWLINE___', \"# These aren't very extensive doc tests, as we want to stay somewhat\", '___NL___', '# flexible and allow the docs to slightly change without breaking these', '___NL___', '# tests.', '___NL___', '___EOS___']", "index": 561 } ]	[ { "span": "argument_model ", "start_line": 551, "start_column": 8, "end_line": 551, "end_column": 22 }, { "span": "generated_example ", "start_line": 563, "start_column": 8, "end_line": 563, "end_column": 25 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", 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Unused import	ufora/ufora/ufora/FORA/Axioms/generateAxiomSignatures.py	[ { "content": "# Copyright 2015 Ufora Inc.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\n\"\"\"\nRun this script to generate a file of axiom signatures which can be fed into Axioms_consistency_test.py.\nThis generates all axioms, but by default comments them all out. Uncomment the ones you want to test.\n\"\"\"\n\nimport ufora.native\nimport ufora.FORA.python.Runtime as Runtime\nimport ufora.native.FORA as FORANative\nimport os\n\ndir = os.path.dirname(__file__)\nAXIOMS_TO_TEST_FILENAME = os.path.join(dir, \"AXIOMS_TO_TEST.txt\")\n\nruntime = Runtime.getMainRuntime()\naxioms = runtime.getAxioms()\n\nreadme_string = '\"\"\"\\nThis file lists all the axioms we would like to check for consistency in\\nAxioms_consistency_test.py. It supports basic python-like commenting\\n\"\"\"\\n\\n'\n\nwith open(AXIOMS_TO_TEST_FILENAME, \"w\") as f:\n f.write(readme_string)\n f.write('\"\"\"\\n')\n for i in range(axioms.axiomCount):\n f.write(\"%s\\n\" %axioms.getAxiomGroupByIndex(i).signature())\n f.write('\"\"\"')\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "import ufora.native", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 19 }, { "span": "import ufora.native.FORA as FORANative", "start_line": 21, "start_column": 0, "end_line": 21, "end_column": 38 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", " ", " ", "Copy", "right", " ", "201", "5", " ", "Uf", "ora", " ", "Inc", "._", "\\u\\u\\uNL\\u\\u\\u_", "#", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", " ", " ", "License", "d", " ", "under", " ", "the", " ", "Ap", "ache", " ", "License", ",", " ", "Version", " ", "2.0", " ", "(", "the", " ", "\"", 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Unused import	nigma/django-session-activity/session_activity/conf.py	[ { "content": "#-- coding: utf-8 --\n\nfrom __future__ import absolute_import, division, print_function, unicode_literals\n\nimport datetime\n\nfrom django.conf import settings\n\nfrom appconf import AppConf\n\n\nSESSION_IP_KEY = \"_activity_ip\"\nSESSION_LAST_USED_KEY = \"_activity_last_used\"\nSESSION_USER_AGENT_KEY = \"_activity_user_agent\"\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class SessionActivityAppConf(AppConf):\n\n UPDATE_THROTTLE = datetime.timedelta(minutes=5)\n", "metadata": "root.SessionActivityAppConf", "header": "['module', '___EOS___']", "index": 16 }, { "content": " def configure_update_throttle(self, value):\n if isinstance(value, int):\n value = datetime.timedelta(seconds=value)\n return value", "metadata": "root.SessionActivityAppConf.configure_update_throttle", "header": "['class', 'SessionActivityAppConf', '(', 'AppConf', ')', ':', '___EOS___']", "index": 20 } ]	[ { "span": "from django.conf import settings", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 32 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#-", "-", " ", "codi", "ng", ":", " ", "utf", "-", "8", " ", "--", "_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "\\u\\u", "future\\u\\u_", "import_", "abs", "olute", "\\u", "import_", ",_", "division_", ",_", "print", "\\u", "function_", ",_", "unicode", "\\u", "literals_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "datetime_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "django_", "._", "conf_", "import_", "settings_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "appc", "onf_", "import_", "App", "Conf_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "SES", "SION", "\\u", "IP", "\\u", "KEY_", "=_", "\"\\u", "activit", "y", "\\u", "ip", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "SES", "SION", "\\u", "LAS", "T", "\\u", "USED", "\\u", "KEY_", "=_", "\"\\u", "activit", "y", "\\u", "last", "\\u", "used", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "SES", "SION", "\\u", "USER", "\\u", "AGE", "NT", "\\u", "KEY_", "=_", "\"\\u", "activit", "y", "\\u", "user", "\\u", "agent", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "class_", "Sess", "ion", "Activ", "it", "y", "App", "Conf_", "(_", "App", "Conf_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "UPDATE", "\\u", "THRO", "TTL", "E_", "=_", "datetime_", "._", "timedelta_", "(_", "minutes_", "=_", "5_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "[SEP]_", "class_", "Sess", "ion", "Activ", "it", "y", "App", "Conf_", "(_", "App", "Conf_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "configur", "e\\u", "update", "\\u", "throttle_", "(_", "self_", ",_", "value_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "if_", "isinstance_", "(_", "value_", ",_", "int_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "value_", "=_", "datetime_", "._", "timedelta_", "(_", "seconds_", "=_", "value_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "value_" ]	[ 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	treeio/treeio/treeio/sales/forms.py	[ { "content": " def __init__(self, user, skip=None, args, kwargs):\n if skip is None:\n skip = []\n super(ProductFilterForm, self).__init__(args, *kwargs)\n\n self.fields['product_type'].queryset = Object.filter_permitted(user,\n Product.objects.filter(active=True))\n self.fields['product_type'].required = False\n self.fields['product_type'].label = _(\"Product type\")\n\n self.fields['supplier'].queryset = Object.filter_permitted(\n user, Contact.objects)\n self.fields['supplier'].required = False\n self.fields['supplier'].widget.attrs.update({'class': 'autocomplete',\n 'callback': reverse('identities_ajax_contact_lookup')})\n self.fields['supplier'].label = _(\"Supplier\")\n\n self.fields['active'].required = False\n self.fields['active'].initial = True\n self.fields['active'].label = _(\"Active\")", "metadata": "root.ProductFilterForm.__init__", "header": "['class', 'ProductFilterForm', '(', 'forms', '.', 'ModelForm', ')', ':', '___EOS___']", "index": 583 }, { "content": " def __init__(self, user, skip=None, args, *kwargs):\n if skip is None:\n skip = []\n super(LeadFilterForm, self).__init__(args, *kwargs)\n\n self.fields['contact'].queryset = Object.filter_permitted(\n user, Contact.objects)\n self.fields['contact'].widget.attrs.update({'class': 'autocomplete',\n 'callback': reverse('identities_ajax_contact_lookup')})\n self.fields['contact'].required = False\n self.fields['contact'].label = _(\"Contact\")\n\n self.fields['products_interested'].queryset = Object.filter_permitted(\n user, Product.objects)\n self.fields['products_interested'].required = False\n self.fields['products_interested'].help_text = \"\"\n self.fields['products_interested'].label = _(\"Products interested\")\n\n self.fields['source'].queryset = Object.filter_permitted(user,\n SaleSource.objects.filter(active=True))\n self.fields['source'].required = False\n self.fields['source'].label = _(\"Source\")\n\n self.fields['status'].queryset = Object.filter_permitted(user,\n SaleStatus.objects.filter(use_leads=True))\n self.fields['status'].required = False\n self.fields['status'].label = _(\"Status\")\n\n self.fields['contact_method'].required = False\n self.fields['contact_method'].label = _(\"Contact method\")", "metadata": "root.LeadFilterForm.__init__", "header": "['class', 'LeadFilterForm', '(', 'forms', '.', 'ModelForm', ')', ':', '___EOS___']", "index": 937 }, { "content": " def __init__(self, user, skip=None, args, *kwargs):\n if skip is None:\n skip = []\n super(OpportunityFilterForm, self).__init__(args, **kwargs)\n\n self.fields['contact'].queryset = Object.filter_permitted(\n user, Contact.objects)\n self.fields['contact'].widget.attrs.update({'class': 'autocomplete',\n 'callback': reverse('identities_ajax_contact_lookup')})\n self.fields['contact'].required = False\n self.fields['contact'].label = _(\"Contact\")\n\n self.fields['source'].queryset = Object.filter_permitted(user,\n SaleSource.objects.filter(active=True))\n self.fields['source'].required = False\n self.fields['source'].label = _(\"Source\")\n\n self.fields['products_interested'].queryset = Object.filter_permitted(user,\n Product.objects.filter(active=True))\n self.fields['products_interested'].required = False\n self.fields['products_interested'].help_text = \"\"\n self.fields['products_interested'].label = _(\"Products interested\")\n\n self.fields['status'].queryset = Object.filter_permitted(user,\n SaleStatus.objects.filter(use_opportunities=True))\n self.fields['status'].required = False\n self.fields['status'].label = _(\"Status\")", "metadata": "root.OpportunityFilterForm.__init__", "header": "['class', 'OpportunityFilterForm', '(', 'forms', '.', 'ModelForm', ')', ':', '___EOS___']", "index": 1062 } ]	[ { "span": "skip ", "start_line": 585, "start_column": 12, "end_line": 585, "end_column": 16 }, { "span": "skip ", "start_line": 939, "start_column": 12, "end_line": 939, "end_column": 16 }, { "span": "skip ", "start_line": 1064, "start_column": 12, "end_line": 1064, "end_column": 16 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", "Product", "Filter", "Form_", "(_", "forms_", "._", "Model", "Form_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "\\u\\u", "init\\u\\u_", "(_", "self_", ",_", "user_", ",_", "skip_", "=_", "None_", ",_", "_", "args_", ",_", "_", "kwargs_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "if_", "skip_", "is_", "None_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "skip_", "=_", "[_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "super_", "(_", "Product", "Filter", "Form_", ",_", "self_", ")_", "._", "\\u\\u", "init\\u\\u_", "(_", "_", "args_", ",_", "*_", "kwargs_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "product", 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"\\u\\u\\uNL\\u\\u\\u_", "Sal", "e", "Source_", "._", "objects_", "._", "filter_", "(_", "active_", "=_", "True_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "source", "'_", "]_", "._", "required_", "=_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "source", "'_", "]_", "._", "label_", "=_", "\\u_", "(_", "\"", "Sou", "rce", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "products", "\\u", "interest", "ed", "'_", "]_", "._", "queryset_", "=_", "Object_", "._", "filter", "\\u", "permit", "ted_", "(_", "user_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "Product_", "._", "objects_", "._", "filter_", "(_", "active_", "=_", "True_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "products", "\\u", "interest", "ed", "'_", "]_", "._", "required_", "=_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "products", "\\u", "interest", "ed", "'_", "]_", "._", "help", "\\u", "text_", "=_", "\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "products", "\\u", "interest", "ed", "'_", "]_", "._", "label_", "=_", "\\u_", "(_", "\"", "Product", "s", " ", "interest", "ed", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "status", "'_", "]_", "._", "queryset_", "=_", "Object_", "._", "filter", "\\u", "permit", "ted_", "(_", "user_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "Sal", "e", "Status_", "._", "objects_", "._", "filter_", "(_", "use", "\\u", "opportunit", "ies_", "=_", "True_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "status", "'_", "]_", "._", "required_", "=_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fields_", "[_", "'", "status", "'_", "]_", "._", "label_", "=_", "\\u_", "(_", "\"", "Status", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 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Unused import	simonw/bugle_project/bugle_project/bugle/management/commands/populate_is_todo.py	[ { "content": "from django.core.management.base import BaseCommand, CommandError\nfrom bugle.models import Blast\nfrom django.contrib.auth.models import User\nimport re, sys\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Command(BaseCommand):\n help = \"\"\"\n Ensures that all @username mentions are added to the mentions DB table\n \"\"\".strip()\n \n requires_model_validation = True\n can_import_settings = True\n ", "metadata": "root.Command", "header": "['module', '___EOS___']", "index": 5 }, { "content": " def handle(self, args, *options):\n if len(args) != 0:\n raise CommandError(\"Command doesn't accept any arguments\")\n \n for blast in Blast.objects.all():\n blast.is_todo = blast.derive_is_todo()\n blast.save()\n sys.stdout.write('.')\n sys.stdout.write(' done\\n')", "metadata": "root.Command.handle", "header": "['class', 'Command', '(', 'BaseCommand', ')', ':', '___EOS___']", "index": 13 } ]	[ { "span": "from django.contrib.auth.models import User", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 43 }, { "span": "import re, sys", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 14 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "django_", "._", "core_", "._", "management_", "._", "base_", "import_", "Base", "Command_", ",_", "Command", "Error_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "bug", "le_", "._", "models_", "import_", "Blast", "_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "django_", "._", "contrib_", "._", "auth_", "._", "models_", "import_", "User_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "re_", ",_", "sys_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "class_", "Command_", "(_", "Base", "Command_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "help_", "=_", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "Ensur", "es", " ", "tha", "t", " ", "all", " ", "@", "user", "name", " ", "mentions", " ", "are", " ", "adde", "d", " ", "to", " ", "the", " ", "mentions", " ", "DB", " ", "table", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "._", "strip_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "require", "s", "\\u", "model", "\\u", "validation_", "=_", "True_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "can", "\\u", "import", "\\u", "settings_", "=_", "True_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "[SEP]_", "class_", "Command_", "(_", "Base", "Command_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "handle_", "(_", "self_", ",_", "_", "args_", ",_", "*_", "options_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "if_", "len_", "(_", "args_", ")_", "!=_", "0_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "raise_", "Command", "Error_", "(_", "\"", "Command", " ", "doe", "sn", "'", "t", " ", "accept", " ", "any", " ", "argu", "ment", "s", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "for_", "blast", "_", "in_", "Blast", "_", "._", "objects_", "._", "all_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "blast", "_", "._", "is", "\\u", "todo_", "=_", "blast", "_", "._", "derive", "\\u", "is", "\\u", "todo_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "blast", "_", "._", "save_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "sys_", "._", "stdout_", "._", "write_", "(_", "'.'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "sys_", "._", "stdout_", "._", "write_", "(_", "'", " ", "don", "e", "\\\\", "n", "'_", ")_" ]	[ 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Imprecise assert	pydata/pandas/pandas/tests/series/test_misc_api.py	[ { "content": " def test_tab_completion(self):\n # GH 9910\n s = Series(list('abcd'))\n # Series of str values should have .str but not .dt/.cat in __dir__\n self.assertTrue('str' in dir(s))\n self.assertTrue('dt' not in dir(s))\n self.assertTrue('cat' not in dir(s))\n\n # similiarly for .dt\n s = Series(date_range('1/1/2015', periods=5))\n self.assertTrue('dt' in dir(s))\n self.assertTrue('str' not in dir(s))\n self.assertTrue('cat' not in dir(s))\n\n # similiarly for .cat, but with the twist that str and dt should be\n # there if the categories are of that type first cat and str\n s = Series(list('abbcd'), dtype=\"category\")\n self.assertTrue('cat' in dir(s))\n self.assertTrue('str' in dir(s)) # as it is a string categorical\n self.assertTrue('dt' not in dir(s))\n\n # similar to cat and str\n s = Series(date_range('1/1/2015', periods=5)).astype(\"category\")\n self.assertTrue('cat' in dir(s))\n self.assertTrue('str' not in dir(s))\n self.assertTrue('dt' in dir(s)) # as it is a datetime categorical", "metadata": "root.TestSeriesMisc.test_tab_completion", "header": "['class', 'TestSeriesMisc', '(', 'TestData', ',', 'SharedWithSparse', ',', 'tm', '.', 'TestCase', ')', ':', '___EOS___']", "index": 122 } ]	[ { "span": "self.assertTrue('str' in dir(s))", "start_line": 126, "start_column": 8, "end_line": 126, "end_column": 40 }, { "span": "self.assertTrue('dt' not in dir(s))", "start_line": 127, "start_column": 8, "end_line": 127, "end_column": 43 }, { "span": "self.assertTrue('cat' not in dir(s))", "start_line": 128, "start_column": 8, "end_line": 128, "end_column": 44 }, { "span": "self.assertTrue('dt' in dir(s))", "start_line": 132, "start_column": 8, "end_line": 132, "end_column": 39 }, { "span": "self.assertTrue('str' not in dir(s))", "start_line": 133, "start_column": 8, "end_line": 133, "end_column": 44 }, { "span": "self.assertTrue('cat' not in dir(s))", "start_line": 134, "start_column": 8, "end_line": 134, "end_column": 44 }, { "span": "self.assertTrue('cat' in dir(s))", "start_line": 139, "start_column": 8, "end_line": 139, "end_column": 40 }, { "span": "self.assertTrue('str' in dir(s)) ", "start_line": 140, "start_column": 8, "end_line": 140, "end_column": 40 }, { "span": "self.assertTrue('dt' not in dir(s))", "start_line": 141, "start_column": 8, "end_line": 141, "end_column": 43 }, { "span": "self.assertTrue('cat' in dir(s))", "start_line": 145, "start_column": 8, "end_line": 145, "end_column": 40 }, { "span": "self.assertTrue('str' not in dir(s))", "start_line": 146, "start_column": 8, "end_line": 146, "end_column": 44 }, { "span": "self.assertTrue('dt' in dir(s)) ", "start_line": 147, "start_column": 8, "end_line": 147, "end_column": 39 } ]	[]	1	true	[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Test", "Serie", "s", "Mis", "c_", "(_", "Test", "Data_", ",_", "Share", "d", "With", "Spar", "se_", ",_", "tm_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "test\\u", "tab", "\\u", "completion_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "GH", " ", "991", "0_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "s_", "=_", "Series_", "(_", "list_", "(_", "'", "abc", "d", "'_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "Serie", "s", " ", "of", " ", "str", " ", "values", " ", "shou", "ld", " ", "have", " ", ".", "str", " ", "but", " ", "not", " ", ".", "dt", "/.", "cat", " ", "in", " ", "\\u\\u", "dir\\u", "\\u_", "\\u\\u\\uNL\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "str", "'_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "dt", "'_", "not_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "cat", "'_", "not_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "simi", "lia", "rl", "y", " ", "for", " ", ".", "dt_", "\\u\\u\\uNL\\u\\u\\u_", "s_", "=_", "Series_", "(_", "date", "\\u", "range_", "(_", "'", "1", "/", "1", "/", "201", "5", "'_", ",_", "periods_", "=_", "5_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "dt", "'_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "str", "'_", "not_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "cat", "'_", "not_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "simi", "lia", "rl", "y", " ", "for", " ", ".", "cat", ",", " ", "but", " ", "with", " ", "the", " ", "twist", " ", "tha", "t", " ", "str", " ", "and", " ", "dt", " ", "shou", "ld", " ", "be_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "there", " ", "if", " ", "the", " ", "categor", "ies", " ", "are", " ", "of", " ", "tha", "t", " ", "type", " ", "first", " ", "cat", " ", "and", " ", "str_", "\\u\\u\\uNL\\u\\u\\u_", "s_", "=_", "Series_", "(_", "list_", "(_", "'", "abb", "cd", "'_", ")_", ",_", "dtype_", "=_", "\"", "category", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "cat", "'_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "str", "'_", "in_", "dir_", "(_", "s_", ")_", ")_", "#", " ", "as", " ", "it", " ", "is", " ", "a", " ", "string", " ", "categorical_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "dt", "'_", "not_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "similar", " ", "to", " ", "cat", " ", "and", " ", "str_", "\\u\\u\\uNL\\u\\u\\u_", "s_", "=_", "Series_", "(_", "date", "\\u", "range_", "(_", "'", "1", "/", "1", "/", "201", "5", "'_", ",_", "periods_", "=_", "5_", ")_", ")_", "._", "astype_", "(_", "\"", "category", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "cat", "'_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "str", "'_", "not_", "in_", "dir_", "(_", "s_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "dt", "'_", "in_", "dir_", "(_", "s_", ")_", ")_", "#", " ", "as", " ", "it", " ", "is", " ", "a", " ", "datetime", " ", "categorical_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Imprecise assert	mhrivnak/radiotherm/tests/field/test_build_get_return.py	[ { "content": " def test_with_name(self):\n field = Field('/fake', 'fake')\n ret = field._build_get_return(self.INT_RETURN_VALUE)\n self.assertTrue('raw' in ret)\n self.assertEqual(len(ret), 1)\n self.assertEqual(ret['raw'], self.INT_RETURN_VALUE['fake'])", "metadata": "root.TestBuildGetReturn.test_with_name", "header": "['class', 'TestBuildGetReturn', '(', 'BaseTestCase', ')', ':', '___EOS___']", "index": 9 }, { "content": " def test_without_name(self):\n field = Field('/fake', None)\n ret = field._build_get_return(self.NO_NAME_RETURN_VALUE)\n self.assertTrue('raw' in ret)\n self.assertEqual(len(ret), 1)\n self.assertEqual(ret['raw'], self.NO_NAME_RETURN_VALUE)", "metadata": "root.TestBuildGetReturn.test_without_name", "header": "['class', 'TestBuildGetReturn', '(', 'BaseTestCase', ')', ':', '___EOS___']", "index": 16 }, { "content": " def test_with_human(self):\n field = Field('/fake', 'fake', {0: 'Off', 1: 'On'})\n field._convert_to_human = MagicMock(return_value='On')\n ret = field._build_get_return(self.INT_RETURN_VALUE)\n self.assertTrue('raw' in ret)\n self.assertTrue('human' in ret)\n self.assertEqual(ret['human'], 'On')", "metadata": "root.TestBuildGetReturn.test_with_human", "header": "['class', 'TestBuildGetReturn', '(', 'BaseTestCase', ')', ':', '___EOS___']", "index": 23 } ]	[ { "span": "self.assertTrue('raw' in ret)", "start_line": 12, "start_column": 8, "end_line": 12, "end_column": 37 }, { "span": "self.assertTrue('raw' in ret)", "start_line": 19, "start_column": 8, "end_line": 19, "end_column": 37 }, { "span": "self.assertTrue('raw' in ret)", "start_line": 27, "start_column": 8, "end_line": 27, "end_column": 37 }, { "span": "self.assertTrue('human' in ret)", "start_line": 28, "start_column": 8, "end_line": 28, "end_column": 39 } ]	[]	1	true	[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Test", "Build", "Get", "Return_", "(_", "Base", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "test\\u", "with", "\\u", "name_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "field_", "=_", "Field_", "(_", "'/", "fake", "'_", ",_", "'", "fake", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "ret_", "=_", "field_", "._", "\\u", "build", "\\u", "get", "\\u", "return_", "(_", "self_", "._", "INT", "\\u", "RETURN", "\\u", "VALUE_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "raw", "'_", "in_", "ret_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "Equal_", "(_", "len_", "(_", "ret_", ")_", ",_", "1_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "Equal_", "(_", "ret_", "[_", "'", "raw", "'_", "]_", ",_", "self_", "._", "INT", "\\u", "RETURN", "\\u", "VALUE_", "[_", "'", "fake", "'_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "Test", "Build", "Get", "Return_", "(_", "Base", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "with", "out", "\\u", "name_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "field_", "=_", "Field_", "(_", "'/", "fake", "'_", ",_", "None_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "ret_", "=_", "field_", "._", "\\u", "build", "\\u", "get", "\\u", "return_", "(_", "self_", "._", "NO", "\\u", "NAME", "\\u", "RETURN", "\\u", "VALUE_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "raw", "'_", "in_", "ret_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "Equal_", "(_", "len_", "(_", "ret_", ")_", ",_", "1_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "Equal_", "(_", "ret_", "[_", "'", "raw", "'_", "]_", ",_", "self_", "._", "NO", "\\u", "NAME", "\\u", "RETURN", "\\u", "VALUE_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "Test", "Build", "Get", "Return_", "(_", "Base", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "with", "\\u", "human_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "field_", "=_", "Field_", "(_", "'/", "fake", "'_", ",_", "'", "fake", "'_", ",_", "{_", "0_", ":_", "'", "Off", "'_", ",_", "1_", ":_", "'", "On", "'_", "}_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "field_", "._", "\\u", "convert", "\\u", "to", "\\u", "human_", "=_", "Mag", "ic", "Mock_", "(_", "return", "\\u", "value_", "=_", "'", "On", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "ret_", "=_", "field_", "._", "\\u", "build", "\\u", "get", "\\u", "return_", "(_", "self_", "._", "INT", "\\u", "RETURN", "\\u", "VALUE_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "raw", "'_", "in_", "ret_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "human", "'_", "in_", "ret_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "Equal_", "(_", "ret_", "[_", "'", "human", "'_", "]_", ",_", "'", "On", "'_", ")_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused import	mvantellingen/localshop/docs/conf.py	[ { "content": "# -- coding: utf-8 --\n#\n# Localshop documentation build configuration file, created by\n# sphinx-quickstart on Mon Apr 27 13:39:49 2015.\n#\n# This file is execfile()d with the current directory set to its\n# containing dir.\n#\n# Note that not all possible configuration values are present in this\n# autogenerated file.\n#\n# All configuration values have a default; values that are commented out\n# serve to show the default.\n\nimport sys\nimport os\nimport shlex\n\n# If extensions (or modules to document with autodoc) are in another directory,\n# add these directories to sys.path here. If the directory is relative to the\n# documentation root, use os.path.abspath to make it absolute, like shown here.\n#sys.path.insert(0, os.path.abspath('.'))\n\n# -- General configuration ------------------------------------------------\n\n# If your documentation needs a minimal Sphinx version, state it here.\n#needs_sphinx = '1.0'\n\n# Add any Sphinx extension module names here, as strings. They can be\n# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom\n# ones.\nextensions = [\n 'sphinx.ext.autodoc',\n]\n\n# Add any paths that contain templates here, relative to this directory.\ntemplates_path = ['_templates']\n\n# The suffix(es) of source filenames.\n# You can specify multiple suffix as a list of string:\n# source_suffix = ['.rst', '.md']\nsource_suffix = '.rst'\n\n# The encoding of source files.\n#source_encoding = 'utf-8-sig'\n\n# The master toctree document.\nmaster_doc = 'index'\n\n# General information about the project.\nproject = u'Localshop'\ncopyright = u'2015, Michael van Tellingen'\nauthor = u'Michael van Tellingen'\n\n# The version info for the project you're documenting, acts as replacement for\n# \|version\| and \|release\|, also used in various other places throughout the\n# built documents.\n#\n# The short X.Y version.\nversion = '0.8.3'\n# The full version, including alpha/beta/rc tags.\nrelease = '0.8.3'\n\n# The language for content autogenerated by Sphinx. Refer to documentation\n# for a list of supported languages.\n#\n# This is also used if you do content translation via gettext catalogs.\n# Usually you set \"language\" from the command line for these cases.\nlanguage = None\n\n# There are two options for replacing \|today\|: either, you set today to some\n# non-false value, then it is used:\n#today = ''\n# Else, today_fmt is used as the format for a strftime call.\n#today_fmt = '%B %d, %Y'\n\n# List of patterns, relative to source directory, that match files and\n# directories to ignore when looking for source files.\nexclude_patterns = ['_build']\n\n# The reST default role (used for this markup: `text`) to use for all\n# documents.\n#default_role = None\n\n# If true, '()' will be appended to :func: etc. cross-reference text.\n#add_function_parentheses = True\n\n# If true, the current module name will be prepended to all description\n# unit titles (such as .. function::).\n#add_module_names = True\n\n# If true, sectionauthor and moduleauthor directives will be shown in the\n# output. They are ignored by default.\n#show_authors = False\n\n# The name of the Pygments (syntax highlighting) style to use.\npygments_style = 'sphinx'\n\n# A list of ignored prefixes for module index sorting.\n#modindex_common_prefix = []\n\n# If true, keep warnings as \"system message\" paragraphs in the built documents.\n#keep_warnings = False\n\n# If true, `todo` and `todoList` produce output, else they produce nothing.\ntodo_include_todos = False\n\n\n# -- Options for HTML output ----------------------------------------------\n\n# The theme to use for HTML and HTML Help pages. See the documentation for\n# a list of builtin themes.\n#html_theme = 'classic'\n\n# Theme options are theme-specific and customize the look and feel of a theme\n# further. For a list of options available for each theme, see the\n# documentation.\n#html_theme_options = {}\n\n# Add any paths that contain custom themes here, relative to this directory.\n#html_theme_path = []\n\n# The name for this set of Sphinx documents. If None, it defaults to\n# \"<project> v<release> documentation\".\n#html_title = None\n\n# A shorter title for the navigation bar. Default is the same as html_title.\n#html_short_title = None\n\n# The name of an image file (relative to this directory) to place at the top\n# of the sidebar.\n#html_logo = None\n\n# The name of an image file (within the static path) to use as favicon of the\n# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32\n# pixels large.\n#html_favicon = None\n\n# Add any paths that contain custom static files (such as style sheets) here,\n# relative to this directory. They are copied after the builtin static files,\n# so a file named \"default.css\" will overwrite the builtin \"default.css\".\nhtml_static_path = ['_static']\n\n# Add any extra paths that contain custom files (such as robots.txt or\n# .htaccess) here, relative to this directory. These files are copied\n# directly to the root of the documentation.\n#html_extra_path = []\n\n# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,\n# using the given strftime format.\n#html_last_updated_fmt = '%b %d, %Y'\n\n# If true, SmartyPants will be used to convert quotes and dashes to\n# typographically correct entities.\n#html_use_smartypants = True\n\n# Custom sidebar templates, maps document names to template names.\n#html_sidebars = {}\n\n# Additional templates that should be rendered to pages, maps page names to\n# template names.\n#html_additional_pages = {}\n\n# If false, no module index is generated.\n#html_domain_indices = True\n\n# If false, no index is generated.\n#html_use_index = True\n\n# If true, the index is split into individual pages for each letter.\n#html_split_index = False\n\n# If true, links to the reST sources are added to the pages.\n#html_show_sourcelink = True\n\n# If true, \"Created using Sphinx\" is shown in the HTML footer. Default is True.\n#html_show_sphinx = True\n\n# If true, \"(C) Copyright ...\" is shown in the HTML footer. Default is True.\n#html_show_copyright = True\n\n# If true, an OpenSearch description file will be output, and all pages will\n# contain a <link> tag referring to it. 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List of tuples\n# (source start file, target name, title,\n# author, documentclass [howto, manual, or own class]).\nlatex_documents = [\n (master_doc, 'Localshop.tex', u'Localshop Documentation',\n u'Michael van Tellingen', 'manual'),\n]\n\n# The name of an image file (relative to this directory) to place at the top of\n# the title page.\n#latex_logo = None\n\n# For \"manual\" documents, if this is true, then toplevel headings are parts,\n# not chapters.\n#latex_use_parts = False\n\n# If true, show page references after internal links.\n#latex_show_pagerefs = False\n\n# If true, show URL addresses after external links.\n#latex_show_urls = False\n\n# Documents to append as an appendix to all manuals.\n#latex_appendices = []\n\n# If false, no module index is generated.\n#latex_domain_indices = True\n\n\n# -- Options for manual page output ---------------------------------------\n\n# One entry per manual page. 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Use of 'global' at module level	RicterZ/reprocks/client/reprocks_client.py	[ { "content": "#! /usr/bin/python\n\nimport threading\nimport socket\nimport sys,time\nimport SocketServer,struct,select\n\nglobal bufLen\nglobal endflag\nglobal socksPort\n###################\nsocksPort = 50000 #Default socks5 proxy port\n###################\nendflag = []\nbufLen = 4*1024\n\n\n\n\n\n\n\n\n\n\n\nif __name__ == '__main__':\n main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "global bufLen", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 13 }, { "span": "global endflag", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 14 }, { "span": "global socksPort", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 16 } ]	[]	1	true	[ "[CLS]_", "Use_", "of_", "'", "global", "'_", "at_", "module_", "level_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#!", " ", "/", "usr", "/", "bin", "/", "python_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "threading_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "socket_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "sys_", ",_", "time_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "Sock", "et", "Server_", ",_", "struct_", ",_", "select_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "global_", "buf", "Len_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "global_", "endf", "lag_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "global_", "socks", "Port_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "###########", "######", "##", "_", "\\u\\u\\uNL\\u\\u\\u_", "socks", "Port_", "=_", "50000_", "#", "Default", " ", "socks", "5", " ", "proxy", " ", "port_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "###########", "######", "##", "_", "\\u\\u\\uNL\\u\\u\\u_", "endf", "lag_", "=_", "[_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "buf", "Len_", "=_", "4_", "*_", "1024_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "\\u\\u", "name\\u\\u_", "==_", "'\\u", "\\u", "main", "\\u\\u'_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "main_", "(_", ")_", "\\u\\u\\uDEDENT\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 0, 1, 1, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Missing call to `__init__` during object initialization	azoft-dev-team/imagrium/env/Lib/optparse.py	[ { "content": " def __init__(self, msg):\n self.msg = msg", "metadata": "root.OptParseError.__init__", "header": "['class', 'OptParseError', '(', 'Exception', ')', ':', '___EOS___']", "index": 97 }, { "content": "class OptionError (OptParseError):\n \"\"\"\n Raised if an Option instance is created with invalid or\n inconsistent arguments.\n \"\"\"\n\n", "metadata": "root.OptionError", "header": "['module', '___EOS___']", "index": 104 }, { "content": " def __init__(self, msg, option):\n self.msg = msg\n self.option_id = str(option)", "metadata": "root.OptionError.__init__", "header": "['class', 'OptionError', '(', 'OptParseError', ')', ':', '___EOS___']", "index": 110 }, { "content": "class BadOptionError (OptParseError):\n \"\"\"\n Raised if an invalid option is seen on the command line.\n \"\"\"\n", "metadata": "root.BadOptionError", "header": "['module', '___EOS___']", "index": 131 }, { "content": " def __init__(self, opt_str):\n self.opt_str = opt_str", "metadata": "root.BadOptionError.__init__", "header": "['class', 'BadOptionError', '(', 'OptParseError', ')', ':', '___EOS___']", "index": 135 } ]	[ { "span": "class OptionError (OptParseError):", "start_line": 104, "start_column": 0, "end_line": 104, "end_column": 34 }, { "span": "class BadOptionError (OptParseError):", "start_line": 131, "start_column": 0, "end_line": 131, "end_column": 37 } ]	[ { "span": "def __init__(self, msg):", "start_line": 97, "start_column": 4, "end_line": 97, "end_column": 28 }, { "span": "def __init__(self, msg, option):", "start_line": 110, "start_column": 4, "end_line": 110, "end_column": 36 }, { "span": "def __init__(self, opt_str):", "start_line": 135, "start_column": 4, "end_line": 135, "end_column": 32 } ]	1	false	[ "[CLS]_", "Missing", "_", "call_", "to_", " _", "`_", "\\u\\u", "init\\u\\u_", "`_", "dur", "ing_", "object_", "initialization", "_", "[SEP]_", "class_", "Opt", "Pars", 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Unused import	RJT1990/pyflux/pyflux/inference/__init__.py	[ { "content": "\"\"\"\nThe module Inference holds estimation procedures.\n\"\"\"\nfrom priors import Normal, InverseGamma, Uniform\nfrom metropolis_hastings import metropolis_hastings\nfrom norm_post_sim import norm_post_sim\nfrom bbvi import BBVI\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "from priors import Normal, InverseGamma, Uniform", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 48 }, { "span": "from metropolis_hastings import metropolis_hastings", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 51 }, { "span": "from norm_post_sim import norm_post_sim", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 39 }, { "span": "from bbvi import BBVI", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 21 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\"\"\"", "\\", "10", ";", "The", " ", "module", " ", "Infer", "ence", " ", "hold", "s", " ", "estimati", "on", " ", "procedure", "s", ".", "\\", "10", ";\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "priors_", "import_", "Normal_", ",_", "Inv", "erse", "Gamma", "_", ",_", "Uniform", "_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "metro", "polis", "\\u", "hast", "ings_", "import_", "metro", "polis", "\\u", "hast", "ings_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "norm", "\\u", "post", "\\u", "sim_", "import_", "norm", "\\u", "post", "\\u", "sim_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "bb", "vi_", "import_", "BB", "VI", "_" ]	[ 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1 ]
Variable defined multiple times	tvidas/a5/scripts/bin/control.py	[ { "content": "def runInVM(m,job,VMs,adbport,vmlock,adbl,results, fcnt):\n\tname = multiprocessing.current_process().name\n\n \tformatter = logging.Formatter(fmt=LOGFORMAT,datefmt=LOGDATEFORMAT)\n \tpathForFile = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \"-run.log\"\n\tprint \"HH%sHH\" % pathForFile\n \thandler = logging.FileHandler(pathForFile, mode='w')\n \thandler.setFormatter(formatter)\n\n \tvlogger = logger.getChild(\"worker\" + name + \".vm\")\n \tvlogger.setLevel(logging.DEBUG)\n \tvlogger.addHandler(handler)\n\n\tvlogger.info(\"logging started at \" + pathForFile)\n\n\n\trval = True\n\tif VMs[m].state in [\"Reserved\"] :\n\t\twith vmlock:\n\t\t\tVMlocal = VMs[m];\n\t\t\tVMlocal.state = \"Starting\"\n\t\t\tVMs[m] = VMlocal;\n\t\t#emulator doens't observe system hosts: (must start emulator with -partition-size 128 (for example) to give room to write)\n\t\t#adb pull /etc/hosts\n\t\t#edit to 10.0.2.2 (your local machine)\n\t\t#adb remount\n\t\t#adb push hosts /etc/hosts\n\t\tt1 = time.time()\n\t\t\n\n\t\t#emulator -avd NAME -partition-size 128 -ports 5,2322 -no-window -tcpdump FILE -dns-server SERVER -http-proxy PROXY\n\t\t#TODO instead of wipe-data, would be best to re-create the VM\n\t\tEMUSTART = \"%s/emulator -avd %s -partition-size %s -port %s -no-window -tcpdump %s -wipe-data\"\n\t\t#./adb logcat\n\t\t#./adb install /storage/malware/RU.apk\n\t\t#./adb shell am broadcast -a android.intent.action.BOOT_COMPLETED\n\n\t\t#start (with specified ports)\n\t\t#emulator -ports X,Y @avd_X\n\n\t\t#wait for emulator to be fully started\n\t\t#./adb -s emulator-5584 wait-for-device\n\t\tEMUWAIT = \"%s/adb -s %s wait-for-device\"\n\n\t\tEMULOGCAT = \"%s/adb -s %s logcat\"\n\n\t\t#command\n\t\t#adb -s emualtor-X shell cmd\n\n\t\tEMUINSTALL = \"%s/adb -s %s install %s\"\n\n\t\t#<INTENT> specifications include these flags:\n\t\t# [-a <ACTION>] [-d <DATA_URI>] [-t <MIME_TYPE>]\n\t\t# [-c <CATEGORY> [-c <CATEGORY>] ...]\n\t\t# [-e\|--es <EXTRA_KEY> <EXTRA_STRING_VALUE> ...]\n\t\t# [--esn <EXTRA_KEY> ...]\n\t\t# [--ez <EXTRA_KEY> <EXTRA_BOOLEAN_VALUE> ...]\n\t\t# [-e\|--ei <EXTRA_KEY> <EXTRA_INT_VALUE> ...]\n\t\t#adb shell am broadcast -a android.intent.action.BOOT_COMPLETED -c android.intent.category.HOME -n net.fstab.checkit_android/.StartupReceiver\n\t\t#am broadcast -a android.intent.action.BOOT_COMPLETED\n\t\tEMUINTENT = \"%s/adb -s %s shell am broadcast -a %s\"\n\t\n\t\t#adb shell am start -n com.package.name/com.package.name.ActivityName\n\t\t#am start -a android.intent.action.MAIN -n com.iftitah.android.contact/com.iftitah.android.contact.Contact\n\t\t#am start -a <ACTION> -n <PACKAGE>/<PACKAGE><ACTIVITYCLASS>\n\t\tEMULAUNCH = \"%s/adb -s %s shell am start -a %s -n %s/%s\"\n\n\t\t#kill\n\t\t#could do adb shell stop\n\t\t#but why really? just going to reset for next run anyway\n\t\t# (though a stop would preserve state)\n\t\t#adb -s emulator-X emu kill\n\t\tEMUKILL = \"%s/adb -s %s emu kill\"\n\n\t\t#monkey\n\t\t#$ adb shell monkey -v -p your.package.name 100 --ignore-security-exceptions -s SEED\n\t\tEMUMONKEY = \"%s/adb -s %s shell monkey -v -p %s 100 --ignore-security-exceptions -s %s --throttle 250\"\n\n\t\t#update database with start values\n\t\tpermissions_filename = job['sha256'] + \".xml\"\n\t\timage_used = VMs[m].name\n\t\tstart_time = time.strftime(\"%Y-%m-%d-%H:%M:%S\", time.gmtime())\n\t\tmsdb.updateStartRun(job['jobuuid'],image_used,start_time,permissions_filename,MSVERSION)\n\n\t\tvlogger.info( name + \":\" + \"...starting VM \" + VMs[m].name)\n\t\t#start it\n\t\tcmd = EMUSTART % ( SDKPATH, VMs[m].name, PSIZE, str(adbport), MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256']+ \"-orig.pcap\")\n\t\tvlogger.info( name + \":\" + cmd)\n\t\tpEmu = None\n\t\ttry:\n\t\t\targs = shlex.split(cmd)\n\t\t\tpEmu = subprocess.Popen(args)\n\t\texcept:\n\t\t\tvlogger.info( name + \":\" + \"emulator start error\", sys.exc_info()[0])\n\t\t\tsys.exit(1)\n\t\t#check for start error conditions:\n\t\t#emulator: WARNING: ignoring locked SD Card image at /path/to/avd/ms-sdk003-003/sdcard.img\n\t\t#it seems too many emulator instances are running on this machine. Aborting\n\n\n\t\t#wait for it to start\n\t\tcmd = EMUWAIT % ( ADBPATH, \"emulator-\" + str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\t\tvlogger.info( name + \":\" + \"emulator wait returned: %d\" % ret )\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator wait error: %s\" % cmd )\n\t\t\tsys.exit(1)\n\t\tvlogger.info( name + \":\" + \"emulator-\" + str(adbport) + \" started\")\n\t\ttime.sleep(VM_POLL_REST * 3)\n\t\twith vmlock:\n\t\t\tVMlocal = VMs[m];\n\t\t\tVMlocal.state = \"Running\"\n\t\t\tVMs[m] = VMlocal;\n\n\t\t#start logcat\n\t\t#start it\n\t\tcmd = EMULOGCAT % ( SDKPATH, \"emulator-\" + str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\tpLogCat = None\n\t\tfLogCat = None\n\t\ttry:\n\t\t\targs = shlex.split(cmd)\n\t\t\tvlogger.info( args)\n\t\t\tfLogCat = open(MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \".logcat\",\"w\")\n\t\t\tfNull = open(\"/dev/null\")\n#TODO\t\t\tpLogCat = subprocess.Popen(args, stdin=fNull, stderr=fNull, stdout=fLogCat)\n\t\texcept:\n\t\t\tvlogger.error( name + \": \" + cmd )\n\t\t\tvlogger.error( formatExceptionInfo())\n\t\t\tvlogger.error( name + \":\" + \"emulator logcat error\", sys.exc_info()[0])\n\t\t\tsys.exit(1)\n\n\t\t#install malicious app\n\t\tcmd = EMUINSTALL % ( ADBPATH, \"emulator-\" + str(adbport), \"'\" + job['fullpath'] + \"'\")\n\t\tvlogger.info( name + \":\" + cmd)\n\t\n\t\ttry:\n\t\t\tret = subprocess.check_output([cmd], shell=True)\n\t\t\tvlogger.info( name + \":\" + \"emulator install returned: %s\" % ret )\n\t\t\tinstall_attempts = ADBTRIES\n\t\t\twhile \"Success\" not in ret and install_attempts > 0:\n\t\t\t\tkick_adb_maybe(adbl, fcnt)\n\t\t\t\tvlogger.info( name + \":\" + \"install failed emulator install returned: %s\" % ret )\n\t\t\t\ttime.sleep(VM_POLL_REST)\n\n\t\t\t\t#TODO FIXME, track down why this sometimes stalls forever, seem on SDKs 11 and 14...\n\t\t\t\tret = subprocess.check_output([cmd], shell=True)\n\t\t\t\tinstall_attempts -= 1\n\t\t\t\tif install_attempts <= 0:\n\t\t\t\t\tsyslog.syslog(VMs[m].name + \":\" + \"install failed emulator install returned: %s\" % ret )\n\t\t\t\t\tvlogger.error(VMs[m].name + \":\" + \"install failed emulator install returned: %s\" % ret )\n\t\t\t\t\n\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator install fatal error: %s\" % cmd )\n\t\t\tvlogger.error( formatExceptionInfo())\n\t\t\tsys.exit(1)\n\n\t\t#possible errors:\n\t\t#Error: Could not access the Package Manager. Is the system running?\n\n\t\ttime.sleep(VM_POLL_REST * 3)\n\n\t\t#stimulate\n\t\tdoc = etree.parse( MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \".xml\")\n\t\tpackage = doc.find('package')\n\n\t\t\n\t\tli = libIntent.libIntent(\"localhost\",adbport)\n\t\n\t\t#for each rint\n\t\tfor rint in doc.findall('rint'):\n\t\t\tvlogger.info( name + \" handling \" + str(rint.text))\n\t\t\tli.handleRIntent(str(rint.text))\n\n\t\t#for each permission (actions and rints _should_ catch all these....)\n\t\tfor perm in doc.findall('permission'):\n\t\t\tvlogger.info( name + \" handling \" + str(perm.text))\n\t\t\tli.handlePermission(str(perm.text))\n\n\t\t#for each action\n\t\tfor action in doc.findall('action'):\n\t\t\tvlogger.info( name + \" handling \" + str(action.text))\n\t\t\tli.handleAction(str(action.text))\n\t\t\t#BROADCASTS are done this way\n\t\t\t#cmd = EMUINTENT % ( ADBPATH, \"emulator-\" + str(adbport), \"android.intent.action.BOOT_COMPLETED\")\n\t\t\tcmd = EMUINTENT % ( ADBPATH, \"emulator-\" + str(adbport), str(action.text))\n\t\t\tvlogger.info( name + \":\" + cmd)\n\t\t\ttry:\n\t\t\t\t#TODO check for \"Broadcast completed\" in output, repeat if necessary\n\t\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\t\texcept:\n\t\t\t\tsyslog.syslog(\"app %s error sending intent %s\" % (job['sha256'],str(action.text)))\n\t\t\t\tvlogger.error( name + \":\" + \"emulator intent error: %s\" % cmd )\n\t\t\t\tvlogger.error( name + \":\" + \"emulator intent error: %d\" % ret )\n\t\t\t\t#TODO exit is a little too harsh here, but should probably requeue somehow\n\t\t\t\t#sys.exit(1)\n\t\t\t\t#sys.exit(1)\n\n\t\t#somethings just don't have nice rint or actions\n\t\tli.sendCall()\n\t\ttime.sleep(VM_POLL_REST)\n\t\tli.endAllCalls()\n\n\t\t#open app\n\n\n\t\t# TODO this should not be a for/for loop, the actions shoudl be paired with activities\n\t\tfor activity in doc.findall('activity'):\n\t\t\tfor action in doc.findall('action'):\n\t\t\t\tvlogger.info( name + \": \" + \"################## launching activity \" + str(activity.text))\n\t\t\t\tcmd = EMULAUNCH % ( ADBPATH, \"emulator-\" + str(adbport), str(action.text), str(package.text), str(activity.text))\n\t\t\t\tvlogger.info( name + \":\" + cmd)\n\t\t\t\ttry:\n\t\t\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\t\t\texcept:\n\t\t\t\t\tvlogger.error( name + \":\" + \"emulator launch error: %s\" % cmd )\n\t\t\t\t\tvlogger.error( name + \":\" + \"emulator launch error: %d\" % ret )\n\t\t\t\t\t#TODO exit is a little too harsh here, but should probably requeue somehow\n\t\t\t\t\t#sys.exit(1)\n\n\t\ttime.sleep(VM_POLL_REST * 5)\n\n\t\t#monkey around\n\t\tcmd = EMUMONKEY % ( ADBPATH, \"emulator-\" + str(adbport), str(package.text), random.randint(1,100))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\n\t\ttry:\n\t\t\tret = subprocess.check_output([cmd], shell=True)\n\t\t\tvlogger.info( name + \":\" + \"emulator monkey returned: %s\" % ret )\n#\t\t\tmonkey_attempts = ADBTRIES\n#\t\t\twhile \"Success\" not in ret and monkey_attempts > 0:\n#\t\t\t\tkick_adb_maybe(adbl, fcnt)\n#\t\t\t\tvlogger.info( name + \":\" + \"monkey failed emulator monkey returned: %s\" % ret )\n#\t\t\t\ttime.sleep(VM_POLL_REST)\n#\n#\t\t\t\tret = subprocess.check_output([cmd], shell=True)\n#\t\t\t\tmonkey_attempts -= 1\n#\t\t\t\tif monkey_attempts <= 0:\n#\t\t\t\t\tsyslog.syslog(VMs[m].name + \":\" + \"monkey failed emulator monkey returned: %s\" % ret )\n\t\t\t\t\n\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator monkey fatal error: %s\" % cmd )\n\t\t\tsyslog.syslog(VMs[m].name + \":\" + \"monkey failed emulator monkey error: %s\" % cmd )\n\t\t\tvlogger.error( formatExceptionInfo())\n\t\t\tsys.exit(1)\n\n\t\t#kill\n\t\tcmd = EMUKILL % ( ADBPATH, \"emulator-\" + str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator kill error\")\n\t\t\tsys.exit(1)\n\n\t\t#cleanup\n\t\tif pEmu.poll() is not None:\n\t\t\tvlogger.info( name + \": \" + \"poll is \" + str(pEmu.poll()))\n\t\t\ttry:\t\n\t\t\t\tpEmu.terminate()\n\t\t\texcept:\n\t\t\t\tvlogger.error( name + \": \" + \"pEmu term failed\")\n#TODO\t\tif pLogCat.poll() is not None:\n#TODO\t\t\tpLogCat.terminate()\n\t\tfLogCat.flush()\n\t\tfLogCat.close()\n\t\tfNull.close()\n\t\t\n\t\ttime.sleep(VM_POLL_REST)\n\t\tvlogger.info( name + \":\" + \"...stopping VM \" + VMs[m].name)\n\t\twith vmlock:\t\n\t\t\tVMlocal = VMs[m];\n\t\t\tVMlocal.state = \"Off\"\n\t\t\tVMs[m] = VMlocal;\n\t\n\t\tt2 = time.time()\t\n\n\t\tcomplete_time = time.strftime(\"%Y-%m-%d-%H:%M:%S\", time.gmtime())\n\t\tresults_file = job['sha256'] + \".pcap\"\n\t\tmsdb.updateFinishRun(job['jobuuid'],complete_time,results_file)\n\n\t\t#post process pcap, pretty crude for now, adb uses it's port and port+1; so two prunes\n\t\t#...and it seems that adb uses 5555 regardless of which even port is specified\n\t\toriginalpcap = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \"-orig.pcap\"\n\t\ttmppcap = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \"-temp.pcap\"\n\t\tfinalpcap = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \".pcap\"\n\n\t\t#cmd = \"prune_pcap.sh %s %s %s\" % (os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \"-orig.pcap\",os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \".pcap\", str(adbport))\n\t\tcmd = \"prune_pcap.sh %s %s %s\" % (originalpcap,tmppcap, str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"pcap prune error\")\n\t\t\tsys.exit(1)\n\n\t\t#cmd = \"prune_pcap.sh %s %s %s\" % (os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \"-orig.pcap\",os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \".pcap\", str(int(adbport)+1))\n\t\tcmd = \"prune_pcap.sh %s %s %s\" % (tmppcap,finalpcap, str(int(adbport)+1))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"pcap prune error\")\n\t\t\tsys.exit(1)\n\n\t\t#cmd = \"prune_pcap.sh %s %s %s\" % (os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \"-orig.pcap\",os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \".pcap\", str(5555))\n#\t\tcmd = \"prune_pcap.sh %s %s %s\" % (originalpcap,finalpcap, str(adbport))\n#\t\tvlogger.info( name + \":\" + cmd)\n#\t\ttry:\n#\t\t\tret = subprocess.check_call([cmd], shell=True)\n#\t\texcept:\n#\t\t\tvlogger.error( name + \":\" + \"pcap prune error\")\n#\t\t\tsys.exit(1)\n\n\t\t#TODO unique ip addresses\n\t\t#tshark -r <input.pcap> -T fields -e ip.dst ip.src \| sort \| uniq\n\n\n\t\tvlogger.info( name + \":\" + \"sample took %s seconds process\" % str(t2 - t1))\n\t\tresults.put(t2-t1)\n\n\telif VMs[m].state in [\"Off\"]:\n\t\tvlogger.info( name + \":\" + VMs[m].name + \"run error: found in state OFF!\")\n\t\trval = False\n\telif VMs[m].state in [\"Ready\"]:\n\t\tvlogger.info( name + \":\" + VMs[m].name + \"run error: is running and not available for new malware\")\n\t\trval = False\n\t\t#if m.name in assignments:\n\t\t#\tif assignments[m.name]['timeout'] <= time.time():\n\t\t#\t\t#do anything you want to wrap up\n\t\t#\t\tjob_post_process(m)\n\t\t#\t\tjob_cleanup(m)\n\t\t#\t\tvm_poweroff(m)\n\t\t#else: # if the machine is running but there is no job assigned to it then kill it\n\t\t#\tpcap_terminate(m)\n\t\t#\tvm_poweroff(m)\n#\telse: #not sure this is relevant...may need to remove it\n#\t\tvm_poweroff(m) #I need to get a list of states that I want to poweroff by default\n\treturn rval", "metadata": "root.runInVM", "header": "['module', '___EOS___']", "index": 221 } ]	[ { "span": "ret ", "start_line": 475, "start_column": 3, "end_line": 475, "end_column": 6 }, { "span": "ret ", "start_line": 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Unused local variable	AppScale/appscale/AppServer/lib/django-1.3/tests/regressiontests/generic_views/base.py	[ { "content": " def test_no_init_kwargs(self):\n \"\"\"\n Test that a view can't be accidentally instantiated before deployment\n \"\"\"\n try:\n view = SimpleView(key='value').as_view()\n self.fail('Should not be able to instantiate a view')\n except AttributeError:\n pass", "metadata": "root.ViewTest.test_no_init_kwargs", "header": "['class', 'ViewTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 65 }, { "content": " def test_no_init_args(self):\n \"\"\"\n Test that a view can't be accidentally instantiated before deployment\n \"\"\"\n try:\n view = SimpleView.as_view('value')\n self.fail('Should not be able to use non-keyword arguments instantiating a view')\n except TypeError:\n pass", "metadata": "root.ViewTest.test_no_init_args", "header": "['class', 'ViewTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 75 } ]	[ { "span": "view ", "start_line": 70, "start_column": 12, "end_line": 70, "end_column": 16 }, { "span": "view ", "start_line": 80, "start_column": 12, "end_line": 80, "end_column": 16 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", "View", "Test_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "no", "\\u", "init", "\\u", "kwargs_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "Test", " ", "tha", "t", " ", "a", " ", "view", " ", "can", "'", "t", " ", "be", " ", "accident", "ally", " ", "instantiate", "d", " ", "bef", "ore", " ", "deploy", "ment", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "view_", "=_", "Simple", "View_", "(_", "key_", "=_", "'", "value", "'_", ")_", "._", "as", "\\u", "view_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fail_", "(_", "'", "Sho", "ul", "d", " ", "not", " ", "be", " ", "able", " ", "to", " ", "instantiate", " ", "a", " ", "view", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "Attribute", "Error_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "View", "Test_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "no", "\\u", "init", "\\u", "args_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "Test", " ", "tha", "t", " ", "a", " ", "view", " ", "can", "'", "t", " ", "be", " ", "accident", "ally", " ", "instantiate", "d", " ", "bef", "ore", " ", "deploy", "ment", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "view_", "=_", "Simple", "View_", "._", "as", "\\u", "view_", "(_", "'", "value", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "fail_", "(_", "'", "Sho", "ul", "d", " ", "not", " ", "be", " ", "able", " ", "to", " ", "use", " ", "non", "-", "keyw", "ord", " ", "argu", "ment", "s", " ", "instant", "iati", "ng", " ", "a", " ", "view", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "Type", "Error_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Special method has incorrect signature	correl/Transmission-XBMC/resources/lib/basictypes/pythoninterfaces.py	[ { "content": "\tdef __contains__( other ):\n\t\t\"\"\"Determine whether object contains other\"\"\"", "metadata": "root.IObjectContains.__contains__", "header": "['class', 'IObjectContains', '(', 'Interface', ')', ':', '___EOS___']", "index": 19 }, { "content": "\tdef __eq__( other ):\n\t\t\"\"\"Determine whether object == other\"\"\"", "metadata": "root.IObjectEq.__eq__", "header": "['class', 'IObjectEq', '(', 'Interface', ')', ':', '___EOS___']", "index": 27 }, { "content": "\tdef __ne__( other ):\n\t\t\"\"\"Determine whether object != other\"\"\"", "metadata": "root.IObjectNe.__ne__", "header": "['class', 'IObjectNe', '(', 'Interface', ')', ':', '___EOS___']", "index": 34 }, { "content": "\tdef __getitem__( key ):\n\t\t\"\"\"Get sub-item by key or index\"\"\"", "metadata": "root.IObjectGetItem.__getitem__", "header": "['class', 'IObjectGetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 53 }, { "content": "\tdef __setitem__( key, other ):\n\t\t\"\"\"Set sub-item by key or index\"\"\"", "metadata": "root.IObjectSetItem.__setitem__", "header": "['class', 'IObjectSetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 57 }, { "content": "\tdef __delitem__( key ):\n\t\t\"\"\"Delete sub-item by key or index\"\"\"", "metadata": "root.IObjectDelItem.__delitem__", "header": "['class', 'IObjectDelItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 61 }, { "content": "\tdef __len__( ):\n\t\t\"\"\"Return the length as an integer or long\"\"\"", "metadata": "root.IObjectLength.__len__", "header": "['class', 'IObjectLength', '(', 'Interface', ')', ':', '___EOS___']", "index": 66 }, { "content": "\tdef __nonzero__( ):\n\t\t\"\"\"Determine if the object is True (not False)\"\"\"", "metadata": "root.IObjectNonZero.__nonzero__", "header": "['class', 'IObjectNonZero', '(', 'Interface', ')', ':', '___EOS___']", "index": 73 }, { "content": "\tdef __hash__( ):\n\t\t\"\"\"Return the hash as an integer\"\"\"", "metadata": "root.IObjectHash.__hash__", "header": "['class', 'IObjectHash', '(', 'Interface', ')', ':', '___EOS___']", "index": 78 }, { "content": "\tdef __iter__():\n\t\t\"\"\"Return an iterator for the items of this object\"\"\"", "metadata": "root.IObjectIter.__iter__", "header": "['class', 'IObjectIter', '(', 'Interface', ')', ':', '___EOS___']", "index": 83 }, { "content": "\tdef __getitem__( index ):\n\t\t\"\"\"Get sub-item by index\"\"\"", "metadata": "root.ISequenceGetItem.__getitem__", "header": "['class', 'ISequenceGetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 133 }, { "content": "\tdef __setitem__( index, other ):\n\t\t\"\"\"Set sub-item by index\"\"\"", "metadata": "root.ISequenceSetItem.__setitem__", "header": "['class', 'ISequenceSetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 137 }, { "content": "\tdef __delitem__( index ):\n\t\t\"\"\"Delete sub-item by index\"\"\"", "metadata": "root.ISequenceDelItem.__delitem__", "header": "['class', 'ISequenceDelItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 141 }, { "content": "\tdef __getslice__( start, stop):\n\t\t\"\"\"Get sub-items by index-range\"\"\"", "metadata": "root.ISequenceGetSlice.__getslice__", "header": "['class', 'ISequenceGetSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 146 }, { "content": "\tdef __setslice__( start, stop, other):\n\t\t\"\"\"Set sub-items by index-range\"\"\"", "metadata": "root.ISequenceSetSlice.__setslice__", "header": "['class', 'ISequenceSetSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 150 }, { "content": "\tdef __delslice__( start, stop):\n\t\t\"\"\"Delete sub-items by index-range\"\"\"", "metadata": "root.ISequenceDelSlice.__delslice__", "header": "['class', 'ISequenceDelSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 154 }, { "content": "\tdef __iter__():\n\t\t\"\"\"Return the object itself to allow for x in Iterator operation\"\"\"", "metadata": "root.IIterator.__iter__", "header": "['class', 'IIterator', '(', 'Interface', ')', ':', '___EOS___']", "index": 211 } ]	[ { "span": "def __contains__( other ):", "start_line": 19, "start_column": 1, "end_line": 19, "end_column": 27 }, { "span": "def __eq__( other ):", "start_line": 27, "start_column": 1, "end_line": 27, "end_column": 21 }, { "span": "def __ne__( other ):", "start_line": 34, "start_column": 1, "end_line": 34, "end_column": 21 }, { "span": "def __getitem__( key ):", "start_line": 53, "start_column": 1, "end_line": 53, "end_column": 24 }, { "span": "def __setitem__( key, other ):", "start_line": 57, "start_column": 1, "end_line": 57, "end_column": 31 }, { "span": "def __delitem__( key ):", "start_line": 61, "start_column": 1, "end_line": 61, "end_column": 24 }, { "span": "def __len__( ):", "start_line": 66, "start_column": 1, "end_line": 66, "end_column": 16 }, { "span": "def __nonzero__( ):", "start_line": 73, "start_column": 1, "end_line": 73, "end_column": 20 }, { "span": "def __hash__( ):", "start_line": 78, "start_column": 1, "end_line": 78, "end_column": 17 }, { "span": "def __iter__():", "start_line": 83, "start_column": 1, "end_line": 83, "end_column": 16 }, { "span": "def __getitem__( index ):", "start_line": 133, "start_column": 1, "end_line": 133, "end_column": 26 }, { "span": "def __setitem__( index, other ):", "start_line": 137, "start_column": 1, "end_line": 137, "end_column": 33 }, { "span": "def __delitem__( index ):", "start_line": 141, "start_column": 1, "end_line": 141, "end_column": 26 }, { "span": "def __getslice__( start, stop):", "start_line": 146, "start_column": 1, "end_line": 146, "end_column": 32 }, { "span": "def __setslice__( start, stop, other):", "start_line": 150, "start_column": 1, "end_line": 150, "end_column": 39 }, { "span": "def __delslice__( start, stop):", "start_line": 154, "start_column": 1, "end_line": 154, "end_column": 32 }, { "span": "def __iter__():", "start_line": 211, 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Unreachable code	natduca/quickopen/src/info_bar_gtk.py	[ { "content": "# Copyright 2011 Google Inc.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\nimport gtk\nimport pango\n\nfrom event import *\n\n\n\n\n\n\nif __name__ == \"__main__\" and False:\n w = gtk.Window()\n w.set_size_request(400,-1)\n b = InfoBarGtk()\n b.text = \"blah blah blah\"\n w.add(b)\n w.show_all()\n gtk.main()\n\nif __name__ == \"__main__\" and True:\n w = gtk.Window()\n w.set_size_request(400,-1)\n bbc = InfoBarGtkCollection()\n\n # bb1\n bb = InfoBarGtk(\"blah blah blah\")\n bbc.add_bar(bb)\n\n # bb1\n bb = InfoBarGtk(\"this is informational\")\n bb.set_stock_icon(gtk.STOCK_DIALOG_INFO)\n bbc.add_bar(bb)\n\n # bb1\n bb = InfoBarGtk(\"blah blah blah\")\n bb.add_button(\"Accept\", lambda: True)\n bbc.add_bar(bb)\n\n # bb1\n bb = InfoBarGtk(\"OMG you need to do somethnig\")\n bb.set_stock_icon(gtk.STOCK_DIALOG_WARNING)\n bb.add_button(\"Accept\", lambda: True)\n bb.add_close_button(lambda: True)\n bbc.add_bar(bb)\n\n w.add(bbc)\n w.show_all()\n gtk.main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "w = gtk.Window()", "start_line": 167, "start_column": 2, "end_line": 167, "end_column": 18 } ]	[]	1	true	[ "[CLS]_", "Unrea", "chab", "le_", "code_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "Copy", "right", " ", "2011", " ", "Goo", "gle", " ", "Inc", "._", "\\u\\u\\uNL\\u\\u\\u_", "#", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", 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Unused import	UFAL-DSG/cloud-asr/cloudasr/shared/cloudasr/schema.py	[ { "content": "import random\nimport struct\nimport datetime\nfrom flask.ext.sqlalchemy import SQLAlchemy\nfrom sqlalchemy import Column, String, Text, Integer, Float, DateTime, Boolean, ForeignKey, create_engine, types\nfrom sqlalchemy.orm import sessionmaker, relationship\nfrom sqlalchemy.ext.declarative import declarative_base\nfrom sqlalchemy.dialects.mysql.base import MSBinary\n\ndb = SQLAlchemy()\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class UUID(types.TypeDecorator):\n impl = MSBinary\n\n\n\n", "metadata": "root.UUID", "header": "['module', '___EOS___']", "index": 11 }, { "content": " def __init__(self):\n self.impl.length = 16\n types.TypeDecorator.__init__(self, length=self.impl.length)", "metadata": "root.UUID.__init__", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 14 }, { "content": " def process_bind_param(self, value, dialect=None):\n if value is not None:\n value = int(value)\n return struct.pack('>QQ', (value >> 64), value & ((1 << 64) - 1))\n else:\n return None", "metadata": "root.UUID.process_bind_param", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 18 }, { "content": " def process_result_value(self, value, dialect=None):\n if value:\n (upper, lower) = struct.unpack('>QQ', value)\n return (upper << 64) \| lower\n else:\n return None", "metadata": "root.UUID.process_result_value", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 25 }, { "content": " def is_mutable(self):\n return False", "metadata": "root.UUID.is_mutable", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 32 }, { "content": "class User(db.Model):\n __tablename__ = 'user'\n\n id = Column(UUID, primary_key = True)\n email = Column(String(128))\n name = Column(String(128))\n avatar = Column(String(128))\n transcriptions = relationship('Transcription', backref=\"user\")\n admin = Column(Boolean)\n\n\n\n", "metadata": "root.User", "header": "['module', '___EOS___']", "index": 36 }, { "content": " def is_authenticated(self):\n return True", "metadata": "root.User.is_authenticated", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 46 }, { "content": " def is_active(self):\n return True", "metadata": "root.User.is_active", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 49 }, { "content": " def is_anonymous(self):\n return False", "metadata": "root.User.is_anonymous", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 52 }, { "content": " def get_id(self):\n return unicode(self.id)", "metadata": "root.User.get_id", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 55 }, { "content": "class WorkerType(db.Model):\n __tablename__ = 'worker_type'\n\n id = Column(String(32), primary_key = True)\n lang = Column(String(10))\n name = Column(String(128))\n description = Column(Text)\n visible = Column(Boolean, default = False)\n language_models = relationship('LanguageModel')\n recordings = relationship('Recording')", "metadata": "root.WorkerType", "header": "['module', '___EOS___']", "index": 59 }, { "content": "class LanguageModel(db.Model):\n __tablename__ = 'language_model'\n\n id = Column(Integer, primary_key = True)\n key = Column(String(32))\n name = Column(String(32))\n worker_type = Column(String(32), ForeignKey('worker_type.id'))", "metadata": "root.LanguageModel", "header": "['module', '___EOS___']", "index": 70 }, { "content": "class Recording(db.Model):\n __tablename__ = 'recording'\n\n id = Column(UUID, primary_key = True)\n uuid = Column(UUID)\n part = Column(Integer)\n model = Column(String(32), ForeignKey('worker_type.id'))\n path = Column(String(128))\n url = Column(String(128))\n best_transcription = Column(Text)\n score = Column(Float)\n created = Column(DateTime, default = datetime.datetime.utcnow)\n hypotheses = relationship('Hypothesis')\n transcriptions = relationship('Transcription')", "metadata": "root.Recording", "header": "['module', '___EOS___']", "index": 78 }, { "content": "class Hypothesis(db.Model):\n __tablename__ = 'hypothesis'\n\n id = Column(Integer, primary_key = True)\n recording_id = Column(UUID, ForeignKey('recording.id'))\n text = Column(Text)\n confidence = Column(Float)", "metadata": "root.Hypothesis", "header": "['module', '___EOS___']", "index": 94 }, { "content": "class Transcription(db.Model):\n __tablename__ = 'transcription'\n\n id = Column(Integer, primary_key = True)\n recording_id = Column(UUID, ForeignKey('recording.id'))\n user_id = Column(UUID, ForeignKey('user.id'), nullable = True)\n text = Column(Text)\n created = Column(DateTime, default = datetime.datetime.utcnow)\n has_been_played = Column(Boolean)\n native_speaker = Column(Boolean)\n offensive_language = Column(Boolean)\n not_a_speech = Column(Boolean)", "metadata": "root.Transcription", "header": "['module', '___EOS___']", "index": 103 } ]	[ { "span": "import random", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 13 }, { "span": "from sqlalchemy import Column, String, Text, Integer, Float, DateTime, Boolean, ForeignKey, create_engine, types", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 112 }, { "span": "from sqlalchemy.orm import sessionmaker, relationship", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 53 }, { "span": "from sqlalchemy.ext.declarative import declarative_base", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 55 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "random_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", 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Except block handles 'BaseException'	ioam/holoviews/holoviews/core/operation.py	[ { "content": "\"\"\"\nOperations manipulate Elements, HoloMaps and Layouts, typically for\nthe purposes of analysis or visualization.\n\"\"\"\nfrom functools import reduce\nimport param\n\ntry:\n from itertools import izip as zip\nexcept:\n pass\n\nfrom .dimension import ViewableElement\nfrom .element import Element, HoloMap, GridSpace, Collator\nfrom .layout import Layout\nfrom .overlay import NdOverlay, Overlay\nfrom .spaces import DynamicMap\nfrom .traversal import unique_dimkeys\nfrom . import util\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "except:", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 7 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\"\"\"", "\\", "10", ";", "Opera", "tion", "s", " ", "manipulate", " ", "Element", "s", ",", " ", "Hol", "o", "Map", "s", " ", "and", " ", "Lay", "outs", ",", " ", "typical", "ly", " ", "for", "\\", "10", ";", "the", " ", "purpose", "s", " ", "of", " ", "analys", "is", " ", "or", " ", "visualization", ".", "\\", "10", ";\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "functools_", "import_", "reduce_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "param_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "from_", "itertools_", "import_", "izip_", "as_", "zip_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "from_", "._", "dimension_", "import_", "View", "able", "Element_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "._", "element_", "import_", "Element_", ",_", "Hol", "o", "Map_", ",_", "Grid", "Space_", ",_", "Colla", "tor_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "._", "layout_", "import_", "Layout_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "._", "overlay_", "import_", "Nd", "Overla", "y_", ",_", "Overla", "y_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "._", "spaces_", "import_", "Dynamic", "Map_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "._", "traversal", "_", "import_", "unique", "\\u", "dim", "keys_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "._", "import_", "util_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	amarandon/smeuhsocial/apps/account/forms.py	[ { "content": " def clean_username(self):\n if not alnum_re.search(self.cleaned_data[\"username\"]):\n raise forms.ValidationError(\n _(\"Usernames can only contain letters, numbers and underscores.\"))\n try:\n user = User.objects.get(\n username__iexact=self.cleaned_data[\"username\"])\n except User.DoesNotExist:\n return self.cleaned_data[\"username\"]\n raise forms.ValidationError(\n _(\"This username is already taken. Please choose another.\"))", "metadata": "root.SignupForm.clean_username", "header": "['class', 'SignupForm', '(', 'GroupForm', ')', ':', '___EOS___']", "index": 142 } ]	[ { "span": "user ", "start_line": 147, "start_column": 12, "end_line": 147, "end_column": 16 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", "Sign", "up", "Form_", "(_", "Group", "Form_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "clean", "\\u", "username_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "if_", "not_", "aln", "um", "\\u", "re_", "._", "search_", "(_", "self_", "._", "clean", "ed", "\\u", "data_", "[_", "\"", "user", "name", "\"_", "]_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "raise_", "forms_", "._", "Validat", "ion", "Error_", "(_", "\\u\\u\\uNL\\u\\u\\u_", "\\u_", "(_", "\"", "User", "names", " ", "can", " ", "only", " ", "contain", " ", "letter", "s", ",", " ", "numbers", " ", "and", " ", "underscore", "s", ".\"_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "user_", "=_", "User_", "._", "objects_", "._", "get_", "(_", "\\u\\u\\uNL\\u\\u\\u_", "user", "name", "\\u\\u", "iex", "act_", "=_", "self_", "._", "clean", "ed", "\\u", "data_", "[_", "\"", "user", "name", "\"_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "User_", "._", "Do", "es", "Not", "Exist_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "return_", "self_", "._", "clean", "ed", "\\u", "data_", "[_", "\"", "user", "name", "\"_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "raise_", "forms_", "._", "Validat", "ion", "Error_", "(_", "\\u\\u\\uNL\\u\\u\\u_", "\\u_", "(_", "\"", "Thi", "s", " ", "user", "name", " ", "is", " ", "alr", "ead", "y", " ", "take", "n", ".", " ", "Ple", "ase", " ", "choose", " ", "anot", "her", ".\"_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	sahana/eden/modules/s3db/msg.py	[ { "content": " def model(self):\n\n T = current.T\n db = current.db\n\n UNKNOWN_OPT = current.messages.UNKNOWN_OPT\n\n configure = self.configure\n define_table = self.define_table\n\n # Message priority\n msg_priority_opts = {3 : T(\"High\"),\n 2 : T(\"Medium\"),\n 1 : T(\"Low\"),\n }\n\n # ---------------------------------------------------------------------\n # Message Super Entity - all Inbound & Outbound Messages\n #\n\n message_types = Storage(msg_email = T(\"Email\"),\n msg_facebook = T(\"Facebook\"),\n msg_rss = T(\"RSS\"),\n msg_sms = T(\"SMS\"),\n msg_twitter = T(\"Twitter\"),\n msg_twitter_result = T(\"Twitter Search Results\"),\n )\n\n tablename = \"msg_message\"\n self.super_entity(tablename, \"message_id\",\n message_types,\n # Knowing which Channel Incoming Messages\n # came in on allows correlation to Outbound\n # messages (campaign_message, deployment_alert, etc)\n self.msg_channel_id(),\n s3_datetime(default=\"now\"),\n Field(\"body\", \"text\",\n label = T(\"Message\"),\n ),\n Field(\"from_address\",\n label = T(\"From\"),\n ),\n Field(\"to_address\",\n label = T(\"To\"),\n ),\n Field(\"inbound\", \"boolean\",\n default = False,\n label = T(\"Direction\"),\n represent = lambda direction: \\\n (direction and [T(\"In\")] or \\\n [T(\"Out\")])[0],\n ),\n )\n\n # @todo: make lazy_table\n table = db[tablename]\n table.instance_type.readable = True\n table.instance_type.writable = True\n\n configure(tablename,\n list_fields = [\"instance_type\",\n \"from_address\",\n \"to_address\",\n \"body\",\n \"inbound\",\n ],\n )\n\n # Reusable Field\n message_represent = S3Represent(lookup=tablename, fields=[\"body\"])\n message_id = S3ReusableField(\"message_id\", \"reference %s\" % tablename,\n ondelete = \"RESTRICT\",\n represent = message_represent,\n requires = IS_EMPTY_OR(\n IS_ONE_OF_EMPTY(db, \"msg_message.id\")),\n )\n\n self.add_components(tablename,\n msg_attachment = \"message_id\",\n deploy_response = \"message_id\",\n )\n\n # ---------------------------------------------------------------------\n # Outbound Messages\n #\n\n # Show only the supported messaging methods\n MSG_CONTACT_OPTS = current.msg.MSG_CONTACT_OPTS\n\n # Maximum number of retries to send a message\n MAX_SEND_RETRIES = current.deployment_settings.get_msg_max_send_retries()\n\n # Valid message outbox statuses\n MSG_STATUS_OPTS = {1 : T(\"Unsent\"),\n 2 : T(\"Sent\"),\n 3 : T(\"Draft\"),\n 4 : T(\"Invalid\"),\n 5 : T(\"Failed\"),\n }\n\n opt_msg_status = S3ReusableField(\"status\", \"integer\",\n notnull=True,\n requires = IS_IN_SET(MSG_STATUS_OPTS,\n zero=None),\n default = 1,\n label = T(\"Status\"),\n represent = lambda opt: \\\n MSG_STATUS_OPTS.get(opt,\n UNKNOWN_OPT))\n\n # Outbox - needs to be separate to Message since a single message\n # sent needs different outbox entries for each recipient\n tablename = \"msg_outbox\"\n define_table(tablename,\n # FK not instance\n message_id(),\n # Person/Group to send the message out to:\n self.super_link(\"pe_id\", \"pr_pentity\"),\n # If set used instead of picking up from pe_id:\n Field(\"address\"),\n Field(\"contact_method\", length=32,\n default = \"EMAIL\",\n label = T(\"Contact Method\"),\n represent = lambda opt: \\\n MSG_CONTACT_OPTS.get(opt, UNKNOWN_OPT),\n requires = IS_IN_SET(MSG_CONTACT_OPTS,\n zero=None),\n ),\n opt_msg_status(),\n # Used to loop through a PE to get it's members\n Field(\"system_generated\", \"boolean\",\n default = False,\n ),\n # Give up if we can't send after MAX_RETRIES\n Field(\"retries\", \"integer\",\n default = MAX_SEND_RETRIES,\n readable = False,\n writable = False,\n ),\n s3_meta_fields())\n\n configure(tablename,\n list_fields = [\"id\",\n \"message_id\",\n \"pe_id\",\n \"status\",\n ],\n orderby = \"msg_outbox.created_on desc\",\n )\n\n # ---------------------------------------------------------------------\n # Pass names back to global scope (s3.)\n return dict(msg_message_id = message_id,\n msg_message_represent = message_represent,\n )", "metadata": "root.S3MessageModel.model", "header": "['class', 'S3MessageModel', '(', 'S3Model', ')', ':', '___EOS___']", "index": 363 }, { "content": " def model(self):\n\n T = current.T\n db = current.db\n\n configure = self.configure\n define_table = self.define_table\n set_method = self.set_method\n\n # ---------------------------------------------------------------------\n # Twitter Channel\n #\n password_widget = S3PasswordWidget()\n tablename = \"msg_twitter_channel\"\n define_table(tablename,\n #Instance\n self.super_link(\"channel_id\", \"msg_channel\"),\n # @ToDo: Allow different Twitter accounts for different PEs (Orgs / Teams)\n #self.pr_pe_id(),\n Field(\"name\",\n label = T(\"Name\"),\n ),\n Field(\"description\",\n label = T(\"Description\"),\n ),\n Field(\"enabled\", \"boolean\",\n default = True,\n label = T(\"Enabled?\"),\n represent = s3_yes_no_represent,\n ),\n Field(\"login\", \"boolean\",\n default = False,\n label = T(\"Use for Login?\"),\n represent = s3_yes_no_represent,\n ),\n Field(\"twitter_account\",\n label = T(\"Twitter Account\"),\n ),\n # Get these from https://apps.twitter.com\n Field(\"consumer_key\", \"password\",\n label = T(\"Consumer Key\"),\n widget = password_widget,\n ),\n Field(\"consumer_secret\", \"password\",\n label = T(\"Consumer Secret\"),\n widget = password_widget,\n ),\n Field(\"access_token\", \"password\",\n label = T(\"Access Token\"),\n widget = password_widget,\n ),\n Field(\"access_token_secret\", \"password\",\n label = T(\"Access Token Secret\"),\n widget = password_widget,\n ),\n s3_meta_fields())\n\n configure(tablename,\n onaccept = self.twitter_channel_onaccept,\n #onvalidation = self.twitter_channel_onvalidation\n super_entity = \"msg_channel\",\n )\n\n set_method(\"msg\", \"twitter_channel\",\n method = \"enable\",\n action = self.msg_channel_enable_interactive)\n\n set_method(\"msg\", \"twitter_channel\",\n method = \"disable\",\n action = self.msg_channel_disable_interactive)\n\n set_method(\"msg\", \"twitter_channel\",\n method = \"poll\",\n action = self.msg_channel_poll)\n\n # ---------------------------------------------------------------------\n # Twitter Messages: InBox & Outbox\n #\n tablename = \"msg_twitter\"\n define_table(tablename,\n # Instance\n self.super_link(\"message_id\", \"msg_message\"),\n self.msg_channel_id(),\n s3_datetime(default = \"now\",\n label = T(\"Posted on\"),\n ),\n Field(\"body\", length=140,\n label = T(\"Message\"),\n ),\n Field(\"from_address\", #notnull=True,\n label = T(\"From\"),\n represent = self.twitter_represent,\n requires = IS_NOT_EMPTY(),\n ),\n Field(\"to_address\",\n label = T(\"To\"),\n represent = self.twitter_represent,\n ),\n Field(\"inbound\", \"boolean\",\n default = False,\n label = T(\"Direction\"),\n represent = lambda direction: \\\n (direction and [T(\"In\")] or \\\n [T(\"Out\")])[0],\n ),\n Field(\"msg_id\", # Twitter Message ID\n readable = False,\n writable = False,\n ),\n s3_meta_fields())\n\n configure(tablename,\n list_fields = [\"id\",\n #\"priority\",\n #\"category\",\n \"body\",\n \"from_address\",\n \"date\",\n #\"location_id\",\n ],\n #orderby = ~table.priority,\n super_entity = \"msg_message\",\n )\n\n # ---------------------------------------------------------------------\n return {}", "metadata": "root.S3TwitterModel.model", "header": "['class', 'S3TwitterModel', '(', 'S3Model', ')', ':', '___EOS___']", "index": 1710 }, { "content": " @staticmethod\n def twitter_search_poll(r, attr):\n \"\"\"\n Perform a Search of Twitter\n\n S3Method for interactive requests\n \"\"\"\n\n id = r.id\n tablename = r.tablename\n current.s3task.async(\"msg_twitter_search\", args=[id])\n current.session.confirmation = \\\n current.T(\"The search request has been submitted, so new messages should appear shortly - refresh to see them\")\n # Filter results to this Search\n redirect(URL(f=\"twitter_result\",\n vars={\"~.search_id\": id}))", "metadata": "root.S3TwitterSearchModel.twitter_search_poll", "header": "['class', 'S3TwitterSearchModel', '(', 'S3ChannelModel', ')', ':', '___EOS___']", "index": 2070 }, { "content": " @staticmethod\n def twitter_keygraph(r, attr):\n \"\"\"\n Prcoess Search Results with KeyGraph\n\n S3Method for interactive requests\n \"\"\"\n\n tablename = r.tablename\n current.s3task.async(\"msg_process_keygraph\", args=[r.id])\n current.session.confirmation = \\\n current.T(\"The search results are now being processed with KeyGraph\")\n # @ToDo: Link to KeyGraph results\n redirect(URL(f=\"twitter_result\"))", "metadata": "root.S3TwitterSearchModel.twitter_keygraph", "header": "['class', 'S3TwitterSearchModel', '(', 'S3ChannelModel', ')', ':', '___EOS___']", "index": 2088 } ]	[ { "span": "msg_priority_opts ", "start_line": 374, "start_column": 8, "end_line": 374, "end_column": 25 }, { "span": "db ", "start_line": 1713, "start_column": 8, "end_line": 1713, "end_column": 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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Variable defined multiple times	StackStorm/st2/st2reactor/st2reactor/rules/engine.py	[ { "content": " def get_matching_rules_for_trigger(self, trigger_instance):\n trigger = trigger_instance.trigger\n trigger = get_trigger_db_by_ref(trigger_instance.trigger)\n rules = Rule.query(trigger=trigger_instance.trigger, enabled=True)\n LOG.info('Found %d rules defined for trigger %s (type=%s)', len(rules), trigger['name'],\n trigger['type'])\n matcher = RulesMatcher(trigger_instance=trigger_instance,\n trigger=trigger, rules=rules)\n\n matching_rules = matcher.get_matching_rules()\n LOG.info('Matched %s rule(s) for trigger_instance %s (type=%s)', len(matching_rules),\n trigger['name'], trigger['type'])\n return matching_rules", "metadata": "root.RulesEngine.get_matching_rules_for_trigger", "header": "['class', 'RulesEngine', '(', 'object', ')', ':', '___EOS___']", "index": 35 } ]	[ { "span": "trigger ", "start_line": 36, "start_column": 8, "end_line": 36, "end_column": 15 } ]	[ { "span": "trigger ", "start_line": 37, "start_column": 8, "end_line": 37, "end_column": 15 } ]	1	true	[ "[CLS]_", "Variable_", "defined_", "multiple_", "times_", "[SEP]_", "class_", "Rule", "s", "Engine_", "(_", "object_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "get", "\\u", "matchi", "ng", "\\u", "rule", "s", "\\u", "for", "\\u", "trigger_", "(_", "self_", ",_", "trigger", "\\u", "instance_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "trigger_", "=_", "trigger", "\\u", "instance_", "._", "trigger_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "trigger_", "=_", "get", "\\u", "trigger", "\\u", "db", "\\u", "by", "\\u", "ref_", "(_", "trigger", "\\u", "instance_", "._", "trigger_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "rules_", "=_", "Rule_", "._", "query_", "(_", "trigger_", "=_", "trigger", "\\u", "instance_", "._", "trigger_", ",_", "enabled_", "=_", "True_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "LOG_", "._", "info_", "(_", "'", "Foun", "d", " ", "%", "d", " ", "rule", "s", " ", "defin", "ed", " ", "for", " ", "trigger", " ", "%", "s", " ", "(", "type", "=", "%", "s", ")'_", ",_", "len_", "(_", "rules_", ")_", ",_", "trigger_", "[_", "'", "name", "'_", "]_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "trigger_", "[_", "'", "type", "'_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "matcher_", "=_", "Rule", "s", "Matcher_", "(_", "trigger", "\\u", "instance_", "=_", "trigger", "\\u", "instance_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "trigger_", "=_", "trigger_", ",_", "rules_", "=_", "rules_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "matchi", "ng", "\\u", "rules_", "=_", "matcher_", "._", "get", "\\u", "matchi", "ng", "\\u", "rules_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "LOG_", "._", "info_", "(_", "'", "Matched", " ", "%", "s", " ", "rule", "(", "s", ")", " ", "for", " ", "trigger", "\\u", "instance", " ", "%", "s", " ", "(", "type", "=", "%", "s", ")'_", ",_", "len_", "(_", "matchi", "ng", "\\u", "rules_", ")_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "trigger_", "[_", "'", "name", "'_", "]_", ",_", "trigger_", "[_", "'", "type", "'_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "return_", "matchi", "ng", "\\u", "rules_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	ioflo/ioflo/ioflo/trim/interior/plain/test/testSimulating.py	[ { "content": "def TestSalinity():\n \"\"\" \"\"\"\n\n #clear registries\n storing.Store.Clear()\n #deeding.Deed.Clear()\n doing.Doer.Clear()\n\n store = storing.Store(name = 'Test')\n\n print(\"\\nTesting Salinity Sensor Front Simulator\")\n sim = SalinitySensorSimulator(name = 'simulatorSensorSalinity', store = store,\n group = 'simulator.sensor.salinity', output = 'ctd',\n input = 'state.position',\n parms = dict(track = 45.0, north = 0.0, east = 0.0,\n middle = 32.0, spread = 4.0, rising = True, width = 500.0))\n\n output = store.fetch('ctd').update(salinity = 32.0)\n store.expose()\n sim._expose()\n\n for k in range(1, 100):\n print(\"\")\n store.advanceStamp(0.125)\n\n input = store.fetch('state.position').update(north = k * -50.0, east = 0.0)\n sim.update()\n sim._expose()", "metadata": "root.TestSalinity", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def TestMotion():\n \"\"\"\n\n \"\"\"\n #clear registries\n storing.Store.Clear()\n #deeding.Deed.Clear()\n doing.Doer.Clear()\n\n store = storing.Store(name = 'Test')\n #CreateActions(store)\n\n\n print(\"\\nTesting Motion Sim Controller\")\n simulator = SimulatorMotionUuv(name = 'simulatorMotionTest', store = store,\n group = 'simulator.motion.test',\n speed = 'state.speed', speedRate = 'state.speedRate',\n depth = 'state.depth', depthRate = 'state.depthRate',\n pitch = 'state.pitch', pitchRate = 'state.pitchRate',\n altitude = 'state.altitude',\n heading = 'state.heading', headingRate = 'state.headingRate',\n position = 'state.position',\n rpm = 'goal.rpm', stern = 'goal.stern', rudder = 'goal.rudder',\n current = 'scenario.current', bottom = 'scenario.bottom',\n prevPosition = 'state.position',\n parms = dict(rpmLimit = 1500.0, sternLimit = 20.0, rudderLimit = 20.0,\n gs = 0.0025, gpr = -0.5, ghr = -0.5))\n\n store.expose()\n\n rpm = store.fetch('goal.rpm').update(value = 500.0)\n stern = store.fetch('goal.stern').update(value = 0.0)\n rudder = store.fetch('goal.rudder').update(value = 0.0)\n current = store.fetch('scenario.current').update(north = 0.0, east = 0.0)\n bottom = store.fetch('scenario.bottom').update(value = 50.0)\n prevPosition = store.fetch('scenario.startposition').update(north = 0.0, east = 0.0)\n\n simulator.restart()\n simulator._expose()\n store.advanceStamp(0.125)\n simulator.update()\n simulator._expose()", "metadata": "root.TestMotion", "header": "['module', '___EOS___']", "index": 33 }, { "content": "def Test():\n \"\"\"Module Common self test\n\n \"\"\"\n\n #clear registries\n print(\"\\nTesting Controllers\\n\")\n storing.Store.Clear()\n #deeding.Deed.Clear()\n doing.Doer.Clear()\n\n store = storing.Store(name = 'Test')\n store.expose()\n\n\n current = store.fetch('scenario.current').update(north = 0.0, east = 0.0)\n bottom = store.fetch('scenario.bottom').update(value = 50.0)\n prevPosition = store.fetch('state.position').update(north = 0.0, east = 0.0)\n\n headinggoal = store.fetch('goal.heading').update(value = 45.0)\n depthgoal = store.fetch('goal.depth').update(value = 5.0)\n speedgoal = store.fetch('goal.speed').update(value = 2.0)\n duration = 10.0\n\n simulatorMotionUuv.restart()\n\n controllerPidSpeed._expose()\n controllerPidHeading._expose()\n controllerPidDepth._expose()\n controllerPidPitch._expose()\n simulatorMotionUuv._expose()\n\n while (store.stamp <= duration):\n print(\"\")\n controllerPidSpeed.action()\n controllerPidHeading.action()\n controllerPidDepth.action()\n controllerPidPitch.action()\n simulatorMotionUuv.action()\n simulatorMotionUuv._expose()\n\n store.advanceStamp(0.125)", "metadata": "root.Test", "header": "['module', '___EOS___']", "index": 78 } ]	[ { "span": "output ", "start_line": 17, "start_column": 4, "end_line": 17, "end_column": 10 }, { "span": "input ", "start_line": 25, "start_column": 8, "end_line": 25, "end_column": 13 }, { "span": "rpm ", "start_line": 63, "start_column": 4, "end_line": 63, "end_column": 7 }, { "span": "stern ", "start_line": 64, "start_column": 4, "end_line": 64, "end_column": 9 }, { "span": "rudder ", "start_line": 65, "start_column": 4, "end_line": 65, "end_column": 10 }, { "span": "current ", "start_line": 66, "start_column": 4, "end_line": 66, "end_column": 11 }, { "span": "bottom ", "start_line": 67, "start_column": 4, "end_line": 67, "end_column": 10 }, { "span": "prevPosition ", "start_line": 68, "start_column": 4, "end_line": 68, "end_column": 16 }, { "span": "current ", "start_line": 93, "start_column": 4, "end_line": 93, "end_column": 11 }, { "span": "bottom ", "start_line": 94, "start_column": 4, "end_line": 94, "end_column": 10 }, { "span": "prevPosition ", "start_line": 95, "start_column": 4, "end_line": 95, "end_column": 16 }, { "span": "headinggoal ", "start_line": 97, "start_column": 4, "end_line": 97, "end_column": 15 }, { "span": "depthgoal ", "start_line": 98, "start_column": 4, "end_line": 98, "end_column": 13 }, { "span": "speedgoal ", "start_line": 99, "start_column": 4, "end_line": 99, "end_column": 13 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "def_", "Test", "Sal", "init", "y_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", "clear", " ", "registr", "ies_", "\\u\\u\\uNL\\u\\u\\u_", "stor", "ing_", "._", "Store_", "._", "Clear_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", "dee", "ding", ".", "De", "ed", ".", "Clear", "()", "_", "\\u\\u\\uNL\\u\\u\\u_", "doi", "ng_", "._", "Do", "er_", "._", "Clear_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "store_", "=_", "stor", "ing_", "._", "Store_", "(_", "name_", "=_", "'", "Test", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "print_", "(_", "\"\\\\", "n", "Test", "ing", " ", "Sal", "init", "y", " ", 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Unused import	lisa-lab/pylearn2/pylearn2/datasets/tests/test_utlc.py	[ { "content": "from __future__ import print_function\n\nimport unittest\n\nimport numpy\nimport scipy.sparse\n\nfrom pylearn2.testing.skip import skip_if_no_data\nimport pylearn2.datasets.utlc as utlc\n\n\n\n\n# @unittest.skip(\"Slow and needs >8 GB of RAM\")\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def test_ule():\n skip_if_no_data()\n # Test loading of transfer data\n train, valid, test, transfer = utlc.load_ndarray_dataset(\"ule\",\n normalize=True,\n transfer=True)\n assert train.shape[0] == transfer.shape[0]", "metadata": "root.test_ule", "header": "['module', '___EOS___']", "index": 11 }, { "content": "def test_all_utlc():\n skip_if_no_data()\n # not testing rita, because it requires a lot of memorz and is slow\n for name in ['avicenna', 'harry', 'ule']:\n print(\"Loading \", name)\n train, valid, test = utlc.load_ndarray_dataset(name, normalize=True)\n print(\"dtype, max, min, mean, std\")\n print(train.dtype, train.max(), train.min(), train.mean(), train.std())\n assert isinstance(train, numpy.ndarray)\n assert isinstance(valid, numpy.ndarray)\n assert isinstance(test, numpy.ndarray)\n assert train.shape[1] == test.shape[1] == valid.shape[1]", "metadata": "root.test_all_utlc", "header": "['module', '___EOS___']", "index": 21 }, { "content": "def test_sparse_ule():\n skip_if_no_data()\n # Test loading of transfer data\n train, valid, test, transfer = utlc.load_sparse_dataset(\"ule\",\n normalize=True,\n transfer=True)\n assert train.shape[0] == transfer.shape[0]", "metadata": "root.test_sparse_ule", "header": "['module', '___EOS___']", "index": 35 }, { "content": "def test_all_sparse_utlc():\n skip_if_no_data()\n for name in ['harry', 'terry', 'ule']:\n print(\"Loading sparse \", name)\n train, valid, test = utlc.load_sparse_dataset(name, normalize=True)\n nb_elem = numpy.prod(train.shape)\n mi = train.data.min()\n ma = train.data.max()\n mi = min(0, mi)\n ma = max(0, ma)\n su = train.data.sum()\n mean = float(su) / nb_elem\n print(name, \"dtype, max, min, mean, nb non-zero, nb element, %sparse\")\n print(train.dtype, ma, mi, mean, train.nnz, end='')\n print(nb_elem, (nb_elem - float(train.nnz)) / nb_elem)\n print(name, \"max, min, mean, std (all stats on non-zero element)\")\n print(train.data.max(), train.data.min(), end='')\n print(train.data.mean(), train.data.std())\n assert scipy.sparse.issparse(train)\n assert scipy.sparse.issparse(valid)\n assert scipy.sparse.issparse(test)\n assert train.shape[1] == test.shape[1] == valid.shape[1]", "metadata": "root.test_all_sparse_utlc", "header": "['module', '___EOS___']", "index": 44 } ]	[ { "span": "import unittest", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 15 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "\\u\\u", "future\\u\\u_", "import_", "print", "\\u", 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Unused local variable	soft-matter/pims/pims/tests/test_bioformats.py	[ { "content": " def test_getting_slice(self):\n self.check_skip()\n tmp = list(self.v[0:2])\n frame0, frame1 = tmp", "metadata": "root._image_series.test_getting_slice", "header": "['class', '_image_series', '(', '_image_single', ')', ':', '___EOS___']", "index": 72 } ]	[ { "span": "frame0,", "start_line": 75, "start_column": 8, "end_line": 75, "end_column": 14 }, { "span": "frame1 ", "start_line": 75, "start_column": 16, "end_line": 75, "end_column": 22 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", "\\u", "image", "\\u", "series_", "(_", "\\u", "image", "\\u", "single_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "getti", "ng", "\\u", "slice_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "check", "\\u", "skip_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "tmp_", "=_", "list_", "(_", "self_", "._", "v_", "[_", "0_", ":_", "2_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "frame", "0_", ",_", "frame1_", "=_", "tmp_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 0, 2, 2, 2 ]
Unused import	nigelsmall/httpstream/setup.py	[ { "content": "#!/usr/bin/env python\n# -- coding: utf-8 --\n\n# Copyright 2012-2015 Nigel Small\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\n\n\"\"\"\nHTTPStream is an HTTP client library for Python that is designed to allow\nincremental receipt and handling of web content.\n\"\"\"\n\n\ntry:\n from setuptools import setup\n from setuptools.extension import Extension\nexcept ImportError:\n from distutils.core import setup\n from distutils.extension import Extension\n\nfrom httpstream import __author__, __email__, __license__, __version__\n\n\nsetup(\n name=\"httpstream\",\n version=__version__,\n description=__doc__,\n long_description=open(\"README.rst\").read(),\n author=__author__,\n author_email=__email__,\n url=\"http://nigelsmall.com/httpstream\",\n packages=[\n \"httpstream\",\n\t\"httpstream.packages\",\n\t\"httpstream.packages.urimagic\",\n ],\n install_requires=[\n \"jsonstream>=1.0.0\",\n ],\n license=__license__,\n classifiers=[\n \"Development Status :: 5 - Production/Stable\",\n \"Intended Audience :: Developers\",\n \"License :: OSI Approved :: Apache Software License\",\n \"Operating System :: OS Independent\",\n \"Programming Language :: Python :: 2.7\",\n \"Programming Language :: Python :: 3.3\",\n \"Topic :: Internet :: WWW/HTTP\",\n \"Topic :: Software Development\",\n ],\n zip_safe=False,\n)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "from 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"\\u\\u\\uNL\\u\\u\\u_", "license_", "=_", "\\u\\u", "license\\u\\u_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "classifiers_", "=_", "[_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "Dev", "elo", "pme", "nt", " ", "Status", " ", "::", " ", "5", " ", "-", " ", "Product", "ion", "/", "Sta", "ble", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "Inten", "ded", " ", "Audi", "ence", " ", "::", " ", "Dev", "elope", "rs", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "License", " ", "::", " ", "OSI", " ", "Appro", "ved", " ", "::", " ", "Ap", "ache", " ", "Sof", "twa", "re", " ", "License", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "Opera", "ting", " ", "System", " ", "::", " ", "OS", " ", "Inde", "pend", "ent", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "Programm", "ing", " ", "Lang", "ua", "ge", " ", "::", " ", "Pyth", "on", " ", "::", " ", "2.7", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "Programm", "ing", " ", "Lang", "ua", "ge", " ", "::", " ", "Pyth", "on", " ", "::", " ", "3.3", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "Topic", " ", "::", " ", "Intern", "et", " ", "::", " ", "WW", "W", "/", "HTTP", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "\"", "Topic", " ", "::", " ", "Sof", "twa", "re", " ", "Dev", "elo", "pme", "nt", "\"_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "]_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "zip", "\\u", "safe_", "=_", "False_", ",_", "\\u\\u\\uNL\\u\\u\\u_", ")_" ]	[ 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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Except block handles 'BaseException'	pytest-dev/pytest/_pytest/unittest.py	[ { "content": " def _addexcinfo(self, rawexcinfo):\n # unwrap potential exception info (see twisted trial support below)\n rawexcinfo = getattr(rawexcinfo, '_rawexcinfo', rawexcinfo)\n try:\n excinfo = _pytest._code.ExceptionInfo(rawexcinfo)\n except TypeError:\n try:\n try:\n l = traceback.format_exception(*rawexcinfo)\n l.insert(0, \"NOTE: Incompatible Exception Representation, \"\n \"displaying natively:\\n\\n\")\n pytest.fail(\"\".join(l), pytrace=False)\n except (pytest.fail.Exception, KeyboardInterrupt):\n raise\n except:\n pytest.fail(\"ERROR: Unknown Incompatible Exception \"\n \"representation:\\n%r\" %(rawexcinfo,), pytrace=False)\n except KeyboardInterrupt:\n raise\n except pytest.fail.Exception:\n excinfo = _pytest._code.ExceptionInfo()\n self.__dict__.setdefault('_excinfo', []).append(excinfo)", "metadata": "root.TestCaseFunction._addexcinfo", "header": "['class', 'TestCaseFunction', '(', 'pytest', '.', 'Function', ')', ':', '___EOS___']", "index": 98 } ]	[ { "span": "except:", "start_line": 112, "start_column": 16, "end_line": 112, "end_column": 23 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "class_", "Test", "Case", "Function_", "(_", "pytest_", "._", "Function_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "\\u", "adde", "xc", "info_", "(_", "self_", ",_", "raw", "excinfo_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "unwrap", " ", "potenti", "al", " ", "exception", " ", "info", " ", "(", "see", " ", "twist", "ed", " ", "tria", "l", " ", "support", " ", "belo", "w", ")_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "raw", "excinfo_", "=_", "getattr_", "(_", "raw", "excinfo_", ",_", "'\\u", "raw", "exc", "info", "'_", ",_", "raw", "excinfo_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", 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"pytest_", "._", "fail_", "._", "Exception_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "excinfo_", "=_", "\\u", "pytest_", "._", "\\u", "code_", "._", "Except", "ion", "Info_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "self_", "._", "\\u\\u", "dict\\u\\u_", "._", "setdefault_", "(_", "'\\u", "exc", "info", "'_", ",_", "[_", "]_", ")_", "._", "append_", "(_", "excinfo_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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Implicit string concatenation in a list	seanthegeek/phishforall/client/search.py	[ { "content": "from os import path\ntry:\n from os import scandir, walk\nexcept ImportError:\n from scandir import scandir, walk\n\nextensions = dict(documents=[\n \"pdf\",\n \"rtf\",\n \"doc\",\n \"dot\",\n \"docx\",\n \"docm\",\n \"dotm\",\n \"docb\",\n \"xls\",\n \"xlt\",\n \"xlm\",\n \"xlsx\",\n \"xlsm\",\n \"xltx\",\n \"xltm\",\n \"xlsb\",\n \"xla\",\n \"xlam\",\n \"xll\",\n \"xlw\",\n \"ppt\",\n \"pot\",\n \"ppt\",\n \"pps\",\n \"pptx\"\n \"pptm\",\n \"potx\",\n \"potm\",\n \"ppam\",\n \"ppsx\",\n \"ppsm\",\n \"sldx\",\n \"sdm\",\n \"mpd\",\n \"mpp\",\n \"mpt\",\n \"mpc\",\n \"mpv\",\n \"mxm\",\n \"vsd\",\n \"vsdx\",\n \"odt\",\n \"ott\",\n \"odm\",\n \"oth\",\n \"ods\",\n \"ots\",\n \"odg\",\n \"otg\",\n \"cdp\",\n \"otp\",\n \"odf\",\n \"oxt\"\n], plain_text=[\n \"txt\",\n \"csv\",\n \"html\"\n], databases=[\n \"db\",\n \"odb\",\n \"sqlite\",\n \"sql\",\n \"db3\",\n \"dbf\",\n \"sdb\",\n \"ibd\",\n \"db-journal\",\n \"db3\",\n \"dbf\",\n \"myd\",\n \"rsd\",\n \"sdf\",\n \"s3db\",\n \"ade\",\n \"adp\",\n \"adn\",\n \"accdb\",\n \"accdr\",\n \"accdt\"\n \"accda\"\n \"mdb\",\n \"cdb\",\n \"mda\",\n \"mda\",\n \"mdn\",\n \"mdt\",\n \"mdw\",\n \"mdf\",\n \"mde\",\n \"accde\",\n \"mam\",\n \"maq\",\n \"mar\",\n \"mat\",\n \"maf\"\n], images=[\n \"jpg\",\n \"jpeg\",\n \"exif\",\n \"tiff\",\n \"gif\",\n \"bmp\",\n \"png\"\n \"ppm\",\n \"pgm\",\n \"pbm\",\n \"pnm\",\n \"webp\",\n \"bgp\",\n \"svg\",\n \"psd\"\n], audio=[\n \"3gp\",\n \"act\",\n \"aiff\",\n \"acc\",\n \"ape\",\n \"au\",\n \"awb\",\n \"dct\",\n \"dvf\",\n \"flac\",\n \"gsm\",\n \"iklax\",\n \"ivs\",\n \"m4a\",\n \"m4p\",\n \"mp3\",\n \"mpc\",\n \"mpc\",\n \"msv\",\n \"ogg\",\n \"oga\",\n \"opus\",\n \"ra\",\n \"rm\",\n \"sln\",\n \"vox\",\n \"wav\",\n \"wma\",\n \"wv\"\n], video=[\n \"webm\",\n \"flv\",\n \"vob\",\n \"ogv\",\n \"ogg\",\n \"drc\",\n \"gifv\",\n \"mng\",\n \"avi\",\n \"mov\",\n \"qt\",\n \"wmv\",\n \"rm\",\n \"rmvb\",\n \"asf\",\n \"mp4\",\n \"m4p\",\n \"m4v\",\n \"mpg\",\n \"mp2\",\n \"mpeg\",\n \"mpe\",\n \"mpv\",\n \"mpg\",\n \"mpeg\",\n \"m2v\",\n \"m4v\",\n \"svi\",\n \"3gp\",\n \"mxf\",\n \"nsv\",\n \"f4v\",\n \"f4p\",\n \"f4a\",\n \"f4b\"\n], archives=[\n \"zip\",\n \"rar\",\n \"ace\",\n \"7z\",\n \"tar\"\n \"gz\",\n \"bz2\",\n \"iso\",\n \"dmg\"\n],emails=[\n \"msg\",\n \"eml\",\n \"pst\"\n], p2p=[\n \"torrent\"\n], pki=[\n \"key\",\n \"csr\",\n \"pem\",\n \"p7b\"\n], exes=[\n \"exe\",\n \"com\",\n \"msi\",\n \"bat\",\n \"ps1\",\n \"sh\",\n \"pkg\"\n], cad=[\n \"hpgl\",\n \"igs\",\n \"step\",\n \"stp\",\n \"fas\",\n\n], source=[\n \"h\",\n \"c\",\n \"cpp\"\n \"java\",\n \"asp\",\n \"aspx\",\n \"vcproj\",\n \"vbw\",\n \"cs\",\n \"fs\",\n \"bat\",\n \"vbs\",\n \"csx\",\n \"ps1\",\n \"cgi\",\n \"lua\",\n \"pl\",\n \"pm\",\n \"prl\",\n \"py\",\n \"axd\",\n \"php\",\n \"php3\",\n \"json\",\n \"do\",\n \"js\",\n \"css\",\n \"html\",\n \"asm\",\n \"asi\",\n 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Except block handles 'BaseException'	OpenMDAO/OpenMDAO-Framework/openmdao.main/src/openmdao/main/assembly.py	[ { "content": " def _connect(self, src, dest):\n \"\"\"Handle one connection destination. This should only be called via\n the connect() function, never directly.\n \"\"\"\n try:\n try:\n srcexpr, destexpr = self._check_connect(src, dest)\n\n self._connections.append((srcexpr, destexpr))\n\n destval = destexpr.evaluate()\n if isinstance(destval, ndarray) and destval.size == 0:\n destexpr.set(srcexpr.evaluate(), self)\n\n self._check_dest(srcexpr, destexpr)\n\n except AttributeError as err:\n exc_type, value, traceback = sys.exc_info()\n\n invalid_vars = srcexpr.get_unresolved() + destexpr.get_unresolved()\n parts = invalid_vars[0].rsplit('.', 1)\n\n parent = repr(self.name) if self.name else 'top level assembly'\n vname = repr(parts[0])\n\n if len(parts) > 1:\n parent = repr(parts[0])\n vname = repr(parts[1])\n\n msg = \"{parent} has no variable {vname}\"\n msg = msg.format(parent=parent, vname=vname)\n\n raise exc_type, exc_type(msg), traceback\n except:\n info = sys.exc_info()\n self.reraise_exception(\"Can't connect '%s' to '%s': \" %\n (src, dest), info)\n\n self.config_changed()", "metadata": "root.Assembly._connect", "header": "['class', 'Assembly', '(', 'Component', ')', ':', '___EOS___']", "index": 595 }, { "content": " def setup_depgraph(self, dgraph=None):\n # create our depgraph\n self._depgraph = DependencyGraph()\n\n # add all of the components and their var nodes, and any of\n # our own variables as boundary var nodes.\n for name in self.list_inputs():\n self._depgraph.add_boundary_var(self, name,\n iotype='in')\n\n for name in self.list_outputs():\n self._depgraph.add_boundary_var(self, name,\n iotype='out')\n\n for cname in self.list_containers():\n obj = getattr(self, cname)\n if cname not in self._depgraph and has_interface(obj, IComponent):\n self._depgraph.add_component(cname, obj)\n\n # add our connections to the graph. Some connections, e.g.,\n # connections with unit conversions and connections involving\n # multivariable source expressions, will require the creation of\n # PseudoComponents. These must also be represented in the graph.\n for srcexpr, destexpr in self._connections:\n src = srcexpr.text\n dest = destexpr.text\n try:\n pcomp_type = self._needs_pseudo(srcexpr, destexpr)\n if pcomp_type:\n if pcomp_type == 'units':\n pseudocomp = UnitConversionPComp(self, srcexpr, destexpr,\n pseudo_type=pcomp_type)\n else:\n pseudocomp = PseudoComponent(self, srcexpr, destexpr,\n pseudo_type=pcomp_type)\n pseudocomp.activate(self)\n else:\n pseudocomp = None\n self._depgraph.check_connect(src, dest)\n dcomps = destexpr.get_referenced_compnames()\n scomps = srcexpr.get_referenced_compnames()\n for dname in dcomps:\n if dname in scomps:\n raise RuntimeError(\"Both refer to the same component.\")\n for cname in chain(dcomps, scomps):\n comp = getattr(self, cname)\n if has_interface(comp, IComponent):\n comp.config_changed(update_parent=False)\n\n for vname in chain(srcexpr.get_referenced_varpaths(copy=False),\n destexpr.get_referenced_varpaths(copy=False)):\n if not self.contains(vname):\n raise AttributeError(\"Can't find '%s'\" % vname)\n\n self._depgraph.connect(self, src, dest)\n except:\n self.reraise_exception(\"Can't connect '%s' to '%s': \" %\n (src, dest), sys.exc_info())\n\n # add connections for params, constraints, etc.\n for cname in self.list_containers():\n obj = getattr(self, cname)\n if hasattr(obj, 'get_parameters'):\n for param in obj.get_parameters().values():\n self._depgraph.add_param(obj.name, tuple(param.targets))\n\n if hasattr(obj, 'get_constraints'):\n for constraint in obj.get_constraints().values():\n constraint.activate(obj)\n\n if hasattr(obj, 'get_2sided_constraints'):\n for constraint in obj.get_2sided_constraints().values():\n constraint.activate(obj)\n\n if hasattr(obj, 'get_objectives'):\n for objective in obj.get_objectives().values():\n objective.activate(obj)\n\n if hasattr(obj, 'get_responses'):\n for res in obj.get_responses().values():\n res.activate(obj)\n\n for comp in self.get_comps():\n if has_interface(comp, IDriver) or has_interface(comp, IAssembly):\n comp.setup_depgraph(self._depgraph)", "metadata": "root.Assembly.setup_depgraph", "header": "['class', 'Assembly', '(', 'Component', ')', ':', '___EOS___']", "index": 1203 }, { "content": " def get_all_local_vars(self):\n \"\"\"Return the set of all variables in this Assembly and any\n of its children that are local to the current MPI process.\n \"\"\"\n all_locs = set()\n all_locs.update(self.list_inputs())\n all_locs.update(self.list_outputs())\n\n for s in [self._system] + list(self._system.local_subsystems(recurse=True)):\n if isinstance(s, SimpleSystem):\n try:\n obj = self.get(s.name)\n except:\n continue\n if has_interface(obj, IAssembly):\n all_locs.update(['.'.join([obj.name, n])\n for n in obj.get_all_local_vars()])\n elif has_interface(obj, IComponent):\n lvars = ['.'.join([obj.name, n])\n for n in obj.list_inputs() +\n obj.list_outputs()]\n for i, v in enumerate(lvars):\n if v in s.distrib_idxs:\n lvars[i] = (v,) # wrap in tuple to indicate its a distrib var\n all_locs.update(lvars)\n\n elif isinstance(s, ParamSystem):\n all_locs.add(s.name)\n\n return all_locs", "metadata": "root.Assembly.get_all_local_vars", "header": "['class', 'Assembly', '(', 'Component', ')', ':', '___EOS___']", "index": 1589 } ]	[ { "span": "except:", "start_line": 628, "start_column": 8, "end_line": 628, "end_column": 15 }, { "span": "except:", "start_line": 1258, "start_column": 12, "end_line": 1258, "end_column": 19 }, { "span": "except:", "start_line": 1601, "start_column": 16, "end_line": 1601, "end_column": 23 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "class_", "Asse", "mbly", "_", "(_", "Component_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "\\u", "connect_", "(_", "self_", ",_", "src_", ",_", "dest_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", 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"\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "elif_", "has", "\\u", "interface_", "(_", "obj_", ",_", "IC", "omp", "one", "nt_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", "_", "lv", "ars_", "=_", "[_", "'.'_", "._", "join_", "(_", "[_", "obj_", "._", "name_", ",_", "n_", "]_", ")_", "\\u\\u\\uNL\\u\\u\\u_", "for_", "n_", "in_", "obj_", "._", "list", "\\u", "inputs_", "(_", ")_", "+_", "\\u\\u\\uNL\\u\\u\\u_", "obj_", "._", "list", "\\u", "outputs_", "(_", ")_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "for_", "i_", ",_", "v_", "in_", "enumerate_", "(_", "lv", "ars_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", " _", "if_", "v_", "in_", "s_", "._", "distri", "b", "\\u", "idxs_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", " _", "lv", "ars_", "[_", "i_", "]_", "=_", "(_", "v_", ",_", ")_", "#", " ", "wrap", " ", "in", " ", "tuple", " ", "to", " ", "indicat", "e", " ", "its", " ", "a", " ", "distri", "b", " ", "var_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "all", "\\u", "locs_", "._", "update_", "(_", "lv", "ars_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "elif_", "isinstance_", "(_", "s_", ",_", "Param", "System_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", "_", "all", "\\u", "locs_", "._", "add_", "(_", "s_", "._", "name_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "all", "\\u", "locs_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Imprecise assert	python-beaver/python-beaver/beaver/tests/test_glob_sections.py	[ { "content": " def test_globs(self):\n files = [os.path.realpath(x) for x in glob.glob('tests/logs/0x[0-9]*.log')]\n for file in self.beaver_config.getfilepaths():\n self.assertTrue(file in files)", "metadata": "root.ConfigTests.test_globs", "header": "['class', 'ConfigTests', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 19 } ]	[ { "span": "self.assertTrue(file in files)", "start_line": 22, "start_column": 12, "end_line": 22, "end_column": 42 } ]	[]	1	true	[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Config", "Tests_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "globs_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "files_", "=_", "[_", "os_", "._", "path_", "._", "realpath_", "(_", "x_", ")_", "for_", "x_", "in_", "glob_", "._", "glob_", "(_", "'", "tests", "/", "logs", "/", "0", "x", "[", "0", "-", "9", "]*", ".", "log", "'_", ")_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "for_", "file_", "in_", "self_", "._", "bea", "ver", "\\u", "config_", "._", "getfile", "paths_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "assert", "True_", "(_", "file_", "in_", "files_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 2 ]
Imprecise assert	ffunenga/pipgh/tests/cli/test_main.py	[ { "content": " def test_init_doc(self):\n doc = pipgh.__doc__\n self.assertTrue(doc != None)\n self.assertTrue('Usage:' in doc)\n self.assertTrue('Commands:' in doc)\n self.assertTrue('Options:' in doc)\n self.assertTrue('Examples:' in doc)", "metadata": "root.TestMain.test_init_doc", "header": "['class', 'TestMain', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 9 }, { "content": " def test_cli_fails_output(self):\n # pipgh [--auth] search (...)\n # pipgh [--auth] show (...)\n # pipgh install (...)\n # pipgh [-h \| --help \| --version]\n argvs = [\n ([], pipgh.pipgh.USAGE_MESSAGE),\n ([], pipgh.__version__),\n (['-h'], pipgh.pipgh.USAGE_MESSAGE),\n (['--help'], pipgh.pipgh.USAGE_MESSAGE),\n (['-h'], pipgh.pipgh.HELP_MESSAGE.strip()),\n (['--help'], pipgh.pipgh.HELP_MESSAGE.strip()),\n (['--version'], pipgh.__version__),\n ]\n for idx, (argv, output) in enumerate(argvs):\n try:\n pipgh.main(argv, dry_run=True)\n except SystemExit as e:\n args = e.args\n else:\n _err = 'ArgvCase#%d %s failed to SystemExit' % (idx, str(argv))\n raise AssertionError(_err)\n try:\n self.assertTrue(output in args[0])\n except AssertionError as e:\n _err = 'ArgvCase#%d %s failed SystemExit\\'s output'\n e.args = (_err % (idx, str(argv)),)\n raise", "metadata": "root.TestMain.test_cli_fails_output", "header": "['class', 'TestMain', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 47 } ]	[ { "span": "self.assertTrue(doc != None)", "start_line": 11, "start_column": 8, "end_line": 11, "end_column": 36 }, { "span": "self.assertTrue('Usage:' in doc)", "start_line": 12, "start_column": 8, "end_line": 12, "end_column": 40 }, { "span": "self.assertTrue('Commands:' in doc)", "start_line": 13, "start_column": 8, "end_line": 13, "end_column": 43 }, { "span": "self.assertTrue('Options:' in doc)", "start_line": 14, "start_column": 8, "end_line": 14, "end_column": 42 }, { "span": "self.assertTrue('Examples:' in doc)", "start_line": 15, "start_column": 8, "end_line": 15, "end_column": 43 }, { "span": "self.assertTrue(output in args[0])", "start_line": 70, "start_column": 16, "end_line": 70, "end_column": 50 } ]	[]	1	true	[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Test", "Main_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "def_", "test\\u", "init", "\\u", "doc_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "doc_", "=_", "pip", "gh_", "._", "\\u\\u", "doc\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "doc_", "!=_", "None_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "Us", "age", ":'_", "in_", "doc_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "Command", "s", ":'_", "in_", "doc_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "Optio", "ns", ":'_", "in_", "doc_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "assert", "True_", "(_", "'", "Exam", "ples", ":'_", "in_", "doc_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "Test", "Main_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "cli", "\\u", "fail", "s", "\\u", "output_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "pip", "gh", " ", "[-", "-", "auth", "]", " ", "search", " ", "(...)", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "pip", "gh", " ", "[-", "-", "auth", "]", " ", "show", " ", "(...)", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "pip", "gh", " ", "install", " ", "(...)", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "pip", "gh", " ", "[-", "h", " ", "\|", " ", "--", "help", " ", "\|", " ", "--", "version", "]_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "argv", "s_", "=_", "[_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "[_", "]_", ",_", "pip", "gh_", "._", "pip", "gh_", "._", "USAGE", "\\u", "MESSAGE_", ")_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "[_", "]_", ",_", "pip", "gh_", "._", "\\u\\u", "version\\u\\u_", ")_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "[_", "'-", "h", "'_", "]_", ",_", "pip", "gh_", "._", "pip", "gh_", "._", "USAGE", "\\u", "MESSAGE_", ")_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "[_", "'--", "help", "'_", "]_", ",_", "pip", "gh_", "._", "pip", "gh_", "._", "USAGE", "\\u", "MESSAGE_", ")_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "[_", "'-", "h", "'_", "]_", ",_", "pip", "gh_", "._", "pip", "gh_", "._", "HELP", "\\u", "MESSAGE_", "._", "strip_", "(_", ")_", ")_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "(_", "[_", "'--", "help", "'_", "]_", ",_", "pip", "gh_", "._", "pip", "gh_", "._", "HELP", "\\u", "MESSAGE_", "._", "strip_", "(_", ")_", ")_", ",_", 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Unreachable code	snare/voltron/voltron/plugins/debugger/dbg_vdb.py	[ { "content": " @lock_host\n def command(self, command=None):\n \"\"\"\n Execute a command in the debugger.\n\n `command` is the command string to execute.\n \"\"\"\n if command:\n # well, this is hacky...\n # hook the canvas to capture a command's output\n oldcan = self._vdb.canvas\n newcan = envi.memcanvas.StringMemoryCanvas(self._vdb.memobj, self._vdb.symobj)\n try:\n self._vdb.canvas = newcan\n self._vdb.onecmd(command)\n finally:\n self._vdb.canvas = oldcan\n return str(newcan).rstrip(\"\\n\")\n else:\n raise Exception(\"No command specified\")\n\n return res", "metadata": "root.VDBAdaptor.command", "header": "['class', 'VDBAdaptor', '(', 'DebuggerAdaptor', ')', ':', '___EOS___']", "index": 376 } ]	[ { "span": "return res", "start_line": 397, "start_column": 12, "end_line": 397, "end_column": 22 } ]	[]	1	true	[ "[CLS]_", "Unrea", "chab", "le_", "code_", "[SEP]_", "class_", "VD", "BA", "dap", "tor_", "(_", "Debugger", "Adapt", "or_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "@_", "lock", "\\u", "host_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "def_", "command_", "(_", "self_", ",_", "command_", "=_", "None_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "Execut", "e", " ", "a", " ", "command", " ", "in", " ", "the", " ", "debugg", "er", ".", "\\", "10", ";", "\\", "10", ";", " ", " ", " ", " ", "`", "command", "`", " ", "is", " ", "the", " ", "command", " ", "string", " ", "to", " ", "execute", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "command_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "well", ",", " ", "this", " ", "is", " ", "hack", "y", "..._", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "hook", " ", "the", " ", "canv", "as", " ", "to", " ", "captur", "e", " ", "a", " ", "command", "'", "s", " ", "output_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "oldc", "an_", "=_", "self_", "._", "\\u", "vdb", "_", "._", "canvas_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "newc", "an_", "=_", "envi", "_", "._", "memc", "anv", "as_", "._", "String", "Memo", "ry", "Canvas_", "(_", "self_", "._", "\\u", "vdb", "_", "._", "memo", "bj_", ",_", "self_", "._", "\\u", "vdb", "_", "._", "sym", "obj_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", "_", "self_", "._", "\\u", "vdb", "_", "._", "canvas_", "=_", "newc", "an_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "\\u", "vdb", "_", "._", "one", "cmd_", "(_", "command_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "finally_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", "_", "self_", "._", "\\u", "vdb", "_", "._", "canvas_", "=_", "oldc", "an_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "str_", "(_", "newc", "an_", ")_", "._", "rstrip_", "(_", "\"\\\\", "n", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "raise_", "Exception_", "(_", "\"", "No", " ", "command", " ", "specified", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "res_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2 ]
Unused import	ithinksw/philo/philo/contrib/julian/migrations/0001_initial.py	[ { "content": "# encoding: utf-8\nimport datetime\nfrom south.db import db\nfrom south.v2 import SchemaMigration\nfrom django.db import models\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Migration(SchemaMigration):\n\n\n\n\n\n models = {\n 'auth.group': {\n 'Meta': {'object_name': 'Group'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'unique': 'True', 'max_length': '80'}),\n 'permissions': ('django.db.models.fields.related.ManyToManyField', [], {'to': \"orm['auth.Permission']\", 'symmetrical': 'False', 'blank': 'True'})\n },\n 'auth.permission': {\n 'Meta': {'ordering': \"('content_type__app_label', 'content_type__model', 'codename')\", 'unique_together': \"(('content_type', 'codename'),)\", 'object_name': 'Permission'},\n 'codename': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'content_type': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['contenttypes.ContentType']\"}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '50'})\n },\n 'auth.user': {\n 'Meta': {'object_name': 'User'},\n 'date_joined': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now'}),\n 'email': ('django.db.models.fields.EmailField', [], {'max_length': '75', 'blank': 'True'}),\n 'first_name': ('django.db.models.fields.CharField', [], {'max_length': '30', 'blank': 'True'}),\n 'groups': ('django.db.models.fields.related.ManyToManyField', [], {'to': \"orm['auth.Group']\", 'symmetrical': 'False', 'blank': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'is_active': ('django.db.models.fields.BooleanField', [], {'default': 'True'}),\n 'is_staff': ('django.db.models.fields.BooleanField', [], {'default': 'False'}),\n 'is_superuser': ('django.db.models.fields.BooleanField', [], {'default': 'False'}),\n 'last_login': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now'}),\n 'last_name': ('django.db.models.fields.CharField', [], {'max_length': '30', 'blank': 'True'}),\n 'password': ('django.db.models.fields.CharField', [], {'max_length': '128'}),\n 'user_permissions': ('django.db.models.fields.related.ManyToManyField', [], {'to': \"orm['auth.Permission']\", 'symmetrical': 'False', 'blank': 'True'}),\n 'username': ('django.db.models.fields.CharField', [], {'unique': 'True', 'max_length': '30'})\n },\n 'contenttypes.contenttype': {\n 'Meta': {'ordering': \"('name',)\", 'unique_together': \"(('app_label', 'model'),)\", 'object_name': 'ContentType', 'db_table': \"'django_content_type'\"},\n 'app_label': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'model': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '100'})\n },\n 'julian.calendar': {\n 'Meta': {'unique_together': \"(('name', 'site', 'language'),)\", 'object_name': 'Calendar'},\n 'description': ('django.db.models.fields.TextField', [], {'blank': 'True'}),\n 'events': ('django.db.models.fields.related.ManyToManyField', [], {'symmetrical': 'False', 'related_name': \"'calendars'\", 'blank': 'True', 'to': \"orm['julian.Event']\"}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'language': ('django.db.models.fields.CharField', [], {'default': \"'en'\", 'max_length': '5'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'site': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['sites.Site']\"}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '100', 'db_index': 'True'})\n },\n 'julian.calendarview': {\n 'Meta': {'object_name': 'CalendarView'},\n 'calendar': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['julian.Calendar']\"}),\n 'event_detail_page': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'calendar_detail_related'\", 'to': \"orm['philo.Page']\"}),\n 'events_per_page': ('django.db.models.fields.PositiveIntegerField', [], {'null': 'True', 'blank': 'True'}),\n 'feed_length': ('django.db.models.fields.PositiveIntegerField', [], {'default': '15', 'null': 'True', 'blank': 'True'}),\n 'feed_suffix': ('django.db.models.fields.CharField', [], {'default': \"'feed'\", 'max_length': '255'}),\n 'feed_type': ('django.db.models.fields.CharField', [], {'default': \"'text/calendar'\", 'max_length': '50'}),\n 'feeds_enabled': ('django.db.models.fields.BooleanField', [], {'default': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'index_page': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'calendar_index_related'\", 'to': \"orm['philo.Page']\"}),\n 'item_description_template': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'julian_calendarview_description_related'\", 'null': 'True', 'to': \"orm['philo.Template']\"}),\n 'item_title_template': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'julian_calendarview_title_related'\", 'null': 'True', 'to': \"orm['philo.Template']\"}),\n 'location_archive_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_location_archive_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'location_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_location_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'location_permalink_base': ('django.db.models.fields.CharField', [], {'default': \"'locations'\", 'max_length': '30'}),\n 'owner_archive_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_owner_archive_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'owner_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_owner_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'owner_permalink_base': ('django.db.models.fields.CharField', [], {'default': \"'owners'\", 'max_length': '30'}),\n 'tag_archive_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_tag_archive_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'tag_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_tag_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'tag_permalink_base': ('django.db.models.fields.CharField', [], {'default': \"'tags'\", 'max_length': '30'}),\n 'timespan_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_timespan_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"})\n },\n 'julian.event': {\n 'Meta': {'unique_together': \"(('site', 'created'),)\", 'object_name': 'Event'},\n 'created': ('django.db.models.fields.DateTimeField', [], {'auto_now_add': 'True', 'blank': 'True'}),\n 'description': ('philo.models.fields.TemplateField', [], {}),\n 'end_date': ('django.db.models.fields.DateField', [], {}),\n 'end_time': ('django.db.models.fields.TimeField', [], {'null': 'True', 'blank': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'last_modified': ('django.db.models.fields.DateTimeField', [], {'auto_now': 'True', 'blank': 'True'}),\n 'location_content_type': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['contenttypes.ContentType']\", 'null': 'True', 'blank': 'True'}),\n 'location_pk': ('django.db.models.fields.TextField', [], {'blank': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'owner': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'owned_events'\", 'to': \"orm['auth.User']\"}),\n 'parent_event': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['julian.Event']\", 'null': 'True', 'blank': 'True'}),\n 'site': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['sites.Site']\"}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '255', 'db_index': 'True'}),\n 'start_date': ('django.db.models.fields.DateField', [], {}),\n 'start_time': ('django.db.models.fields.TimeField', [], {'null': 'True', 'blank': 'True'}),\n 'tags': ('django.db.models.fields.related.ManyToManyField', [], {'blank': 'True', 'related_name': \"'events'\", 'null': 'True', 'symmetrical': 'False', 'to': \"orm['philo.Tag']\"})\n },\n 'julian.location': {\n 'Meta': {'object_name': 'Location'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'unique': 'True', 'max_length': '255', 'db_index': 'True'})\n },\n 'philo.attribute': {\n 'Meta': {'unique_together': \"(('key', 'entity_content_type', 'entity_object_id'), ('value_content_type', 'value_object_id'))\", 'object_name': 'Attribute'},\n 'entity_content_type': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'attribute_entity_set'\", 'to': \"orm['contenttypes.ContentType']\"}),\n 'entity_object_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'key': ('django.db.models.fields.CharField', [], {'max_length': '255', 'db_index': 'True'}),\n 'value_content_type': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'attribute_value_set'\", 'null': 'True', 'to': \"orm['contenttypes.ContentType']\"}),\n 'value_object_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True', 'null': 'True', 'blank': 'True'})\n },\n 'philo.node': {\n 'Meta': {'object_name': 'Node'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'level': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'lft': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'parent': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'children'\", 'null': 'True', 'to': \"orm['philo.Node']\"}),\n 'rght': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '255', 'db_index': 'True'}),\n 'tree_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'view_content_type': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'node_view_set'\", 'to': \"orm['contenttypes.ContentType']\"}),\n 'view_object_id': ('django.db.models.fields.PositiveIntegerField', [], {})\n },\n 'philo.page': {\n 'Meta': {'object_name': 'Page'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'template': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'pages'\", 'to': \"orm['philo.Template']\"}),\n 'title': ('django.db.models.fields.CharField', [], {'max_length': '255'})\n },\n 'philo.tag': {\n 'Meta': {'ordering': \"('name',)\", 'object_name': 'Tag'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'unique': 'True', 'max_length': '255', 'db_index': 'True'})\n },\n 'philo.template': {\n 'Meta': {'object_name': 'Template'},\n 'code': ('philo.models.fields.TemplateField', [], {}),\n 'documentation': ('django.db.models.fields.TextField', [], {'null': 'True', 'blank': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'level': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'lft': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'mimetype': ('django.db.models.fields.CharField', [], {'default': \"'text/html'\", 'max_length': '255'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'parent': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'children'\", 'null': 'True', 'to': \"orm['philo.Template']\"}),\n 'rght': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '255', 'db_index': 'True'}),\n 'tree_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'})\n },\n 'sites.site': {\n 'Meta': {'ordering': \"('domain',)\", 'object_name': 'Site', 'db_table': \"'django_site'\"},\n 'domain': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '50'}),\n 'root_node': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'sites'\", 'null': 'True', 'to': \"orm['philo.Node']\"})\n }\n }\n\n complete_apps = ['julian']", "metadata": "root.Migration", "header": "['module', '___EOS___']", "index": 6 }, { "content": " def forwards(self, orm):\n \n # Adding model 'Location'\n db.create_table('julian_location', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('name', self.gf('django.db.models.fields.CharField')(max_length=255)),\n ('slug', self.gf('django.db.models.fields.SlugField')(unique=True, max_length=255, db_index=True)),\n ))\n db.send_create_signal('julian', ['Location'])\n\n # Adding model 'Event'\n db.create_table('julian_event', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('start_date', self.gf('django.db.models.fields.DateField')()),\n ('start_time', self.gf('django.db.models.fields.TimeField')(null=True, blank=True)),\n ('end_date', self.gf('django.db.models.fields.DateField')()),\n ('end_time', self.gf('django.db.models.fields.TimeField')(null=True, blank=True)),\n ('name', self.gf('django.db.models.fields.CharField')(max_length=255)),\n ('slug', self.gf('django.db.models.fields.SlugField')(max_length=255, db_index=True)),\n ('location_content_type', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['contenttypes.ContentType'], null=True, blank=True)),\n ('location_pk', self.gf('django.db.models.fields.TextField')(blank=True)),\n ('description', self.gf('philo.models.fields.TemplateField')()),\n ('parent_event', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['julian.Event'], null=True, blank=True)),\n ('owner', self.gf('django.db.models.fields.related.ForeignKey')(related_name='owned_events', to=orm['auth.User'])),\n ('created', self.gf('django.db.models.fields.DateTimeField')(auto_now_add=True, blank=True)),\n ('last_modified', self.gf('django.db.models.fields.DateTimeField')(auto_now=True, blank=True)),\n ('site', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['sites.Site'])),\n ))\n db.send_create_signal('julian', ['Event'])\n\n # Adding unique constraint on 'Event', fields ['site', 'created']\n db.create_unique('julian_event', ['site_id', 'created'])\n\n # Adding M2M table for field tags on 'Event'\n db.create_table('julian_event_tags', (\n ('id', models.AutoField(verbose_name='ID', primary_key=True, auto_created=True)),\n ('event', models.ForeignKey(orm['julian.event'], null=False)),\n ('tag', models.ForeignKey(orm['philo.tag'], null=False))\n ))\n db.create_unique('julian_event_tags', ['event_id', 'tag_id'])\n\n # Adding model 'Calendar'\n db.create_table('julian_calendar', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('name', self.gf('django.db.models.fields.CharField')(max_length=100)),\n ('slug', self.gf('django.db.models.fields.SlugField')(max_length=100, db_index=True)),\n ('description', self.gf('django.db.models.fields.TextField')(blank=True)),\n ('site', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['sites.Site'])),\n ('language', self.gf('django.db.models.fields.CharField')(default='en', max_length=5)),\n ))\n db.send_create_signal('julian', ['Calendar'])\n\n # Adding unique constraint on 'Calendar', fields ['name', 'site', 'language']\n db.create_unique('julian_calendar', ['name', 'site_id', 'language'])\n\n # Adding M2M table for field events on 'Calendar'\n db.create_table('julian_calendar_events', (\n ('id', models.AutoField(verbose_name='ID', primary_key=True, auto_created=True)),\n ('calendar', models.ForeignKey(orm['julian.calendar'], null=False)),\n ('event', models.ForeignKey(orm['julian.event'], null=False))\n ))\n db.create_unique('julian_calendar_events', ['calendar_id', 'event_id'])\n\n # Adding model 'CalendarView'\n db.create_table('julian_calendarview', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('feed_type', self.gf('django.db.models.fields.CharField')(default='text/calendar', max_length=50)),\n ('feed_suffix', self.gf('django.db.models.fields.CharField')(default='feed', max_length=255)),\n ('feeds_enabled', self.gf('django.db.models.fields.BooleanField')(default=True)),\n ('feed_length', self.gf('django.db.models.fields.PositiveIntegerField')(default=15, null=True, blank=True)),\n ('item_title_template', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='julian_calendarview_title_related', null=True, to=orm['philo.Template'])),\n ('item_description_template', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='julian_calendarview_description_related', null=True, to=orm['philo.Template'])),\n ('calendar', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['julian.Calendar'])),\n ('index_page', self.gf('django.db.models.fields.related.ForeignKey')(related_name='calendar_index_related', to=orm['philo.Page'])),\n ('event_detail_page', self.gf('django.db.models.fields.related.ForeignKey')(related_name='calendar_detail_related', to=orm['philo.Page'])),\n ('timespan_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_timespan_related', null=True, to=orm['philo.Page'])),\n ('tag_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_tag_related', null=True, to=orm['philo.Page'])),\n ('location_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_location_related', null=True, to=orm['philo.Page'])),\n ('owner_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_owner_related', null=True, to=orm['philo.Page'])),\n ('tag_archive_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_tag_archive_related', null=True, to=orm['philo.Page'])),\n ('location_archive_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_location_archive_related', null=True, to=orm['philo.Page'])),\n ('owner_archive_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_owner_archive_related', null=True, to=orm['philo.Page'])),\n ('tag_permalink_base', self.gf('django.db.models.fields.CharField')(default='tags', max_length=30)),\n ('owner_permalink_base', self.gf('django.db.models.fields.CharField')(default='owners', max_length=30)),\n ('location_permalink_base', self.gf('django.db.models.fields.CharField')(default='locations', max_length=30)),\n ('events_per_page', self.gf('django.db.models.fields.PositiveIntegerField')(null=True, blank=True)),\n ))\n db.send_create_signal('julian', ['CalendarView'])", "metadata": "root.Migration.forwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 8 }, { "content": " def backwards(self, orm):\n \n # Removing unique constraint on 'Calendar', fields ['name', 'site', 'language']\n db.delete_unique('julian_calendar', ['name', 'site_id', 'language'])\n\n # Removing unique constraint on 'Event', fields ['site', 'created']\n db.delete_unique('julian_event', ['site_id', 'created'])\n\n # Deleting model 'Location'\n db.delete_table('julian_location')\n\n # Deleting model 'Event'\n db.delete_table('julian_event')\n\n # Removing M2M table for field tags on 'Event'\n db.delete_table('julian_event_tags')\n\n # Deleting model 'Calendar'\n db.delete_table('julian_calendar')\n\n # Removing M2M table for field events on 'Calendar'\n db.delete_table('julian_calendar_events')\n\n # Deleting model 'CalendarView'\n db.delete_table('julian_calendarview')", "metadata": "root.Migration.backwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 98 } ]	[ { "span": "import datetime", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 15 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "encoding", ":", " ", "utf", "-", "8_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "datetime_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "south_", "._", "db_", "import_", "db_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "south_", "._", "v2_", "import_", "Schema", "Migration_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "django_", "._", "db_", "import_", "models_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "class_", "Migration_", 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Unused import	pingali/dgit/dgitcore/datasets/common.py	[ { "content": "#!/usr/bin/env python\n\"\"\"\nThis is the core module for manipulating the dataset metadata\n\"\"\"\nimport os, sys, copy, fnmatch, re, shutil\nimport yaml, json, tempfile, mimetypes\nimport webbrowser, traceback, collections\nimport subprocess, string, random, pipes\nfrom collections import OrderedDict\nimport shelve, getpass\nfrom datetime import datetime\nfrom hashlib import sha256\nimport mimetypes\nimport platform\nimport uuid, shutil\nimport boto3, glob2\nimport subprocess\nfrom dateutil import parser\ntry:\n from urllib.parse import urlparse\nexcept:\n from urlparse import urlparse\nfrom ..config import get_config\nfrom ..plugins.common import plugins_get_mgr\nfrom ..helper import bcolors, clean_str, cd, compute_sha256, run, clean_name, log_repo_action \nfrom ..exceptions import \nfrom .history import get_history, get_diffs\nfrom .validation import validate\n\n#####################################################\n# Exports\n#####################################################\n\n__all__ = [\n 'lookup',\n 'list_repos',\n 'shellcmd',\n 'log', 'show', 'push', 'pull', 'commit',\n 'stash', 'drop', 'status', 'post',\n 'clone', 'init', 'diff',\n 'remote', 'delete'\n]\n\n#####################################################\n# Repo independent commands...\n#####################################################\n\n\n\n#####################################################\n# Repo specific generic commands\n#####################################################\n\n\n\n#####################################################\n# Repo specific simple commands\n#####################################################\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n#####################################################\n# Initialize a repo\n#####################################################\n\n\n\n\n\n###########################################################\n# Post metadata to a server\n###########################################################\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def lookup(username, reponame):\n \"\"\"\n Lookup a repo based on username reponame\n \"\"\"\n\n mgr = plugins_get_mgr()\n\n # XXX This should be generalized to all repo managers.\n repomgr = mgr.get(what='repomanager', name='git')\n repo = repomgr.lookup(username=username,\n reponame=reponame)\n return repo", "metadata": "root.lookup", "header": "['module', '___EOS___']", "index": 46 }, { "content": "def list_repos(remote=False):\n \"\"\"\n List repos\n\n Parameters\n ----------\n\n remote: Flag\n \"\"\"\n mgr = plugins_get_mgr()\n\n if not remote:\n repomgr = mgr.get(what='repomanager', name='git')\n repos = repomgr.get_repo_list()\n repos.sort()\n return repos\n else:\n raise Exception(\"Not supported yet\")", "metadata": "root.list_repos", "header": "['module', '___EOS___']", "index": 59 }, { "content": "@log_repo_action \ndef shellcmd(repo, args):\n \"\"\"\n Run a shell command within the repo's context\n\n Parameters\n ----------\n\n repo: Repository object\n args: Shell command\n \"\"\"\n with cd(repo.rootdir):\n result = run(args)\n return result", "metadata": "root.shellcmd", "header": "['module', '___EOS___']", "index": 82 }, { "content": "def datapackage_exists(repo):\n \"\"\"\n Check if the datapackage exists...\n \"\"\"\n datapath = os.path.join(repo.rootdir, \"datapackage.json\")\n return os.path.exists(datapath)", "metadata": "root.datapackage_exists", "header": "['module', '___EOS___']", "index": 98 }, { "content": "def generic_repo_cmd(repo, cmd, args):\n # print(\"Running generic command\", cmd, args)\n return repo.run(cmd, args)", "metadata": "root.generic_repo_cmd", "header": "['module', '___EOS___']", "index": 108 }, { "content": "@log_repo_action \ndef log(repo, args=[]):\n \"\"\"\n Log of the changes executed until now\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'log', args)", "metadata": "root.log", "header": "['module', '___EOS___']", "index": 113 }, { "content": "@log_repo_action \ndef show(repo, args=[]):\n \"\"\"\n Show commit details\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'show', args)", "metadata": "root.show", "header": "['module', '___EOS___']", "index": 126 }, { "content": "@log_repo_action \ndef remote(repo, args=[]):\n \"\"\"\n Show remote\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'remote', args)", "metadata": "root.remote", "header": "['module', '___EOS___']", "index": 139 }, { "content": "@log_repo_action \ndef push(repo, args=[]):\n \"\"\"\n Push changes to the backend\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'push', args)", "metadata": "root.push", "header": "['module', '___EOS___']", "index": 152 }, { "content": "@log_repo_action \ndef pull(repo, args=[]):\n \"\"\"\n Pull changes from the backend\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'pull', args)", "metadata": "root.pull", "header": "['module', '___EOS___']", "index": 165 }, { "content": "@log_repo_action \ndef commit(repo, args=[]):\n \"\"\"\n Commit changes to the data repository\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'commit', args)", "metadata": "root.commit", "header": "['module', '___EOS___']", "index": 178 }, { "content": "def drop(repo, args=[]):\n \"\"\"\n Drop the repository (new to dgit)\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'drop', args)", "metadata": "root.drop", "header": "['module', '___EOS___']", "index": 191 }, { "content": "@log_repo_action \ndef stash(repo, args=[]):\n \"\"\"\n Stash the changes\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'stash', args)", "metadata": "root.stash", "header": "['module', '___EOS___']", "index": 203 }, { "content": "@log_repo_action \ndef diff(repo, args=[]):\n \"\"\"\n Diff between versions\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'diff', args)", "metadata": "root.diff", "header": "['module', '___EOS___']", "index": 216 }, { "content": "@log_repo_action \ndef status(repo, args=[]):\n \"\"\"\n Show status of the repo\n\n Parameters\n ----------\n\n repo: Repository object (result of lookup)\n details: Show internal details of the repo\n args: Parameters to be passed to git status command\n\n \"\"\"\n\n result = generic_repo_cmd(repo, 'status', args)\n return result", "metadata": "root.status", "header": "['module', '___EOS___']", "index": 229 }, { "content": "@log_repo_action \ndef delete(repo, args=[]):\n \"\"\"\n Delete files\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n\n # Remove the files \n result = generic_repo_cmd(repo, 'delete', args)\n if result['status'] != 'success': \n return status \n\n with cd(repo.rootdir): \n \n package = repo.package \n resources = package['resources'] \n\n cleaned_resources = []\n for r in resources: \n relativepath = r['relativepath'] \n sha256 = r['sha256'] \n if relativepath not in ['', None]: \n if not os.path.exists(relativepath): \n # This file does not exist on disk. \n print(\"Skipping\", relativepath) \n continue \n cleaned_resources.append(r) \n \n package['resources'] = cleaned_resources \n repo.package = package \n \n with open('datapackage.json', 'w') as fd: \n fd.write(json.dumps(repo.package, indent=4))\n\n return {\n 'status': 'success',\n 'message': ''\n }", "metadata": "root.delete", "header": "['module', '___EOS___']", "index": 246 }, { "content": "def bootstrap_datapackage(repo, force=False,\n options=None, noinput=False):\n \"\"\"\n Create the datapackage file..\n \"\"\"\n\n print(\"Bootstrapping datapackage\")\n\n # get the directory\n tsprefix = datetime.now().date().isoformat()\n\n # Initial data package json\n package = OrderedDict([\n ('title', ''),\n ('description', ''),\n ('username', repo.username),\n ('reponame', repo.reponame),\n ('name', str(repo)),\n ('title', \"\"),\n ('description', \"\"),\n ('keywords', []),\n ('resources', []),\n ('creator', getpass.getuser()),\n ('createdat', datetime.now().isoformat()),\n ('remote-url', repo.remoteurl)\n ])\n\n if options is not None:\n package['title'] = options['title']\n package['description'] = options['description']\n else:\n if noinput:\n raise IncompleteParameters(\"Option field with title and description\")\n\n for var in ['title', 'description']:\n value = ''\n while value in ['',None]:\n value = input('Your Repo ' + var.title() + \": \")\n if len(value) == 0:\n print(\"{} cannot be empty. Please re-enter.\".format(var.title()))\n\n package[var] = value\n\n\n # Now store the package...\n (handle, filename) = tempfile.mkstemp()\n with open(filename, 'w') as fd:\n fd.write(json.dumps(package, indent=4))\n\n repo.package = package\n\n return filename", "metadata": "root.bootstrap_datapackage", "header": "['module', '___EOS___']", "index": 296 }, { "content": "def init(username, reponame, setup,\n force=False, options=None,\n noinput=False):\n \"\"\"\n Initialize an empty repository with datapackage.json\n\n Parameters\n ----------\n\n username: Name of the user\n reponame: Name of the repo\n setup: Specify the 'configuration' (git only, git+s3 backend etc)\n force: Force creation of the files\n options: Dictionary with content of dgit.json, if available.\n noinput: Automatic operation with no human interaction\n \"\"\"\n\n mgr = plugins_get_mgr()\n repomgr = mgr.get(what='repomanager', name='git')\n\n backendmgr = None\n if setup == 'git+s3':\n backendmgr = mgr.get(what='backend', name='s3')\n\n repo = repomgr.init(username, reponame, force, backendmgr)\n\n # Now bootstrap the datapackage.json metadata file and copy it in...\n\n # Insert a gitignore with .dgit directory in the repo. This\n # directory will be used to store partial results\n (handle, gitignore) = tempfile.mkstemp()\n with open(gitignore, 'w') as fd:\n fd.write(\".dgit\")\n\n # Try to bootstrap. If you cant, cleanup and return\n try:\n filename = bootstrap_datapackage(repo, force, options, noinput)\n except Exception as e:\n repomgr.drop(repo,[])\n os.unlink(gitignore)\n raise e\n\n repo.run('add_files',\n [\n {\n 'relativepath': 'datapackage.json',\n 'localfullpath': filename,\n },\n {\n 'relativepath': '.gitignore',\n 'localfullpath': gitignore,\n },\n ])\n\n\n # Cleanup temp files\n os.unlink(filename)\n os.unlink(gitignore)\n\n args = ['-a', '-m', 'Bootstrapped the repo']\n repo.run('commit', args)\n \n return repo", "metadata": "root.init", "header": "['module', '___EOS___']", "index": 349 }, { "content": "def clone(url):\n \"\"\"\n Clone a URL. Examples include:\n\n - [email protected]:pingali/dgit.git\n - https://github.com:pingali/dgit.git\n - s3://mybucket/git/pingali/dgit.git\n\n Parameters\n ----------\n\n url: URL of the repo\n\n \"\"\"\n backend = None\n backendmgr = None\n if url.startswith('s3'):\n backendtype = 's3'\n elif url.startswith(\"http\") or url.startswith(\"git\"):\n backendtype = 'git'\n else:\n backendtype = None\n\n mgr = plugins_get_mgr()\n repomgr = mgr.get(what='repomanager', name='git')\n backendmgr = mgr.get(what='backend', name=backendtype)\n\n # print(\"Testing {} with backend {}\".format(url, backendmgr))\n if backendmgr is not None and not backendmgr.url_is_valid(url):\n raise InvalidParameters(\"Invalid URL\")\n\n key = repomgr.clone(url, backendmgr)\n\n # Insert a datapackage if it doesnt already exist...\n repo = repomgr.lookup(key=key)\n if not datapackage_exists(repo):\n filename = bootstrap_datapackage(repo)\n repo.run('add_files',\n [\n {\n 'relativepath': 'datapackage.json',\n 'localfullpath': filename,\n },\n ])\n os.unlink(filename)\n args = ['-a', '-m', 'Bootstrapped the repo']\n repo.run('commit', args)\n\n return repo", "metadata": "root.clone", "header": "['module', '___EOS___']", "index": 413 }, { "content": "def annotate_metadata_data(repo, task, patterns=[\"\"], size=0):\n \"\"\"\n Update metadata with the content of the files\n \"\"\"\n\n mgr = plugins_get_mgr() \n keys = mgr.search('representation')['representation']\n representations = [mgr.get_by_key('representation', k) for k in keys]\n\n matching_files = repo.find_matching_files(patterns)\n package = repo.package\n rootdir = repo.rootdir\n files = package['resources']\n for f in files:\n relativepath = f['relativepath']\n if relativepath in matching_files:\n path = os.path.join(rootdir, relativepath)\n if task == 'preview':\n print(\"Adding preview for \", relativepath)\n f['content'] = open(path).read()[:size]\n elif task == 'schema':\n for r in representations: \n if r.can_process(path): \n print(\"Adding schema for \", path)\n f['schema'] = r.get_schema(path)\n break ", "metadata": "root.annotate_metadata_data", "header": "['module', '___EOS___']", "index": 469 }, { "content": "def annotate_metadata_code(repo, files):\n \"\"\"\n Update metadata with the commit information\n \"\"\"\n\n package = repo.package\n package['code'] = []\n for p in files:\n matching_files = glob2.glob(\"**/{}\".format(p))\n for f in matching_files:\n absf = os.path.abspath(f)\n print(\"Add commit data for {}\".format(f))\n package['code'].append(OrderedDict([\n ('script', f),\n ('permalink', repo.manager.permalink(repo, absf)),\n ('mimetypes', mimetypes.guess_type(absf)[0]),\n ('sha256', compute_sha256(absf))\n ]))", "metadata": "root.annotate_metadata_code", "header": "['module', '___EOS___']", "index": 496 }, { "content": "def annotate_metadata_action(repo):\n \"\"\"\n Update metadata with the action history \n \"\"\"\n package = repo.package \n\n print(\"Including history of actions\")\n with cd(repo.rootdir): \n filename = \".dgit/log.json\" \n if os.path.exists(filename): \n history = open(filename).readlines() \n actions = []\n for a in history: \n try: \n a = json.loads(a)\n for x in ['code']: \n if x not in a or a[x] == None: \n a[x] = \"...\"\n actions.append(a)\n except:\n pass \n package['actions'] = actions", "metadata": "root.annotate_metadata_action", "header": "['module', '___EOS___']", "index": 516 }, { "content": "def annotate_metadata_platform(repo):\n \"\"\"\n Update metadata host information\n \"\"\"\n\n print(\"Added platform information\")\n package = repo.package\n mgr = plugins_get_mgr()\n repomgr = mgr.get(what='instrumentation', name='platform')\n package['platform'] = repomgr.get_metadata()", "metadata": "root.annotate_metadata_platform", "header": "['module', '___EOS___']", "index": 539 }, { "content": "def annotate_metadata_diffs(repo):\n\n print(\"Computing schema changes\")\n with cd(repo.rootdir):\n get_diffs(repo.package['history'])", "metadata": "root.annotate_metadata_diffs", "header": "['module', '___EOS___']", "index": 550 }, { "content": "def annotate_metadata_validation(repo):\n\n print(\"Adding validation information\")\n # Collect the validation results by relativepath\n results = validate(repo)\n fileresults = {}\n for r in results:\n filename = r['target']\n if filename not in fileresults:\n fileresults[filename] = []\n fileresults[filename].append(r)\n\n for r in repo.package['resources']:\n path = r['relativepath']\n if path in fileresults:\n r['validation'] = fileresults[path]", "metadata": "root.annotate_metadata_validation", "header": "['module', '___EOS___']", "index": 556 }, { "content": "def annotate_metadata_dependencies(repo):\n \"\"\"\n Collect information from the dependent repo's\n \"\"\"\n\n options = repo.options\n\n if 'dependencies' not in options:\n print(\"No dependencies\")\n return []\n\n repos = []\n dependent_repos = options['dependencies']\n for d in dependent_repos:\n if \"/\" not in d:\n print(\"Invalid dependency specification\")\n (username, reponame) = d.split(\"/\")\n try:\n repos.append(repo.manager.lookup(username, reponame))\n except:\n print(\"Repository does not exist. Please create one\", d)\n\n package = repo.package\n package['dependencies'] = []\n for r in repos:\n package['dependencies'].append({\n 'username': r.username,\n 'reponame': r.reponame,\n })", "metadata": "root.annotate_metadata_dependencies", "header": "['module', '___EOS___']", "index": 573 }, { "content": "def post(repo, args=[]):\n \"\"\"\n Post to metadata server\n\n Parameters\n ----------\n\n repo: Repository object (result of lookup)\n \"\"\"\n\n mgr = plugins_get_mgr()\n keys = mgr.search(what='metadata')\n keys = keys['metadata']\n\n if len(keys) == 0:\n return\n\n # Incorporate pipeline information...\n if 'pipeline' in repo.options:\n for name, details in repo.options['pipeline'].items():\n patterns = details['files']\n matching_files = repo.find_matching_files(patterns)\n matching_files.sort()\n details['files'] = matching_files\n for i, f in enumerate(matching_files):\n r = repo.get_resource(f)\n if 'pipeline' not in r:\n r['pipeline'] = []\n r['pipeline'].append(name + \" [Step {}]\".format(i))\n\n if 'metadata-management' in repo.options:\n\n print(\"Collecting all the required metadata to post\")\n metadata = repo.options['metadata-management']\n\n # Add data repo history\n if 'include-data-history' in metadata and metadata['include-data-history']:\n repo.package['history'] = get_history(repo.rootdir)\n\n # Add action history \n if 'include-action-history' in metadata and metadata['include-action-history']:\n annotate_metadata_action(repo) \n\n # Add data repo history\n if 'include-preview' in metadata:\n annotate_metadata_data(repo,\n task='preview',\n patterns=metadata['include-preview']['files'],\n size=metadata['include-preview']['length'])\n\n if (('include-schema' in metadata) and metadata['include-schema']):\n annotate_metadata_data(repo, task='schema')\n\n if 'include-code-history' in metadata:\n annotate_metadata_code(repo, files=metadata['include-code-history'])\n\n if 'include-platform' in metadata:\n annotate_metadata_platform(repo)\n\n if 'include-validation' in metadata:\n annotate_metadata_validation(repo)\n\n if 'include-dependencies' in metadata:\n annotate_metadata_dependencies(repo)\n\n history = repo.package.get('history',None)\n if (('include-tab-diffs' in metadata) and\n metadata['include-tab-diffs'] and\n history is not None):\n annotate_metadata_diffs(repo)\n\n # Insert options as well\n repo.package['config'] = repo.options\n\n try:\n for k in keys:\n # print(\"Key\", k)\n metadatamgr = mgr.get_by_key('metadata', k)\n url = metadatamgr.url\n o = urlparse(url)\n print(\"Posting to \", o.netloc)\n response = metadatamgr.post(repo)\n if isinstance(response, str):\n print(\"Error while posting:\", response)\n elif response.status_code in [400]:\n content = response.json()\n print(\"Error while posting:\")\n for k in content:\n print(\" \", k,\"- \", \",\".join(content[k]))\n except NetworkError as e:\n print(\"Unable to reach metadata server!\")\n except NetworkInvalidConfiguration as e:\n print(\"Invalid network configuration in the INI file\")\n print(e.message)\n except Exception as e:\n print(\"Could not post. Unknown error\")\n print(e)", "metadata": "root.post", "header": "['module', '___EOS___']", "index": 603 } ]	[ { "span": "import os, sys, copy, fnmatch, re, shutil", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 41 }, { "span": "import yaml, json, tempfile, mimetypes", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 38 }, { "span": "import webbrowser, traceback, collections", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 41 }, { "span": "import subprocess, string, random, pipes", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 40 }, { "span": "import shelve, getpass", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 22 }, { "span": "import platform", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 15 }, { "span": "import uuid, shutil", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 19 }, { "span": "import boto3, glob2", "start_line": 15, "start_column": 0, "end_line": 15, "end_column": 19 }, { "span": "import subprocess", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 17 }, { "span": "from dateutil import parser", "start_line": 17, "start_column": 0, "end_line": 17, "end_column": 27 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#!", "/", "usr", "/", "bin", "/", "env", " ", "python_", "\\u\\u\\uNL\\u\\u\\u_", "\"\"\"", "\\", "10", ";", "Thi", "s", " ", "is", " ", "the", " ", "core", " ", "module", " ", "for", " ", "manipulati", "ng", " ", "the", " ", "dataset", " ", "metadata", "\\", "10", ";\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "os_", ",_", "sys_", ",_", "copy_", ",_", "fnmatch_", ",_", "re_", ",_", "shutil_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "yaml_", ",_", "json_", ",_", "tempfile_", ",_", "mimetypes_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "webbrowser_", ",_", "traceback_", ",_", "collections_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", 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Unused import	chrisdev/wagtail-cookiecutter-foundation/{{cookiecutter.repo_name}}/products/models.py	[ { "content": "from django.db import models\nfrom django.core.paginator import Paginator, EmptyPage, PageNotAnInteger\n\nfrom wagtail.wagtailcore.models import Page, Orderable\nfrom wagtail.wagtailcore.fields import RichTextField\nfrom wagtail.wagtailimages.edit_handlers import ImageChooserPanel\nfrom wagtail.wagtailimages.models import Image\n\n\nfrom wagtail.wagtailadmin.edit_handlers import (\n FieldPanel, MultiFieldPanel, InlinePanel\n)\nfrom wagtail.wagtailsearch import index\nfrom wagtail.wagtailsnippets.models import register_snippet\nfrom wagtail.wagtailsnippets.edit_handlers import SnippetChooserPanel\n\nfrom modelcluster.fields import ParentalKey\nfrom modelcluster.tags import ClusterTaggableManager\nfrom taggit.models import Tag, TaggedItemBase\nfrom utils.models import LinkFields, RelatedLink, CarouselItem\n\n\n# Product page\n\n\n\nProductIndexPage.content_panels = [\n FieldPanel('title', classname=\"full title\"),\n FieldPanel('subtitle'),\n FieldPanel('intro', classname=\"full\"),\n InlinePanel('related_links', label=\"Related links\"),\n]\n\n\n\n\n\n\n\nProductPage.content_panels = [\n FieldPanel('title', classname=\"title\"),\n FieldPanel('price', classname=\"full\"),\n FieldPanel('description', classname=\"full\"),\n ImageChooserPanel('image'),\n FieldPanel('tags'),\n InlinePanel('related_links', label=\"Related links\"),\n]\n\nProductPage.promote_panels = [\n MultiFieldPanel(Page.promote_panels, \"Common page configuration\"),\n ImageChooserPanel('feed_image'),\n]", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class ProductIndexPageRelatedLink(Orderable, RelatedLink):\n page = ParentalKey('products.ProductIndexPage', related_name='related_links')", "metadata": "root.ProductIndexPageRelatedLink", "header": "['module', '___EOS___']", "index": 23 }, { "content": "class ProductIndexPage(Page):\n subtitle = models.CharField(max_length=255, blank=True)\n intro = RichTextField(blank=True)\n\n indexed_fields = ('intro', )\n\n\n", "metadata": "root.ProductIndexPage", "header": "['module', '___EOS___']", "index": 27 }, { "content": " @property\n def products(self):\n # Get list of live blog pages that are descendants of this page\n products = ProductPage.objects.live().descendant_of(self)\n\n return products", "metadata": "root.ProductIndexPage.products", "header": "['class', 'ProductIndexPage', '(', 'Page', ')', ':', '___EOS___']", "index": 33 }, { "content": " @property\n def tag_list(self):\n tag_ids = ProductPageTag.objects.all().values_list('tag_id', flat=True)\n return Tag.objects.filter(pk__in=tag_ids)", "metadata": "root.ProductIndexPage.tag_list", "header": "['class', 'ProductIndexPage', '(', 'Page', ')', ':', '___EOS___']", "index": 40 }, { "content": " def get_context(self, request):\n # Get products\n products = self.products\n # Filter by tag\n tag = request.GET.get('tag')\n if tag:\n products = products.filter(tags__name=tag)\n\n # Pagination\n page = request.GET.get('page')\n paginator = Paginator(products, 12) # Show 10 products per page\n try:\n products = paginator.page(page)\n except PageNotAnInteger:\n products = paginator.page(1)\n except EmptyPage:\n products = paginator.page(paginator.num_pages)\n\n # Update template context\n context = super(ProductIndexPage, self).get_context(request)\n context['products'] = products\n return context", "metadata": "root.ProductIndexPage.get_context", "header": "['class', 'ProductIndexPage', '(', 'Page', ')', ':', '___EOS___']", "index": 45 }, { "content": "class ProductPageRelatedLink(Orderable, RelatedLink):\n page = ParentalKey('products.ProductPage', related_name='related_links')", "metadata": "root.ProductPageRelatedLink", "header": "['module', '___EOS___']", "index": 76 }, { "content": "class ProductPageTag(TaggedItemBase):\n content_object = ParentalKey(\n 'products.ProductPage', related_name='tagged_items'\n )\n ", "metadata": "root.ProductPageTag", "header": "['module', '___EOS___']", "index": 80 }, { "content": " def __unicode__(self):\n return self.name", "metadata": "root.ProductPageTag.__unicode__", "header": "['class', 'ProductPageTag', '(', 'TaggedItemBase', ')', ':', '___EOS___']", "index": 85 }, { "content": "class ProductPage(Page):\n price = models.CharField(max_length=255, blank=True)\n description = RichTextField(blank=True)\n tags = ClusterTaggableManager(through=ProductPageTag, blank=True)\n image = models.ForeignKey(\n Image,\n null=True,\n blank=True,\n on_delete=models.SET_NULL,\n related_name='+'\n )\n feed_image = models.ForeignKey(\n Image,\n null=True,\n blank=True,\n on_delete=models.SET_NULL,\n related_name='+'\n )\n\n indexed_fields = ('title', 'intro', 'biography')", "metadata": "root.ProductPage", "header": "['module', '___EOS___']", "index": 89 } ]	[ { "span": "from wagtail.wagtailsearch import index", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 39 }, { "span": "from wagtail.wagtailsnippets.models import register_snippet", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 59 }, { "span": "from wagtail.wagtailsnippets.edit_handlers import SnippetChooserPanel", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 69 }, { "span": "from utils.models import LinkFields, RelatedLink, CarouselItem", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 62 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "django_", "._", "db_", "import_", "models_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "django_", "._", "core_", "._", "paginator_", "import_", "Paginator_", ",_", "Emp", "ty", "Page_", ",_", "Page", "Not", "An", "Integer_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "wagtail_", "._", "wagtailcore_", "._", "models_", "import_", "Page_", ",_", "Order", "able_", 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Unused import	Microsoft/ApplicationInsights-Python/applicationinsights/channel/contracts/Application.py	[ { "content": "import collections\nimport copy\nfrom .Utils import _write_complex_object\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Application(object):\n \"\"\"Data contract class for type Application.\n \"\"\"\n _defaults = collections.OrderedDict([\n ('ai.application.ver', None)\n ])\n \n \n \n \n ", "metadata": "root.Application", "header": "['module', '___EOS___']", "index": 4 }, { "content": " def __init__(self):\n \"\"\"Initializes a new instance of the class.\n \"\"\"\n self._values = {\n }\n self._initialize()", "metadata": "root.Application.__init__", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 11 }, { "content": " @property\n def ver(self):\n \"\"\"The ver property.\n \n Returns:\n (string). the property value. (defaults to: None)\n \"\"\"\n if 'ai.application.ver' in self._values:\n return self._values['ai.application.ver']\n return self._defaults['ai.application.ver']", "metadata": "root.Application.ver", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 18 }, { "content": " @ver.setter\n def ver(self, value):\n \"\"\"The ver property.\n \n Args:\n value (string). the property value.\n \"\"\"\n if value == self._defaults['ai.application.ver'] and 'ai.application.ver' in self._values:\n del self._values['ai.application.ver']\n else:\n self._values['ai.application.ver'] = value", "metadata": "root.Application.ver", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 29 }, { "content": " def _initialize(self):\n \"\"\"Initializes the current instance of the object.\n \"\"\"\n pass", "metadata": "root.Application._initialize", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 41 }, { "content": " def write(self):\n \"\"\"Writes the contents of this object and returns the content as a dict object.\n \n Returns:\n (dict). the object that represents the same data as the current instance.\n \"\"\"\n return _write_complex_object(self._defaults, self._values)", "metadata": "root.Application.write", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 46 } ]	[ { "span": "import copy", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 11 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "collections_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "copy_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "._", "Utils_", "import_", "\\u", "write", "\\u", "complex", "\\u", "object_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "class_", 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":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "\\u", "initialize_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "Initializ", "es", " ", "the", " ", "current", " ", "instance", " ", "of", " ", "the", " ", "object", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "Application_", "(_", "object_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "write_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "Write", "s", " ", "the", " ", "content", "s", " ", "of", " ", "this", " ", "object", " ", "and", " ", "return", "s", " ", "the", " ", "content", " ", "as", " ", "a", " ", "dict", " ", "object", ".", "\\", "10", ";", " ", " ", " ", " ", "\\", "10", ";", " ", " ", " ", " ", "Return", "s", ":", "\\", "10", ";", " ", " ", " ", " ", "(", "dict", ").", " ", "the", " ", "object", " ", "tha", "t", " ", "represent", "s", " ", "the", " ", "same", " ", "data", " ", "as", " ", "the", " ", "current", " ", "instance", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "return_", "\\u", "write", "\\u", "complex", "\\u", "object_", "(_", "self_", "._", "\\u", "defaults_", ",_", "self_", "._", "\\u", "values_", ")_" ]	[ 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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Unused import	xraypy/xraylarch/win32/setup_freeze.py	[ { "content": "\"\"\"\nsetup.py script for cx_Freeze\n\nUsage:\n python setup_freeze.py bdist_mac --iconfile=GSEMap.icns\n\nthen use disk utility to make a .dmg\n\"\"\"\n\nfrom cx_Freeze import setup, Executable\n\nimport os, sys\nimport wx\nimport wx.lib.agw.flatnotebook\nimport numpy, scipy, matplotlib\nmatplotlib.use('WXAgg')\nimport sqlalchemy\n\nfrom scipy.sparse.csgraph import _validation\nfrom scipy.io import netcdf\nnetcdf_open = netcdf.netcdf_file\n\nimport wxmplot\nfrom wxmplot.plotframe import PlotFrame\nimport larch\n\nimport Image\nimport epics\nimport Carbon\n\nlibca = epics.ca.initialize_libca()\nmpl_data_files = matplotlib.get_py2exe_datafiles()\n\nresource_files = ['../COPYING']\n## also: use\n## if getattr(sys, 'frozen', None) == 'macosx_app':\n## in lib/site_config.py to specify plugin path\n\nplugin_files = []\npsrc = \"/usr/share/larch\"\nfor dname in os.listdir('%s/plugins' % psrc):\n pname = '%s/plugins/%s' % (psrc, dname)\n if os.path.isdir(pname):\n flist = ['%s/%s' % (pname, f) for f in os.listdir(pname) if not f.endswith('.pyc')]\n plugin_files.append((\"larch/plugins/%s\" % dname, flist))\n\n\ndll_files = [(\"larch/dlls/darwin/\",\n ['%s/dlls/darwin/%s' % (psrc, f) for f in os.listdir('%s/dlls/darwin' % psrc)]\n )]\n\nDATA_FILES = []\n\nexe_opts = {# 'packages': ['wx', 'numpy','sqlalchemy'],\n 'includes': ['Carbon', 'Carbon.Appearance', 'ConfigParser',\n 'Image', 'ctypes', 'epics', 'epics.devices',\n 'fpformat', 'h5py', 'h5py._objects',\n 'h5py._proxy', 'h5py.defs', 'h5py.utils',\n 'matplotlib', 'numpy', 'scipy',\n 'scipy.constants', 'scipy.fftpack',\n 'scipy.io.matlab.mio5_utils',\n 'scipy.io.matlab.streams', 'scipy.io.netcdf',\n 'scipy.optimize', 'scipy.signal',\n 'skimage', 'skimage.exposure', 'wxutils',\n 'scipy.sparse.csgraph._validation', 'sqlalchemy',\n 'sqlalchemy.dialects.sqlite', 'sqlalchemy.orm',\n 'sqlalchemy.pool', 'sqlite3', 'wx', 'wx._core',\n 'wx.lib', 'wx.lib.agw', 'wx.lib.agw.flatnotebook',\n 'wx.lib.colourselect', 'wx.lib.masked',\n 'wx.lib.mixins', 'wx.lib.mixins.inspection',\n 'wx.lib.agw.pycollapsiblepane',\n 'wx.lib.newevent', 'wx.py', 'wxmplot', 'wxversion',\n 'xdrlib', 'xml.etree', 'xml.etree.cElementTree'],\n 'excludes': ['Tkinter', '_tkinter', 'Tkconstants', 'tcl',\n '_imagingtk', 'PIL._imagingtk', 'ImageTk',\n 'PIL.ImageTk', 'FixTk''_gtkagg', '_tkagg',\n 'matplotlib.tests',\n 'qt', 'PyQt4Gui', 'email', 'IPython'],\n # 'iconfile': 'GSEMap.icns',\n }\n\nappname = 'GSEMapViewer'\nappvers = '1.1'\nsetup(name = appname,\n version = appvers,\n description = \"GSECARS XRM MapViewer\",\n options = {'build_exe': exe_opts},\n data_files = mpl_data_files + dll_files, ## + plugin_files\n executables = [Executable('../bin/GSE_MapViewer', base=None)])\n\n# contents = 'build/%s-%s.app/Contents' % (appname, appvers)\n# contents = contents.replace(' ', '\\ ')\n# \n# def sys(cmd):\n# print ' >> ', cmd\n# os.system(cmd)\n# \n# sys(\"cp -pr GSEMap.icns %s/Resources/.\" % contents)\n# sys(\"cp -pr ../dlls/darwin/* %s/MacOS/.\" % contents)\n# \n# try:\n# os.makedirs(\"%s/Resources/larch/\" % contents)\n# except:\n# pass\n# \n# for subdir in ('modules', 'plugins', 'dlls'):\n# sys(\"cp -pr ../%s %s/Resources/larch/.\" % (subdir, contents))\n# \n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "import os, sys", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 14 }, { "span": "import wx", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 9 }, { "span": "import wx.lib.agw.flatnotebook", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 30 }, { "span": "import numpy, scipy, matplotlib", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 31 }, { "span": "import sqlalchemy", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 17 }, { "span": "from scipy.sparse.csgraph import _validation", "start_line": 18, "start_column": 0, "end_line": 18, "end_column": 44 }, { "span": "import wxmplot", "start_line": 22, "start_column": 0, "end_line": 22, "end_column": 14 }, { "span": "from wxmplot.plotframe import PlotFrame", "start_line": 23, "start_column": 0, "end_line": 23, "end_column": 39 }, { "span": "import larch", "start_line": 24, "start_column": 0, "end_line": 24, "end_column": 12 }, { "span": "import Image", "start_line": 26, "start_column": 0, "end_line": 26, "end_column": 12 }, { "span": "import Carbon", "start_line": 28, "start_column": 0, "end_line": 28, "end_column": 13 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\"\"\"", "\\", "10", ";", "setup", ".", "py", " ", "script", " ", "for", " ", "cx", "\\u", "Freez", "e", "\\", "10", ";", "\\", "10", ";", "Us", "age", ":", "\\", "10", ";", " ", " ", " ", " ", "python", " ", "setup", "\\u", "freez", "e", ".", "py", " ", "bdist", "\\u", "mac", " ", "--", "icon", "file", "=", "GS", "EM", "ap", ".", "ic", 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Unused import	douban/dpark/dpark/env.py	[ { "content": "import os\nimport logging\nimport time\nimport socket\nimport shutil\nimport uuid\n\nimport zmq\n\nfrom dpark import util\nimport dpark.conf as conf\n\nlogger = logging.getLogger(__name__)\n\n\n\nenv = DparkEnv()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class DparkEnv:\n environ = {}\n\n\n\n\n", "metadata": "root.DparkEnv", "header": "['module', '___EOS___']", "index": 15 }, { "content": " @classmethod\n def register(cls, name, value):\n cls.environ[name] = value", "metadata": "root.DparkEnv.register", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 18 }, { "content": " @classmethod\n def get(cls, name, default=None):\n return cls.environ.get(name, default)", "metadata": "root.DparkEnv.get", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 22 }, { "content": " def __init__(self):\n self.started = False", "metadata": "root.DparkEnv.__init__", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 26 }, { "content": " def start(self, isMaster, environ={}):\n if self.started:\n return\n logger.debug(\"start env in %s: %s %s\", os.getpid(), isMaster, environ)\n self.isMaster = isMaster\n if isMaster:\n roots = conf.DPARK_WORK_DIR\n if isinstance(roots, str):\n roots = roots.split(',')\n name = '%s-%s' % (socket.gethostname(), uuid.uuid4())\n self.workdir = [os.path.join(root, name) for root in roots]\n try:\n for d in self.workdir:\n util.mkdir_p(d)\n except OSError as e:\n if environ.get('is_local', False):\n raise e\n\n self.environ['SERVER_URI'] = 'file://' + self.workdir[0]\n self.environ['WORKDIR'] = self.workdir\n self.environ['COMPRESS'] = util.COMPRESS\n else:\n self.environ.update(environ)\n if self.environ['COMPRESS'] != util.COMPRESS:\n raise Exception(\"no %s available\" % self.environ['COMPRESS'])\n\n self.ctx = zmq.Context()\n\n from dpark.tracker import TrackerServer, TrackerClient\n if isMaster:\n self.trackerServer = TrackerServer()\n self.trackerServer.start()\n addr = self.trackerServer.addr\n env.register('TrackerAddr', addr)\n else:\n addr = env.get('TrackerAddr')\n\n self.trackerClient = TrackerClient(addr)\n\n from dpark.cache import CacheTracker\n self.cacheTracker = CacheTracker()\n\n from dpark.shuffle import LocalFileShuffle, MapOutputTracker\n LocalFileShuffle.initialize(isMaster)\n self.mapOutputTracker = MapOutputTracker()\n from dpark.shuffle import ParallelShuffleFetcher\n self.shuffleFetcher = ParallelShuffleFetcher(2)\n\n from dpark.broadcast import start_manager\n start_manager(isMaster)\n\n self.started = True\n logger.debug(\"env started\")", "metadata": "root.DparkEnv.start", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 29 }, { "content": " def stop(self):\n if not getattr(self, 'started', False):\n return\n logger.debug(\"stop env in %s\", os.getpid())\n self.shuffleFetcher.stop()\n self.cacheTracker.stop()\n self.mapOutputTracker.stop()\n if self.isMaster:\n self.trackerServer.stop()\n from dpark.broadcast import stop_manager\n stop_manager()\n\n logger.debug(\"cleaning workdir ...\")\n for d in self.workdir:\n shutil.rmtree(d, True)\n logger.debug(\"done.\")\n\n self.started = False", "metadata": "root.DparkEnv.stop", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 83 } ]	[ { "span": "import time", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 11 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "os_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "logging_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "time_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "socket_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "shutil_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "uuid_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "zmq_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "dpa", "rk_", "import_", "util_", 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Unused import	thasso/pyjip/jip/__init__.py	[ { "content": "#!/usr/bin/env python\n\"\"\"JIP script execution and pipeline system\"\"\"\nimport jip.logger\nfrom jip.logger import log_level\nfrom jip.tools import tool, pytool, pipeline, Scanner, ValidationError, Tool,\\\n ToolNotFoundException\nfrom jip.jobs import set_state\nfrom jip.jobs import create_groups, create_jobs, create_executions\nfrom jip.jobs import run_job\nfrom jip.jobs import submit_job\nfrom jip.pipelines import Pipeline\nfrom jip.profiles import Profile\nfrom jip.configuration import Config\nfrom jip.options import ParserException\nfrom jip.db import STATE_DONE, STATE_QUEUED, STATE_CANCELED, STATE_HOLD, \\\n STATE_FAILED\n\n__version__ = \"0.6\"\n\nconfig = Config()\nscanner = Scanner(jip_path=config.get('jip_path'),\n jip_modules=config.get('jip_modules', []))\nfind = scanner.find\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "import jip.logger", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 17 }, { "span": "from jip.logger import log_level", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 32 }, { "span": "from jip.tools import tool, pytool, pipeline, Scanner, ValidationError, Tool,\\\n ToolNotFoundException", "start_line": 4, "start_column": 0, "end_line": 5, "end_column": 25 }, { "span": "from jip.jobs import set_state", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 30 }, { "span": "from jip.jobs import create_groups, create_jobs, create_executions", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 66 }, { "span": "from jip.jobs import run_job", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 28 }, { "span": "from jip.jobs import submit_job", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 31 }, { "span": "from jip.pipelines import Pipeline", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 34 }, { "span": "from jip.profiles import Profile", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 32 }, { "span": "from jip.options import ParserException", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 39 }, { "span": "from jip.db import STATE_DONE, STATE_QUEUED, STATE_CANCELED, STATE_HOLD, \\\n STATE_FAILED", "start_line": 14, "start_column": 0, "end_line": 15, "end_column": 16 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#!", "/", "usr", "/", "bin", "/", "env", " ", "python_", "\\u\\u\\uNL\\u\\u\\u_", "\"\"\"", "JI", "P", " ", "script", " ", "executi", "on", " ", "and", " ", "pipeline", " ", "system", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "ji", "p_", "._", "logger_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "ji", "p_", "._", "logger_", "import_", "log", "\\u", "level_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "ji", "p_", "._", "tools_", "import_", "tool_", ",_", "pyto", "ol_", ",_", "pipeline_", 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Except block handles 'BaseException'	Djacket/djacket/core/backend/git/http.py	[ { "content": " def get_http_info_refs(self):\n \"\"\"\n Returns a HttpResponse for info/refs requests.\n \"\"\"\n\n try:\n self.set_response_header()\n self.set_response_first_line()\n self.set_response_payload(GIT_HTTP_INFO_REFS)\n return self\n except BaseException as e:\n return get_http_error(e)", "metadata": "root.GitResponse.get_http_info_refs", "header": "['class', 'GitResponse', '(', 'HttpResponse', ')', ':', '___EOS___']", "index": 134 }, { "content": " def get_http_service_rpc(self):\n \"\"\"\n Returns a HttpResponse to 'git-upload-pack', 'git-receive-pack' requests.\n \"\"\"\n\n try:\n self.set_response_header()\n if self.service == GIT_SERVICE_RECEIVE_PACK:\n self.set_response_payload(GIT_HTTP_SERVICE_RECEIVE_PACK)\n elif self.service == GIT_SERVICE_UPLOAD_PACK:\n self.set_response_payload(GIT_HTTP_SERVICE_UPLOAD_PACK)\n return self\n except BaseException as e:\n return get_http_error(e)", "metadata": "root.GitResponse.get_http_service_rpc", "header": "['class', 'GitResponse', '(', 'HttpResponse', ')', ':', '___EOS___']", "index": 148 } ]	[ { "span": "except BaseException as e:", "start_line": 144, "start_column": 8, "end_line": 144, "end_column": 34 }, { "span": "except BaseException as e:", "start_line": 160, "start_column": 8, "end_line": 160, "end_column": 34 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "class_", "Git", "Response_", "(_", "Http", "Response_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "get", "\\u", "http", "\\u", "info", "\\u", "refs_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "Return", "s", " ", "a", " ", "Http", "Respons", "e", " ", "for", " ", "info", "/", "refs", " ", "request", "s", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "set\\u", "response", "\\u", "header_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "set\\u", "response", "\\u", "first", "\\u", "line_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "set\\u", "response", "\\u", "payload_", "(_", "GIT", "\\u", "HTTP", "\\u", "INFO", "\\u", "REF", "S_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "return_", "self_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "Base", "Exception_", "as_", "e_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "return_", "get", "\\u", "http", "\\u", "error_", "(_", "e_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "Git", "Response_", "(_", "Http", "Response_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "get", "\\u", "http", "\\u", "service", "\\u", "rpc_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "\\", "10", ";", " ", " ", " ", " ", "Return", "s", " ", "a", " ", "Http", "Respons", "e", " ", "to", " ", "'", "git", "-", "upload", "-", "pack", "',", " ", "'", "git", "-", "receive", "-", "pack", "'", " ", "request", "s", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "set\\u", "response", "\\u", "header_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "self_", "._", "service_", "==_", "GIT", "\\u", "SERV", "ICE", "\\u", "RECEIVE", "\\u", "PACK", "_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "set\\u", "response", "\\u", "payload_", "(_", "GIT", "\\u", "HTTP", "\\u", "SERV", "ICE", "\\u", "RECEIVE", "\\u", "PACK", "_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "elif_", "self_", "._", "service_", "==_", "GIT", "\\u", "SERV", "ICE", "\\u", "UPLOAD", "\\u", "PACK", "_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "set\\u", "response", "\\u", "payload_", "(_", "GIT", "\\u", "HTTP", "\\u", "SERV", "ICE", "\\u", "UPLOAD", "\\u", "PACK", "_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "self_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "Base", "Exception_", "as_", "e_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "return_", "get", "\\u", "http", "\\u", "error_", "(_", "e_", ")_" ]	[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Except block handles 'BaseException'	apache/climate/obs4MIPs/Toolbox/ESGFresources.py	[ { "content": " def __init__(self,rcFile):\n '''\n Read CMIP5 Table and convert into a dictionary\n strip quote double quote, leading and trailing white space\n from key and value.\n '''\n f=open( rcFile, 'r')\n lines=f.readlines()\n f.close()\n\n self.resources=dict([(key.strip(), value.strip(),) \n for line in lines if line != '\\n' \\\n and line[0] != \"#\" \n for (key, value) in\n [line.strip().\\\n replace(\"'\",\"\").\\\n replace(\"\\\"\",\"\").\\\n rstrip().\\\n split(\"=\")]])\n\n for key in self.resources.keys():\n self.resources[key]=self.resources[key].replace(\"\\\\\",\"\\\"\")\n \n self.xcl=None\n try:\n self.xcl=self.resources['excel_file']\n rc=self.ReadXCL()\n except:\n pass", "metadata": "root.ESGFresources.__init__", "header": "['class', 'ESGFresources', ':', '___EOS___']", "index": 32 }, { "content": " def ReadXCL(self):\n '''\n Read Excel Table and fill rc variable related field.\n '''\n try:\n import xlrd\n except:\n print \"**** Could not find xlrd Python Package \"\n print \"** Please install xlrd package to read excel files \"\n\n if( os.path.isfile(self.xcl) ):\n\t\twb=xlrd.open_workbook(self.xcl)\n else:\n print \"** Could not find \"+self.xcl+\" file \"\n print \"** Please check excel file name **\"\n raise NameError(self.xcl)\n\n sheet=wb.sheet_by_name('Variables')\n\n self.resources['cmor_var'] = [ sheet.row( i )[ 0 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n self.resources['original_var'] = [ sheet.row( i )[ 1 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n self.resources['original_units']=[ sheet.row( i )[ 2 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n self.resources['level'] =[ sheet.row( i )[ 3 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2]\n \n self.resources['equation'] =[ sheet.row( i )[ 6 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n # -----------------------------------------------------------------\n # Make sure it is a string. The main program will call eval on it.\n # -----------------------------------------------------------------\n self.resources['cmor_var'] = str(self.resources['cmor_var'] )\n self.resources['original_var'] = str(self.resources['original_var'])\n self.resources['original_units'] =str(self.resources['original_units'])\n self.resources['equation'] =str(self.resources['equation'])\n self.resources['level'] =str(self.resources['level'])\n return 1", "metadata": "root.ESGFresources.ReadXCL", "header": "['class', 'ESGFresources', ':', '___EOS___']", "index": 78 }, { "content": "def movefiles(rc): \n '''\n Change CMIP5 directory struture to obs4MIPS directory structure.\n Create new path and rename files following with new convention \n Remove old directory tree.\n '''\n # ----------------------\n # New path for obs4MIPS\n # ----------------------\n path = rc['institute_id' ] + '/' + \\\n rc['instrument' ] + '/' + \\\n rc['project_id' ] + '/' + \\\n rc['product' ] + '/' + \\\n rc['modeling_realm' ] + '/' + \\\n rc['cvrt_cmor_var' ] + '/' + \\\n rc['frequency' ] + '/' + \\\n rc['data_structure' ] + '/' + \\\n rc['institute_id' ] + '/' + \\\n rc['instrument' ] \n \n # -------------------------------------------------------------\n # For TRMM data set version_directory is set to 'false' so that\n # no version will be created in the directory\n # -------------------------------------------------------------\n try:\n rc['version_directory'] == 'false'\n pass\n except:\n path += '/V' + rc['processing_version'] + '/'\n\n # -----------------------------\n # Make sure the directory exist \n # ------------------------------\n try:\n os.makedirs(path)\n except:\n None\n\n # -----------------\n # Rename all files\n # -----------------\n cmorpath = rc['project_id' ] + '/' + \\\n rc['product' ] + '/' + \\\n rc['institute_id'] + '/' \n\n # -----------------\n # Manage attributes\n # -----------------\n for r,d,f in os.walk(cmorpath):\n for files in f:\n if files.endswith(\".nc\"):\n filetimestamp = files.split('_')[-1].strip(\".nc\")\n file = os.path.join(r,files)\n print file\n # -----------------\n # Delete attributes\n # ------------------\n Attr=CMORAttributes( file )\n DelGlbAttributes=eval(rc['DelGlbAttributes'].\\\n replace('\\\\','\\''))\n for attribute in DelGlbAttributes:\n print \"Deleting attribute: %s\" % attribute\n Attr.GlbDel(attribute)\n # -----------------\n # set attributes\n # ------------------\n SetGlbAttributes=eval(rc['SetGlbAttributes'].\\\n replace('\\\\','\\''))\n for (attribute,Value) in SetGlbAttributes:\n print \"Assigning attribute (%s,%s)\" % (attribute,Value)\n Attr.GlbSet(attribute,Value)\n Attr.close()\n\n source = ''\n if( rc['source_fn'] == 'SYNOPTIC' ):\n source = rc['SYNOPTIC']+\"z_\"\n elif( rc['source_fn'] != '' ):\n source = rc['source_fn'].split('_')[0] + '_'\n \n newfilename = rc['cvrt_cmor_var' ] + '_' + \\\n rc['instrument' ] + '-' + \\\n source + \\\n rc['processing_level' ] + '_v'+ \\\n rc['processing_version'] + '_' + \\\n filetimestamp + '.nc'\n \n newfilename = os.path.join(path,newfilename)\n # -----------\n # Move files\n # -----------\n print file\n print newfilename\n os.rename(file,newfilename)\n\n \n # ----------------\n # Remove cmor path\n # ----------------\n shutil.rmtree( rc['project_id'] )\n return 0", "metadata": "root.movefiles", "header": "['module', '___EOS___']", "index": 133 } ]	[ { "span": "except:", "start_line": 59, "start_column": 8, "end_line": 59, "end_column": 15 }, { "span": "except:", "start_line": 84, "start_column": 8, "end_line": 84, "end_column": 15 }, { "span": "except:", "start_line": 160, "start_column": 4, "end_line": 160, "end_column": 11 }, { "span": "except:", "start_line": 168, "start_column": 4, "end_line": 168, "end_column": 11 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "class_", "ES", "GF", "resources_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "def_", "\\u\\u", "init\\u\\u_", "(_", "self_", ",_", "rc", "File_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "'''", "\\", "10", ";", " ", " ", " ", " ", "Read", " ", "CM", "IP", "5", " ", "Table", " ", "and", " ", "convert", " ", "int", "o", " ", "a", " ", "dictionar", "y", "\\", "10", ";", " ", " ", " ", " ", "strip", " ", "quote", " ", "double", " ", "quote", ",", " ", "lead", "ing", " ", "and", " ", "trail", "ing", " ", "white", " ", "space", "\\", "10", ";", " ", " ", " ", " ", "from", " ", "key", " ", "and", " ", "value", ".", "\\", "10", ";", " ", " ", " ", " ", "'''_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "f_", "=_", "open_", "(_", "rc", "File_", ",_", "'", "r", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "lines_", "=_", "f_", "._", "readlines_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "f_", "._", "close_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "self_", "._", "resources_", "=_", "dict_", "(_", "[_", "(_", "key_", "._", "strip_", "(_", ")_", ",_", "value_", "._", "strip_", "(_", ")_", ",_", ")_", "\\u\\u\\uNL\\u\\u\\u_", "for_", "line_", "in_", "lines_", "if_", "line_", "!=_", "'\\\\", "n", "'_", "and_", "line_", "[_", "0_", "]_", "!=_", "\"#\"_", "\\u\\u\\uNL\\u\\u\\u_", "for_", "(_", "key_", ",_", "value_", ")_", "in_", "\\u\\u\\uNL\\u\\u\\u_", "[_", "line_", "._", "strip_", "(_", ")_", "._", "replace_", "(_", "\"'\"_", ",_", "\"\"_", ")_", "._", "replace_", "(_", "\"\\\\\"\"_", ",_", "\"\"_", ")_", "._", "rstrip_", "(_", ")_", "._", "split_", "(_", "\"=\"_", ")_", "]_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "for_", "key_", "in_", "self_", "._", "resources_", "._", "keys_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "resources_", "[_", "key_", "]_", "=_", "self_", "._", "resources_", "[_", "key_", "]_", "._", "replace_", "(_", "\"\\\\\\\\\"_", ",_", "\"\\\\\"\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "self_", "._", "xc", "l_", "=_", "None_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "xc", "l_", "=_", "self_", "._", "resources_", "[_", "'", "exce", "l\\u", "file", "'_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "rc_", "=_", "self_", "._", "Read", "XC", "L_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "pass_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "ES", "GF", "resources_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "Read", "XC", "L_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "'''", "\\", "10", ";", " ", " ", " ", " ", "Read", " ", "Exce", "l", " ", "Table", " ", "and", " ", "fill", " ", "rc", " ", "variab", 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"workbook_", "(_", "self_", "._", "xc", "l_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "print_", "\"", "", " ", "Cou", "ld", " ", "not", " ", "find", " ", "\"_", "+_", "self_", "._", "xc", "l_", "+_", "\"", " ", "file", " ", "**", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "print_", "\"", "", " ", "Ple", "ase", " ", "check", " ", "exce", "l", " ", "file", " ", "name", " ", "****", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "raise_", "Name", "Error_", "(_", "self_", "._", "xc", "l_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "sheet_", "=_", "wb_", "._", "sheet", "\\u", "by", "\\u", "name_", "(_", "'", "Varia", "bles", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "self_", "._", "resources_", "[_", "'", "cmo", "r", "\\u", "var", "'_", "]_", "=_", "[_", "sheet_", "._", "row_", "(_", "i_", ")_", "[_", "0_", "]_", "._", "value_", 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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	pyjs/pyjs/examples/libtest/CompileTest.py	[ { "content": " def test_callfunc_expressions(self):\n s = \"123\"\n x = ('a' + 'b').strip()\n (\" \" + s).rstrip()\n #self.fail(\"Callfunc over expressions, #591\")", "metadata": "root.CompileTest.test_callfunc_expressions", "header": "['class', 'CompileTest', '(', 'UnitTest', '.', 'UnitTest', ')', ':', '___EOS___']", "index": 27 }, { "content": " def test_subscript_tuple(self):\n d = {}\n d[(1,2)] = 3\n x = d[1,2]\n d[3,4] = 5\n #self.fail(\"Tuple subscripts issue #496\")", "metadata": "root.CompileTest.test_subscript_tuple", "header": "['class', 'CompileTest', '(', 'UnitTest', '.', 'UnitTest', ')', ':', '___EOS___']", "index": 41 } ]	[ { "span": "x ", "start_line": 29, "start_column": 8, "end_line": 29, "end_column": 9 }, { "span": "x ", "start_line": 44, "start_column": 8, "end_line": 44, "end_column": 9 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", "Compil", "e", "Test_", "(_", "Unit", "Test_", "._", "Unit", "Test_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "call", "func", "\\u", "expressions_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "s_", "=_", "\"", "123", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "x_", "=_", "(_", "'", "a", "'_", "+_", "'", "b", "'_", ")_", "._", "strip_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "(_", "\"", " ", " ", " ", " ", "\"_", "+_", "s_", ")_", "._", "rstrip_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", "self", ".", "fail", "(\"", "Call", "func", " ", "over", " ", "express", "ion", "s", ",", " ", "#", "591", "\")", "_", "\\u\\u\\uNL\\u\\u\\u_", "[SEP]_", "class_", "Compil", "e", "Test_", "(_", "Unit", "Test_", "._", "Unit", "Test_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "subscript", "\\u", "tuple_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "d_", "=_", "{_", "}_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "d_", "[_", "(_", "1_", ",_", "2_", ")_", "]_", "=_", "3_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "x_", "=_", "d_", "[_", "1_", ",_", "2_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "d_", "[_", "3_", ",_", "4_", "]_", "=_", "5_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", "self", ".", "fail", "(\"", "Tup", "le", " ", "subscript", "s", " ", "issue", " ", "#", "496", "\")", "_", "\\u\\u\\uNL\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	b3mb4m/shellsploit-framework/shell/inject/Linux86/inject.py	[ { "content": "def injectmex86(pid, shellcode):\n from sys import platform\n\n if platform.startswith('win'):\n print (\"\\nPtrace not working on windows machines ..\\n\")\n return False\n else:\n try:\n from ptrace.debugger.debugger import PtraceDebugger\n from ptrace.debugger.debugger import PtraceProcess\n except ImportError: \n print (\"\\nYou must install ptrace library before use this script.\\n\")\n return False\n else:\n try:\n dbg = PtraceDebugger()\n process = dbg.addProcess(int(pid), False)\n eip = process.getInstrPointer()\n bytes = process.writeBytes(eip, shellcode.replace(\"\\\\x\", \"\").decode(\"hex\"))\n process.setreg(\"ebx\", 0)\n process.cont()\n except Exception as error:\n print (error)\n print (\"\\nPlease do not forget report !\\n\")\n else:\n print (\"\\nInject complate !\\n\")", "metadata": "root.injectmex86", "header": "['module', '___EOS___']", "index": 9 } ]	[ { "span": "bytes ", "start_line": 27, "start_column": 16, "end_line": 27, "end_column": 21 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "inject", "me", "x8", "6_", "(_", "pid_", ",_", "shellcode_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "from_", "sys_", "import_", "platform_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "if_", "platform_", "._", "startswith_", "(_", "'", "win", "'_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "print_", "(_", "\"\\\\", "n", "Pt", "race", " ", "not", " ", "working", " ", "on", " ", "windows", " ", "machine", "s", " ", "..", "\\\\", "n", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "return_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "from_", "ptr", "ace_", "._", "debugger_", "._", "debugger_", "import_", "Pt", "race", "Debugger", "_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "from_", "ptr", "ace_", "._", "debugger_", "._", "debugger_", "import_", "Pt", "race", "Process_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "Import", "Error_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "print_", "(_", "\"\\\\", "n", "You", " ", "must", " ", "install", " ", "ptr", "ace", " ", "librar", "y", " ", "bef", "ore", " ", "use", " ", "this", " ", "script", ".\\\\", "n", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "return_", "False_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "try_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "dbg_", "=_", "Pt", "race", "Debugger", "_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "process_", "=_", "dbg_", "._", "add", "Process_", "(_", "int_", "(_", "pid_", ")_", ",_", "False_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "eip", "_", "=_", "process_", "._", "get", "Instr", "Pointer_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "bytes_", "=_", "process_", "._", "write", "Bytes_", "(_", "eip", "_", ",_", "shellcode_", "._", "replace_", "(_", "\"\\\\\\\\", "x", "\"_", ",_", "\"\"_", ")_", "._", "decode_", "(_", "\"", "hex", "\"_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "process_", "._", "setre", "g_", "(_", "\"", "eb", "x", "\"_", ",_", "0_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "process_", "._", "cont_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "except_", "Exception_", "as_", "error_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "print_", "(_", "error_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "print_", "(_", "\"\\\\", "n", "Ple", "ase", " ", "do", " ", "not", " ", "forget", " ", "report", " ", "!\\\\", "n", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "else_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "print_", "(_", "\"\\\\", "n", "Inject", " ", "compl", "ate", " ", "!\\\\", "n", "\"_", ")_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Unused local variable	lukesneeringer/django-pgfields/tests/composite/tests.py	[ { "content": " def test_invalid_composite_instance_init(self):\n \"\"\"Test that if I send duplicate values to a CompositeInstance,\n that we raise the appropriate exception.\n \"\"\"\n with self.assertRaises(TypeError):\n monarch = Monarch('King', title='King', name='Elessar', suffix=2)", "metadata": "root.CompositeTestCase.test_invalid_composite_instance_init", "header": "['class', 'CompositeTestCase', '(', 'TestCase', ')', ':', '___EOS___']", "index": 91 }, { "content": " def test_invalid_composite_instance_key(self):\n \"\"\"Test that an invalid composite instance key raises a KeyError\n as expected.\n \"\"\"\n with self.assertRaises(KeyError):\n monarch = Monarch(title='King', label='Elessar', suffix=2)", "metadata": "root.CompositeTestCase.test_invalid_composite_instance_key", "header": "['class', 'CompositeTestCase', '(', 'TestCase', ')', ':', '___EOS___']", "index": 98 }, { "content": " def test_related_field_raises(self):\n \"\"\"Test that we cannot create a CompositeField subclass with\n any sort of RelatedField as a member.\n \"\"\"\n with self.assertRaises(TypeError):\n class CitizenField(models.CompositeField):\n first_name = models.CharField(max_length=20)\n last_name = models.CharField(max_length=30)\n resident_of = models.ForeignKey(Monarchy)\n with self.assertRaises(TypeError):\n class CitizenField(models.CompositeField):\n first_name = models.CharField(max_length=20)\n last_name = models.CharField(max_length=30)\n authors = models.ManyToManyField(Author)", "metadata": "root.CompositeTestCase.test_related_field_raises", "header": "['class', 'CompositeTestCase', '(', 'TestCase', ')', ':', '___EOS___']", "index": 105 } ]	[ { "span": "monarch ", "start_line": 96, "start_column": 12, "end_line": 96, "end_column": 19 }, { "span": "monarch ", "start_line": 103, "start_column": 12, "end_line": 103, "end_column": 19 }, { "span": "CitizenField(", "start_line": 115, "start_column": 18, "end_line": 115, "end_column": 30 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "class_", "Composit", "e", "Test", "Case_", "(_", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "invalid", "\\u", "composi", "te", "\\u", "instance", "\\u", "init_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "Test", " ", "tha", "t", " ", "if", " ", "I", " ", "send", " ", "duplicat", "e", " ", "values", " ", "to", " ", "a", " ", "Composit", "e", "Insta", "nce", ",", "\\", "10", ";", " ", " ", " ", " ", "tha", "t", " ", "we", " ", "raise", " ", "the", " ", "appropr", "iate", " ", "exception", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "with_", "self_", "._", "assert", "Raises_", "(_", "Type", "Error_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "mona", "rch", "_", "=_", "Mon", "arch_", "(_", "'", "King", "'_", ",_", "title_", "=_", "'", "King", "'_", ",_", "name_", "=_", "'", "Ele", "ssa", "r", "'_", ",_", "suffix_", "=_", "2_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "Composit", "e", "Test", "Case_", "(_", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "invalid", "\\u", "composi", "te", "\\u", "instance", "\\u", "key_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "Test", " ", "tha", "t", " ", "an", " ", "invalid", " ", "composi", "te", " ", "instance", " ", "key", " ", "raise", "s", " ", "a", " ", "Key", "Error", "\\", "10", ";", " ", " ", " ", " ", "as", " ", "expected", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "with_", "self_", "._", "assert", "Raises_", "(_", "Key", "Error_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "mona", "rch", "_", "=_", "Mon", "arch_", "(_", "title_", "=_", "'", "King", "'_", ",_", "label_", "=_", "'", "Ele", "ssa", "r", "'_", ",_", "suffix_", "=_", "2_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "[SEP]_", "class_", "Composit", "e", "Test", "Case_", "(_", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "relate", "d\\u", "field", "\\u", "raises_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "Test", " ", "tha", "t", " ", "we", " ", "cann", "ot", " ", "create", " ", "a", " ", "Composit", "e", "Field", " ", "subclass", " ", "with", "\\", "10", ";", " ", " ", " ", " ", "any", " ", "sort", " ", "of", " ", "Rela", "ted", "Field", " ", "as", " ", "a", " ", "member", ".", "\\", "10", ";", " ", " ", " ", " ", "\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "with_", "self_", "._", "assert", "Raises_", "(_", "Type", "Error_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "class_", "Cit", "ize", "n", "Field_", "(_", "models_", "._", "Composit", "e", "Field_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "first", "\\u", "name_", "=_", "models_", "._", "Char", "Field_", "(_", "max", "\\u", "length_", "=_", "20_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "last", "\\u", "name_", "=_", "models_", "._", "Char", "Field_", "(_", "max", "\\u", "length_", "=_", "30_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "resident", "\\u", "of_", "=_", "models_", "._", "Fore", "ign", "Key_", "(_", "Mon", "arch", "y_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "with_", "self_", "._", "assert", "Raises_", "(_", "Type", "Error_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "class_", "Cit", "ize", "n", "Field_", "(_", "models_", "._", "Composit", "e", "Field_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "first", "\\u", "name_", "=_", "models_", "._", "Char", "Field_", "(_", "max", "\\u", "length_", "=_", "20_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "last", "\\u", "name_", "=_", "models_", "._", "Char", "Field_", "(_", "max", "\\u", "length_", "=_", "30_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "authors_", "=_", "models_", "._", "Many", "To", "Many", "Field_", "(_", "Author_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]	[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Except block handles 'BaseException'	pgiri/asyncoro/py2/asyncoro/__init__.py	[ { "content": "\"\"\"\nThis file is part of asyncoro; see http://asyncoro.sourceforge.net\nfor details.\n\nThis module provides framework for concurrent, asynchronous network\nprogramming with coroutines, asynchronous completions and message\npassing. Other modules in asyncoro download package provide API for\ndistributed programming, asynchronous pipes, distributed concurrent\ncommunicating processes.\n\"\"\"\n\n__author__ = \"Giridhar Pemmasani ([email protected])\"\n__email__ = \"[email protected]\"\n__copyright__ = \"Copyright (c) 2012-2014 Giridhar Pemmasani\"\n__contributors__ = []\n__maintainer__ = \"Giridhar Pemmasani ([email protected])\"\n__license__ = \"MIT\"\n__url__ = \"http://asyncoro.sourceforge.net\"\n__status__ = \"Production\"\n__version__ = \"4.0\"\n\n__all__ = ['AsyncSocket', 'AsynCoroSocket', 'Coro', 'AsynCoro',\n 'Lock', 'RLock', 'Event', 'Condition', 'Semaphore',\n 'HotSwapException', 'MonitorException', 'Location', 'Channel',\n 'CategorizeMessages', 'AsyncThreadPool', 'AsyncDBCursor',\n 'MetaSingleton', 'logger', 'serialize', 'unserialize']\n\nimport time\nimport threading\nimport functools\nimport socket\nimport inspect\nimport traceback\nimport select\nimport sys\nimport types\nimport struct\nimport re\nimport logging\nimport errno\nimport platform\nimport ssl\nfrom heapq import heappush, heappop\nfrom bisect import bisect_left\nimport Queue as queue\nimport atexit\nimport collections\nimport cPickle as pickle\nimport copy\n\nif platform.system() == 'Windows':\n from errno import WSAEINPROGRESS as EINPROGRESS\n from errno import WSAEWOULDBLOCK as EWOULDBLOCK\n from errno import WSAEINVAL as EINVAL\n from time import clock as _time\n _time()\nelse:\n from errno import EINPROGRESS\n from errno import EWOULDBLOCK\n from errno import EINVAL\n from time import time as _time\n\n\n\n\n\n\n\n\n\n\nlogger = Logger('asyncoro')\n\n\n\n\nif platform.system() == 'Windows':\n # use IOCP if pywin32 (http://pywin32.sf.net) is installed\n try:\n import win32file\n import win32event\n import pywintypes\n import winerror\n except:\n logger.warning('Could not load pywin32 for I/O Completion Ports; '\n 'using inefficient polling for sockets')\n else:\n # for UDP we need 'select' polling (pywin32 doesn't yet support\n # UDP); _AsyncPoller below is combination of the other\n # _AsyncPoller for epoll/poll/kqueue/select and _SelectNotifier\n # below. (Un)fortunately, most of it is duplicate code\n\n\n\n\nif not isinstance(getattr(sys.modules[__name__], '_AsyncNotifier', None), MetaSingleton):\n\n\n\n AsyncSocket = _AsyncSocket\n _AsyncNotifier = _AsyncPoller\n\n\nAsynCoroSocket = AsyncSocket\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": " def _async_recv(self, bufsize, args):\n \"\"\"Internal use only; use 'recv' with 'yield' instead.\n\n Asynchronous version of socket recv method.\n \"\"\"\n def _recv(self, bufsize, args):\n try:\n buf = self._rsock.recv(bufsize, args)\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)\n\n self._read_task = functools.partial(_recv, self, bufsize, args)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)\n if self._certfile and self._rsock.pending():\n try:\n buf = self._rsock.recv(bufsize)\n except socket.error as err:\n if err.args[0] != EWOULDBLOCK:\n self._read_task = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro.throw(sys.exc_info())\n else:\n if buf:\n self._read_task = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)", "metadata": "root._AsyncSocket._async_recv", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 361 }, { "content": " def _async_recvall(self, bufsize, args):\n \"\"\"Internal use only; use 'recvall' with 'yield' instead.\n\n Receive exactly bufsize bytes. If socket's timeout is set and\n it expires before all the data could be read, it returns\n partial data read if any data has been read at all. If no data\n has been read before timeout, then it causes 'socket.timeout'\n exception to be thrown.\n \"\"\"\n def _recvall(self, view, args):\n try:\n recvd = self._rsock.recv_into(view, len(view), args)\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(sys.exc_info())\n else:\n if recvd:\n view = view[recvd:]\n if len(view) == 0:\n buf = str(self._read_result)\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)\n else:\n if self._timeout:\n self._notifier._del_timeout(self)\n self._notifier._add_timeout(self)\n self._read_task = functools.partial(_recvall, self, view, args)\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_('')\n\n self._read_result = bytearray(bufsize)\n view = memoryview(self._read_result)\n self._read_task = functools.partial(_recvall, self, view, args)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)\n if self._certfile and self._rsock.pending():\n try:\n recvd = self._rsock.recv_into(view, bufsize)\n except socket.error as err:\n if err.args[0] != EWOULDBLOCK:\n self._read_task = self._read_result = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro.throw(sys.exc_info())\n else:\n if recvd == bufsize:\n buf = str(self._read_result)\n self._read_task = self._read_result = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)\n elif recvd:\n view = view[recvd:]\n self._read_task = functools.partial(_recvall, self, view, args)", "metadata": "root._AsyncSocket._async_recvall", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 408 }, { "content": " def _async_recvfrom(self, args):\n \"\"\"Internal use only; use 'recvfrom' with 'yield' instead.\n\n Asynchronous version of socket recvfrom method.\n \"\"\"\n def _recvfrom(self, args):\n try:\n res = self._rsock.recvfrom(args)\n except:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(res)\n\n self._read_task = functools.partial(_recvfrom, self, args)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)", "metadata": "root._AsyncSocket._async_recvfrom", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 495 }, { "content": " def _async_send(self, args):\n \"\"\"Internal use only; use 'send' with 'yield' instead.\n\n Asynchronous version of socket send method.\n \"\"\"\n def _send(self, args):\n try:\n sent = self._rsock.send(args)\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro._proceed_(sent)\n\n self._write_task = functools.partial(_send, self, args)\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)", "metadata": "root._AsyncSocket._async_send", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 519 }, { "content": " def _async_sendto(self, args):\n \"\"\"Internal use only; use 'sendto' with 'yield' instead.\n\n Asynchronous version of socket sendto method.\n \"\"\"\n def _sendto(self, args):\n try:\n sent = self._rsock.sendto(args)\n except:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro._proceed_(sent)\n\n self._write_task = functools.partial(_sendto, self, args)\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)", "metadata": "root._AsyncSocket._async_sendto", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 551 }, { "content": " def _async_sendall(self, data):\n \"\"\"Internal use only; use 'sendall' with 'yield' instead.\n\n Asynchronous version of socket sendall method. If socket's\n timeout is set and it expires before all the data could be\n sent, it returns the length of data sent if any data is\n sent. If no data has been sent before timeout, then it causes\n 'socket.timeout' exception to be thrown.\n \"\"\"\n def _sendall(self, data_len):\n try:\n sent = self._rsock.send(self._write_result)\n if sent < 0:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(sys.exc_info())\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(sys.exc_info())\n else:\n if sent > 0:\n self._write_result = self._write_result[sent:]\n if len(self._write_result) == 0:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro._proceed_(None)\n elif self._timeout:\n self._notifier._del_timeout(self)\n self._notifier._add_timeout(self)\n\n self._write_result = buffer(data)\n self._write_task = functools.partial(_sendall, self, len(data))\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)", "metadata": "root._AsyncSocket._async_sendall", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 575 }, { "content": " def _async_accept(self):\n \"\"\"Internal use only; use 'accept' with 'yield' instead.\n\n Asynchronous version of socket accept method. Socket in\n returned pair is asynchronous socket (instance of\n AsyncSocket with blocking=False).\n \"\"\"\n def _accept(self):\n conn, addr = self._rsock.accept()\n self._read_task = None\n self._notifier.unregister(self)\n\n if self._certfile:\n if not self.ssl_server_ctx and hasattr(ssl, 'create_default_context'):\n self.ssl_server_ctx = ssl.create_default_context(ssl.Purpose.CLIENT_AUTH)\n self.ssl_server_ctx.load_cert_chain(certfile=self._certfile,\n keyfile=self._keyfile)\n\n def _ssl_handshake(conn, addr):\n try:\n conn._rsock.do_handshake()\n except ssl.SSLError as err:\n if (err.args[0] == ssl.SSL_ERROR_WANT_READ or\n err.args[0] == ssl.SSL_ERROR_WANT_WRITE):\n pass\n else:\n conn._read_task = conn._write_task = None\n coro, conn._read_coro = conn._read_coro, None\n conn._write_coro = None\n conn.close()\n coro.throw(sys.exc_info())\n except:\n conn._read_task = conn._write_task = None\n coro, conn._read_coro = conn._read_coro, None\n conn._write_coro = None\n conn.close()\n coro.throw(sys.exc_info())\n else:\n conn._read_task = conn._write_task = None\n coro, conn._read_coro = conn._read_coro, None\n conn._notifier.clear(conn)\n coro._proceed_((conn, addr))\n conn = AsyncSocket(conn, blocking=False, keyfile=self._keyfile,\n certfile=self._certfile, ssl_version=self._ssl_version)\n try:\n if self.ssl_server_ctx:\n conn._rsock = self.ssl_server_ctx.wrap_socket(conn._rsock,\n server_side=True,\n do_handshake_on_connect=False)\n else:\n conn._rsock = ssl.wrap_socket(conn._rsock, certfile=self._certfile,\n keyfile=self._keyfile,\n ssl_version=self._ssl_version,\n server_side=True,\n do_handshake_on_connect=False)\n except:\n coro, self._read_coro = self._read_coro, None\n conn.close()\n coro.throw(sys.exc_info())\n else:\n conn._read_task = conn._write_task = functools.partial(_ssl_handshake, conn, addr)\n conn._read_coro = conn._write_coro = self._read_coro\n self._read_coro = None\n conn._notifier.add(conn, _AsyncPoller._Read \| _AsyncPoller._Write)\n conn._read_task()\n else:\n coro, self._read_coro = self._read_coro, None\n conn = AsyncSocket(conn, blocking=False)\n coro._proceed_((conn, addr))\n\n self._read_task = functools.partial(_accept, self)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)", "metadata": "root._AsyncSocket._async_accept", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 637 }, { "content": " def _async_connect(self, args):\n \"\"\"Internal use only; use 'connect' with 'yield' instead.\n\n Asynchronous version of socket connect method.\n \"\"\"\n def _connect(self, args):\n err = self._rsock.getsockopt(socket.SOL_SOCKET, socket.SO_ERROR)\n if err:\n self._notifier.unregister(self)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(socket.error(err))\n elif self._certfile:\n def _ssl_handshake(self):\n try:\n self._rsock.do_handshake()\n except ssl.SSLError as err:\n if (err.args[0] == ssl.SSL_ERROR_WANT_READ or\n err.args[0] == ssl.SSL_ERROR_WANT_WRITE):\n pass\n else:\n self._read_task = self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._read_coro = None\n self.close()\n coro.throw(sys.exc_info())\n except:\n self._read_task = self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._read_coro = None\n self.close()\n coro.throw(sys.exc_info())\n else:\n self._notifier.clear(self)\n self._read_task = self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._read_coro = None\n coro._proceed_(0)\n\n try:\n # TODO: provide 'ca_certs' as special parameter to 'accept'?\n # For now this setup wrks for self-signed certs\n self._rsock = ssl.wrap_socket(self._rsock, ca_certs=self._certfile,\n cert_reqs=ssl.CERT_REQUIRED, server_side=False,\n do_handshake_on_connect=False)\n except:\n coro, self._write_coro = self._write_coro, None\n self.close()\n coro.throw(sys.exc_info())\n else:\n self._read_task = self._write_task = functools.partial(_ssl_handshake, self)\n self._read_coro = self._write_coro\n self._notifier.add(self, _AsyncPoller._Read)\n self._write_task()\n else:\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._notifier.clear(self, _AsyncPoller._Write)\n coro._proceed_(0)\n\n self._write_task = functools.partial(_connect, self, args)\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)\n try:\n self._rsock.connect(args)\n except socket.error as e:\n if e.args[0] == EINPROGRESS or e.args[0] == EWOULDBLOCK:\n pass\n else:\n raise", "metadata": "root._AsyncSocket._async_connect", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 712 }, { "content": " def _iocp_connect(self, host_port):\n \"\"\"Internal use only; use 'connect' with 'yield' instead.\n \"\"\"\n def _connect(self, err, n):\n def _ssl_handshake(self, err, n):\n try:\n self._rsock.do_handshake()\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n err, n = win32file.WSARecv(self._fileno, self._read_result,\n self._read_overlap, 0)\n elif err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n err, n = win32file.WSASend(self._fileno, '', self._read_overlap, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro = self._read_coro\n self.close()\n if coro:\n coro.throw(sys.exc_info())\n except:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro = self._read_coro\n self.close()\n if err != winerror.ERROR_OPERATION_ABORTED and coro:\n coro.throw(socket.error(err))\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_(0)\n\n if err:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n if err == winerror.ERROR_OPERATION_ABORTED:\n self._read_coro = None\n else:\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro.throw(socket.error(err))\n else:\n self._rsock.setsockopt(socket.SOL_SOCKET,\n win32file.SO_UPDATE_CONNECT_CONTEXT, '')\n if self._certfile:\n self._rsock = ssl.wrap_socket(self._rsock, ca_certs=self._certfile,\n cert_reqs=ssl.CERT_REQUIRED,\n server_side=False,\n do_handshake_on_connect=False)\n self._read_result = win32file.AllocateReadBuffer(0)\n self._read_overlap.object = functools.partial(_ssl_handshake, self)\n self._read_overlap.object(None, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_(0)\n\n # ConnectEX requires socket to be bound!\n try:\n self._rsock.bind(('0.0.0.0', 0))\n except socket.error as exc:\n if exc[0] != EINVAL:\n raise\n self._read_overlap.object = functools.partial(_connect, self)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n if self._timeout:\n self._notifier._add_timeout(self)\n err, n = win32file.ConnectEx(self._rsock, host_port, self._read_overlap)\n if err and err != winerror.ERROR_IO_PENDING:\n self._read_overlap.object = self._read_result = self._read_coro = None\n raise socket.error(err)", "metadata": "root.AsyncSocket._iocp_connect", "header": "['class', 'AsyncSocket', '(', '_AsyncSocket', ')', ':', '___EOS___']", "index": 1451 }, { "content": " def _iocp_accept(self):\n \"\"\"Internal use only; use 'accept' with 'yield'\n instead. Socket in returned pair is asynchronous\n socket (instance of AsyncSocket with blocking=False).\n \"\"\"\n def _accept(self, conn, err, n):\n def _ssl_handshake(self, conn, addr, err, n):\n try:\n conn._rsock.do_handshake()\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n err, n = win32file.WSARecv(conn._fileno, self._read_result,\n self._read_overlap, 0)\n elif err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n err, n = win32file.WSASend(conn._fileno, '', self._read_overlap, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n conn.close()\n if coro:\n coro.throw(sys.exc_info())\n except:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n conn.close()\n if err != winerror.ERROR_OPERATION_ABORTED and coro:\n coro.throw(socket.error(err))\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_((conn, addr))\n\n if err:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if err != winerror.ERROR_OPERATION_ABORTED and coro:\n coro.throw(socket.error(err))\n else:\n family, laddr, raddr = win32file.GetAcceptExSockaddrs(conn, self._read_result)\n # TODO: unpack raddr if family != AF_INET\n conn._rsock.setsockopt(socket.SOL_SOCKET, win32file.SO_UPDATE_ACCEPT_CONTEXT,\n struct.pack('P', self._fileno))\n if self._certfile:\n if not self.ssl_server_ctx and hasattr(ssl, 'create_default_context'):\n self.ssl_server_ctx = ssl.create_default_context(ssl.Purpose.CLIENT_AUTH)\n self.ssl_server_ctx.load_cert_chain(certfile=self._certfile,\n keyfile=self._keyfile)\n\n if self.ssl_server_ctx:\n conn._rsock = self.ssl_server_ctx.wrap_socket(conn._rsock,\n server_side=True,\n do_handshake_on_connect=False)\n else:\n conn._rsock = ssl.wrap_socket(conn._rsock, certfile=self._certfile,\n keyfile=self._keyfile,\n server_side=True,\n ssl_version=self._ssl_version,\n do_handshake_on_connect=False)\n\n self._read_result = win32file.AllocateReadBuffer(0)\n self._read_overlap.object = functools.partial(_ssl_handshake, self,\n conn, raddr)\n self._read_overlap.object(None, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_((conn, raddr))\n\n sock = socket.socket(self._rsock.family, self._rsock.type, self._rsock.proto)\n conn = AsyncSocket(sock, keyfile=self._keyfile, certfile=self._certfile,\n ssl_version=self._ssl_version)\n self._read_result = win32file.AllocateReadBuffer(win32file.CalculateSocketEndPointSize(sock))\n self._read_overlap.object = functools.partial(_accept, self, conn)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n if self._timeout:\n self._notifier._add_timeout(self)\n err = win32file.AcceptEx(self._fileno, conn._fileno, self._read_result,\n self._read_overlap)\n if err and err != winerror.ERROR_IO_PENDING:\n self._read_overlap.object = self._read_result = self._read_coro = None\n raise socket.error(err)", "metadata": "root.AsyncSocket._iocp_accept", "header": "['class', 'AsyncSocket', '(', '_AsyncSocket', ')', ':', '___EOS___']", "index": 1533 }, { "content": " def poll(self, timeout):\n \"\"\"Calls 'task' method of registered fds when there is a\n read/write event for it.\n \"\"\"\n\n if timeout == 0:\n poll_timeout = timeout\n elif self._timeouts:\n poll_timeout = self._timeouts[0][0] - _time()\n if timeout is not None:\n poll_timeout = min(timeout, poll_timeout)\n poll_timeout = self.timeout_multiplier\n elif timeout is None:\n poll_timeout = _AsyncPoller._Block\n else:\n poll_timeout = timeout * self.timeout_multiplier\n\n try:\n events = self._poller.poll(poll_timeout)\n except:\n logger.debug('poll failed')\n logger.debug(traceback.format_exc())\n # prevent tight loops\n time.sleep(5)\n return\n try:\n for fileno, event in events:\n fd = self._fds.get(fileno, None)\n if fd is None:\n if event != _AsyncPoller._Hangup:\n logger.debug('invalid fd for event %s', event)\n continue\n if event & _AsyncPoller._Read:\n if fd._read_task is None:\n logger.debug('fd %s is not registered for read; unregistering it',\n fd._fileno)\n self.unregister(fd)\n else:\n fd._read_task()\n elif event & _AsyncPoller._Write:\n if fd._write_task is None:\n logger.debug('fd %s is not registered for write; unregistering it',\n fd._fileno)\n self.unregister(fd)\n else:\n fd._write_task()\n elif event & _AsyncPoller._Hangup:\n fd._eof()\n elif event & _AsyncPoller._Error:\n logger.warning('error on fd %s', fd._fileno)\n self.unregister(fd)\n except:\n logger.debug(traceback.format_exc())\n\n if self._timeouts:\n now = _time()\n while self._timeouts and self._timeouts[0][0] <= now:\n fd_timeout, fd = self._timeouts.pop(0)\n if fd._timeout_id == fd_timeout:\n fd._timeout_id = None\n fd._timed_out()", "metadata": "root._AsyncPoller.poll", "header": "['class', '_AsyncPoller', '(', 'object', ')', ':', '___EOS___']", "index": 1712 }, { "content": " def terminate(self):\n self.cmd_wsock.close()\n self.cmd_rsock.close()\n if len(self._timeouts):\n logger.warning('pending timeouts: %s', len(self._timeouts))\n if hasattr(self._poller, 'terminate'):\n self._poller.terminate()\n for fd in self._fds.itervalues():\n try:\n self._poller.unregister(fd._fileno)\n except:\n logger.warning('unregister of %s failed with %s',\n fd._fileno, traceback.format_exc())\n fd._notifier = None\n self._poller = None\n self._timeouts = []\n self._fds = {}\n self.__class__.__instance = None", "metadata": "root._AsyncPoller.terminate", "header": "['class', '_AsyncPoller', '(', 'object', ')', ':', '___EOS___']", "index": 1774 }, { "content": " def hot_swap(self, target, args, kwargs):\n \"\"\"Replaces coro's generator function with given target(args, *kwargs).\n\n The new generator starts executing from the beginning. If\n there are any pending messages, they will not be reset, so new\n generator can process them (or clear them with successive\n 'receive' calls with timeout=0 until it returns\n 'alarm_value').\n \"\"\"\n try:\n generator = Coro.__get_generator(self, target, args, *kwargs)\n except:\n logger.warning('%s is not a generator!', target.__name__)\n return -1\n self._swap_generator = generator\n return Coro._asyncoro._swap_generator(self)", "metadata": "root.Coro.hot_swap", "header": "['class', 'Coro', '(', 'object', ')', ':', '___EOS___']", "index": 2516 }, { "content": " def __init__(self, name, transform=None):\n \"\"\"'name' must be unique across all channels.\n\n 'transform' is a function that can either filter or\n transform a message. If the function returns 'None', the\n message is filtered (ignored). The function is called with\n first parameter set to channel name and second parameter set\n to the message.\n \"\"\"\n\n if not Channel._asyncoro:\n Channel._asyncoro = AsynCoro.instance()\n self._name = name\n self._location = Channel._asyncoro._location\n if transform is not None:\n try:\n argspec = inspect.getargspec(transform)\n assert len(argspec.args) == 2\n except:\n logger.warning('invalid \"transform\" function ignored')\n transform = None\n self._transform = transform\n self._subscribers = set()\n self._subscribe_event = Event()\n Channel._asyncoro._lock.acquire()\n if name in Channel._asyncoro._channels:\n Channel._asyncoro._lock.release()\n logger.warning('duplicate channel \"%s\"!', name)\n else:\n Channel._asyncoro._channels[name] = self\n Channel._asyncoro._lock.release()", "metadata": "root.Channel.__init__", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2659 }, { "content": " def set_transform(self, transform):\n if self._location != Channel._asyncoro._location:\n return -1\n try:\n argspec = inspect.getargspec(transform)\n assert len(argspec.args) == 2\n except:\n logger.warning('invalid \"transform\" function ignored')\n return -1\n self._transform = transform\n return 0", "metadata": "root.Channel.set_transform", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2747 }, { "content": " def send(self, message):\n \"\"\"Message is sent to currently registered subscribers.\n\n Can also be used on remote channels.\n \"\"\"\n if self._location == Channel._asyncoro._location:\n if self._transform:\n try:\n message = self._transform(self._name, message)\n except:\n message = None\n if message is None:\n return 0\n invalid = []\n for subscriber in self._subscribers:\n if subscriber.send(message) != 0:\n invalid.append(subscriber)\n if invalid:\n def _unsub(self, subscriber, coro=None):\n logger.debug('remote subscriber %s is not valid; unsubscribing it', subscriber)\n yield self.unsubscribe(subscriber)\n for subscriber in invalid:\n Coro(_unsub, self, subscriber)\n else:\n # remote channel\n request = _NetRequest('send', kwargs={'channel': self._name, 'message': message},\n dst=self._location, timeout=5)\n # request is queued for asynchronous processing\n if _Peer.send_req(request) != 0:\n logger.warning('remote channel at %s may not be valid', self._location)\n return -1\n return 0", "metadata": "root.Channel.send", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2842 }, { "content": " def deliver(self, message, timeout=None, n=0):\n \"\"\"Must be used with 'yield' as 'rcvd = yield channel.deliver(message)'.\n\n Blocking 'send': Wait until message can be delivered to at\n least 'n' subscribers before timeout. Returns number of\n end-point recipients (coroutines) the message is delivered to;\n i.e., in case of heirarchical channels, it is the sum of\n recipients of all the channels.\n\n Can also be used on remote channels.\n \"\"\"\n if not isinstance(n, int) or n < 0:\n raise StopIteration(-1)\n if self._location == Channel._asyncoro._location:\n if self._transform:\n try:\n message = self._transform(self._name, message)\n except:\n message = None\n if message is None:\n raise StopIteration(0)\n if n:\n while len(self._subscribers) < n:\n start = _time()\n self._subscribe_event.clear()\n if (yield self._subscribe_event.wait(timeout)) is False:\n raise StopIteration(0)\n if timeout is not None:\n timeout -= _time() - start\n if timeout <= 0:\n raise StopIteration(0)\n # during delivery, _subscribers may change, so make copy\n subscribers = list(self._subscribers)\n info = {'reply': 0, 'pending': len(subscribers), 'success': 0,\n 'done': Event(), 'invalid': []}\n\n def _deliver(subscriber, info, timeout, n, coro=None):\n try:\n reply = yield subscriber.deliver(message, timeout=timeout)\n if reply > 0:\n info['reply'] += reply\n info['success'] += 1\n if n > 0 and info['success'] >= n:\n info['done'].set()\n elif reply < 0:\n info['invalid'].append(subscriber)\n except:\n pass\n info['pending'] -= 1\n if info['pending'] == 0:\n info['done'].set()\n for subscriber in subscribers:\n if isinstance(subscriber, Coro) and self._location == subscriber._location:\n if subscriber.send(message) == 0:\n info['reply'] += 1\n info['success'] += 1\n info['pending'] -= 1\n else:\n # channel/remote coro\n Coro(_deliver, subscriber, info, timeout, n)\n if info['pending'] == 0:\n info['done'].set()\n if n == 0 or info['success'] < n:\n yield info['done'].wait(timeout)\n\n if info['invalid']:\n def _unsub(self, subscriber, coro=None):\n logger.debug('remote subscriber %s is not valid; unsubscribing it', subscriber)\n yield self.unsubscribe(subscriber)\n for subscriber in info['invalid']:\n Coro(_unsub, self, subscriber)\n\n raise StopIteration(info['reply'])\n else:\n # remote channel\n request = _NetRequest('deliver', kwargs={'channel': self._name, 'message': message,\n 'n': n},\n dst=self._location, timeout=timeout)\n request.reply = -1\n reply = yield Channel._asyncoro._sync_reply(request, alarm_value=0)\n if reply is None:\n reply = -1\n # if reply < 0:\n # logger.warning('remote channel \"%s\" at %s may have gone away!',\n # self._name, self._location)\n raise StopIteration(reply)", "metadata": "root.Channel.deliver", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2875 }, { "content": " def _schedule(self):\n \"\"\"Internal use only.\n \"\"\"\n while not self._quit:\n # process I/O events\n self._notifier.poll(0)\n self._lock.acquire()\n if not self._scheduled:\n if self._timeouts:\n timeout = self._timeouts[0][0] - _time()\n else:\n timeout = None\n self._polling = True\n self._lock.release()\n self._notifier.poll(timeout)\n self._lock.acquire()\n self._polling = False\n if self._timeouts:\n # wake up timed suspends; pollers may timeout slightly\n # earlier, so give a bit of slack\n now = _time() + 0.0001\n while self._timeouts and self._timeouts[0][0] <= now:\n timeout, cid, alarm_value = heappop(self._timeouts)\n assert timeout <= now\n coro = self._coros.get(cid, None)\n if not coro or coro._timeout != timeout:\n continue\n if coro._state not in (AsynCoro._AwaitIO_, AsynCoro._Suspended,\n AsynCoro._AwaitMsg_):\n logger.warning('coro %s/%s is in state %s for resume; ignored',\n coro._name, coro._id, coro._state)\n continue\n coro._timeout = None\n self._suspended.discard(cid)\n self._scheduled.add(cid)\n coro._state = AsynCoro._Scheduled\n coro._value = alarm_value\n scheduled = [self._coros[cid] for cid in self._scheduled]\n self._lock.release()\n\n for coro in scheduled:\n coro._state = AsynCoro._Running\n AsynCoro.__cur_coro = coro\n\n try:\n if coro._exceptions:\n exc = coro._exceptions.pop(0)\n if exc[0] == GeneratorExit:\n # assert str(exc[1]) == 'close'\n coro._generator.close()\n retval = coro._value\n else:\n retval = coro._generator.throw(exc)\n else:\n retval = coro._generator.send(coro._value)\n except:\n self._lock.acquire()\n exc = sys.exc_info()\n if exc[0] == StopIteration:\n v = exc[1].args\n if v:\n if len(v) == 1:\n coro._value = v[0]\n else:\n coro._value = v\n coro._exceptions = []\n elif exc[0] == HotSwapException:\n v = exc[1].args\n if isinstance(v, tuple) and len(v) == 1 and inspect.isgenerator(v[0]) and \\\n coro._hot_swappable and not coro._callers:\n try:\n coro._generator.close()\n except:\n logger.warning('closing %s/%s raised exception: %s',\n coro._name, coro._id, traceback.format_exc())\n coro._generator = v[0]\n coro._name = coro._generator.__name__\n coro._exceptions = []\n coro._value = None\n # coro._msgs is not reset, so new\n # coroutine can process pending messages\n coro._state = AsynCoro._Scheduled\n else:\n logger.warning('invalid HotSwapException from %s/%s ignored',\n coro._name, coro._id)\n self._lock.release()\n continue\n else:\n coro._exceptions.append(exc)\n\n if coro._callers:\n # return to caller\n caller = coro._callers.pop(-1)\n coro._generator = caller[0]\n if coro._swap_generator and not coro._callers and coro._hot_swappable:\n coro._exceptions.append((HotSwapException,\n HotSwapException(coro._swap_generator)))\n coro._swap_generator = None\n coro._state = AsynCoro._Scheduled\n elif coro._exceptions:\n # exception in callee, restore saved value\n coro._value = caller[1]\n self._suspended.discard(coro._id)\n self._scheduled.add(coro._id)\n coro._state = AsynCoro._Scheduled\n elif coro._state == AsynCoro._Running:\n coro._state = AsynCoro._Scheduled\n else:\n if coro._exceptions:\n exc = coro._exceptions[0]\n assert isinstance(exc, tuple)\n if len(exc) == 2:\n exc = ''.join(traceback.format_exception_only(exc))\n else:\n exc = ''.join(traceback.format_exception(exc))\n logger.warning('uncaught exception in %s:\\n%s', coro, exc)\n try:\n coro._generator.close()\n except:\n logger.warning('closing %s raised exception: %s',\n coro._name, traceback.format_exc())\n # delete this coro\n if coro._state not in (AsynCoro._Scheduled, AsynCoro._Running):\n logger.warning('coro \"%s\" is in state: %s', coro._name, coro._state)\n monitors = list(coro._monitors)\n for monitor in monitors:\n if monitor._location == self._location:\n if coro._exceptions:\n exc = MonitorException(coro, coro._exceptions[0])\n else:\n exc = MonitorException(coro, (StopIteration, coro._value))\n if self._coros.get(monitor._id, None) == monitor:\n monitor.send(exc)\n else:\n logger.warning('monitor for %s/%s has gone away!',\n coro._name, coro._id)\n coro._monitors.discard(monitor)\n else:\n # remote monitor; prepare serializable data\n if coro._exceptions:\n exc = coro._exceptions[0][:2]\n try:\n serialize(exc[1])\n except pickle.PicklingError:\n # send only the type\n exc = (exc[0], type(exc[1].args[0]))\n exc = MonitorException(coro, exc)\n coro._exceptions = []\n else:\n exc = coro._value\n try:\n serialize(exc)\n except pickle.PicklingError:\n exc = type(exc)\n exc = MonitorException(coro, (StopIteration, exc))\n monitor.send(exc)\n if not coro._monitors or not coro._exceptions:\n coro._msgs.clear()\n coro._monitors.clear()\n coro._exceptions = []\n if self._coros.pop(coro._id, None) != coro:\n logger.warning('invalid coro: %s, %s', coro._id, coro._state)\n if coro._daemon is True:\n self._daemons -= 1\n elif coro._monitors:\n # a (local) monitor can restart it with hot_swap\n coro._hot_swappable = True\n coro._exceptions = []\n coro._state = None\n coro._generator = None\n if coro._complete:\n coro._complete.set()\n else:\n coro._complete = 0\n self._scheduled.discard(coro._id)\n if len(self._coros) == self._daemons:\n self._complete.set()\n self._lock.release()\n else:\n self._lock.acquire()\n if coro._state == AsynCoro._Running:\n coro._state = AsynCoro._Scheduled\n # if this coroutine is suspended, don't update\n # the value; when it is resumed, it will be\n # updated with the 'update' value\n coro._value = retval\n\n if isinstance(retval, types.GeneratorType):\n # push current generator onto stack and activate\n # new generator\n coro._callers.append((coro._generator, coro._value))\n coro._generator = retval\n coro._value = None\n self._lock.release()\n AsynCoro.__cur_coro = None\n\n self._lock.acquire()\n for coro in self._coros.itervalues():\n logger.debug('terminating Coro %s/%s%s', coro._name, coro._id,\n ' (daemon)' if coro._daemon else '')\n AsynCoro.__cur_coro = coro\n coro._state = AsynCoro._Running\n while coro._generator:\n try:\n coro._generator.close()\n except:\n logger.warning('closing %s raised exception: %s',\n coro._generator.__name__, traceback.format_exc())\n if coro._callers:\n coro._generator, coro._value = coro._callers.pop(-1)\n else:\n coro._generator = None\n if coro._complete:\n coro._complete.set()\n else:\n coro._complete = 0\n self._scheduled = set()\n self._suspended = set()\n self._timeouts = []\n self._coros = {}\n self._channels = {}\n self.__class__.__instance = None\n self._quit = True\n self._notifier.terminate()\n self._lock.release()\n logger.debug('AsynCoro %sterminated', ('%s ' % self._location) if self._location else '')\n while self._atexit:\n func, fargs, fkwargs = self._atexit.pop()\n try:\n func(fargs, fkwargs)\n except:\n logger.warning('running %s failed:', func.__name__)\n logger.warning(traceback.format_exc())\n self._complete.set()\n logger.shutdown()\n time.sleep(0.1)", "metadata": "root.AsynCoro._schedule", "header": "['class', 'AsynCoro', '(', 'object', ')', ':', '___EOS___']", "index": 3354 }, { "content": " def _tasklet(self):\n while 1:\n item = self._task_queue.get(block=True)\n if item is None:\n self._task_queue.task_done()\n break\n coro, target, args, kwargs = item\n try:\n val = target(args, *kwargs)\n coro._proceed_(val)\n except:\n coro.throw(sys.exc_info())\n finally:\n self._task_queue.task_done()", "metadata": "root.AsyncThreadPool._tasklet", "header": "['class', 'AsyncThreadPool', '(', 'object', ')', ':', '___EOS___']", "index": 3685 } ]	[ { "span": "except:", "start_line": 872, "start_column": 4, "end_line": 872, "end_column": 11 }, { "span": "except:", "start_line": 377, "start_column": 12, "end_line": 377, "end_column": 19 }, { "span": "except:", "start_line": 428, "start_column": 12, "end_line": 428, "end_column": 19 }, { "span": "except:", "start_line": 503, "start_column": 12, "end_line": 503, "end_column": 19 }, { "span": "except:", "start_line": 535, "start_column": 12, "end_line": 535, "end_column": 19 }, { "span": "except:", "start_line": 559, "start_column": 12, "end_line": 559, "end_column": 19 }, { "span": "except:", "start_line": 600, "start_column": 12, "end_line": 600, "end_column": 19 }, { "span": "except:", "start_line": 668, "start_column": 20, "end_line": 668, "end_column": 27 }, { "span": "except:", "start_line": 692, "start_column": 16, "end_line": 692, "end_column": 23 }, { "span": "except:", "start_line": 738, "start_column": 20, "end_line": 738, "end_column": 27 }, { "span": "except:", "start_line": 757, "start_column": 16, "end_line": 757, "end_column": 23 }, { "span": "except:", "start_line": 1472, "start_column": 24, "end_line": 1472, "end_column": 31 }, { "span": "except:", "start_line": 1556, "start_column": 24, "end_line": 1556, "end_column": 31 }, { "span": "except:", "start_line": 1731, "start_column": 12, "end_line": 1731, "end_column": 19 }, { "span": "except:", "start_line": 1763, "start_column": 12, "end_line": 1763, "end_column": 19 }, { "span": "except:", "start_line": 1784, "start_column": 16, "end_line": 1784, "end_column": 23 }, { "span": "except:", "start_line": 2527, "start_column": 8, "end_line": 2527, "end_column": 15 }, { "span": "except:", "start_line": 2677, "start_column": 12, "end_line": 2677, "end_column": 19 }, { "span": "except:", "start_line": 2753, "start_column": 8, "end_line": 2753, "end_column": 15 }, { "span": "except:", "start_line": 2851, "start_column": 16, "end_line": 2851, "end_column": 23 }, { "span": "except:", "start_line": 2921, "start_column": 16, "end_line": 2921, "end_column": 23 }, { "span": "except:", "start_line": 3409, "start_column": 16, "end_line": 3409, "end_column": 23 }, { "span": "except:", "start_line": 3426, "start_column": 28, "end_line": 3426, "end_column": 35 }, { "span": "except:", "start_line": 3472, "start_column": 28, "end_line": 3472, "end_column": 35 }, { "span": "except:", "start_line": 3559, "start_column": 16, "end_line": 3559, "end_column": 23 }, { "span": "except:", "start_line": 3584, "start_column": 12, "end_line": 3584, "end_column": 19 }, { "span": "except:", "start_line": 3695, "start_column": 12, "end_line": 3695, "end_column": 19 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\"\"\"", "\\", "10", 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"\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u", "author\\u\\u_", "=_", "\"", "Gir", "id", "har", " ", "Pe", "mma", "sani", " ", "(", "pg", "iri", "@", "ya", "hoo", ".", "com", ")\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "email\\u\\u_", "=_", "\"", "pg", "iri", "@", "ya", "hoo", ".", "com", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "copyright\\u\\u_", "=_", "\"", "Copy", "right", " ", "(", "c", ")", " ", "2012", "-", "2014", " ", "Gir", "id", "har", " ", "Pe", "mma", "sani", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "contributor", "s\\u\\u_", "=_", "[_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "maintainer\\u\\u_", "=_", "\"", "Gir", "id", "har", " ", "Pe", "mma", "sani", " ", "(", "pg", "iri", "@", "ya", "hoo", ".", "com", ")\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "license\\u\\u_", "=_", "\"", "MIT", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "url", "\\u\\u_", "=_", "\"", "http", "://", "async", "oro", ".", "sourcef", "org", "e", ".", "net", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "status\\u\\u_", "=_", "\"", "Product", "ion", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u", "version\\u\\u_", "=_", "\"", "4.0", "\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u", "all\\u\\u_", "=_", "[_", "'", "Async", "Sock", "et", "'_", ",_", "'", "As", "yn", "Cor", "o", "Sock", "et", "'_", ",_", "'", "Cor", "o", "'_", ",_", "'", "As", "yn", "Cor", "o", "'_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "'", "Lock", "'_", ",_", "'", "RL", "ock", "'_", ",_", "'", "Event", "'_", ",_", "'", "Cond", "ition", "'_", ",_", "'", "Semaphore", "'_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "'", "Hot", "Swa", "p", "Except", "ion", "'_", ",_", "'", "Monitor", "Except", "ion", "'_", ",_", "'", "Locat", "ion", "'_", ",_", "'", "Chan", "nel", "'_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "'", "Categori", "ze", "Messag", "es", "'_", ",_", "'", "Async", "Thread", "Poo", "l", "'_", ",_", "'", "Async", "DB", "Curs", "or", "'_", ",_", "\\u\\u\\uNL\\u\\u\\u_", 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Unused import	IEEERobotics/bot/bot/hardware/complex_hardware/ArmCommandLine.py	[ { "content": "import os \nimport sys \nfrom time import sleep \nimport bot.lib.lib as lib \nfrom robot_arm import RobotArm \nfrom QRCode2 import QRCode2\n\nbot_config = lib.get_config()\narm_config = bot_config[\"dagu_arm\"]\narm = RobotArm(arm_config)\n\n\nwhile True:\n print \"Commands: \" \n print \"1: Set Angles\"\n print \"2: Move to hopper pos\"\n print \"3: Set Hopper\" \n print \"4: Empty hopper\" \n print \"5: Calibrate rail\"\n print \"6: Pinch \"\n print \"7: Let go \"\n print \"8: Reset the arm and rail\"\n print \"9: Check color in bin\"\n print \"10: Tier Grab \"\n print \"11: Turn Light On \"\n print \"12: Turn Light Off \"\n print \"13: Grab QR \"\n print \"14: Grab Color \" \n print \"15: Find block with IR\"\n print \"16: Check Hopper Colors\"\n \n\n Command = input(\"Command: \")\n if Command == 16:\n arm.check_hopper()\n \n if Command == 15:\n arm.FindBlockWithIR() \n \n if Command == 13: \n arm.GrabQR()\n \n if Command == 14:\n arm.GrabColor() \n \n if Command == 12:\n arm.TurnOffLight()\n \n if Command == 11:\n \n arm.TurnOnLight()\n \n if Command == 10:\n arm.competition_solver_barge('B') \n \n if Command == -1: \n print \"Good Bye!\"\n break\n \n if Command == 1:\n arm.demo_set_angles()\n \n if Command == 2:\n Pos = input(\"which bin to go to: \")\n arm.rail.Orientor(Pos)\n \n if Command == 3:\n i = 0\n while i < 4:\n Color = raw_input(\"Block color: \") \n qr = QRCode2(0,Color,0)\n arm.hopper[i]=qr \n i=i+1 \n \n if Command == 4:\n Color = raw_input(\"Which color: \")\n arm.reset_home_position() \n arm.FindAndGetBlock(Color)\n \n if Command == 5:\n arm.rail.CalibrateRail() \n \n if Command == 6: \n arm.grab()\n \n if Command == 7:\n arm.release()\n \n if Command == 8:\n arm.reset_home_position()\n \n if Command == 9: \n \n arm.check_hopper()\n print arm.hopper \n \n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "import os 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Except block handles 'BaseException'	mikemaccana/imeveryone/usermessages.py	[ { "content": " def makepreviewpic(self,imagefile,imageconfig):\n '''Reduce images larger than a certain size'''\n myimage = Image.open(imagefile)\n width,height = myimage.size\n aspect = float(width) / float(height)\n maxwidth = imageconfig.as_int('maxwidth')\n maxheight = imageconfig.as_int('maxheight')\n maxsize = (maxwidth,maxheight)\n # Don't bother if image is already smaller\n if width < maxwidth and height < maxheight:\n logging.info('Small image, using existing pic at: '+imagefile)\n self.preview = imagefile\n # Resize, save, return preview file name\n else:\n myimage.thumbnail(maxsize,Image.ANTIALIAS)\n newfilename = imagefile.replace('cache','thumbs').split('.')[-2]+'_preview.'+imagefile.split('.')[-1]\n try:\n myimage.save(newfilename)\n logging.info('Saved preview pic to: '+newfilename)\n self.preview = newfilename\n except:\n pass\n return", "metadata": "root.Message.makepreviewpic", "header": "['class', 'Message', '(', 'object', ')', ':', '___EOS___']", "index": 255 }, { "content": " def checklinksandembeds(self,config):\n '''Process any links in the text'''\n maxwidth = config['images'].as_int('maxwidth')\n maxheight = config['images'].as_int('maxheight')\n linkre = re.compile(r\"(http://[^ ]+)\")\n for link in linkre.findall(self.posttext):\n # lopp through links gettng embeds\n logging.info('Getting embed data for link: '+link)\n try:\n self.embedcode = getembedcode(link, maxwidth=maxwidth, maxheight=maxheight)\n if self.embedcode:\n logging.info('Embed data found!')\n else:\n logging.info('Embed data not found!') \n except:\n logging.warn('Getting embed data for link failed - most likely embedly 404')\n pass\n self.original = self.posttext\n self.posttext = linkre.sub('', self.posttext)\n return", "metadata": "root.Message.checklinksandembeds", "header": "['class', 'Message', '(', 'object', ')', ':', '___EOS___']", "index": 331 }, { "content": " def checkporn(self,config):\n '''Check images for porn'''\n def savegrayscale(imagefile):\n '''Convert image to greyscale and save'''\n adultimage = Image.open(imagefile)\n adultimage = ImageOps.grayscale(adultimage)\n adultimage.save(imagefile)\n return\n if self.localfile and config['images'].as_bool('enabled') and config['images'].as_bool('adult'):\n count = 1\n response = {}\n while count < 3:\n try:\n logging.info('Checking for porn, try '+str(count))\n response = pifilter.checkimage(\n self.localfile,\n config['posting']['pifilter']['customerid'],\n aggressive = config['posting']['pifilter'].as_bool('aggressive')\n )\n break\n except:\n logging.error('Could not open pifilter URL')\n time.sleep(5)\n count = count+1\n if 'result' in response:\n if response['result']:\n logging.warn('message submission '+str(self._id)+' with image '+self.localfile+' is porn.')\n # Make a greyscale version and use that instead\n if config['images']['adultaction'] in ['gray','grey']:\n savegrayscale(self.localfile)\n logging.info('Saving greyscale version...')\n else:\n self.useralerts.append(config['alerts']['porn'])\n else:\n logging.info('image is clean')\n else:\n # No response from pifilter\n pass\n return", "metadata": "root.Message.checkporn", "header": "['class', 'Message', '(', 'object', ')', ':', '___EOS___']", "index": 352 } ]	[ { "span": "except:", "start_line": 275, "start_column": 12, "end_line": 275, "end_column": 19 }, { "span": "except:", "start_line": 345, "start_column": 12, "end_line": 345, "end_column": 19 }, { "span": "except:", "start_line": 372, "start_column": 16, "end_line": 372, "end_column": 23 } ]	[]	1	true	[ "[CLS]_", "Except", "_", "block_", "handles_", "'", "Base", "Except", "ion", "'_", "[SEP]_", "class_", "Message_", "(_", "object_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "makep", "review", "pic_", "(_", "self_", ",_", "imagef", "ile_", ",_", "image", "config_", ")_", ":_", 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Unused import	Nordeus/pushkin/pushkin/tests/test_server_json.py	[ { "content": "import pytest\nfrom pushkin import pushkin_cli\nimport tornado.web\nfrom pushkin import context\nfrom pushkin.database import database\nfrom pushkin.request.request_processor import RequestProcessor\nfrom pushkin.requesthandlers.events import JsonEventHandler\nfrom pushkin.requesthandlers.notifications import JsonNotificationHandler\nfrom pushkin import test_config_ini_path\nfrom pushkin import config\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "@pytest.fixture\ndef setup_database():\n database.create_database()", "metadata": "root.setup_database", "header": "['module', '___EOS___']", "index": 12 }, { "content": "@pytest.fixture\ndef mock_processor(mocker):\n '''Mock request processor'''\n mocker.patch('pushkin.request.request_processor.RequestProcessor.submit')\n mocker.patch('pushkin.context.main_logger')", "metadata": "root.mock_processor", "header": "['module', '___EOS___']", "index": 17 }, { "content": "@pytest.fixture\ndef app():\n pushkin_cli.CONFIGURATION_FILENAME = test_config_ini_path\n pushkin_cli.init()\n return pushkin_cli.create_app()", "metadata": "root.app", "header": "['module', '___EOS___']", "index": 24 }, { "content": "@pytest.fixture\ndef notification_batch_json():\n ''' Return a valid json request '''\n return '''\n {\n \"notifications\": [\n {\n \"login_id\" : 1338,\n \"title\" : \"Msg title\",\n \"content\" : \"Text of a message\",\n \"screen\" : \"some_screen_id\"\n }\n ]\n }\n '''", "metadata": "root.notification_batch_json", "header": "['module', '___EOS___']", "index": 30 }, { "content": "@pytest.fixture\ndef post_notification_url(base_url):\n return base_url + config.json_notification_handler_url", "metadata": "root.post_notification_url", "header": "['module', '___EOS___']", "index": 46 }, { "content": "@pytest.fixture\ndef event_batch_json():\n ''' Return a valid json request '''\n return '''\n {\n \"events\": [\n {\n \"user_id\" : 123,\n \"event_id\" : 1,\n \"timestamp\" : 12345,\n \"pairs\": {\n \"some_constant\" : \"6\",\n \"world_id\" : \"1\"\n }\n }\n ]\n }\n '''", "metadata": "root.event_batch_json", "header": "['module', '___EOS___']", "index": 50 }, { "content": "@pytest.fixture\ndef post_event_url(base_url):\n return base_url + config.json_event_handler_url", "metadata": "root.post_event_url", "header": "['module', '___EOS___']", "index": 70 }, { "content": "@pytest.mark.gen_test\[email protected](\"input\", [\n (''),\n ('asd'),\n])\ndef test_post_notification_empty_request(setup_database, mock_processor, http_client, post_notification_url, input):\n '''Test that server responds with 400 if invalid parameter is supplied to post_notification request'''\n request = tornado.httpclient.HTTPRequest(post_notification_url, method='POST', body=input)\n with pytest.raises(tornado.httpclient.HTTPError):\n yield http_client.fetch(request)\n assert not context.request_processor.submit.called", "metadata": "root.test_post_notification_empty_request", "header": "['module', '___EOS___']", "index": 75 }, { "content": "@pytest.mark.gen_test\ndef test_post_notification(setup_database, mock_processor, http_client, post_notification_url,\n notification_batch_json):\n '''Test that a valid request is succesfully parsed in post_notification'''\n request = tornado.httpclient.HTTPRequest(post_notification_url, method='POST', body=notification_batch_json)\n response = yield http_client.fetch(request)\n assert response.code == 200\n assert context.request_processor.submit.called", "metadata": "root.test_post_notification", "header": "['module', '___EOS___']", "index": 88 }, { "content": "@pytest.mark.gen_test\[email protected](\"input\", [\n (''),\n ('asd'),\n])\ndef test_post_event_empty_request(setup_database, mock_processor, http_client, post_event_url, input):\n '''Test that server responds with 400 if invalid parameter is supplied to post_event request'''\n request = tornado.httpclient.HTTPRequest(post_event_url, method='POST', body=input)\n with pytest.raises(tornado.httpclient.HTTPError):\n yield http_client.fetch(request)\n assert not context.request_processor.submit.called", "metadata": "root.test_post_event_empty_request", "header": "['module', '___EOS___']", "index": 98 }, { "content": "@pytest.mark.gen_test\ndef test_post_event(setup_database, mock_processor, http_client, post_event_url, event_batch_json):\n '''Test that a valid request is succesfully parsed in post_event'''\n context.request_processor.submit.return_value = True\n request = tornado.httpclient.HTTPRequest(post_event_url, method='POST', body=event_batch_json)\n response = yield http_client.fetch(request)\n assert response.code == 200\n assert context.request_processor.submit.called", "metadata": "root.test_post_event", "header": "['module', '___EOS___']", "index": 111 }, { "content": "@pytest.mark.gen_test\ndef test_post_event_service_unavailable(setup_database, mock_processor, http_client, post_event_url, event_batch_json,\n app):\n '''Test that service_unavailable is returned if server load is more that expected'''\n context.request_processor.submit.return_value = False\n request = tornado.httpclient.HTTPRequest(post_event_url, method='POST', body=event_batch_json)\n RequestProcessor.submit.return_value = False\n with pytest.raises(tornado.httpclient.HTTPError):\n yield http_client.fetch(request)", "metadata": "root.test_post_event_service_unavailable", "header": "['module', '___EOS___']", "index": 121 } ]	[ { "span": "from pushkin.requesthandlers.events import JsonEventHandler", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 59 }, { "span": "from pushkin.requesthandlers.notifications import JsonNotificationHandler", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 73 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", 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Unused import	caktus/django-comps/docs/conf.py	[ { "content": "# -- coding: utf-8 --\n#\n# django-comps documentation build configuration file, created by\n# sphinx-quickstart on Wed Jul 25 21:12:10 2012.\n#\n# This file is execfile()d with the current directory set to its containing dir.\n#\n# Note that not all possible configuration values are present in this\n# autogenerated file.\n#\n# All configuration values have a default; values that are commented out\n# serve to show the default.\n\nimport sys, os\n\n# If extensions (or modules to document with autodoc) are in another directory,\n# add these directories to sys.path here. If the directory is relative to the\n# documentation root, use os.path.abspath to make it absolute, like shown here.\n#sys.path.insert(0, os.path.abspath('.'))\n\n# -- General configuration -----------------------------------------------------\n\n# If your documentation needs a minimal Sphinx version, state it here.\n#needs_sphinx = '1.0'\n\n# Add any Sphinx extension module names here, as strings. They can be extensions\n# coming with Sphinx (named 'sphinx.ext.*') or your custom ones.\nextensions = []\n\n# Add any paths that contain templates here, relative to this directory.\ntemplates_path = ['_templates']\n\n# The suffix of source filenames.\nsource_suffix = '.rst'\n\n# The encoding of source files.\n#source_encoding = 'utf-8-sig'\n\n# The master toctree document.\nmaster_doc = 'index'\n\n# General information about the project.\nproject = u'django-comps'\ncopyright = u'2012, David Ray'\n\n# The version info for the project you're documenting, acts as replacement for\n# \|version\| and \|release\|, also used in various other places throughout the\n# built documents.\n#\n# The short X.Y version.\nversion = '0.3'\n# The full version, including alpha/beta/rc tags.\nrelease = '0.3.0'\n\n# The language for content autogenerated by Sphinx. Refer to documentation\n# for a list of supported languages.\n#language = None\n\n# There are two options for replacing \|today\|: either, you set today to some\n# non-false value, then it is used:\n#today = ''\n# Else, today_fmt is used as the format for a strftime call.\n#today_fmt = '%B %d, %Y'\n\n# List of patterns, relative to source directory, that match files and\n# directories to ignore when looking for source files.\nexclude_patterns = ['_build']\n\n# The reST default role (used for this markup: `text`) to use for all documents.\n#default_role = None\n\n# If true, '()' will be appended to :func: etc. cross-reference text.\n#add_function_parentheses = True\n\n# If true, the current module name will be prepended to all description\n# unit titles (such as .. function::).\n#add_module_names = True\n\n# If true, sectionauthor and moduleauthor directives will be shown in the\n# output. They are ignored by default.\n#show_authors = False\n\n# The name of the Pygments (syntax highlighting) style to use.\npygments_style = 'sphinx'\n\n# A list of ignored prefixes for module index sorting.\n#modindex_common_prefix = []\n\n\n# -- Options for HTML output ---------------------------------------------------\n\n# The theme to use for HTML and HTML Help pages. See the documentation for\n# a list of builtin themes.\nhtml_theme = 'default'\n\n# Theme options are theme-specific and customize the look and feel of a theme\n# further. For a list of options available for each theme, see the\n# documentation.\n#html_theme_options = {}\n\n# Add any paths that contain custom themes here, relative to this directory.\n#html_theme_path = []\n\n# The name for this set of Sphinx documents. If None, it defaults to\n# \"<project> v<release> documentation\".\n#html_title = None\n\n# A shorter title for the navigation bar. Default is the same as html_title.\n#html_short_title = None\n\n# The name of an image file (relative to this directory) to place at the top\n# of the sidebar.\n#html_logo = None\n\n# The name of an image file (within the static path) to use as favicon of the\n# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32\n# pixels large.\n#html_favicon = None\n\n# Add any paths that contain custom static files (such as style sheets) here,\n# relative to this directory. They are copied after the builtin static files,\n# so a file named \"default.css\" will overwrite the builtin \"default.css\".\nhtml_static_path = ['_static']\n\n# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,\n# using the given strftime format.\n#html_last_updated_fmt = '%b %d, %Y'\n\n# If true, SmartyPants will be used to convert quotes and dashes to\n# typographically correct entities.\n#html_use_smartypants = True\n\n# Custom sidebar templates, maps document names to template names.\n#html_sidebars = {}\n\n# Additional templates that should be rendered to pages, maps page names to\n# template names.\n#html_additional_pages = {}\n\n# If false, no module index is generated.\n#html_domain_indices = True\n\n# If false, no index is generated.\n#html_use_index = True\n\n# If true, the index is split into individual pages for each letter.\n#html_split_index = False\n\n# If true, links to the reST sources are added to the pages.\n#html_show_sourcelink = True\n\n# If true, \"Created using Sphinx\" is shown in the HTML footer. Default is True.\n#html_show_sphinx = True\n\n# If true, \"(C) Copyright ...\" is shown in the HTML footer. Default is True.\n#html_show_copyright = True\n\n# If true, an OpenSearch description file will be output, and all pages will\n# contain a <link> tag referring to it. The value of this option must be the\n# base URL from which the finished HTML is served.\n#html_use_opensearch = ''\n\n# This is the file name suffix for HTML files (e.g. \".xhtml\").\n#html_file_suffix = None\n\n# Output file base name for HTML help builder.\nhtmlhelp_basename = 'django-compsdoc'\n\n\n# -- Options for LaTeX output --------------------------------------------------\n\nlatex_elements = {\n# The paper size ('letterpaper' or 'a4paper').\n#'papersize': 'letterpaper',\n\n# The font size ('10pt', '11pt' or '12pt').\n#'pointsize': '10pt',\n\n# Additional stuff for the LaTeX preamble.\n#'preamble': '',\n}\n\n# Grouping the document tree into LaTeX files. List of tuples\n# (source start file, target name, title, author, documentclass [howto/manual]).\nlatex_documents = [\n ('index', 'django-comps.tex', u'django-comps Documentation',\n u'David Ray', 'manual'),\n]\n\n# The name of an image file (relative to this directory) to place at the top of\n# the title page.\n#latex_logo = None\n\n# For \"manual\" documents, if this is true, then toplevel headings are parts,\n# not chapters.\n#latex_use_parts = False\n\n# If true, show page references after internal links.\n#latex_show_pagerefs = False\n\n# If true, show URL addresses after external links.\n#latex_show_urls = False\n\n# Documents to append as an appendix to all manuals.\n#latex_appendices = []\n\n# If false, no module index is generated.\n#latex_domain_indices = True\n\n\n# -- Options for manual page output --------------------------------------------\n\n# One entry per manual page. List of tuples\n# (source start file, name, description, authors, manual section).\nman_pages = [\n ('index', 'django-comps', u'django-comps Documentation',\n [u'David Ray'], 1)\n]\n\n# If true, show URL addresses after external links.\n#man_show_urls = False\n\n\n# -- Options for Texinfo output ------------------------------------------------\n\n# Grouping the document tree into Texinfo files. List of tuples\n# (source start file, target name, title, author,\n# dir menu entry, description, category)\ntexinfo_documents = [\n ('index', 'django-comps', u'django-comps Documentation',\n u'David Ray', 'django-comps', 'A rapid prototyping facilitator.',\n 'Miscellaneous'),\n]\n\n# Documents to append as an appendix to all manuals.\n#texinfo_appendices = []\n\n# If false, no module index is generated.\n#texinfo_domain_indices = True\n\n# How to display URL addresses: 'footnote', 'no', or 'inline'.\n#texinfo_show_urls = 'footnote'\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "import sys, os", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 14 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "--", " ", "codi", "ng", ":", " ", "utf", "-", "8", " ", "--", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", "_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "django", "-", "comps", " ", 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Insecure temporary file	binhex/moviegrabber/lib/site-packages/Cheetah/FileUtils.py	[ { "content": " def __init__(self, files, patternOrRE, replacement,\n recordResults=True):\n\n \n if isinstance(patternOrRE, basestring):\n self._regex = re.compile(patternOrRE)\n else:\n self._regex = patternOrRE\n if isinstance(replacement, basestring):\n self._subber = _GenSubberFunc(replacement).subberFunc()\n else:\n self._subber = replacement\n\n self._pattern = pattern = self._regex.pattern\n self._files = files\n self._results = {}\n self._recordResults = recordResults\n\n ## see if we should use pgrep to do the file matching\n self._usePgrep = False\n if (os.popen3('pgrep')[2].read()).startswith('Usage:'):\n ## now check to make sure pgrep understands the pattern\n tmpFile = mktemp()\n open(tmpFile, 'w').write('#')\n if not (os.popen3('pgrep \"' + pattern + '\" ' + tmpFile)[2].read()):\n # it didn't print an error msg so we're ok\n self._usePgrep = True\n os.remove(tmpFile)\n\n self._run()", "metadata": "root.FindAndReplace.__init__", "header": "['class', 'FindAndReplace', ':', '___EOS___']", "index": 220 } ]	[ { "span": "mktemp()", "start_line": 242, "start_column": 22, "end_line": 242, "end_column": 30 } ]	[]	1	true	[ "[CLS]_", "Inse", "cure", "_", "temporar", "y_", "file_", "[SEP]_", "class_", "Fin", "d", "And", "Replace", "_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "def_", "\\u\\u", "init\\u\\u_", "(_", "self_", ",_", "files_", ",_", "pattern", "Or", "RE_", ",_", "replacement_", ",_", "\\u\\u\\uNL\\u\\u\\u_", "record", "Results_", "=_", "True_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "if_", "isinstance_", "(_", "pattern", "Or", "RE_", ",_", "basestring_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "\\u", "regex_", "=_", "re_", "._", "compile_", "(_", "pattern", "Or", "RE_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", 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Variable defined multiple times	CollabQ/CollabQ/settings.py	[ { "content": "# Copyright 2009 Google Inc.\n# Copyright 2010 http://www.collabq.com\n\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\nimport re\nimport os\nimport os.path\nimport sys\n\n# for python 2.6\nif sys.version.startswith('2.6'):\n import logging\n logging.logMultiprocessing = 0\n\n\nROOT_PATH = os.path.dirname(__file__)\n\n###\n# Django related settings\n###\n\nDEBUG = False\nTEMPLATE_DEBUG = DEBUG\n\nADMINS = (\n ('Jose Maria Zambrana Arze', '[email protected]'),\n)\n\nMANAGERS = ADMINS\n\n#POBoxPress owner Settings\n# TODO(zero): review this\nADMINS_POBOX = []\nCREATE_CHANNELS_FROM_POSTS = False\n\n# This stuff is always going to be the same for an App Engine instance\nDATABASE_ENGINE = 'appengine' # 'appengine' is the only supported engine\nDATABASE_NAME = '' # Not used with appengine\nDATABASE_USER = '' # Not used with appengine\nDATABASE_PASSWORD = '' # Not used with appengine\nDATABASE_HOST = '' # Not used with appengine\nDATABASE_PORT = '' # Not used with appengine\n\n# The appengine_django code doesn't care about the address of memcached\n# because it is a built in API for App Engine\nCACHE_BACKEND = 'memcached://'\n\n# Local time zone for this installation. Choices can be found here:\n# http://en.wikipedia.org/wiki/List_of_tz_zones_by_name\n# although not all choices may be available on all operating systems.\n# If running in a Windows environment this must be set to the same as your\n# system time zone.\nTIME_ZONE = 'UTC-8'\n\n# Language code for this installation. All choices can be found here:\n# http://www.i18nguy.com/unicode/language-identifiers.html\nLANGUAGE_CODE = 'en-us'\n\n# If you set this to False, Django will make some optimizations so as not\n# to load the internationalization machinery.\nUSE_I18N = True\n\n# Make this unique, and don't share it with anybody.\nSECRET_KEY = '8066e3870fb8eacf192789c415a0a3e8'\n\n# List of callables that know how to import templates from various sources.\nTEMPLATE_LOADERS = (\n 'django.template.loaders.filesystem.load_template_source',\n 'django.template.loaders.app_directories.load_template_source',\n # 'django.template.loaders.eggs.load_template_source',\n)\n\nMIDDLEWARE_CLASSES = (\n 'middleware.domain.DomainMiddleware',\n 'middleware.auth.AuthenticationMiddleware',\n 'middleware.exception.ExceptionMiddleware',\n 'middleware.verify.VerifyInstallMiddleware',\n 'middleware.cache.CacheMiddleware',\n 'middleware.strip_whitespace.WhitespaceMiddleware',\n 'middleware.profile.ProfileMiddleware',\n)\n\nROOT_URLCONF = 'urls'\n\n# The default theme to use\nDEFAULT_THEME = 'innogems'\nTHEME_TEMPLATES = os.path.join(os.path.join(ROOT_PATH, 'templates'), DEFAULT_THEME)\n\n# Where the templates live, you probably don't want to change this unless you\n# know what you're doing\nTEMPLATE_DIRS = (\n THEME_TEMPLATES,\n ROOT_PATH,\n)\n\n\nTEMPLATE_CONTEXT_PROCESSORS = (\n 'django.core.context_processors.debug',\n 'django.core.context_processors.request',\n 'common.context_processors.settings',\n 'common.context_processors.flash',\n 'common.context_processors.components',\n)\n\n# Only apps under INSTALLED_APPS will be automatically tested via \n# `python manage.py test` and the profiling code takes this list into\n# account while filtering calls\nINSTALLED_APPS = (\n 'appengine_django',\n 'common',\n 'actor',\n 'api',\n 'channel',\n 'explore',\n 'join',\n 'flat',\n 'login',\n 'front',\n 'invite',\n 'confirm',\n 'components',\n)\n\n# We override the default test runner so that we can be Totally Awesome\nTEST_RUNNER = 'common.test.runner.run_tests'\n\n\n####\n#\n# Below this is custom for CollabQ (not related to Django)\n#\n####\n\n\n# This is a dynamic setting so that we can check whether we have been run\n# locally, it is used mainly for making special testing-only tweaks. Ideally\n# we wouldn't need this, but the alternatives so far have been tricky.\nMANAGE_PY = os.path.exists('manage.py')\n\n# This is the colloquial name for an entry, mostly used for branding purposes\nPOST_NAME = 'xpress'\n\n\n\n# This is the domain where this is installed on App Engine. It will be\n# necessary to know this if you plan on enabling SSL for login and join.\nAPP_ID = 'collabq'\nGAE_DOMAIN = '%s.appspot.com' % APP_ID\nNS_DOMAIN = GAE_DOMAIN\n\n# Enabling this means we expect to be spending most of our time on a \n# Hosted domain\nHOSTED_DOMAIN_ENABLED = False\n\n# This is the domain you intend to serve your site from, when using hosted\n# domains. If SSL is enabled for login and join those requests will still \n# go to the GAE_DOMAIN above.\nHOSTED_DOMAIN = 'example.com'\n\n# App Engine requires you to serve with a subdomain\nDEFAULT_HOSTED_SUBDOMAIN = 'www'\n\n# DOMAIN will be used wherever a url to this site needs to be created\n# NS_DOMAIN will be used as the domain part of actor identifiers. \n# Note that changing this once you have deployed the site will likely result \n# in catastrophic failure.\nif HOSTED_DOMAIN_ENABLED:\n #DOMAIN = '%s.%s' % (DEFAULT_HOSTED_SUBDOMAIN, HOSTED_DOMAIN)\n DOMAIN = '%s.%s' % (DEFAULT_HOSTED_SUBDOMAIN, HOSTED_DOMAIN)\nelse:\n DOMAIN = GAE_DOMAIN\n\n\n\n\n# Subdomains aren't supported all that nicely by App Engine yet, so you\n# probably won't be able to enable WILDCARD_SUBDOMAINS below, but you can \n# still set up your app to use some of the static subdomains below.\n# Subdomains are ignored unless HOSTED_DOMAIN_ENABLED is True.\nSUBDOMAINS_ENABLED = False\nWILDCARD_USER_SUBDOMAINS_ENABLED = False\n\n# These are defined as { subdomain : url_conf, ...}\nINSTALLED_SUBDOMAINS = {\n 'api': 'api.urls', # api-only urlconf\n 'm': 'urls', # default urlconf, but allow the subdomain\n }\n\n# Enable SSL support for login and join, if using HOSTED_DOMAIN_ENABLED\n# this means you will be redirecting through https://GAE_DOMAIN/login\n# and https://GAE_DOMAIN/join for those respective actions.\nSSL_LOGIN_ENABLED = False\n\n#\n# Appearance / Theme\n#\n\n#\n# Cookie\n#\n\n# Cookie settings, pretty self explanatory, you shouldn't need to touch these.\nUSER_COOKIE = 'user'\nPASSWORD_COOKIE = 'password'\nCOOKIE_DOMAIN = '.%s' % DOMAIN\nCOOKIE_PATH = '/'\n\n#\n# Blog\n#\n\n# Do you want /blog to redirect to your blog?\nBLOG_ENABLED = False\n\n# Where is your blog?\nBLOG_URL = 'http://example.com'\nBLOG_FEED_URL = 'http://example.com/feeds'\n\n\n#\n# API\n#\n\n# Setting this to True will make the public API accept all requests as being \n# from ROOT with no regard to actual authentication.\n# Never this set to True on a production site.\nAPI_DISABLE_VERIFICATION = False\n\n# These next three determine which OAuth Signature Methods to allow.\nAPI_ALLOW_RSA_SHA1 = True\nAPI_ALLOW_HMAC_SHA1 = True\nAPI_ALLOW_PLAINTEXT = False\n\n# These three determine whether the ROOT use should be allowed to use these\n# methods, if any at all. Setting all of these to False will disable the \n# ROOT user from accessing the public API\nAPI_ALLOW_ROOT_RSA_SHA1 = True\nAPI_ALLOW_ROOT_HMAC_SHA1 = True\nAPI_ALLOW_ROOT_PLAINTEXT = False\n\n# OAuth consumer key and secret values\nROOT_TOKEN_KEY = 'ROOT_TOKEN_KEY'\nROOT_TOKEN_SECRET = 'ROOT_TOKEN_SECRET'\nROOT_CONSUMER_KEY = 'ROOT_CONSUMER_KEY'\nROOT_CONSUMER_SECRET = 'ROOT_CONSUMER_SECRET'\n\n# Allow support for legacy API authentication\nAPI_ALLOW_LEGACY_AUTH = False\nLEGACY_SECRET_KEY = 'I AM ALSO SECRET'\n\n#\n# SMS\n#\n\n# Enabling SMS will require a bit more than just making this True.\nSMS_ENABLED = False\n\n# Most SMS vendors will provide a service that will post messages to a url\n# on your site when an SMS has been received on their end, this setting allows\n# you to add a secret value to that must exist in that url to prevent \n# malicious use.\nSMS_VENDOR_SECRET = 'SMS_VENDOR'\n\n# Valid numbers on which you expect to receive SMS\nSMS_TARGET = '00000'\n\n# Whitelist regular expression for allowable mobile-terminated targets\nSMS_MT_WHITELIST = re.compile('\\+\\d+')\n\n# Blacklist regular expression for blocked mobile-terminated targets\nSMS_MT_BLACKLIST = None\n\n# Turn on test mode for SMS\nSMS_TEST_ONLY = False\n\n# Numbers to use when testing live SMS so you don't spam all your users\nSMS_TEST_NUMBERS = []\n\n\n#\n# XMPP / IM\n#\n\n# Enabling IM will require a bit more than just making this True.\nIM_ENABLED = False\n\n# This is the id (JID) of the IM bot that you will use to communicate with\n# users of the IM interface\nIM_BOT = '[email protected]'\n\n# Turn on test mode for IM\nIM_TEST_ONLY = False\n\n# JIDs to allow when testing live XMPP so you don't spam all your users\nIM_TEST_JIDS = []\n\n# Enable to send plain text messages only. Default is to send both plain\n# text and html.\nIM_PLAIN_TEXT_ONLY = False\n\n# Truncate entry title in comments. None or 140+ means no truncation.\nIM_MAX_LENGTH_OF_ENTRY_TITLES_FOR_COMMENTS = 40\n\n#\n# Task Queue\n#\n\n# Enabling the queue will allow you to process posts with larger numbers\n# of followers but will require you to set up a cron job that will continuously\n# ping a special url to make sure the queue gets processed\nQUEUE_ENABLED = True\n\n# The secret to use for your cron job that processes your queue\nQUEUE_VENDOR_SECRET = 'SECRET'\n\n\n#\n# Throttling Config\n#\n\n# This will control the max number of SMS to send over a 30-day period\nTHROTTLE_SMS_GLOBAL_MONTH = 10000\n\n\n\n\n# Settings for remote services\nIMAGE_UPLOAD_ENABLED = False\nIMAGE_UPLOAD_URL = 'upload.example.com'\n\nMAX_AVATAR_UPLOAD_KB = 300\n\n# Settings for Google Contacts import\nGOOGLE_CONTACTS_IMPORT_ENABLED = False\n\n\n\nFEEDS_ENABLED = False\nMARK_AS_SPAM_ENABLED = True\nPRESS_ENABLED = False\nBADGES_ENABLED = True\nHIDE_COMMENTS_ENABLED = True\nMULTIADMIN_ENABLED = True\nPRIVATE_CHANNELS_ENABLED = False\nMARKDOWN_ENABLED = False\n# Lists nicks of users participating in conversations underneath comment\n# areas for posts. Clicking list items inserts @nicks into comment box.\n# The list shows a maximum of 25 nicks.\nCOMMENT_QUICKLINKS_ENABLED = True\n# If enabled, adds support for using access keys 1-9 to insert @nicks into\n# comment box. Requires COMMENT_QUICKLINKS_ENABLED.\nCOMMENT_QUICKLINKS_ACCESSKEYS_ENABLED = False\n\nPROFILE_DB = False\n\n# Limit of avatar photo size in kilobytes\nMAX_AVATAR_PHOTO_KB = 200\n\nMAX_ACTIVATIONS = 10\n\n# Email Test mode\nEMAIL_TEST_ONLY = False\n\n# Allowed email addresses for testing\nEMAIL_TEST_ADDRESSES = []\n\n# Email limiting, if this is set it will restrict users to those with \n# email addresses in this domain\nEMAIL_LIMIT_DOMAIN = None\n\n\n\n# Gdata Stuff\nGDATA_CONSUMER_KEY = ''\nGDATA_CONSUMER_SECRET = ''\n\n\nDEFAULT_FROM_EMAIL = '[email protected]'\nDEFAULT_UNITTEST_TO_EMAIL = '[email protected]'\n\nPROFILING_DATA_PATH = 'profiling/prof_db.csv'\n\nDEFAULT_MEMBERS = []\n\nDEFAULT_TAXONOMY = 'tag_geo'\nDEFAULT_TAG = \"/%s\" % DEFAULT_TAXONOMY\nROOT_TAG = \"/%s\" % DEFAULT_TAXONOMY\n\n# Set up the settings for the dev server if we are running it\nif MANAGE_PY:\n try:\n from dev_settings import \n except ImportError:\n pass\n\n# Allow local overrides, useful for testing during development\ntry:\n from local_settings import \nexcept ImportError:\n pass\n\n\n# This is the name of the root user of the site\nROOT_NICK = 'root@%s' % NS_DOMAIN\n\n# This is the name of the site that will be used whenever it refers to itself\nSITE_NAME = \"CollabQ\"\nTAGLINE = \"Open Souce \| Enterprise \| Social Software\"\nSITE_DESCRIPTION = \"CollabQ community management system\"\nDEFAULT_CHANNEL = 'support'\nPOST_NAME = 'Post'\n# This is the colloquial name for an entry, mostly used for branding purposes\n\nCHANNEL_TYPES = ['Professional', 'Academic', 'Social']\nENABLE_CHANNELS = False\nENABLE_CHANNEL_TYPES = False\nENABLE_ACCOUNT_TYPE = False\n\n# Twitter\nTWITTER_CONSUMER_KEY = ''\nTWITTER_CONSUMER_SECRET = ''\n\n# Things to measure to taste\nMAX_POST_LENGTH = 200\nMAX_COMMENT_LENGTH = MAX_POST_LENGTH\nMAX_TWITTER_LENGTH = 140", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "POST_NAME ", "start_line": 151, "start_column": 0, 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Variable defined multiple times	neurodata/ndstore/test/test_ramon.py	[ { "content": " def test_annotation_field (self):\n \"\"\"Upload an annotation and test it's fields\"\"\"\n\n # Make an annotation \n makeAnno (p, 1)\n \n # Test Status\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test confidence\n confidence = random.random ()\n f = setField(p, 'confidence', confidence)\n f = getField(p, 'confidence')\n assert confidence - float(f.read()) < 0.001\n \n # Test author\n #f = self.getField(p, 'author')\n #assert 'Unit Test' == f.read()", "metadata": "root.Test_Ramon.test_annotation_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 227 }, { "content": " def test_synapse_field (self):\n \"\"\"Upload a synapse and test it's fields\"\"\"\n\n # Make a synapse\n makeAnno (p, 2)\n\n # Test synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test the inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_synapse_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 250 }, { "content": " def test_seed_field (self):\n \"\"\"Upload a seed and test it's fields\"\"\"\n\n # Make a seed\n makeAnno (p, 3)\n\n # Test the parent\n parent = random.randint (0,100)\n f = setField(p, 'parent', parent)\n f = getField(p, 'parent')\n assert parent == int(f.read()) \n\n # Test the source\n source = random.randint (0,100)\n f = setField(p, 'source', source)\n f = getField(p, 'source')\n assert source == int(f.read()) \n\n # Test the cubelocation\n cubelocation = random.randint (0,100)\n f = setField(p, 'cubelocation', cubelocation)\n f = getField(p, 'cubelocation')\n assert cubelocation == int(f.read()) \n \n # Test the position\n position = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'position', ','.join([str(i) for i in position]))\n f = getField(p, 'position')\n assert ','.join([str(i) for i in position]) == f.read()", "metadata": "root.Test_Ramon.test_seed_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 280 }, { "content": " def test_segment_field (self):\n \"\"\"Upload a segment and test it's fields\"\"\"\n\n # Make a segment\n makeAnno (p, 4)\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the segmentclass\n segmentclass = random.randint (0,100)\n f = setField(p, 'segmentclass', segmentclass)\n f = getField(p, 'segmentclass')\n assert segmentclass == int(f.read()) \n\n # Test the neuron\n neuron = random.randint (0,100)\n f = setField(p, 'neuron', neuron)\n f = getField(p, 'neuron')\n assert neuron == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n \n # Test the synapses\n synapses = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'synapses', ','.join([str(i) for i in synapses]))\n f = getField(p, 'synapses')\n assert ','.join([str(i) for i in synapses]) == f.read()", "metadata": "root.Test_Ramon.test_segment_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 311 }, { "content": " def test_neuron_field (self):\n \"\"\"Upload a neuron and test it's fields\"\"\"\n\n # Make a neuron\n makeAnno (p, 5)\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test segments\n status = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'segments', \",\".join([str(i) for i in status]))\n f = getField(p, 'segments')\n assert \",\".join([str(i) for i in status]) == f.read()", "metadata": "root.Test_Ramon.test_neuron_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 348 }, { "content": " def test_organelle_field (self):\n \"\"\"Upload an organelle and test it's fields\"\"\"\n\n # Make an organelle \n makeAnno ( p, 6 )\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the organelleclass\n organelleclass = random.randint (0,100)\n f = setField(p, 'organelleclass', organelleclass)\n f = getField(p, 'organelleclass')\n assert organelleclass == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_organelle_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 366 }, { "content": " def test_wrong_field ( self ):\n \n # Make an annotation \n makeAnno (p, 2)\n\n # Test the synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read())\n \n # bad format to a number\n url = \"http://{}/ca/{}/{}/{}/setField/status/aa/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )\n \n # request a missing field\n url = \"http://{}/ca/{}/{}/{}/getField/othernonesuch/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )", "metadata": "root.Test_Ramon.test_wrong_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 396 } ]	[ { "span": "f ", "start_line": 235, "start_column": 4, "end_line": 235, 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Unused import	sunlightlabs/read_FEC/fecreader/formdata/management/commands/mark_superceded_body_rows.py	[ { "content": "from dateutil.parser import parse as dateparse\n\n\nfrom django.core.management.base import BaseCommand, CommandError\nfrom django.db.models import Sum, Max, Min\n\n\nfrom formdata.models import SkedA, SkedE\nfrom fec_alerts.models import new_filing\nfrom formdata.utils.fec_import_logging import fec_logger\n\n\n# for debugging\nfrom django.db import connection\n\n# superceded operations are slow bc of query structure -- need to hit indexes here\n \n \n \n \n \n \n \n \n \n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def mark_superceded_F24s(new_f3x_new_filing):\n \n # we only mark the child rows as superceded--the filing itself isn't, because it's possible, in theory, that it's half superceded. \n coverage_from_date = new_f3x_new_filing.coverage_from_date\n coverage_through_date = new_f3x_new_filing.coverage_to_date\n raw_filer_id = new_f3x_new_filing.fec_id\n \n filing_numbers = new_filing.objects.filter(fec_id=raw_filer_id, form_type__startswith='F24').values('filing_number')\n filing_array = []\n for i in filing_numbers:\n filing_array.append(i['filing_number'])\n \n updated = SkedE.objects.filter(filing_number__in=filing_array, superceded_by_amendment=False, expenditure_date_formatted__gte=coverage_from_date, expenditure_date_formatted__lte=coverage_through_date).update(superceded_by_amendment=True)\n if updated:\n print \"marked %s superceded F24s\" % updated", "metadata": "root.mark_superceded_F24s", "header": "['module', '___EOS___']", "index": 16 }, { "content": "def mark_superceded_F65s(new_f3x_new_filing):\n \n coverage_from_date = new_f3x_new_filing.coverage_from_date\n coverage_through_date = new_f3x_new_filing.coverage_to_date\n raw_filer_id = new_f3x_new_filing.fec_id\n \n filing_numbers = new_filing.objects.filter(fec_id=raw_filer_id, form_type__startswith='F6').values('filing_number')\n filing_array = []\n for i in filing_numbers:\n filing_array.append(i['filing_number'])\n updated = SkedA.objects.filter(filing_number__in=filing_array, superceded_by_amendment=False, contribution_date__gte=coverage_from_date, contribution_date__lte=coverage_through_date).update(superceded_by_amendment=True)\n if updated:\n print \"marked %s superceded F65s\" % updated", "metadata": "root.mark_superceded_F65s", "header": "['module', '___EOS___']", "index": 33 }, { "content": "def mark_superceded_F57s(new_monthly_f5):\n print \"marking superceded F57s\"\n \n coverage_from_date = new_monthly_f5.coverage_from_date\n coverage_through_date = new_monthly_f5.coverage_to_date\n raw_filer_id = new_monthly_f5.fec_id\n \n filing_numbers = new_filing.objects.filter(fec_id=raw_filer_id, is_f5_quarterly=False).values('filing_number')\n filing_array = []\n for i in filing_numbers:\n filing_array.append(i['filing_number'])\n updated = SkedE.objects.filter(form_type__istartswith='F57', filing_number__in=filing_array, superceded_by_amendment=False, expenditure_date_formatted__gte=coverage_from_date, expenditure_date_formatted__lte=coverage_through_date).update(superceded_by_amendment=True)\n if updated:\n print \"marked %s superceded F57s\" % updated", "metadata": "root.mark_superceded_F57s", "header": "['module', '___EOS___']", "index": 48 }, { "content": "def summarize_f24(new_filing):\n filing_ies = SkedE.objects.filter(filing_number=new_filing.filing_number)\n \n results = filing_ies.aggregate(tot_spent=Sum('expenditure_amount'), start_date=Min('expenditure_date_formatted'), end_date=Max('expenditure_date_formatted'))\n if results:\n new_filing.tot_spent = results['tot_spent']\n new_filing.tot_ies = results['tot_spent']\n new_filing.coverage_from_date = results['start_date']\n new_filing.coverage_to_date = results['end_date']\n new_filing.save()", "metadata": "root.summarize_f24", "header": "['module', '___EOS___']", "index": 64 }, { "content": "def summarize_f6(new_filing):\n filing_skeda = SkedA.objects.filter(filing_number=new_filing.filing_number)\n\n results = filing_skeda.aggregate(tot_raised=Sum('contribution_amount'), start_date=Min('contribution_date_formatted'), end_date=Max('contribution_date_formatted'))\n if results:\n new_filing.tot_raised = results['tot_raised']\n new_filing.coverage_from_date = results['start_date']\n new_filing.coverage_to_date = results['end_date']\n new_filing.save()", "metadata": "root.summarize_f6", "header": "['module', '___EOS___']", "index": 75 }, { "content": "def summarize_nonquarterly_f5(new_filing):\n filing_ies = SkedE.objects.filter(filing_number=new_filing.filing_number)\n \n results = filing_ies.aggregate(start_date=Min('expenditure_date_formatted'), end_date=Max('expenditure_date_formatted'))\n new_filing.coverage_from_date = results['start_date']\n new_filing.coverage_to_date = results['end_date']\n new_filing.save()", "metadata": "root.summarize_nonquarterly_f5", "header": "['module', '___EOS___']", "index": 85 }, { "content": "class Command(BaseCommand):\n help = \"Mark the body rows as being superceded as appropriate; also set the new_filing data for stuff that can only be calculated after body rows have run.\"\n requires_model_validation = False\n \n", "metadata": "root.Command", "header": "['module', '___EOS___']", "index": 94 }, { "content": " def handle(self, args, *options):\n logger=fec_logger()\n \n filings_to_process = new_filing.objects.filter(previous_amendments_processed=True,header_is_processed=True, data_is_processed=True, body_rows_superceded=False).order_by('filing_number')\n \n for this_filing in filings_to_process:\n print \"processing %s \" % (this_filing.filing_number)\n \n \n # Create summary data for some forms that don't have it in the header. This script only runs after all the body rows of these filings have been entered; most other summary data is entered earlier in the process. \n if this_filing.form_type.upper() in ['F24', 'F24A', 'F24N']:\n summarize_f24(this_filing)\n elif this_filing.form_type.upper() in ['F6', 'F6A', 'F6N']:\n summarize_f6(this_filing)\n \n\n elif this_filing.form_type.startswith('F5') and not this_filing.is_f5_quarterly:\n summarize_nonquarterly_f5(this_filing)\n \n elif this_filing.form_type.startswith('F5') and this_filing.is_f5_quarterly:\n mark_superceded_F57s(this_filing)\n \n # if it's got sked E's and it's an F3X, overwrite 24 hr report\n elif this_filing.form_type.startswith('F3'): \n try:\n this_filing.lines_present['E']\n mark_superceded_F24s(this_filing)\n except KeyError:\n pass\n\n\n try:\n this_filing.lines_present['A']\n mark_superceded_F65s(this_filing)\n except KeyError:\n pass\n \n # By now we should have dates for all filings, including the ones that don't start with a coverage from date\n # that we added by finding the first transaction date, so we can safely set the cycle. \n if not this_filing.cycle:\n # we're about to save it, so don't hit the db twice.\n this_filing.set_cycle(save_now=False)\n \n this_filing.body_rows_superceded = True\n this_filing.save()", "metadata": "root.Command.handle", "header": "['class', 'Command', '(', 'BaseCommand', ')', ':', '___EOS___']", "index": 99 } ]	[ { "span": "from dateutil.parser import parse as dateparse", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 46 }, { "span": "from django.core.management.base import BaseCommand, CommandError", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 65 }, { "span": "from django.db import connection", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 32 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "dateutil_", "._", "parser_", "import_", "parse_", "as_", "date", 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Unused import	NikolayRag/typeTodo/PyMySQL/pymysql/tests/test_connection.py	[ { "content": "import datetime\nimport decimal\nimport time\nimport sys\nimport unittest2\nimport pymysql\nfrom pymysql.tests import base\n\n\n\n\n# A custom type and function to escape it\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class TestConnection(base.PyMySQLTestCase):\n\n\n\n\n\n\n\n\n\n", "metadata": "root.TestConnection", "header": "['module', '___EOS___']", "index": 9 }, { "content": " def test_utf8mb4(self):\n \"\"\"This test requires MySQL >= 5.5\"\"\"\n arg = self.databases[0].copy()\n arg['charset'] = 'utf8mb4'\n conn = pymysql.connect(*arg)", "metadata": "root.TestConnection.test_utf8mb4", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 10 }, { "content": " def test_largedata(self):\n \"\"\"Large query and response (>=16MB)\"\"\"\n cur = self.connections[0].cursor()\n cur.execute(\"SELECT @@max_allowed_packet\")\n if cur.fetchone()[0] < 1610241024 + 10:\n print(\"Set max_allowed_packet to bigger than 17MB\")\n return\n t = 'a' (1610241024)\n cur.execute(\"SELECT '\" + t + \"'\")\n assert cur.fetchone()[0] == t", "metadata": "root.TestConnection.test_largedata", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 16 }, { "content": " def test_autocommit(self):\n con = self.connections[0]\n self.assertFalse(con.get_autocommit())\n\n cur = con.cursor()\n cur.execute(\"SET AUTOCOMMIT=1\")\n self.assertTrue(con.get_autocommit())\n\n con.autocommit(False)\n self.assertFalse(con.get_autocommit())\n cur.execute(\"SELECT @@AUTOCOMMIT\")\n self.assertEqual(cur.fetchone()[0], 0)", "metadata": "root.TestConnection.test_autocommit", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 27 }, { "content": " def test_select_db(self):\n con = self.connections[0]\n current_db = self.databases[0]['db']\n other_db = self.databases[1]['db']\n\n cur = con.cursor()\n cur.execute('SELECT database()')\n self.assertEqual(cur.fetchone()[0], current_db)\n\n con.select_db(other_db)\n cur.execute('SELECT database()')\n self.assertEqual(cur.fetchone()[0], other_db)", "metadata": "root.TestConnection.test_select_db", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 40 }, { "content": " def test_connection_gone_away(self):\n \"\"\"\n http://dev.mysql.com/doc/refman/5.0/en/gone-away.html\n http://dev.mysql.com/doc/refman/5.0/en/error-messages-client.html#error_cr_server_gone_error\n \"\"\"\n con = self.connections[0]\n cur = con.cursor()\n cur.execute(\"SET wait_timeout=1\")\n time.sleep(2)\n with self.assertRaises(pymysql.OperationalError) as cm:\n cur.execute(\"SELECT 1+1\")\n # error occures while reading, not writing because of socket buffer.\n #self.assertEquals(cm.exception.args[0], 2006)\n self.assertIn(cm.exception.args[0], (2006, 2013))", "metadata": "root.TestConnection.test_connection_gone_away", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 53 }, { "content": " def test_init_command(self):\n conn = pymysql.connect(\n init_command='SELECT \"bar\"; SELECT \"baz\"',\n self.databases[0]\n )\n c = conn.cursor()\n c.execute('select \"foobar\";')\n self.assertEqual(('foobar',), c.fetchone())\n conn.close()\n with self.assertRaises(pymysql.err.Error):\n conn.ping(reconnect=False)", "metadata": "root.TestConnection.test_init_command", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 68 }, { "content": " def test_read_default_group(self):\n conn = pymysql.connect(\n read_default_group='client',\n self.databases[0]\n )\n self.assertTrue(conn.open)", "metadata": "root.TestConnection.test_read_default_group", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 80 }, { "content": " def test_context(self):\n with self.assertRaises(ValueError):\n c = pymysql.connect(self.databases[0])\n with c as cur:\n cur.execute('create table test ( a int )')\n c.begin()\n cur.execute('insert into test values ((1))')\n raise ValueError('pseudo abort')\n c.commit()\n c = pymysql.connect(self.databases[0])\n with c as cur:\n cur.execute('select count() from test')\n self.assertEqual(0, cur.fetchone()[0])\n cur.execute('insert into test values ((1))')\n with c as cur:\n cur.execute('select count() from test')\n self.assertEqual(1,cur.fetchone()[0])\n cur.execute('drop table test')", "metadata": "root.TestConnection.test_context", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 87 }, { "content": " def test_set_charset(self):\n c = pymysql.connect(self.databases[0])\n c.set_charset('utf8')\n # TODO validate setting here", "metadata": "root.TestConnection.test_set_charset", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 106 }, { "content": " def test_defer_connect(self):\n import socket\n for db in self.databases:\n d = db.copy()\n try:\n sock = socket.socket(socket.AF_UNIX, socket.SOCK_STREAM)\n sock.connect(d['unix_socket'])\n except KeyError:\n sock = socket.create_connection(\n (d.get('host', 'localhost'), d.get('port', 3306)))\n for k in ['unix_socket', 'host', 'port']:\n try:\n del d[k]\n except KeyError:\n pass\n\n c = pymysql.connect(defer_connect=True, d)\n self.assertFalse(c.open)\n c.connect(sock)\n c.close()", "metadata": "root.TestConnection.test_defer_connect", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 111 }, { "content": " @unittest2.skipUnless(sys.version_info[0:2] >= (3,2), \"required py-3.2\")\n def test_no_delay_warning(self):\n current_db = self.databases[0].copy()\n current_db['no_delay'] = True\n with self.assertWarns(DeprecationWarning) as cm:\n conn = pymysql.connect(**current_db)", "metadata": "root.TestConnection.test_no_delay_warning", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 132 }, { "content": "class Foo(object):\n value = \"bar\"", "metadata": "root.Foo", "header": "['module', '___EOS___']", "index": 141 }, { "content": "def escape_foo(x, d):\n return x.value", "metadata": "root.escape_foo", "header": "['module', '___EOS___']", "index": 145 }, { "content": "class TestEscape(base.PyMySQLTestCase):\n\n\n\n\n\n", "metadata": "root.TestEscape", "header": "['module', '___EOS___']", "index": 149 }, { "content": " def test_escape_string(self):\n con = self.connections[0]\n cur = con.cursor()\n\n self.assertEqual(con.escape(\"foo'bar\"), \"'foo\\\\'bar'\")\n # added NO_AUTO_CREATE_USER as not including it in 5.7 generates warnings\n cur.execute(\"SET sql_mode='NO_BACKSLASH_ESCAPES,NO_AUTO_CREATE_USER'\")\n self.assertEqual(con.escape(\"foo'bar\"), \"'foo''bar'\")", "metadata": "root.TestEscape.test_escape_string", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 150 }, { "content": " def test_escape_builtin_encoders(self):\n con = self.connections[0]\n cur = con.cursor()\n\n val = datetime.datetime(2012, 3, 4, 5, 6)\n self.assertEqual(con.escape(val, con.encoders), \"'2012-03-04 05:06:00'\")", "metadata": "root.TestEscape.test_escape_builtin_encoders", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 159 }, { "content": " def test_escape_custom_object(self):\n con = self.connections[0]\n cur = con.cursor()\n\n mapping = {Foo: escape_foo}\n self.assertEqual(con.escape(Foo(), mapping), \"bar\")", "metadata": "root.TestEscape.test_escape_custom_object", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 166 }, { "content": " def test_escape_fallback_encoder(self):\n con = self.connections[0]\n cur = con.cursor()\n\n class Custom(str):\n pass\n\n mapping = {pymysql.text_type: pymysql.escape_string}\n self.assertEqual(con.escape(Custom('foobar'), mapping), \"'foobar'\")", "metadata": "root.TestEscape.test_escape_fallback_encoder", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 173 }, { "content": " def test_escape_no_default(self):\n con = self.connections[0]\n cur = con.cursor()\n\n self.assertRaises(TypeError, con.escape, 42, {})", "metadata": "root.TestEscape.test_escape_no_default", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 183 }, { "content": " def test_escape_dict_value(self):\n con = self.connections[0]\n cur = con.cursor()\n\n mapping = con.encoders.copy()\n mapping[Foo] = escape_foo\n self.assertEqual(con.escape({'foo': Foo()}, mapping), {'foo': \"bar\"})", "metadata": "root.TestEscape.test_escape_dict_value", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 189 }, { "content": " def test_escape_list_item(self):\n con = self.connections[0]\n cur = con.cursor()\n\n mapping = con.encoders.copy()\n mapping[Foo] = escape_foo\n self.assertEqual(con.escape([Foo()], mapping), \"(bar)\")", "metadata": "root.TestEscape.test_escape_list_item", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 197 } ]	[ { "span": "import decimal", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 14 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "datetime_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "decimal_", 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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]
Imprecise assert	rizar/attention-lvcsr/libs/Theano/theano/tensor/tests/test_subtensor.py	[ { "content": " def test1_ok_range_finite(self):\n n = self.shared(numpy.arange(3, dtype=self.dtype))\n t = n[0:2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [0, 1]).all())", "metadata": "root.T_subtensor.test1_ok_range_finite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 157 }, { "content": " def test2_ok_range_finite(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((3, 4)))\n # Also check negative index\n for idx in [(slice(0, 2), 3), ((slice(0, 2), -1)), (slice(0, 2), -4)]:\n t = n[idx] # l]#0:2,3]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.allclose(tval, n.get_value()[idx]))", "metadata": "root.T_subtensor.test2_ok_range_finite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 165 }, { "content": " def test1_ok_elem(self):\n n = self.shared(numpy.ones(1, dtype=self.dtype) * 5)\n t = n[0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == ())\n self.assertTrue(tval == 5.0)", "metadata": "root.T_subtensor.test1_ok_elem", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 191 }, { "content": " def test1_ok_range_infinite(self):\n n = self.shared(numpy.arange(3, dtype=self.dtype))\n t = n[1:]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [1.0, 2.0]).all())", "metadata": "root.T_subtensor.test1_ok_range_infinite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 199 }, { "content": " def test1_ok_strided(self):\n n = self.shared(numpy.arange(5, dtype=self.dtype))\n t = n[1::2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [1.0, 3.0]).all())\n\n t = n[0:-1:2] # 0 to 1 from the end stepping by 2\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [0.0, 2.0]).all())", "metadata": "root.T_subtensor.test1_ok_strided", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 207 }, { "content": " def test2_ok_elem(self):\n n = self.shared(numpy.arange(6, dtype=self.dtype).reshape((2, 3)))\n t = n[0, 2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == ())\n self.assertTrue(numpy.all(tval == 2))", "metadata": "root.T_subtensor.test2_ok_elem", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 252 }, { "content": " def test2_ok_row(self):\n n = self.shared(numpy.arange(6, dtype=self.dtype).reshape((2, 3)))\n t = n[1]\n self.assertFalse(any(n.type.broadcastable))\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (3,))\n self.assertTrue(numpy.all(tval == [3, 4, 5]))", "metadata": "root.T_subtensor.test2_ok_row", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 260 }, { "content": " def test2_ok_col(self):\n n = self.shared(numpy.arange(6, dtype=self.dtype).reshape((2, 3)))\n t = n[:, 0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n self.assertFalse(any(n.type.broadcastable))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.all(tval == [0, 3]))", "metadata": "root.T_subtensor.test2_ok_col", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 269 }, { "content": " def test2_ok_rows_finite(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((4, 3)))\n t = n[1:3, 0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.all(tval == [3, 6]))", "metadata": "root.T_subtensor.test2_ok_rows_finite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 278 }, { "content": " def test2_ok_cols_infinite(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((4, 3)))\n t = n[1, 2:]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (1,))\n self.assertTrue(numpy.all(tval == 5))", "metadata": "root.T_subtensor.test2_ok_cols_infinite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 286 }, { "content": " def test2_ok_strided(self):\n n = self.shared(numpy.arange(20, dtype=self.dtype).reshape((4, 5)))\n t = n[1:4:2, 1:5:2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2, 2))\n self.assertTrue(numpy.all(tval == [[6, 8], [16, 18]]))", "metadata": "root.T_subtensor.test2_ok_strided", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 294 }, { "content": " def test3_ok_mat(self):\n n = self.shared(numpy.arange(24, dtype=self.dtype).reshape((2, 3, 4)))\n t = n[0, 0, 0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == ())\n self.assertTrue(numpy.all(tval == 0))", "metadata": "root.T_subtensor.test3_ok_mat", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 302 }, { "content": " def test_long(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((4, 3)))\n t = n[L(1):L(4):L(2), L(1)]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.all(tval == [4, 10]))", "metadata": "root.T_subtensor.test_long", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 310 }, { "content": " def test_ok_list(self):\n for data, idx in [(rand(4), [1, 0]),\n (rand(4, 5), [2, 3, -1]),\n (rand(4, 2, 3), [0, 3]),\n (rand(4, 2, 3), [3, 3, 1, 1, 2, 2, 0, 0]),\n (rand(4, 2, 3), [3, 3, 1, 1, 2, 2, 0, 0,\n -1, -2, -3, -4]),\n # Test 4 dims as gpu code use another algo\n # in that case This new algo is not as much\n # optimized for that case.\n (rand(4, 4, 2, 3), [3,\n 3, 1, 1, 2, 2, 0, 0, -1, -2, -3, -4]),\n # Test with TensorConstant index.\n (rand(4, 2, 3),\n theano.tensor.constant([3, 3, 1, 1, 2, 2, 0, 0])),\n ]:\n data = numpy.asarray(data, dtype=self.dtype)\n n = self.shared(data)\n t = n[idx]\n\n # We test again AdvancedSubtensor1 as we transfer data to the cpu.\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor1))\n\n val = self.eval_output_and_check(t, list=True)\n if isinstance(idx, list):\n good = data[idx]\n else:\n good = data[idx.data]\n self.assertTrue(val.ndim == data.ndim)\n self.assertTrue(numpy.allclose(val, good), (val, good))\n\n # Test reuse of output memory\n if type(self.adv_sub1) == tensor.AdvancedSubtensor1:\n op = self.adv_sub1()\n # When idx is a TensorConstant.\n if hasattr(idx, \"data\"):\n idx = idx.data\n test_out = [[None]]\n op.perform(None, [data, idx], test_out)\n out1 = test_out[0][0]\n op.perform(None, [data, idx], test_out)\n out2 = test_out[0][0]\n assert out1 is out2\n\n # test the grad\n gn = theano.grad(t.sum(), n)\n g = self.function([], gn, op=self.adv_incsub1)\n utt.verify_grad(lambda m: m[[1, 3]],\n [numpy.random.rand(5, 5).astype(self.dtype)])\n g_0 = g()\n utt.verify_grad(lambda m: m[idx],\n [data])", "metadata": "root.T_subtensor.test_ok_list", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 437 }, { "content": " def test_adv_sub1_broadcast(self):\n v = numpy.arange(3, dtype=self.dtype).reshape((1, 3))\n n = self.shared(v5, broadcastable=(True, False))\n idx = tensor.lvector()\n t = n[idx]\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor1))\n\n f = self.function([idx], t, op=self.adv_sub1)\n topo = f.maker.fgraph.toposort()\n topo_ = [node for node in topo if not isinstance(node.op,\n self.ignore_topo)]\n assert len(topo_) == 1\n self.assertTrue(isinstance(topo_[0].op, self.adv_sub1))\n f_0 = f([0])\n self.assertTrue(f_0.shape == (1, 3))\n self.assertTrue(numpy.allclose(f_0, v5))\n f_00 = f([0, 0])\n self.assertTrue(f_00.shape == (2, 3))\n self.assertTrue(numpy.allclose(f_00, v5))\n self.assertRaises(IndexError, f, [0, 1])\n\n # Test the gradient\n c = t.sum()\n gn = theano.grad(c, n)\n g = self.function([idx], gn, op=self.adv_incsub1)\n g_0 = g([0])\n self.assertTrue(g_0.shape == (1, 3))\n self.assertTrue(numpy.allclose(g_0, 1))\n g_00 = g([0, 0])\n self.assertTrue(g_00.shape == (1, 3))\n self.assertTrue(numpy.allclose(g_00, 2))\n\n utt.verify_grad(lambda m: m[[1, 3]],\n [numpy.random.rand(5, 5).astype(self.dtype)])\n\n def fun(x, y):\n return advanced_inc_subtensor1(x, y, [1, 3])\n utt.verify_grad(fun, [numpy.random.rand(5, 5).astype(self.dtype),\n numpy.random.rand(2, 5).astype(self.dtype)])\n\n def fun(x, y):\n return advanced_set_subtensor1(x, y, [1, 3])\n utt.verify_grad(fun, [numpy.random.rand(5, 5).astype(self.dtype),\n numpy.random.rand(2, 5).astype(self.dtype)])", "metadata": "root.T_subtensor.test_adv_sub1_broadcast", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 516 }, { "content": " def test_adv_sub1_idx_broadcast(self):\n # The idx can be a broadcastable vector.\n ones = numpy.ones((4, 3), dtype=self.dtype)\n n = self.shared(ones 5)\n idx = tensor.TensorType(dtype='int64', broadcastable=(True,))()\n assert idx.type.broadcastable == (True,)\n t = n[idx]\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor1))\n\n f = self.function([idx], t, op=self.adv_sub1)\n topo = f.maker.fgraph.toposort()\n topo_ = [node for node in topo if not isinstance(node.op,\n self.ignore_topo)]\n assert len(topo_) == 1\n self.assertTrue(isinstance(topo_[0].op, self.adv_sub1))\n f_0 = f([0])\n self.assertTrue(f_0.shape == (1, 3))\n self.assertTrue(numpy.allclose(f_0, 5))\n\n # Test the gradient\n c = t.sum()\n gn = theano.grad(c, n)\n g = self.function([idx], gn, op=self.adv_incsub1)\n g_0 = g([0])\n self.assertTrue(g_0.shape == (4, 3))\n self.assertTrue(numpy.allclose(g_0[0], 1))\n self.assertTrue(numpy.allclose(g_0[1:], 0))", "metadata": "root.T_subtensor.test_adv_sub1_idx_broadcast", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 561 }, { "content": " def grad_list_(self, idxs, data):\n n = self.shared(data)\n\n for idx in idxs:\n # Should stay on the cpu.\n idx_ = _shared(numpy.asarray(idx))\n t = n[idx_]\n gn = theano.tensor.grad(theano.tensor.sum(theano.tensor.exp(t)), n)\n f = self.function([], [gn, gn.shape], op=self.adv_incsub1)\n topo = f.maker.fgraph.toposort()\n if not self.fast_compile:\n assert any([isinstance(node.op, self.\n adv_incsub1) and node.op.inplace for node in topo])\n else:\n assert any([isinstance(node.op, self.\n adv_incsub1) for node in topo])\n assert any([isinstance(node.op, self.adv_sub1) for node in topo])\n gval, gshape = f()\n good = numpy.zeros_like(data)\n # don't work when the same index is used many time\n # good[idx] += numpy.exp(data[idx])\n for i in idx:\n good[i] += numpy.exp(data[i])\n self.assertTrue(gval.ndim == data.ndim)\n self.assertTrue(numpy.allclose(gval, good), (gval, good))\n self.assertTrue(numpy.allclose(gshape, data.shape))\n\n def fct(t):\n return theano.tensor.sum(t[idx_])\n utt.verify_grad(fct, [data])\n\n # Test the grad of the grad (e.i. AdvancedIncSubtensor1.grad)\n def fct2(t):\n return theano.tensor.grad(theano.tensor.sum(t[idx_]), t)\n utt.verify_grad(fct2, [data])\n\n # Test shape of AdvancedIncSubtensor1 and AdvancedSubtensor1\n if not self.fast_compile:\n ops = (self.adv_incsub1, self.adv_sub1)\n else:\n ops = self.ops\n if idx is idxs[0]:\n f = self.function([], [gn.shape, n[idx_].shape],\n op=ops,\n N=0, N_fast=2)\n f()", "metadata": "root.T_subtensor.grad_list_", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 777 }, { "content": " def test_index_w_int_and_vec(self):\n # like test_ok_list, but with a single index on the first one\n # data has to have at least 2 dimensions\n for data, idx in [(rand(4, 5), [2, 3]),\n (rand(2, 4, 3), [0, 3]),\n (rand(2, 4, 3), [3, 3, 1, 1, 2, 2, 0, 0]),\n (rand(2, 4, 3), [3, 3, 1, 1, 2, 2, 0, 0,\n -1, -2, -3, -4]),\n # Test 4 dims as gpu code use another algo\n # in that case This new algo is not as much\n # optimized for that case.\n (rand(4, 4, 2, 3), [3,\n 3, 1, 1, 2, 2, 0, 0, -1, -2, -3, -4]),\n # Test with TensorConstant index.\n (rand(2, 4, 3),\n theano.tensor.constant([3, 3, 1, 1, 2, 2, 0, 0])),\n ]:\n data = numpy.asarray(data, dtype=self.dtype)\n n = self.shared(data)\n t = n[0, idx]\n\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor))\n\n val = self.eval_output_and_check(t)\n if isinstance(idx, list):\n good = data[0, idx]\n else:\n good = data[0, idx.data]\n self.assertTrue(val.ndim == data.ndim - 1)\n self.assertTrue(numpy.allclose(val, good), (val, good))", "metadata": "root.TestAdvancedSubtensor.test_index_w_int_and_vec", "header": "['class', 'TestAdvancedSubtensor', '(', 'unittest', '.', 'TestCase', ')', ':', '___NEWLINE___', '# test inc_subtensor', '___NL___', '# also tests set_subtensor', '___NL___', '___EOS___']", "index": 1307 } ]	[ { "span": "self.assertTrue(tval.shape == (2,))", "start_line": 162, "start_column": 8, 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Unused import	fusionbox/django-widgy/widgy/__init__.py	[ { "content": "import traceback\nimport sys\n\nfrom django.core.exceptions import ImproperlyConfigured\n\n\n\n\n\n\nregistry = Registry()\nregister = registry.register\nunregister = registry.unregister\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class BaseRegistry(set):\n \"\"\"\n Container class for unique Django models.\n\n A model must be registered with a registry to be visible to Widgy.\n \"\"\"\n", "metadata": "root.BaseRegistry", "header": "['module', '___EOS___']", "index": 6 }, { "content": " def register(self, model):\n from django.db import models\n if model in self:\n raise ImproperlyConfigured(\n \"You cannot register the same model ('{0}') twice.\"\n .format(model)\n )\n if not issubclass(model, models.Model):\n raise ImproperlyConfigured((\"{0} is not a subclass of django.db.models.Model, \"\n \"so it cannot be registered\").format(model))\n if model._meta.abstract:\n raise ImproperlyConfigured(\"You cannot register the abstract class {0}\".format(model))\n self.add(model)\n\n # allow use as a decorator\n return model", "metadata": "root.BaseRegistry.register", "header": "['class', 'BaseRegistry', '(', 'set', ')', ':', '___EOS___']", "index": 12 }, { "content": " def unregister(self, model):\n self.remove(model)", "metadata": "root.BaseRegistry.unregister", "header": "['class', 'BaseRegistry', '(', 'set', ')', ':', '___EOS___']", "index": 29 }, { "content": "class Registry(BaseRegistry):\n \"\"\"\n Container class for all widgets available for use in widgy.\n\n A widget must be registered with the registry in order to appear in the\n available widgets box.\n \"\"\"\n", "metadata": "root.Registry", "header": "['module', '___EOS___']", "index": 33 }, { "content": " def register(self, content):\n from widgy.models import Content\n if not issubclass(content, Content):\n raise ImproperlyConfigured(\n \"{0} is not a subclass of Content, so it cannot be registered\".format(content)\n )\n return super(Registry, self).register(content)", "metadata": "root.Registry.register", "header": "['class', 'Registry', '(', 'BaseRegistry', ')', ':', '___EOS___']", "index": 41 } ]	[ { "span": "import traceback", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 16 }, { "span": "import sys", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 10 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "traceback_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "sys_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "django_", "._", "core_", "._", "exceptions_", "import_", "Impro", "perl", "y", "Configured_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", 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Unused import	scieloorg/scielo-manager/scielomanager/validator/tests/tests_pages.py	[ { "content": "# coding:utf-8\nfrom os import path\nimport unittest\nimport mocker\nfrom PIL import Image\nimport StringIO\n\nfrom django.core.urlresolvers import reverse\nfrom django_webtest import WebTest\nfrom django.conf import settings\nfrom django_factory_boy import auth\nfrom django.core.files.uploadedfile import InMemoryUploadedFile\n\nfrom . import doubles\nimport pkg_resources\n\nPACKTOOLS_VERSION = pkg_resources.get_distribution('packtools').version\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def _get_test_xml_abspath(filename):\n folder_path = settings.PROJECT_PATH\n folder_path = settings.PROJECT_PATH.split('/')\n folder_path.extend(['validator', 'tests', 'xml_tests_files', filename])\n return '/'.join(folder_path)", "metadata": "root._get_test_xml_abspath", "header": "['module', '___EOS___']", "index": 19 }, { "content": "def get_temporary_text_file():\n io = StringIO.StringIO()\n io.write('foo')\n text_file = InMemoryUploadedFile(io, field_name='file', name='foo.txt', content_type='text', size=io.len, charset='utf8')\n text_file.seek(0)\n return text_file", "metadata": "root.get_temporary_text_file", "header": "['module', '___EOS___']", "index": 26 }, { "content": "def get_temporary_image_file():\n io = StringIO.StringIO()\n size = (200, 200)\n color = (255, 0, 0, 0)\n image = Image.new(\"RGBA\", size, color)\n image.save(io, format='PNG')\n image_file = InMemoryUploadedFile(io, field_name='file', name='foo.png', content_type='png', size=io.len, charset=None)\n image_file.seek(0)\n return image_file", "metadata": "root.get_temporary_image_file", "header": "['module', '___EOS___']", "index": 34 }, { "content": "def get_temporary_xml_file(xml_abs_path):\n fp = open(xml_abs_path)\n io = StringIO.StringIO(fp.read())\n fp.close()\n xml_file = InMemoryUploadedFile(io, field_name='file', name='foo.xml', content_type='text/xml', size=io.len, charset='utf8')\n xml_file.seek(0)\n return xml_file", "metadata": "root.get_temporary_xml_file", "header": "['module', '___EOS___']", "index": 45 }, { "content": "class ValidatorTests(WebTest, mocker.MockerTestCase):\n\n\n\n\n\n\n", "metadata": "root.ValidatorTests", "header": "['module', '___EOS___']", "index": 54 }, { "content": " def test_access_unauthenticated_user(self):\n response = self.app.get(\n reverse('validator.packtools.stylechecker',),\n )\n self.assertEqual(response.status_code, 200)\n self.assertTemplateUsed(response, 'validator/stylechecker.html')", "metadata": "root.ValidatorTests.test_access_unauthenticated_user", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 56 }, { "content": " def test_access_authenticated_user(self):\n self.user = auth.UserF(is_active=True)\n response = self.app.get(\n reverse('validator.packtools.stylechecker',),\n user=self.user\n )\n self.assertEqual(response.status_code, 200)\n self.assertTemplateUsed(response, 'validator/stylechecker.html')", "metadata": "root.ValidatorTests.test_access_authenticated_user", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 63 }, { "content": " def test_link_is_present_at_homepage(self):\n response = self.app.get(\n reverse('index',),\n )\n # response redirecto to login\n self.assertEqual(response.status_code, 302)\n response = response.follow()\n self.assertEqual(response.status_code, 200)\n self.assertTemplateUsed(response, 'registration/login.html')\n expected_url = reverse('validator.packtools.stylechecker',)\n response.mustcontain('href=\"%s\"' % expected_url)", "metadata": "root.ValidatorTests.test_link_is_present_at_homepage", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 72 }, { "content": " def test_submit_empty_form_is_not_valid(self):\n # with\n page = self.app.get(\n reverse('validator.packtools.stylechecker',),\n )\n form = page.forms['xml_upload_form']\n # when\n response = form.submit()\n # then\n self.assertTemplateUsed(response, 'validator/stylechecker.html')\n self.assertFalse(response.context['form'].is_valid())\n form_errors = response.context['form'].errors\n expected_errors = {'file': [u'This field is required.']}\n self.assertEqual(form_errors, expected_errors)\n self.assertFalse(hasattr(response.context, 'results'))", "metadata": "root.ValidatorTests.test_submit_empty_form_is_not_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 84 }, { "content": " def test_submit_text_file_then_form_not_valid(self):\n \"\"\"\n Submitting a text file will raise a from validation error\n \"\"\"\n # with\n test_file = get_temporary_text_file()\n # when\n response = self.client.post(\n reverse('validator.packtools.stylechecker',),\n {\n 'file': test_file\n }\n )\n # then\n form = response.context['form']\n self.assertFalse(response.context['form'].is_valid())\n expected_errors = {\n 'file': [u'This type of file is not allowed! Please select another file.']\n }\n self.assertEqual(form.errors, expected_errors)", "metadata": "root.ValidatorTests.test_submit_text_file_then_form_not_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 100 }, { "content": " def test_submit_image_file_then_form_not_valid(self):\n \"\"\"\n Submitting a image file will raise a from validation error\n \"\"\"\n # with\n test_file = get_temporary_image_file()\n # when\n response = self.client.post(\n reverse('validator.packtools.stylechecker',),\n {\n 'file': test_file\n }\n )\n # then\n form = response.context['form']\n self.assertFalse(response.context['form'].is_valid())\n expected_errors = {'file': [u'This type of file is not allowed! Please select another file.']}\n self.assertEqual(form.errors, expected_errors)", "metadata": "root.ValidatorTests.test_submit_image_file_then_form_not_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 121 }, { "content": " def test_submit_valid_xml_file_then_get_annotations_form_valid(self):\n \"\"\"\n Submitting a xml file that generate annotations will let the form as valid,\n and xml validation will return annotations\n \"\"\"\n # with\n\n stub_analyze_xml = doubles.make_stub_analyze_xml('valid')\n mock_utils = self.mocker.replace('validator.utils')\n mock_utils.analyze_xml\n self.mocker.result(stub_analyze_xml)\n\n self.mocker.replay()\n\n test_file_path = _get_test_xml_abspath('with_style_errors.xml')\n test_file = get_temporary_xml_file(test_file_path)\n\n # when\n response = self.client.post(\n reverse('validator.packtools.stylechecker',),\n {\n 'file': test_file\n }\n )\n\n # then\n form = response.context['form']\n xml_exception = response.context['xml_exception']\n results = response.context['results']\n\n self.assertTrue(form.is_valid())\n self.assertTemplateUsed('validator/stylechecker.html')\n\n # the template cares about this keys\n self.assertEqual(results.keys(), ['validation_errors', 'meta', 'annotations'])", "metadata": "root.ValidatorTests.test_submit_valid_xml_file_then_get_annotations_form_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 140 } ]	[ { "span": "from os import path", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 19 }, { "span": "import unittest", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 15 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "codi", "ng", ":", "utf", "-", "8_", "\\u\\u\\uNL\\u\\u\\u_", "from_", "os_", "import_", "path_", 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Unused local variable	tornadoweb/tornado/tornado/gen.py	[ { "content": "def _make_coroutine_wrapper(func, replace_callback):\n \"\"\"The inner workings of ``@gen.coroutine`` and ``@gen.engine``.\n\n The two decorators differ in their treatment of the ``callback``\n argument, so we cannot simply implement ``@engine`` in terms of\n ``@coroutine``.\n \"\"\"\n # On Python 3.5, set the coroutine flag on our generator, to allow it\n # to be used with 'await'.\n if hasattr(types, 'coroutine'):\n func = types.coroutine(func)\n\n @functools.wraps(func)\n def wrapper(args, kwargs):\n future = TracebackFuture()\n\n if replace_callback and 'callback' in kwargs:\n callback = kwargs.pop('callback')\n IOLoop.current().add_future(\n future, lambda future: callback(future.result()))\n\n try:\n result = func(args, **kwargs)\n except (Return, StopIteration) as e:\n result = _value_from_stopiteration(e)\n except Exception:\n future.set_exc_info(sys.exc_info())\n return future\n else:\n if isinstance(result, GeneratorType):\n # Inline the first iteration of Runner.run. This lets us\n # avoid the cost of creating a Runner when the coroutine\n # never actually yields, which in turn allows us to\n # use \"optional\" coroutines in critical path code without\n # performance penalty for the synchronous case.\n try:\n orig_stack_contexts = stack_context._state.contexts\n yielded = next(result)\n if stack_context._state.contexts is not orig_stack_contexts:\n yielded = TracebackFuture()\n yielded.set_exception(\n stack_context.StackContextInconsistentError(\n 'stack_context inconsistency (probably caused '\n 'by yield within a \"with StackContext\" block)'))\n except (StopIteration, Return) as e:\n future.set_result(_value_from_stopiteration(e))\n except Exception:\n future.set_exc_info(sys.exc_info())\n else:\n Runner(result, future, yielded)\n try:\n return future\n finally:\n # Subtle memory optimization: if next() raised an exception,\n # the future's exc_info contains a traceback which\n # includes this stack frame. This creates a cycle,\n # which will be collected at the next full GC but has\n # been shown to greatly increase memory usage of\n # benchmarks (relative to the refcount-based scheme\n # used in the absence of cycles). We can avoid the\n # cycle by clearing the local variable after we return it.\n future = None\n future.set_result(result)\n return future\n return wrapper", "metadata": "root._make_coroutine_wrapper", "header": "['module', '___EOS___']", "index": 247 } ]	[ { "span": "future ", "start_line": 308, "start_column": 20, "end_line": 308, "end_column": 26 } ]	[]	1	true	[ "[CLS]_", "Un", "used_", "local_", "variable_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "\\u", "make", "\\u", "coroutine", "\\u", "wrapper_", "(_", "func_", ",_", "replace", "\\u", "callback_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "\"\"\"", "The", " ", "inner", " ", "working", "s", " ", "of", " ", "``", "@", "gen", ".", "coroutine", "``", " ", "and", " ", "``", "@", "gen", ".", "eng", "ine", "``.", "\\", "10", ";", "\\", "10", ";", " ", " ", " ", " ", "The", " ", "two", " ", "decorat", "ors", " ", "differ", " ", "in", 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Unreachable code	amrdraz/kodr/app/brython/www/src/Lib/test/test_asyncore.py	[ { "content": " def test_compact_traceback(self):\n try:\n raise Exception(\"I don't like spam!\")\n except:\n real_t, real_v, real_tb = sys.exc_info()\n r = asyncore.compact_traceback()\n else:\n self.fail(\"Expected exception\")\n\n (f, function, line), t, v, info = r\n self.assertEqual(os.path.split(f)[-1], 'test_asyncore.py')\n self.assertEqual(function, 'test_compact_traceback')\n self.assertEqual(t, real_t)\n self.assertEqual(v, real_v)\n self.assertEqual(info, '[%s\|%s\|%s]' % (f, function, line))", "metadata": "root.HelperFunctionTests.test_compact_traceback", "header": "['class', 'HelperFunctionTests', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 221 }, { "content": " def test_handle_error(self):\n\n class TestClient(BaseClient):\n def handle_write(self):\n 1.0 / 0\n def handle_error(self):\n self.flag = True\n try:\n raise\n except ZeroDivisionError:\n pass\n else:\n raise Exception(\"exception not raised\")\n\n server = BaseServer(self.family, self.addr)\n client = TestClient(self.family, server.address)\n self.loop_waiting_for_flag(client)", "metadata": "root.BaseTestAPI.test_handle_error", "header": "['class', 'BaseTestAPI', ':', '___EOS___']", "index": 689 } ]	[ { "span": "self.fail(\"Expected exception\")", "start_line": 228, "start_column": 12, "end_line": 228, "end_column": 43 }, { "span": "raise Exception(\"exception not raised\")", "start_line": 701, "start_column": 20, "end_line": 701, "end_column": 59 } ]	[]	1	true	[ "[CLS]_", "Unrea", "chab", "le_", "code_", "[SEP]_", "class_", "Help", "er", "Function", "Tests_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "compact", "\\u", "traceback_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "try_", ":_", 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Variable defined multiple times	networkx/networkx/networkx/algorithms/tests/test_cycles.py	[ { "content": " def test_cycle_basis(self):\n G=self.G\n cy=networkx.cycle_basis(G,0)\n sort_cy= sorted( sorted(c) for c in cy )\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5]])\n cy=networkx.cycle_basis(G,1)\n sort_cy= sorted( sorted(c) for c in cy )\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5]])\n cy=networkx.cycle_basis(G,9)\n sort_cy= sorted( sorted(c) for c in cy )\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5]])\n # test disconnected graphs\n nx.add_cycle(G, \"ABC\")\n cy=networkx.cycle_basis(G,9)\n sort_cy= sorted(sorted(c) for c in cy[:-1]) + [sorted(cy[-1])]\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5],['A','B','C']])", "metadata": "root.TestCycles.test_cycle_basis", "header": "['class', 'TestCycles', ':', '___EOS___']", "index": 25 }, { "content": " @raises(nx.NetworkXNotImplemented)\n def test_cycle_basis(self):\n G=nx.DiGraph()\n cy=networkx.cycle_basis(G,0)", "metadata": "root.TestCycles.test_cycle_basis", "header": "['class', 'TestCycles', ':', '___EOS___']", "index": 42 }, { "content": " def test_multidigraph_ignore2(self):\n # Loop traversed an edge while ignoring its orientation.\n G = nx.MultiDiGraph([(0,1), (1,2), (1,2)])\n x = list(find_cycle(G, [0,1,2], orientation='ignore'))\n x_ = [(1,2,0,FORWARD), (1,2,1,REVERSE)]\n assert_equal(x, x_)", "metadata": "root.TestFindCycle.test_multidigraph_ignore2", "header": "['class', 'TestFindCycle', '(', 'object', ')', ':', '___EOS___']", "index": 192 }, { "content": " def test_multidigraph_ignore2(self):\n # Node 2 doesn't need to be searched again from visited from 4.\n # The goal here is to cover the case when 2 to be researched from 4,\n # when 4 is visited from the first time (so we must make sure that 4\n # is not visited from 2, and hence, we respect the edge orientation).\n G = nx.MultiDiGraph([(0,1), (1,2), (2,3), (4,2)])\n assert_raises(nx.exception.NetworkXNoCycle,\n find_cycle, G, [0,1,2,3,4], orientation='original')", "metadata": "root.TestFindCycle.test_multidigraph_ignore2", "header": "['class', 'TestFindCycle', '(', 'object', ')', ':', '___EOS___']", "index": 199 } ]	[ { "span": "test_cycle_basis(", "start_line": 25, "start_column": 8, "end_line": 25, "end_column": 24 }, { "span": "test_multidigraph_ignore2(", "start_line": 192, "start_column": 8, "end_line": 192, "end_column": 33 } ]	[ { "span": "test_cycle_basis(", "start_line": 43, "start_column": 8, "end_line": 43, "end_column": 24 }, { "span": "test_multidigraph_ignore2(", "start_line": 199, "start_column": 8, "end_line": 199, "end_column": 33 } ]	1	true	[ "[CLS]_", "Variable_", "defined_", "multiple_", "times_", "[SEP]_", "class_", "Test", "Cycle", "s_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "cycle", "\\u", "basis_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", 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Unused local variable	django-import-export/django-import-export/tests/core/tests/resources_tests.py	[ { "content": " def test_link_to_nonexistent_field(self):\n with self.assertRaises(FieldDoesNotExist) as cm:\n class BrokenBook1(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('nonexistent__invalid',)\n self.assertEqual(\"Book.nonexistent: Book has no field named 'nonexistent'\",\n cm.exception.args[0])\n\n with self.assertRaises(FieldDoesNotExist) as cm:\n class BrokenBook2(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('author__nonexistent',)\n self.assertEqual(\"Book.author.nonexistent: Author has no field named \"\n \"'nonexistent'\", cm.exception.args[0])", "metadata": "root.ModelResourceTest.test_link_to_nonexistent_field", "header": "['class', 'ModelResourceTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 502 }, { "content": " def test_link_to_nonrelation_field(self):\n with self.assertRaises(KeyError) as cm:\n class BrokenBook1(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('published__invalid',)\n self.assertEqual(\"Book.published is not a relation\",\n cm.exception.args[0])\n\n with self.assertRaises(KeyError) as cm:\n class BrokenBook2(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('author__name__invalid',)\n self.assertEqual(\"Book.author.name is not a relation\",\n cm.exception.args[0])", "metadata": "root.ModelResourceTest.test_link_to_nonrelation_field", "header": "['class', 'ModelResourceTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 519 } ]	[ { "span": "BrokenBook1(", "start_line": 504, "start_column": 18, "end_line": 504, "end_column": 29 }, { "span": "BrokenBook2(", "start_line": 512, "start_column": 18, "end_line": 512, "end_column": 29 }, { "span": "BrokenBook1(", "start_line": 521, "start_column": 18, "end_line": 521, "end_column": 29 }, { "span": "BrokenBook2(", "start_line": 529, "start_column": 18, "end_line": 529, "end_column": 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Except block handles 'BaseException'	GeoscienceAustralia/agdc/src/stacker.py	[ { "content": " def __init__(self, source_datacube=None, default_tile_type_id=1):\n \"\"\"Constructor\n Arguments:\n source_datacube: Optional DataCube object whose connection and data will be shared\n tile_type_id: Optional tile_type_id value (defaults to 1)\n \"\"\"\n \n if source_datacube:\n # Copy values from source_datacube and then override command line args\n self.__dict__ = copy(source_datacube.__dict__)\n \n args = self.parse_args()\n # Set instance attributes for every value in command line arguments file\n for attribute_name in args.__dict__.keys():\n attribute_value = args.__dict__[attribute_name]\n self.__setattr__(attribute_name, attribute_value)\n\n else:\n DataCube.__init__(self) # Call inherited constructor\n \n if self.debug:\n console_handler.setLevel(logging.DEBUG)\n \n # Attempt to parse dates from command line arguments or config file\n try:\n self.default_tile_type_id = int(self.default_tile_type_id) \n except:\n self.default_tile_type_id = default_tile_type_id # Use function argument value if not in command-line args\n try:\n self.start_date = datetime.strptime(self.start_date, '%Y%m%d').date()\n except:\n try:\n self.start_date = datetime.strptime(self.start_date, '%d/%m/%Y').date()\n except:\n self.start_date = None \n try:\n self.end_date = datetime.strptime(self.end_date, '%Y%m%d').date()\n except:\n try:\n self.end_date = datetime.strptime(self.end_date, '%d/%m/%Y').date()\n except:\n self.end_date= None \n try:\n self.x_index = int(self.x_index) \n except:\n self.x_index = None\n try:\n self.y_index = int(self.y_index) \n except:\n self.y_index = None\n\n # Path/Row values to permit single-scene stacking\n try:\n self.path = int(self.path) \n except:\n self.path = None\n try:\n self.row = int(self.row) \n except:\n self.row = None\n \n # Other variables set from config file only - not used\n try:\n self.min_path = int(self.min_path) \n except:\n self.min_path = None\n try:\n self.max_path = int(self.max_path) \n except:\n self.max_path = None\n try:\n self.min_row = int(self.min_row) \n except:\n self.min_row = None\n try:\n self.max_row = int(self.max_row) \n except:\n self.max_row = None\n\n # Create nested dict for given lookup_scheme_name with levels keyed by:\n # tile_type_id, satellite_tag, sensor_name, level_name, band_tag\n band_lookup = BandLookup(self) # Don't bother initialising it - we only want the lookup dict\n self.band_lookup_dict = band_lookup.band_lookup_dict[self.band_lookup_scheme]", "metadata": "root.Stacker.__init__", "header": "['class', 'Stacker', '(', 'DataCube', ')', ':', '___EOS___']", "index": 138 } ]	[ { "span": "except:", "start_line": 164, "start_column": 8, "end_line": 164, "end_column": 15 }, { "span": "except:", "start_line": 168, "start_column": 8, "end_line": 168, "end_column": 15 }, { "span": "except:", "start_line": 171, "start_column": 12, "end_line": 171, "end_column": 19 }, { "span": "except:", "start_line": 175, "start_column": 8, "end_line": 175, "end_column": 15 }, { "span": "except:", "start_line": 178, "start_column": 12, "end_line": 178, "end_column": 19 }, { "span": "except:", "start_line": 182, "start_column": 8, "end_line": 182, "end_column": 15 }, { "span": "except:", "start_line": 186, "start_column": 8, "end_line": 186, "end_column": 15 }, { "span": "except:", "start_line": 192, "start_column": 8, "end_line": 192, "end_column": 15 }, { "span": "except:", "start_line": 196, "start_column": 8, "end_line": 196, "end_column": 15 }, { "span": "except:", "start_line": 202, "start_column": 8, "end_line": 202, "end_column": 15 }, { "span": "except:", "start_line": 206, "start_column": 8, "end_line": 206, "end_column": 15 }, { "span": "except:", "start_line": 210, "start_column": 8, "end_line": 210, "end_column": 15 }, { "span": "except:", "start_line": 214, "start_column": 8, "end_line": 214, "end_column": 15 } ]	[]	1	true	[ "[CLS]_", "Except", "_", 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Unused import	DexterInd/GrovePi/Projects/OLED_Weather Station/weather_station.py	[ { "content": "# Adapted from home_temp_hum_display.py\n'''\n\nThe MIT License (MIT)\n\nGrovePi for the Raspberry Pi: an open source platform for connecting Grove Sensors to the Raspberry Pi.\nCopyright (C) 2015 Dexter Industries\n\nPermission is hereby granted, free of charge, to any person obtaining a copy\nof this software and associated documentation files (the \"Software\"), to deal\nin the Software without restriction, including without limitation the rights\nto use, copy, modify, merge, publish, distribute, sublicense, and/or sell\ncopies of the Software, and to permit persons to whom the Software is\nfurnished to do so, subject to the following conditions:\n\nThe above copyright notice and this permission notice shall be included in\nall copies or substantial portions of the Software.\n\nTHE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\nIMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\nFITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE\nAUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\nLIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,\nOUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN\nTHE SOFTWARE.\n\n'''\n\nfrom grovepi import \nfrom grove_oled import \n\nimport threading\n\ndht_sensor_port = 7 # Connect the DHt sensor to port 7\n\n#Start and initialize the OLED\noled_init()\noled_clearDisplay()\noled_setNormalDisplay()\noled_setVerticalMode()\ntime.sleep(.1)\n\n\n\n\n\nwhile True:\n try:\n # Get the temperature and Humidity from the DHT sensor\n [temp, hum] = dht(dht_sensor_port, 1)\n print((\"Temp =\", temp, \"C\\tHumidity =\", hum, \"%\"))\n t = str(temp)\n h = str(hum)\n\n #outside_thread = threading.Thread(target=update_outside_weather)\n #outside_thread.start()\n\n oled_setTextXY(0, 1) # Print \"INSIDE\" at line 1\n oled_putString(\"INSIDE\")\n\n oled_setTextXY(2, 0) # Print \"TEMP\" and the temperature in line 3\n oled_putString(\"Temp:\")\n oled_putString(t + \"C\")\n\n oled_setTextXY(3, 0) # Print \"HUM :\" and the humidity in line 4\n oled_putString(\"Hum :\")\n oled_putString(h + \"%\")\n\n #outside_thread.join()\n update_outside_weather()\n\n except (IOError, TypeError, Exception) as e:\n print((\"Error:\" + str(e)))\n finally:\n #outside_thread.join()\n pass\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def get_outside_weather(location='Bucharest,ro'):\n import pyowm # Do a 'sudo pip install pyowm' to get this module\n\n owm = pyowm.OWM()\n\n #forecast = owm.daily_forecast(location)\n\n observation = owm.weather_at_place(location)\n weather = observation.get_weather()\n\n return weather", "metadata": "root.get_outside_weather", "header": "['module', '___EOS___']", "index": 43 }, { "content": "def update_outside_weather():\n # This uses OpenWeatherMap via the PyOWM module;\n # pywom module needs to be installed via pip,\n # see https://github.com/csparpa/pyowm\n weather = get_outside_weather()\n # by default location is Bucharest,ro; change it to your own\n\n oled_setTextXY(5, 1)\n oled_putString(\"OUTSIDE\")\n\n oled_setTextXY(7, 0)\n oled_putString(\"Temp:\")\n oled_putString(str(weather.get_temperature(\"celsius\")['temp']) + \"C\")\n\n oled_setTextXY(8, 0)\n oled_putString(\"Hum :\")\n oled_putString(str(weather.get_humidity()) + \"%\")\n\n oled_setTextXY(9, 0)\n oled_putString(\"Rain:\")\n\n rain = weather.get_rain()\n if len(rain) > 0:\n pass\n else:\n oled_putString(\"0%\")\n\n print((\"Weather: \", weather.get_temperature(\"celsius\")))\n print((\"Humidity: \", weather.get_humidity()))", "metadata": "root.update_outside_weather", "header": "['module', '___EOS___']", "index": 56 } ]	[ { "span": "import threading", "start_line": 31, "start_column": 0, "end_line": 31, "end_column": 16 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "#", " ", "Adapt", 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Unused import	rlpy/rlpy/rlpy/__init__.py	[ { "content": "import rlpy.Agents\nimport rlpy.Tools\nimport rlpy.Domains\nimport rlpy.MDPSolvers\nimport rlpy.Experiments\nimport rlpy.Policies\nimport rlpy.Representations\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]	[ { "span": "import rlpy.Agents", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 18 }, { "span": "import rlpy.Tools", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 17 }, { "span": "import rlpy.Domains", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 19 }, { "span": "import rlpy.MDPSolvers", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 22 }, { "span": "import rlpy.Experiments", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 23 }, { "span": "import rlpy.Policies", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 20 }, { "span": "import rlpy.Representations", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 27 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "import_", "rlp", "y_", "._", "Agent", "s_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "rlp", "y_", "._", "Tools_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "rlp", "y_", "._", "Doma", "ins_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "rlp", "y_", "._", "MD", "PS", "olve", "rs_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "rlp", "y_", "._", "Experiment", "s_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "rlp", "y_", "._", "Polic", "ies_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "rlp", "y_", "._", "Representation", "s_" ]	[ 4, 4, 4, 4, 4, 2, 2, 0, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1 ]
Unused import	sccn/SNAP/src/modules/Sample3.py	[ { "content": "from framework.latentmodule import LatentModule\nimport random\nimport time\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Main(LatentModule):\n", "metadata": "root.Main", "header": "['module', '___EOS___']", "index": 4 }, { "content": " def __init__(self):\n LatentModule.__init__(self)\n \n # set defaults for some configurable parameters:\n self.speed = 2", "metadata": "root.Main.__init__", "header": "['class', 'Main', '(', 'LatentModule', ')', ':', '___EOS___']", "index": 5 }, { "content": " def run(self):\n self.write('In the next part, please hit the A key whenever the ball hits the ground!\\nSpace when ready.','space')\n watcher = self.watchfor_multiple_begin(['a'])\n \n vel = [self.speed,0] # velocity\n pos = [-0.7,0.7] # position\n \n ball = self.picture('ball.png',duration=10000,scale=0.03,pos=pos,block=False)\n now = time.time()\n t_end = now + 20\n while True:\n # calc amount of time passed\n dt = time.time() - now \n now = time.time()\n if now > t_end:\n break\n \n # move the ball\n pos[0] += vel[0] * dt\n pos[1] += vel[1] * dt\n ball.setPos(pos[0],0,pos[1])\n # decelerate the ball and apply gravity\n vel[0] = vel[0]0.98dt\n vel[1] = vel[1]0.98*dt - 2dt\n # bounce\n if abs(pos[0]) > base.getAspectRatio():\n vel[0] = abs(vel[0]) * (-1 if pos[0]>0 else +1)\n if abs(pos[1]) > 1:\n vel[1] = abs(vel[1]) * (-1 if pos[1]>0 else +1)\n \n self.sleep(0.01)\n ball.destroy()\n \n results = self.watchfor_multiple_end(watcher)\n self.write('You pressed the A key at the following times:\\n%s\\n. Press space to end the experiment.' % str(results['a']),'space')\n self.write('You have successfully completed the experiment!')", "metadata": "root.Main.run", "header": "['class', 'Main', '(', 'LatentModule', ')', ':', '___EOS___']", "index": 11 } ]	[ { "span": "import random", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 13 } ]	[]	1	false	[ "[CLS]_", "Un", "used_", "import_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "from_", "framework_", "._", "latent", "module_", "import_", "Late", "nt", "Module_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "random_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "time_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "[SEP]_", "module_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "class_", "Main_", "(_", "Late", "nt", "Module_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "[SEP]_", "class_", "Main_", 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"end_", "=_", "now_", "+_", "20_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "while_", "True_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "calc", " ", "amo", "unt", " ", "of", " ", "time", " ", "passed_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "dt_", "=_", "time_", "._", "time_", "(_", ")_", "-_", "now_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "now_", "=_", "time_", "._", "time_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "if_", "now_", ">_", "t", "\\u", "end_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "break_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "#", " ", "move", " ", "the", " ", "ball_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "pos_", "[_", "0_", "]_", "+=_", "vel_", "[_", "0_", "]_", "_", "dt_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "pos_", "[_", "1_", "]_", "+=_", "vel_", "[_", "1_", "]_", "_", "dt_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "ball_", "._", "set", "Pos_", "(_", "pos_", "[_", "0_", "]_", ",_", "0_", ",_", "pos_", "[_", "1_", "]_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "dece", "ler", "ate", " ", "the", " ", "bal", "l", " ", "and", " ", "appl", "y", " ", "gravity", "_", "\\u\\u\\uNL\\u\\u\\u_", "vel_", "[_", "0_", "]_", "=_", "vel_", "[_", "0_", "]_", "_", "0.98", "_", "_", "dt_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "vel_", "[_", "1_", "]_", "=_", "vel_", "[_", "1_", "]_", "_", "0.98", "_", "*_", "dt_", "-_", "2_", "_", "dt_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "#", " ", "bounce", "_", "\\u\\u\\uNL\\u\\u\\u_", "if_", "abs_", "(_", "pos_", "[_", "0_", "]_", ")_", ">_", "base_", "._", "get", "Asp", "ect", "Ratio_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "vel_", "[_", "0_", "]_", "=_", "abs_", "(_", "vel_", "[_", "0_", "]_", ")_", "_", "(_", "-_", "1_", "if_", "pos_", "[_", "0_", "]_", ">_", "0_", "else_", "+_", "1_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "if_", "abs_", "(_", "pos_", "[_", "1_", "]_", ")_", ">_", "1_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "vel_", "[_", "1_", "]_", "=_", "abs_", "(_", "vel_", "[_", "1_", "]_", ")_", "_", "(_", "-_", "1_", "if_", "pos_", "[_", "1_", "]_", ">_", "0_", "else_", "+_", "1_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "self_", "._", "sleep_", "(_", "0.01_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "ball_", "._", "destroy_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "results_", "=_", "self_", "._", "watch", "for", "\\u", "multiple", "\\u", "end_", "(_", "watcher_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "write_", "(_", "'", "You", " ", "presse", "d", " ", "the", " ", "A", " ", "key", " ", "at", " ", "the", " ", "follow", "ing", " ", "times", ":\\\\", "n", "%", "s", "\\\\", "n", ".", " ", "Press", " ", "space", " ", "to", " ", "end", " ", "the", " ", "experiment", ".'_", "%_", "str_", "(_", "results_", "[_", "'", "a", "'_", "]_", ")_", ",_", "'", "space", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "self_", "._", "write_", "(_", "'", "You", " ", "have", " ", "success", "full", "y", " ", "complete", "d", " ", "the", " ", "experiment", "!'_", ")_" ]	[ 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Unused local variable

deanhiller/databus/webapp/play1.3.x/python/Lib/posixpath.py

[ { "content": "def lexists(path):\n \"\"\"Test whether a path exists. Returns True for broken symbolic links\"\"\"\n try:\n st = os.lstat(path)\n except os.error:\n return False\n return True", "metadata": "root.lexists", "header": "['module', '___EOS___']", "index": 138 } ]

[ { "span": "st ", "start_line": 141, "start_column": 8, "end_line": 141, "end_column": 10 } ]

[]

1

true

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Testing equality to None

tucker777/QSTK/qstklearn/kdtknn.py

[ { "content": " def addEvidence(self,dataX,dataY=None):\n \"\"\"\n @summary: Add training data\n @param dataX: Data to add, either entire set with classification as last column, or not if\n the Y data is provided explicitly. Must be same width as previously appended data.\n @param dataY: Optional, can be used \n \n 'data' should be a numpy array matching the same dimensions as any data \n provided in previous calls to addEvidence, with dataY as the \n training label.\n \"\"\"\n \n ''' Slap on Y column if it is provided, if not assume it is there '''\n if not dataY == None:\n data = numpy.zeros([dataX.shape[0],dataX.shape[1]+1])\n data[:,0:dataX.shape[1]]=dataX\n data[:,(dataX.shape[1])]=dataY\n else:\n data = dataX\n \n self.rebuild_tree = True\n if self.data is None:\n self.data = data\n else:\n self.data = numpy.append(self.data,data,axis=0)", "metadata": "root.kdtknn.addEvidence", "header": "['class', 'kdtknn', '(', 'object', ')', ':', '___EOS___']", "index": 34 } ]

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[]

1

true

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Unnecessary pass

hwaf/hwaf/py-hwaftools/find_iberty.py

[ { "content": "@conf\ndef find_iberty(ctx, **kwargs):\n \n ctx.load('hwaf-base', tooldir=_heptooldir)\n\n if not ctx.env.HWAF_FOUND_C_COMPILER:\n ctx.fatal('load a C compiler first')\n pass\n\n if not ctx.env.HWAF_FOUND_GDB:\n # gdb might have installed interesting libs (iberty, bfd)\n ctx.find_gdb(mandatory=False)\n pass\n \n extra_paths = waflib.Utils.to_list(kwargs.get('extra_paths',[]))\n if ctx.env.GDB_HOME:\n gdb = ctx.hwaf_subst_vars('${GDB_HOME}')\n extra_paths.append(gdb)\n pass\n\n # find libiberty\n ctx.check_with(\n ctx.check,\n \"iberty\",\n features='c cstlib',\n header_name=\"libiberty.h\",\n stlib='iberty',\n uselib_store='iberty',\n **kwargs\n )\n \n if ctx.env.LIBPATH_iberty and 0:\n ctx.env.STLIBPATH_iberty = ctx.env.LIBPATH_iberty\n ctx.env.STLIB_iberty = ctx.env.LIB_iberty\n ctx.env.LIB_iberty = []\n ctx.env.LIBPATH_iberty = []\n pass\n\n ctx.env.HWAF_FOUND_IBERTY = 1\n return", "metadata": "root.find_iberty", "header": "['module', '___EOS___']", "index": 24 } ]

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[]

1

true

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Unused local variable

saltstack/salt/tests/unit/pyobjects_test.py

[ { "content": " def test_import_scope(self):\n self.write_template_file(\"map.sls\", map_template)\n self.write_template_file(\"recursive_map.sls\", recursive_map_template)\n\n def do_render():\n ret = self.render(scope_test_import_template,\n {'grains': {\n 'os_family': 'Debian',\n 'os': 'Debian'\n }})\n\n self.assertRaises(NameError, do_render)", "metadata": "root.RendererTests.test_import_scope", "header": "['class', 'RendererTests', '(', 'RendererMixin', ',', 'StateTests', ')', ':', '___EOS___']", "index": 349 }, { "content": " def test_random_password(self):\n '''Test for https://github.com/saltstack/salt/issues/21796'''\n ret = self.render(random_password_template)", "metadata": "root.RendererTests.test_random_password", "header": "['class', 'RendererTests', '(', 'RendererMixin', ',', 'StateTests', ')', ':', '___EOS___']", "index": 362 }, { "content": " def test_import_random_password(self):\n '''Import test for https://github.com/saltstack/salt/issues/21796'''\n self.write_template_file(\"password.sls\", random_password_template)\n ret = self.render(random_password_import_template)", "metadata": "root.RendererTests.test_import_random_password", "header": "['class', 'RendererTests', '(', 'RendererMixin', ',', 'StateTests', ')', ':', '___EOS___']", "index": 366 } ]

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[]

1

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Unused import

fp7-ofelia/ocf/expedient/doc/plugins/samples/plugin/sample_resource/controller/GUIdispatcher.py

[ { "content": "\"\"\"\nGraphical user interface functionalities for the\nSampleResource Aggregate Manager.\n\n@date: Jun 12, 2013\n@author: CarolinaFernandez\n\"\"\"\n\nfrom django.core.exceptions import ValidationError\nfrom django.core.urlresolvers import reverse\nfrom django.http import HttpResponseRedirect, HttpResponse\nfrom django.shortcuts import get_object_or_404\nfrom expedient.clearinghouse.aggregate.models import Aggregate\nfrom expedient.clearinghouse.slice.models import Slice\nfrom expedient.common.messaging.models import DatedMessage\nfrom expedient.common.utils.plugins.plugincommunicator import *\nfrom expedient.common.utils.plugins.resources.link import Link\nfrom expedient.common.utils.plugins.resources.node import Node\nfrom expedient.common.utils.views import generic_crud\nfrom sample_resource.controller.resource import SampleResource as SampleResourceController\nfrom sample_resource.forms.SampleResource import SampleResource as SampleResourceModelForm\nfrom sample_resource.models import SampleResource as SampleResourceModel,\\\n SampleResourceAggregate as SampleResourceAggregateModel\n\nimport copy\nimport logging\nimport xmlrpclib\n\n\n\n\n###\n# Topology to show in the Expedient\n#\n\n\n\n\n\n#from expedient.common.utils.plugins.plugininterface import PluginInterface\n#\n#class Plugin(PluginInterface):\n# @staticmethod\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def create_resource(request, slice_id, agg_id):\n \"\"\"Show a page that allows user to add a SampleResource to the aggregate.\"\"\"\n\n if request.method == \"POST\":\n # Shows error message when aggregate unreachable, disable SampleResource creation and get back to slice detail page\n agg = Aggregate.objects.get(id = agg_id)\n if agg.check_status() == False:\n DatedMessage.objects.post_message_to_user(\n \"SampleResource Aggregate '%s' is not available\" % agg.name,\n request.user, msg_type=DatedMessage.TYPE_ERROR,)\n return HttpResponseRedirect(reverse(\"slice_detail\", args=[slice_id]))\n\n if 'create_resource' in request.POST:\n return HttpResponseRedirect(reverse(\"sample_resource_resource_crud\", args=[slice_id, agg_id]))\n else:\n return HttpResponseRedirect(reverse(\"slice_detail\", args=[slice_id]))", "metadata": "root.create_resource", "header": "['module', '___EOS___']", "index": 28 }, { "content": "def resource_crud(request, slice_id, agg_id, resource_id = None):\n \"\"\"\n Show a page that allows user to create/edit SampleResource's to the Aggregate.\n \"\"\"\n slice = get_object_or_404(Slice, id = slice_id)\n aggregate = Aggregate.objects.get(id = agg_id)\n error_crud = \"\"\n\n def pre_save(instance, created):\n \"\"\"\n Fills SampleResource instance prior to its saving.\n Used within the scope of the generic_crud method.\n \"\"\"\n instance = SampleResourceController.fill(instance, slice, agg_id, resource_id)\n\n try:\n return generic_crud(request, obj_id=resource_id, model=SampleResourceModel,\n form_class=SampleResourceModelForm,\n template=\"sample_resource_resource_crud.html\",\n redirect=lambda inst: reverse(\"slice_detail\", args=[slice_id]),\n extra_context={\"agg\": aggregate, \"slice\": slice, \"exception\": error_crud, \"breadcrumbs\": (\n (\"Home\", reverse(\"home\")),\n (\"Project %s\" % slice.project.name, reverse(\"project_detail\", args=[slice.project.id])),\n (\"Slice %s\" % slice.name, reverse(\"slice_detail\", args=[slice_id])),\n (\"%s SampleResource\" % \"Update\" if resource_id else \"Create\", reverse(\"sample_resource_resource_crud\", args=[slice_id, agg_id])),)\n }, extra_form_params={}, template_object_name=\"object\", pre_save=pre_save,\n post_save=None, success_msg=None)\n except ValidationError as e:\n # Django exception message handling is different to Python's...\n error_crud = \";\".join(e.messages)\n except Exception as e:\n print \"[WARNING] Could not create resource in plugin 'sample_resource'. Details: %s\" % str(e)\n DatedMessage.objects.post_message_to_user(\n \"SampleResource might have been created, but some problem ocurred: %s\" % str(e),\n request.user, msg_type=DatedMessage.TYPE_ERROR)\n return HttpResponseRedirect(reverse(\"slice_detail\", args=[slice_id]))", "metadata": "root.resource_crud", "header": "['module', '___EOS___']", "index": 45 }, { "content": "def manage_resource(request, resource_id, action_type):\n \"\"\"\n Manages the actions executed over SampleResource's.\n \"\"\"\n if action_type == \"delete\":\n SampleResourceController.delete(resource_id)\n # Go to manage resources again\n return HttpResponse(\"\")", "metadata": "root.manage_resource", "header": "['module', '___EOS___']", "index": 82 }, { "content": "def get_sr_list(slice):\n return SampleResourceModel.objects.filter(slice_id = slice.uuid)", "metadata": "root.get_sr_list", "header": "['module', '___EOS___']", "index": 95 }, { "content": "def get_sr_aggregates(slice):\n sr_aggs = []\n try:\n sr_aggs = slice.aggregates.filter(leaf_name=SampleResourceAggregateModel.__name__.lower())\n except:\n pass\n return sr_aggs", "metadata": "root.get_sr_aggregates", "header": "['module', '___EOS___']", "index": 98 }, { "content": "def get_node_description(node):\n description = \"<strong>Sample Resource: \" + node.name + \"</strong><br/><br/>\"\n description += \" Temperature: %s (°%s)\" % (str(node.get_temperature()), str(node.get_temperature_scale()))\n connections = \"\"\n node_connections = node.get_connections()\n for i, connection in enumerate(node_connections):\n connections += connection.name\n if i < len(node_connections)-1:\n connections += \", \"\n description += \"<br/> Connected to: %s\" % str(connections)\n return description", "metadata": "root.get_node_description", "header": "['module', '___EOS___']", "index": 106 }, { "content": "def get_nodes_links(slice, chosen_group=None):\n nodes = []\n links = []\n sr_aggs = get_sr_aggregates(slice)\n\n # Getting image for the nodes\n # FIXME: avoid to ask the user for the complete name of the method here! he should NOT know it\n try:\n image_url = reverse('img_media_sample_resource', args=(\"sensor-tiny.png\",))\n except:\n image_url = 'sensor-tiny.png'\n\n # For every SampleResource AM\n for i, sr_agg in enumerate(sr_aggs):\n sr_agg = sr_agg.sampleresourceaggregate\n # Iterates over every SampleResource contained within the slice\n for sr in sr_agg.get_resources():\n sr = sr.sampleresource\n nodes.append(Node(\n # Users shall not be left the choice to choose group/island; otherwise collision may arise\n name = sr.name, value = sr.id, aggregate = sr.aggregate, type = \"Sample resource\",\n description = get_node_description(sr), image = image_url)\n )\n for connection in sr.get_connections():\n # Two-ways link\n links.append(\n Link(\n target = str(sr.id), source = str(connection.id),\n value = \"rsc_id_%s-rsc_id_%s\" % (connection.id, sr.id)\n ),\n )\n links.append(\n Link(\n target = str(sr.id), source = str(connection.id),\n value = \"rsc_id_%s-rsc_id_%s\" % (sr.id, connection.id)\n ),\n )\n return [nodes, links]", "metadata": "root.get_nodes_links", "header": "['module', '___EOS___']", "index": 118 }, { "content": "def get_ui_data(slice):\n \"\"\"\n Hook method. Use this very same name so Expedient can get the resources for every plugin.\n \"\"\"\n ui_context = dict()\n try:\n ui_context['sr_list'] = get_sr_list(slice)\n ui_context['sr_aggs'] = get_sr_aggregates(slice)\n ui_context['nodes'], ui_context['links'] = get_nodes_links(slice)\n except Exception as e:\n print \"[ERROR] Problem loading UI data for plugin 'sample_resource'. Details: %s\" % str(e)\n return ui_context", "metadata": "root.get_ui_data", "header": "['module', '___EOS___']", "index": 161 } ]

[ { "span": "import copy", "start_line": 24, "start_column": 0, "end_line": 24, "end_column": 11 }, { "span": "import logging", "start_line": 25, "start_column": 0, "end_line": 25, "end_column": 14 }, { "span": "import xmlrpclib", "start_line": 26, "start_column": 0, "end_line": 26, "end_column": 16 } ]

[]

1

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Imprecise assert

adlnet/ADL_LRS/lrs/tests/test_AgentManager.py

[ { "content": " def test_agent_format(self):\n ot_s = \"Agent\"\n name_s = \"superman\"\n mbox_s = \"mailto:[email protected]\"\n kwargs_s = {\"objectType\":ot_s,\"name\":name_s,\"mbox\":mbox_s}\n clark, created = Agent.objects.retrieve_or_create(**kwargs_s)\n self.assertTrue(created)\n clark.save()\n self.assertEquals(clark.objectType, ot_s)\n self.assertEquals(clark.name, name_s)\n self.assertEquals(clark.mbox, mbox_s)\n\n clark_exact = clark.to_dict()\n self.assertEquals(clark_exact['objectType'], ot_s)\n self.assertEquals(clark_exact['name'], name_s)\n self.assertEquals(clark_exact['mbox'], mbox_s)\n\n clark_ids = clark.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(clark_ids), \"object type was found in agent json\")\n self.assertFalse('name' in str(clark_ids), \"name was found in agent json\")\n self.assertEquals(clark_ids['mbox'], mbox_s)\n\n ot_ww = \"Agent\"\n name_ww = \"wonder woman\"\n mbox_sha1sum_ww = hashlib.sha1(\"mailto:[email protected]\").hexdigest()\n kwargs_ww = {\"objectType\":ot_ww,\"name\":name_ww,\"mbox_sha1sum\":mbox_sha1sum_ww}\n diana, created = Agent.objects.retrieve_or_create(**kwargs_ww)\n self.assertTrue(created)\n diana.save()\n self.assertEquals(diana.objectType, ot_ww)\n self.assertEquals(diana.name, name_ww)\n self.assertEquals(diana.mbox_sha1sum, mbox_sha1sum_ww)\n\n diana_exact = diana.to_dict()\n self.assertEquals(diana_exact['objectType'], ot_ww)\n self.assertEquals(diana_exact['name'], name_ww)\n self.assertEquals(diana_exact['mbox_sha1sum'], mbox_sha1sum_ww)\n\n diana_ids = diana.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(diana_ids), \"object type was found in agent json\")\n self.assertFalse('name' in str(diana_ids), \"name was found in agent json\")\n self.assertFalse('mbox' in diana_ids.items(), \"mbox was found in agent json\")\n self.assertEquals(diana_ids['mbox_sha1sum'], mbox_sha1sum_ww)\n\n ot_b = \"Agent\"\n name_b = \"batman\"\n openid_b = \"id:batman\"\n kwargs_b = {\"objectType\":ot_b,\"name\":name_b,\"openid\":openid_b}\n bruce, created = Agent.objects.retrieve_or_create(**kwargs_b)\n self.assertTrue(created)\n bruce.save()\n self.assertEquals(bruce.objectType, ot_b)\n self.assertEquals(bruce.name, name_b)\n self.assertEquals(bruce.openid, openid_b)\n\n bruce_exact = bruce.to_dict()\n self.assertEquals(bruce_exact['objectType'], ot_b)\n self.assertEquals(bruce_exact['name'], name_b)\n self.assertEquals(bruce_exact['openid'], openid_b)\n\n bruce_ids = bruce.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(bruce_ids), \"object type was found in agent json\")\n self.assertFalse('name' in str(bruce_ids), \"name was found in agent json\")\n self.assertFalse('mbox' in str(bruce_ids), \"mbox was found in agent json\")\n self.assertFalse('mbox_sha1sum' in str(bruce_ids), \"mbox_sha1sum was found in agent json\")\n self.assertEquals(bruce_ids['openid'], openid_b)\n\n ot_f = \"Agent\"\n name_f = \"the flash\"\n account_f = {\"homePage\":\"http://ultrasecret.justiceleague.com/accounts/\", \"name\":\"theflash\"}\n kwargs_f = {\"objectType\":ot_f,\"name\":name_f,\"account\":account_f}\n barry, created = Agent.objects.retrieve_or_create(**kwargs_f)\n self.assertTrue(created)\n barry.save()\n self.assertEquals(barry.objectType, ot_f)\n self.assertEquals(barry.name, name_f)\n self.assertEquals(barry.account_homePage, account_f['homePage'])\n self.assertEquals(barry.account_name, account_f['name'])\n\n barry_exact = barry.to_dict()\n self.assertEquals(barry_exact['objectType'], ot_f)\n self.assertEquals(barry_exact['name'], name_f)\n self.assertEquals(barry_exact['account']['homePage'], account_f['homePage'])\n self.assertEquals(barry_exact['account']['name'], account_f['name'])\n\n barry_ids = barry.to_dict(ids_only=True)\n self.assertFalse('objectType' in str(barry_ids), \"object type was found in agent json\")\n self.assertFalse('name' in barry_ids.items(), \"name was found in agent json\")\n self.assertFalse('mbox' in barry_ids.items(), \"mbox was found in agent json\")\n self.assertFalse('mbox_sha1sum' in str(barry_ids), \"mbox_sha1sum was found in agent json\")\n self.assertFalse('openid' in str(barry_ids), \"openid was found in agent json\")\n self.assertEquals(barry_ids['account']['homePage'], account_f['homePage'])\n self.assertEquals(barry_ids['account']['name'], account_f['name'])\n\n ot_j = \"Group\"\n name_j = \"Justice League\"\n mbox_j = \"mailto:[email protected]\"\n kwargs_j = {\"objectType\":ot_j,\"name\":name_j,\"mbox\":mbox_j, \"member\":[kwargs_s,kwargs_ww,kwargs_f,kwargs_b]}\n justiceleague, created = Agent.objects.retrieve_or_create(**kwargs_j)\n self.assertTrue(created)\n justiceleague.save()\n self.assertEquals(justiceleague.objectType, ot_j)\n self.assertEquals(justiceleague.name, name_j)\n self.assertEquals(justiceleague.mbox, mbox_j)\n\n justiceleague_exact = justiceleague.to_dict()\n self.assertEquals(justiceleague_exact['objectType'], ot_j)\n self.assertEquals(justiceleague_exact['name'], name_j)\n self.assertEquals(justiceleague_exact['mbox'], mbox_j)\n\n justiceleague_ids = justiceleague.to_dict(ids_only=True)\n self.assertTrue('objectType' in str(justiceleague_ids), \"object type was not found in group json\")\n self.assertFalse('name' in str(justiceleague_ids), \"name was found in agent json\")\n self.assertEquals(justiceleague_ids['mbox'], mbox_j)\n\n badguy_ds = {\"objectType\":\"Agent\", \"mbox\":\"mailto:[email protected]\", \"name\":\"Darkseid\"}\n badguy_m = {\"objectType\":\"Agent\", \"mbox\":\"mailto:[email protected]\", \"name\":\"Mantis\"}\n\n ot_bg = \"Group\"\n members_bg = [badguy_ds, badguy_m]\n kwargs_bg = {\"objectType\":ot_bg,\"member\":members_bg}\n badguys, created = Agent.objects.retrieve_or_create(**kwargs_bg)\n self.assertTrue(created)\n badguys.save()\n self.assertEquals(badguys.objectType, ot_bg)\n bg_members = badguys.member.all()\n self.assertEquals(len(bg_members), 2)\n for bg in bg_members:\n self.assertTrue(bg.name in str(kwargs_bg['member']))\n\n badguys_exact = badguys.to_dict()\n self.assertEquals(badguys_exact['objectType'], ot_bg)\n for m in badguys_exact['member']:\n if m['name'] == badguy_ds['name']:\n self.assertEquals(m['objectType'], badguy_ds['objectType'])\n self.assertEquals(m['mbox'], badguy_ds['mbox'])\n elif m['name'] == badguy_m['name']:\n self.assertEquals(m['objectType'], badguy_m['objectType'])\n self.assertEquals(m['mbox'], badguy_m['mbox'])\n else:\n self.fail(\"got an unexpected name: \" % m['name'])\n\n badguys_ids = badguys.to_dict(ids_only=True)\n self.assertTrue('objectType' in str(badguys_ids), \"object type was not found in group json\")\n for m in badguys_ids['member']:\n self.assertFalse('objectType' in str(m), \"object type was found in member agent\")\n self.assertFalse('name' in str(m), \"name was found in member agent\")\n if m['mbox'] == badguy_ds['mbox']:\n self.assertEquals(m['mbox'], badguy_ds['mbox'])\n elif m['mbox'] == badguy_m['mbox']:\n self.assertEquals(m['mbox'], badguy_m['mbox'])\n else:\n self.fail(\"got an unexpected mbox: \" % m['mbox'])", "metadata": "root.AgentManagerTests.test_agent_format", "header": "['class', 'AgentManagerTests', '(', 'TestCase', ')', ':', '___EOS___']", "index": 253 } ]

[ { "span": "self.assertTrue(bg.name in str(kwargs_bg['member']))", "start_line": 381, "start_column": 12, "end_line": 381, "end_column": 64 } ]

[]

1

true

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Except block handles 'BaseException'

cloudera/hue/apps/beeswax/src/beeswax/server/hive_server2_lib.py

[ { "content": " @property\n def partition_keys(self):\n try:\n return [PartitionKeyCompatible(row['col_name'], row['data_type'], row['comment']) for row in self._get_partition_column()]\n except:\n LOG.exception('failed to get partition keys')\n return []", "metadata": "root.HiveServerTable.partition_keys", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 83 }, { "content": " @property\n def path_location(self):\n try:\n rows = self.describe\n rows = [row for row in rows if row['col_name'].startswith('Location:')]\n if rows:\n return rows[0]['data_type']\n except:\n LOG.exception('failed to get path location')\n return None", "metadata": "root.HiveServerTable.path_location", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 91 }, { "content": " @property\n def cols(self):\n rows = self.describe\n col_row_index = 2\n try:\n end_cols_index = map(itemgetter('col_name'), rows[col_row_index:]).index('')\n return rows[col_row_index:][:end_cols_index] + self._get_partition_column()\n except ValueError: # DESCRIBE on columns and nested columns does not contain add'l rows beyond cols\n return rows[col_row_index:]\n except:\n # Impala does not have it\n return rows", "metadata": "root.HiveServerTable.cols", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 102 }, { "content": " def _get_partition_column(self):\n rows = self.describe\n try:\n col_row_index = map(itemgetter('col_name'), rows).index('# Partition Information') + 3\n end_cols_index = map(itemgetter('col_name'), rows[col_row_index:]).index('')\n return rows[col_row_index:][:end_cols_index]\n except:\n # Impala does not have it\n return []", "metadata": "root.HiveServerTable._get_partition_column", "header": "['class', 'HiveServerTable', '(', 'Table', ')', ':', '___EOS___']", "index": 115 }, { "content": " def cols(self):\n try:\n return HiveServerTRowSet(self.columns, self.schema).cols(('col_name', 'data_type', 'comment'))\n except:\n # Impala API is different\n cols = HiveServerTRowSet(self.columns, self.schema).cols(('name', 'type', 'comment'))\n for col in cols:\n col['col_name'] = col.pop('name')\n col['data_type'] = col.pop('type')\n return cols", "metadata": "root.HiveServerTTableSchema.cols", "header": "['class', 'HiveServerTTableSchema', ':', '___EOS___']", "index": 326 }, { "content": " def get_log(self, operation_handle):\n try:\n req = TGetLogReq(operationHandle=operation_handle)\n res = self.call(self._client.GetLog, req)\n return res.log\n except:\n LOG.exception('server does not support GetLog')\n\n return 'Server does not support GetLog()'", "metadata": "root.HiveServerClient.get_log", "header": "['class', 'HiveServerClient', ':', '___EOS___']", "index": 850 } ]

[ { "span": "except:", "start_line": 87, "start_column": 4, "end_line": 87, "end_column": 11 }, { "span": "except:", "start_line": 98, "start_column": 4, "end_line": 98, "end_column": 11 }, { "span": "except:", "start_line": 111, "start_column": 4, "end_line": 111, "end_column": 11 }, { "span": "except:", "start_line": 121, "start_column": 4, "end_line": 121, "end_column": 11 }, { "span": "except:", "start_line": 329, "start_column": 4, "end_line": 329, "end_column": 11 }, { "span": "except:", "start_line": 855, "start_column": 4, "end_line": 855, "end_column": 11 } ]

[]

1

true

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Unused local variable

spaceboats/busbus/tests/test_util_rate_limit_requests.py

[ { "content": "def test_get_interval(url_prefix):\n session = RateLimitRequests(interval=0.2)\n resp1 = session.get(url_prefix + '/get')\n t = datetime.now()\n resp2 = session.get(url_prefix + '/ip')\n assert datetime.now() - t > timedelta(seconds=0.1)", "metadata": "root.test_get_interval", "header": "['module', '___EOS___']", "index": 37 } ]

[ { "span": "resp1 ", "start_line": 39, "start_column": 4, "end_line": 39, "end_column": 9 }, { "span": "resp2 ", "start_line": 41, "start_column": 4, "end_line": 41, "end_column": 9 } ]

[]

1

true

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Unused import

cloudera/hue/desktop/core/ext-py/openpyxl-2.3.0-b2/openpyxl/writer/styles.py

[ { "content": "from __future__ import absolute_import\n# Copyright (c) 2010-2015 openpyxl\n\n\"\"\"Write the shared style table.\"\"\"\n\n# package imports\n\nfrom openpyxl.compat import safe_string\nfrom openpyxl.utils.indexed_list import IndexedList\nfrom openpyxl.xml.functions import (\n Element,\n SubElement,\n ConditionalElement,\n tostring,\n )\nfrom openpyxl.xml.constants import SHEET_MAIN_NS\n\nfrom openpyxl.styles.colors import COLOR_INDEX\nfrom openpyxl.styles import DEFAULTS\nfrom openpyxl.styles.numbers import BUILTIN_FORMATS_REVERSE\nfrom openpyxl.styles.fills import GradientFill, PatternFill\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class StyleWriter(object):\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root.StyleWriter", "header": "['module', '___EOS___']", "index": 23 }, { "content": " def __init__(self, workbook):\n self.wb = workbook\n self._root = Element('styleSheet', {'xmlns': SHEET_MAIN_NS})", "metadata": "root.StyleWriter.__init__", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 25 }, { "content": " def write_table(self):\n self._write_number_formats()\n self._write_fonts()\n self._write_fills()\n self._write_borders()\n\n self._write_named_styles()\n self._write_cell_styles()\n self._write_style_names()\n self._write_differential_styles()\n self._write_table_styles()\n self._write_colors()\n\n return tostring(self._root)", "metadata": "root.StyleWriter.write_table", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 29 }, { "content": " def _write_number_formats(self):\n node = SubElement(self._root, 'numFmts', count= \"%d\" % len(self.wb._number_formats))\n for idx, nf in enumerate(self.wb._number_formats, 164):\n SubElement(node, 'numFmt', {'numFmtId':'%d' % idx,\n 'formatCode':'%s' % nf}\n )", "metadata": "root.StyleWriter._write_number_formats", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 45 }, { "content": " def _write_fonts(self):\n fonts_node = SubElement(self._root, 'fonts', count=\"%d\" % len(self.wb._fonts))\n for font in self.wb._fonts:\n fonts_node.append(font.to_tree())", "metadata": "root.StyleWriter._write_fonts", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 52 }, { "content": " def _write_fills(self):\n fills_node = SubElement(self._root, 'fills', count=\"%d\" % len(self.wb._fills))\n for fill in self.wb._fills:\n fills_node.append(fill.to_tree())", "metadata": "root.StyleWriter._write_fills", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 58 }, { "content": " def _write_borders(self):\n \"\"\"Write the child elements for an individual border section\"\"\"\n borders_node = SubElement(self._root, 'borders', count=\"%d\" % len(self.wb._borders))\n for border in self.wb._borders:\n borders_node.append(border.to_tree())", "metadata": "root.StyleWriter._write_borders", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 63 }, { "content": " def _write_named_styles(self):\n styles = self.wb._named_styles\n cell_style_xfs = SubElement(self._root, 'cellStyleXfs', count=\"%d\" % len(styles))\n\n for style in self.wb._named_styles.values():\n attrs = {}\n\n attrs['fontId'] = str(self.wb._fonts.add(style.font))\n attrs['borderId'] = str(self.wb._borders.add(style.border))\n attrs['fillId'] = str(self.wb._fills.add(style.fill))\n fmt = style.number_format\n if fmt in BUILTIN_FORMATS_REVERSE:\n fmt = BUILTIN_FORMATS_REVERSE[fmt]\n else:\n fmt = self.wb._number_formats.add(style.number_format) + 164\n attrs['numFmtId'] = str(fmt)\n\n SubElement(cell_style_xfs, 'xf', attrs)", "metadata": "root.StyleWriter._write_named_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 69 }, { "content": " def _write_cell_styles(self):\n \"\"\" write styles combinations based on ids found in tables \"\"\"\n # writing the cellXfs\n cell_xfs = SubElement(self._root, 'cellXfs',\n count='%d' % len(self.wb._cell_styles))\n\n for style in self.wb._cell_styles:\n\n node = style.to_tree()\n cell_xfs.append(node)\n\n if style.applyAlignment:\n al = self.wb._alignments[style.alignmentId]\n el = al.to_tree()\n node.append(el)\n\n if style.applyProtection:\n prot = self.wb._protections[style.protectionId]\n el = prot.to_tree()\n node.append(el)", "metadata": "root.StyleWriter._write_cell_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 88 }, { "content": " def _write_style_names(self):\n styles = self.wb._named_styles\n\n cell_styles = SubElement(self._root, 'cellStyles', count=str(len(styles)))\n\n for idx, style in enumerate(styles.values()):\n attrs = dict(style)\n attrs['xfId'] = str(idx)\n SubElement(cell_styles, 'cellStyle', attrs)", "metadata": "root.StyleWriter._write_style_names", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 110 }, { "content": " def _write_differential_styles(self):\n dxfs = SubElement(self._root, \"dxfs\", count=str(len(self.wb._differential_styles)))\n for fmt in self.wb._differential_styles:\n dxfs.append(fmt.to_tree())\n return dxfs", "metadata": "root.StyleWriter._write_differential_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 121 }, { "content": " def _write_table_styles(self):\n\n SubElement(self._root, 'tableStyles',\n {'count':'0', 'defaultTableStyle':'TableStyleMedium9',\n 'defaultPivotStyle':'PivotStyleLight16'})", "metadata": "root.StyleWriter._write_table_styles", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 128 }, { "content": " def _write_colors(self):\n \"\"\"\n Workbook contains a different colour index.\n \"\"\"\n\n if self.wb._colors == COLOR_INDEX:\n return\n\n cols = SubElement(self._root, \"colors\")\n rgb = SubElement(cols, \"indexedColors\")\n for color in self.wb._colors:\n SubElement(rgb, \"rgbColor\", rgb=color)", "metadata": "root.StyleWriter._write_colors", "header": "['class', 'StyleWriter', '(', 'object', ')', ':', '___EOS___']", "index": 134 } ]

[ { "span": "from openpyxl.compat import safe_string", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 39 }, { "span": "from openpyxl.utils.indexed_list import IndexedList", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 51 }, { "span": "from openpyxl.xml.functions import (\n Element,\n SubElement,\n ConditionalElement,\n tostring,\n )", "start_line": 9, "start_column": 0, "end_line": 14, "end_column": 5 }, { "span": "from openpyxl.styles import DEFAULTS", "start_line": 18, "start_column": 0, "end_line": 18, "end_column": 36 }, { "span": "from openpyxl.styles.fills import GradientFill, PatternFill", "start_line": 20, "start_column": 0, "end_line": 20, "end_column": 59 } ]

[]

1

false

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Unreachable code

testing-cabal/mock/mock/mock.py

[ { "content": "# mock.py\n# Test tools for mocking and patching.\n# E-mail: fuzzyman AT voidspace DOT org DOT uk\n#\n# mock 1.0.1\n# http://www.voidspace.org.uk/python/mock/\n#\n# Copyright (c) 2007-2013, Michael Foord & the mock team\n# All rights reserved.\n#\n# Redistribution and use in source and binary forms, with or without\n# modification, are permitted provided that the following conditions are\n# met:\n#\n# * Redistributions of source code must retain the above copyright\n# notice, this list of conditions and the following disclaimer.\n#\n# * Redistributions in binary form must reproduce the above\n# copyright notice, this list of conditions and the following\n# disclaimer in the documentation and/or other materials provided\n# with the distribution.\n#\n# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS\n# \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT\n# LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR\n# A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT\n# OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,\n# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT\n# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,\n# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY\n# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT\n# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE\n# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.\n\nfrom __future__ import absolute_import\n\n__all__ = (\n '__version__',\n 'version_info',\n 'Mock',\n 'MagicMock',\n 'patch',\n 'sentinel',\n 'DEFAULT',\n 'ANY',\n 'call',\n 'create_autospec',\n 'FILTER_DIR',\n 'CallableMixin',\n 'NonCallableMock',\n 'NonCallableMagicMock',\n 'mock_open',\n 'PropertyMock',\n)\n\n\nfrom functools import partial\nimport inspect\nimport pprint\nimport sys\ntry:\n import builtins\nexcept ImportError:\n import __builtin__ as builtins\nfrom types import ModuleType\n\nimport six\nfrom six import wraps\nfrom pbr.version import VersionInfo\n\n_v = VersionInfo('mock').semantic_version()\n__version__ = _v.release_string()\nversion_info = _v.version_tuple()\n\nimport mock\n\ntry:\n inspectsignature = inspect.signature\nexcept AttributeError:\n import funcsigs\n inspectsignature = funcsigs.signature\n\n\n# TODO: use six.\ntry:\n unicode\nexcept NameError:\n # Python 3\n basestring = unicode = str\n\ntry:\n long\nexcept NameError:\n # Python 3\n long = int\n\ntry:\n BaseException\nexcept NameError:\n # Python 2.4 compatibility\n BaseException = Exception\n\nif six.PY2:\n # Python 2's next() can't handle a non-iterator with a __next__ method.\n _next = next\n\n del _next\n\n\n_builtins = set(name for name in dir(builtins) if not name.startswith('_'))\n\nBaseExceptions = (BaseException,)\nif 'java' in sys.platform:\n # jython\n import java\n BaseExceptions = (BaseException, java.lang.Throwable)\n\ntry:\n _isidentifier = str.isidentifier\nexcept AttributeError:\n # Python 2.X\n import keyword\n import re\n regex = re.compile(r'^[a-z_][a-z0-9_]*$', re.I)\n\nself = 'im_self'\nbuiltin = '__builtin__'\nif six.PY3:\n self = '__self__'\n builtin = 'builtins'\n\n# NOTE: This FILTER_DIR is not used. The binding in mock.FILTER_DIR is.\nFILTER_DIR = True\n\n# Workaround for Python issue #12370\n# Without this, the __class__ properties wouldn't be set correctly\n_safe_super = super\n\n\n\n\n\n\n\nDescriptorTypes = (\n type(_slotted.a),\n property,\n)\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nsentinel = _Sentinel()\n\nDEFAULT = sentinel.DEFAULT\n_missing = sentinel.MISSING\n_deleted = sentinel.DELETED\n\n\nClassType = type(OldStyleClass)\n\n\n\n\nClassTypes = (type,)\nif six.PY2:\n ClassTypes = (type, ClassType)\n\n_allowed_names = set((\n 'return_value', '_mock_return_value', 'side_effect',\n '_mock_side_effect', '_mock_parent', '_mock_new_parent',\n '_mock_name', '_mock_new_name'\n))\n\n\n\n\n\n\n\n\n# Internal class to identify if we wrapped an iterator object or not.\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\npatch.object = _patch_object\npatch.dict = _patch_dict\npatch.multiple = _patch_multiple\npatch.stopall = _patch_stopall\npatch.TEST_PREFIX = 'test'\n\nmagic_methods = (\n \"lt le gt ge eq ne \"\n \"getitem setitem delitem \"\n \"len contains iter \"\n \"hash str sizeof \"\n \"enter exit \"\n # we added divmod and rdivmod here instead of numerics\n # because there is no idivmod\n \"divmod rdivmod neg pos abs invert \"\n \"complex int float index \"\n \"trunc floor ceil \"\n)\n\nnumerics = (\n \"add sub mul matmul div floordiv mod lshift rshift and xor or pow\"\n)\nif six.PY3:\n numerics += ' truediv'\ninplace = ' '.join('i%s' % n for n in numerics.split())\nright = ' '.join('r%s' % n for n in numerics.split())\nextra = ''\nif six.PY3:\n extra = 'bool next '\nelse:\n extra = 'unicode long nonzero oct hex truediv rtruediv '\n\n# not including __prepare__, __instancecheck__, __subclasscheck__\n# (as they are metaclass methods)\n# __del__ is not supported at all as it causes problems if it exists\n\n_non_defaults = set((\n '__cmp__', '__getslice__', '__setslice__', '__coerce__', # <3.x\n '__get__', '__set__', '__delete__', '__reversed__', '__missing__',\n '__reduce__', '__reduce_ex__', '__getinitargs__', '__getnewargs__',\n '__getstate__', '__setstate__', '__getformat__', '__setformat__',\n '__repr__', '__dir__', '__subclasses__', '__format__',\n))\n\n\n\n\n_magics = set(\n '__%s__' % method for method in\n ' '.join([magic_methods, numerics, inplace, right, extra]).split()\n)\n\n_all_magics = _magics | _non_defaults\n\n_unsupported_magics = set((\n '__getattr__', '__setattr__',\n '__init__', '__new__', '__prepare__'\n '__instancecheck__', '__subclasscheck__',\n '__del__'\n))\n\n_calculate_return_value = {\n '__hash__': lambda self: object.__hash__(self),\n '__str__': lambda self: object.__str__(self),\n '__sizeof__': lambda self: object.__sizeof__(self),\n '__unicode__': lambda self: unicode(object.__str__(self)),\n}\n\n_return_values = {\n '__lt__': NotImplemented,\n '__gt__': NotImplemented,\n '__le__': NotImplemented,\n '__ge__': NotImplemented,\n '__int__': 1,\n '__contains__': False,\n '__len__': 0,\n '__exit__': False,\n '__complex__': 1j,\n '__float__': 1.0,\n '__bool__': True,\n '__nonzero__': True,\n '__oct__': '1',\n '__hex__': '0x1',\n '__long__': long(1),\n '__index__': 1,\n}\n\n\n\n\n\n_side_effect_methods = {\n '__eq__': _get_eq,\n '__ne__': _get_ne,\n '__iter__': _get_iter,\n}\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nANY = _ANY()\n\n\n\n\n\n\n\n\ncall = _Call(from_kall=False)\n\n\n\n\n\n\n\n\n\n\n\nFunctionTypes = (\n # python function\n type(create_autospec),\n # instance method\n type(ANY.__eq__),\n)\n\nMethodWrapperTypes = (\n type(ANY.__eq__.__get__),\n)\n\n\nfile_spec = None\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "except NameError:", "start_line": 98, "start_column": 0, "end_line": 98, "end_column": 17 } ]

[]

1

true

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Unused import

ZoomerAnalytics/xlwings/xlwings/__init__.py

[ { "content": "from __future__ import absolute_import\nimport sys\n\n__version__ = '0.7.1'\n\n# Python 2 vs 3\nPY3 = sys.version_info[0] == 3\n\nif PY3:\n string_types = str\n xrange = range\n from builtins import map\n import builtins\nelse:\n string_types = basestring\n xrange = xrange\n from future_builtins import map\n builtins = __builtins__\n\n# Platform specifics\nif sys.platform.startswith('win'):\n from . import _xlwindows as xlplatform\nelse:\n from . import _xlmac as xlplatform\n\ntime_types = xlplatform.time_types\n\n# Errors\n\n# API\nfrom .main import Application, Workbook, Range, Chart, Sheet, Picture, Shape, Plot, view\nfrom .constants import *\n\n# UDFs\nif sys.platform.startswith('win'):\n from .udfs import xlfunc as func, xlsub as sub, xlret as ret, xlarg as arg, get_udf_module, import_udfs\n\n\n\n\n\n\n\n\n\n\n# Server\nif sys.platform.startswith('win'):\n from .server import serve", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class ShapeAlreadyExists(Exception):\n pass", "metadata": "root.ShapeAlreadyExists", "header": "['module', '___EOS___']", "index": 28 }, { "content": "def xlfunc(*args, **kwargs):\n raise Exception(\"Deprecation: 'xlfunc' has been renamed to 'func' - use 'import xlwings as xw' and decorate your function with '@xw.func'.\")", "metadata": "root.xlfunc", "header": "['module', '___EOS___']", "index": 40 }, { "content": "def xlsub(*args, **kwargs):\n raise Exception(\"Deprecation: 'xlsub' has been renamed to 'sub' - use 'import xlwings as xw' and decorate your function with '@xw.sub'.\")", "metadata": "root.xlsub", "header": "['module', '___EOS___']", "index": 44 }, { "content": "def xlret(*args, **kwargs):\n raise Exception(\"Deprecation: 'xlret' has been renamed to 'ret' - use 'import xlwings as xw' and decorate your function with '@xw.ret'.\")", "metadata": "root.xlret", "header": "['module', '___EOS___']", "index": 48 }, { "content": "def xlarg(*args, **kwargs):\n raise Exception(\"Deprecation: 'xlarg' has been renamed to 'arg' - use 'import xlwings as xw' and decorate your function with '@xw.arg'.\")", "metadata": "root.xlarg", "header": "['module', '___EOS___']", "index": 52 } ]

[ { "span": "from builtins import map", "start_line": 11, "start_column": 4, "end_line": 11, "end_column": 28 }, { "span": "import builtins", "start_line": 12, "start_column": 4, "end_line": 12, "end_column": 19 } ]

[]

1

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Modification of parameter with default

openelections/openelections-core/openelex/lib/__init__.py

[ { "content": "def standardized_filename(state, start_date, extension,\n party=None, special=False, race_type=None, reporting_level=None,\n jurisdiction=None, office=None, office_district=None,\n prefix_bits=[], suffix_bits=[], sep=\"__\"):\n \"\"\"\n Standardize an election-related filename.\n\n For more on filename standardization conventions, see\n http://docs.openelections.net/archive-standardization/.\n\n Args:\n state (string): State abbreviation, for example \"md\".\n start_date (string): String representing the election's start date\n in YYYY-MM-DD format.\n extension (string): Filename extension, including the leading '.'. For\n example, \".csv\".\n party (string, optional): Slug representing the political party of\n information in the file.\n special (boolean, optional): Whether the file contains data related to a\n special election. Default is False.\n race_type (string, optional): Slug representing the type of election\n contest. For example, \"general\", \"primary\", etc.\n reporting_level (string, optional): Slug representing the reporting level of\n the data file. This could be something like 'county' or\n 'precinct'.\n jurisdiction (string, optional): The jurisdiction of the data\n covered in the file.\n office (string, optional): Office if results are for a single office.\n office_district (string, optional): Office district number if\n the data in the file are for a single office.\n prefix_bits (list, optional): List of strings that will be prepended to\n the generated filename and separated by the value of ``sep``.\n suffix_bits (list, optional): List of strings that will be appended\n to the generated filename and separated by the value of ``sep``.\n sep (string, optional): Separator between filename elements. Default\n is \"__\".\n\n Returns:\n A string representing the standardized filename for\n election-related data.\n\n \"\"\"\n # Store filename components in a list that we'll eventually join together\n bits = []\n\n # Filename starts with the prefix bits, if any\n bits.extend(prefix_bits)\n\n # All filenames need a date and a state\n bits.extend([\n start_date.replace('-', ''),\n state.lower(),\n ])\n\n if special:\n bits.append('special')\n\n if party:\n bits.append(slugify(party))\n\n if race_type:\n bits.append(race_type.replace('-', '_'))\n\n if jurisdiction:\n bits.append(slugify(jurisdiction))\n\n if office:\n bits.append(slugify(office))\n\n if office_district:\n bits.append(slugify(office_district))\n\n if reporting_level:\n bits.append(reporting_level)\n\n bits.extend(suffix_bits)\n\n return sep.join(bits) + extension", "metadata": "root.standardized_filename", "header": "['module', '___EOS___']", "index": 33 } ]

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[ { "span": "prefix_bits=", "start_line": 36, "start_column": 4, "end_line": 36, "end_column": 15 } ]

1

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Unused import

neurodata/ndstore/test/test_ramon.py

[ { "content": "# Copyright 2014 Open Connectome Project (http://openconnecto.me)\n# \n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n# \n# http://www.apache.org/licenses/LICENSE-2.0\n# \n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\nimport urllib2\nimport re\nimport tempfile\nimport h5py\nimport random \nimport csv\nimport numpy as np\nimport pytest\nimport httplib\nfrom contextlib import closing\n\nfrom params import Params\nfrom postmethods import putAnnotation, getAnnotation\nfrom ramon import H5AnnotationFile, getH5id, makeAnno, getId, getField, setField\nimport kvengine_to_test\nimport site_to_test\nimport makeunitdb\nSITE_HOST = site_to_test.site\n\n\np = Params()\np.token = 'unittest'\np.resolution = 0\np.channels = ['unit_anno']\n\n\n# RBTODO add tests key/value and compound fields.\n # assign a field for a wrong annotation type\n# url = \"http://%s/ca/%s/%s/setField/segmentclass/2/\" % ( SITE_HOST, 'unittest',str(annid))\n# with pytest.raises(urllib2.HTTPError): \n# req = urllib2.Request ( url )\n# f = urllib2.urlopen ( url )\n\n# def test_kvpairs(self):\n#\n# \"\"\"Test 1: Create a minimal HDF5 file\"\"\"\n# # Create an in-memory HDF5 file\n# tmpfile = tempfile.NamedTemporaryFile()\n# h5fh = h5py.File ( tmpfile.name )\n#\n# # Create the top level annotation id namespace\n# idgrp = h5fh.create_group ( str(0) )\n#\n# # Create a metadata group\n# mdgrp = idgrp.create_group ( \"METADATA\" )\n#\n# kvpairs={}\n#\n# # Turn our dictionary into a csv file\n# fstring = cStringIO.StringIO()\n# csvw = csv.writer(fstring, delimiter=',')\n# csvw.writerows([r for r in kvpairs.iteritems()])\n#\n# # User-defined metadata\n# mdgrp.create_dataset ( \"KVPAIRS\", (1,), dtype=h5py.special_dtype(vlen=str), data=fstring.getvalue())\n#\n# # Now put an empty file\n# # Build the put URL\n# url = \"http://%s/ca/%s/\" % ( SITE_HOST, 'unittest')\n#\n# # write an object (server creates identifier)\n# req = urllib2.Request ( url, tmpfile.read())\n# response = urllib2.urlopen(req)\n# putid = int(response.read())\n#\n# # now read and verify\n# # retrieve the annotation\n# url = \"http://%s/ca/%s/%s/\" % ( SITE_HOST, 'unittest', str(putid))\n# f = urllib2.urlopen ( url )\n# retfile = tempfile.NamedTemporaryFile ( )\n# retfile.write ( f.read() )\n# retfile.seek(0)\n# h5ret = h5py.File ( tmpfile.name, driver='core', backing_store=False )\n#\n# mdgrpret = idgrpret['METADATA']\n# idgrpret = h5ret.get(str(putid1))\n#\n# assert ( mdgrpret['KVPAIRS'][:] == '' )\n#\n# for i in range(10):\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Test_Ramon:\n\n\n\n\n\n\n\n\n\n\n\n\n\n \n\n\n\n\n\n\n\n\n\n", "metadata": "root.Test_Ramon", "header": "['module', '___EOS___']", "index": 39 }, { "content": " def setup_class(self):\n \"\"\"Create the unittest database\"\"\"\n makeunitdb.createTestDB(p.token, readonly=0)", "metadata": "root.Test_Ramon.setup_class", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 42 }, { "content": " def teardown_class (self):\n \"\"\"Destroy the unittest database\"\"\"\n makeunitdb.deleteTestDB(p.token)", "metadata": "root.Test_Ramon.teardown_class", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 46 }, { "content": " def test_anno_minmal(self):\n \"\"\"Upload a minimal and maximal annotation. Verify fields.\"\"\"\n \n # Create an in-memory HDF5 file\n tmpfile = tempfile.NamedTemporaryFile()\n h5fh = h5py.File ( tmpfile.name )\n # Create the top level annotation id namespace\n idgrp = h5fh.create_group ( str(0) )\n h5fh.flush()\n tmpfile.seek(0)\n \n p.annoid = putAnnotation(p, tmpfile)\n h5ret = getAnnotation(p)\n\n idgrpret = h5ret.get(str(p.annoid))\n assert idgrpret\n assert ( idgrpret['ANNOTATION_TYPE'][0] == 1 )\n assert not idgrpret.get('RESOLUTION')\n assert not idgrpret.get('XYZOFFSET')\n assert not idgrpret.get('VOXELS')\n assert not idgrpret.get('CUTOUT')\n mdgrpret = idgrpret['METADATA']\n assert mdgrpret\n assert ( mdgrpret['CONFIDENCE'][0] == 0.0 )\n assert ( mdgrpret['STATUS'][0] == 0 )\n assert ( mdgrpret['KVPAIRS'][:] == '' )\n assert ( mdgrpret['AUTHOR'][:] == 'unknown' )", "metadata": "root.Test_Ramon.test_anno_minmal", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 51 }, { "content": " def test_anno_full (self):\n \"\"\"Upload a fully populated HDF5 file\"\"\"\n \n # Create an in-memory HDF5 file\n tmpfile = tempfile.NamedTemporaryFile()\n h5fh = h5py.File ( tmpfile.name )\n # Create the top level annotation id namespace\n idgrp = h5fh.create_group ( str(0) )\n \n # Create a metadata group\n mdgrp = idgrp.create_group ( \"METADATA\" )\n\n # now lets add a bunch of random values for the specific annotation type\n ann_status = random.randint(0,4)\n ann_confidence = random.random()\n ann_author = 'unittest_author'\n\n # Annotation type\n idgrp.create_dataset ( \"ANNOTATION_TYPE\", (1,), np.uint32, data=1 )\n\n # Set Annotation specific metadata\n mdgrp.create_dataset ( \"STATUS\", (1,), np.uint32, data=ann_status )\n mdgrp.create_dataset ( \"CONFIDENCE\", (1,), np.float, data=ann_confidence )\n mdgrp.create_dataset ( \"AUTHOR\", (1,), dtype=h5py.special_dtype(vlen=str), data=ann_author )\n\n h5fh.flush()\n tmpfile.seek(0)\n\n p.annoid = putAnnotation(p, tmpfile)\n h5ret = getAnnotation(p)\n\n idgrpret = h5ret.get(str(p.annoid))\n assert idgrpret\n assert ( idgrpret['ANNOTATION_TYPE'][0] == 1 )\n assert not idgrpret.get('RESOLUTION')\n assert not idgrpret.get('XYZOFFSET')\n assert not idgrpret.get('VOXELS')\n assert not idgrpret.get('CUTOUT')\n mdgrpret = idgrpret['METADATA']\n assert mdgrpret\n assert ( abs(mdgrpret['CONFIDENCE'][0] - ann_confidence) < 0.0001 )\n assert ( mdgrpret['STATUS'][0] == ann_status )\n assert ( mdgrpret['AUTHOR'][:] == ann_author )\n\n tmpfile.close()", "metadata": "root.Test_Ramon.test_anno_full", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 80 }, { "content": " def test_anno_update (self):\n \"\"\"Upload a Updated file with new data\"\"\"\n\n tmpfile = tempfile.NamedTemporaryFile()\n h5fh = h5py.File ( tmpfile.name )\n\n # Create the top level annotation id namespace\n idgrp = h5fh.create_group ( str(p.annoid) )\n\n # Create a metadata group\n mdgrp = idgrp.create_group ( \"METADATA\" )\n\n # now lets add a bunch of random values for the specific annotation type\n ann_status = random.randint(0,4)\n ann_confidence = random.random()\n ann_author = 'unittest_author2'\n\n # Annotation type\n idgrp.create_dataset ( \"ANNOTATION_TYPE\", (1,), np.uint32, data=1 )\n\n # Set Annotation specific metadata\n mdgrp.create_dataset ( \"STATUS\", (1,), np.uint32, data=ann_status )\n mdgrp.create_dataset ( \"CONFIDENCE\", (1,), np.float, data=ann_confidence )\n mdgrp.create_dataset ( \"AUTHOR\", (1,), dtype=h5py.special_dtype(vlen=str), data=ann_author )\n\n h5fh.flush()\n tmpfile.seek(0)\n\n p.field = 'update'\n p.annoid = putAnnotation(p, tmpfile)\n p.field = None\n h5ret = getAnnotation(p)\n\n idgrpret = h5ret.get(str(p.annoid))\n assert idgrpret\n assert ( idgrpret['ANNOTATION_TYPE'][0] == 1 )\n assert not idgrpret.get('RESOLUTION')\n assert not idgrpret.get('XYZOFFSET')\n assert not idgrpret.get('VOXELS')\n assert not idgrpret.get('CUTOUT')\n mdgrpret = idgrpret['METADATA']\n assert mdgrpret\n assert ( abs(mdgrpret['CONFIDENCE'][0] - ann_confidence) < 0.0001 )\n #assert ( mdgrpret['CONFIDENCE'][0] == ann_confidence )\n assert ( mdgrpret['STATUS'][0] == ann_status )\n assert ( mdgrpret['AUTHOR'][:] == ann_author )", "metadata": "root.Test_Ramon.test_anno_update", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 127 }, { "content": " def test_anno_delete (self):\n \"\"\"Delete the object\"\"\"\n \n # Build the delete URL\n try:\n (base,suffix) = SITE_HOST.split(\"/\",1)\n except:\n base = SITE_HOST\n suffix = None\n\n conn = httplib.HTTPConnection ( base )\n\n if suffix:\n conn.request ('DELETE', '/{}/ca/{}/{}/{}/'.format(suffix, 'unittest', 'unit_anno', p.annoid)) \n else:\n conn.request ('DELETE', '/ca/{}/{}/{}/'.format('unittest', 'unit_anno', p.annoid))\n\n resp = conn.getresponse()\n content=resp.read()\n\n assert content == 'Success'\n\n # retrieve the annotation\n # verify that it's not there.\n url = \"http://{}/ca/{}/{}/{}/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n urllib2.urlopen ( url )", "metadata": "root.Test_Ramon.test_anno_delete", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 175 }, { "content": " def test_anno_upload( self ):\n \"\"\"Upload all different kinds of annotations and retrieve\"\"\"\n\n for anntype in [ 1, 2, 3, 4, 5, 6]:\n \n annoid = 0\n f = H5AnnotationFile ( anntype, annoid )\n\n putid1 = putAnnotation(p, f)\n\n # this assumes that +1 is available (which it is)\n newid = putid1 + 1\n f = H5AnnotationFile ( anntype, newid )\n\n putid2 = putAnnotation(p, f)\n\n # retrieve both annotations\n p.annoid = putid1\n assert ( putid1 == getId(p) )\n p.annoid = putid2\n assert ( putid2 == getId(p) )", "metadata": "root.Test_Ramon.test_anno_upload", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 204 }, { "content": " def test_annotation_field (self):\n \"\"\"Upload an annotation and test it's fields\"\"\"\n\n # Make an annotation \n makeAnno (p, 1)\n \n # Test Status\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test confidence\n confidence = random.random ()\n f = setField(p, 'confidence', confidence)\n f = getField(p, 'confidence')\n assert confidence - float(f.read()) < 0.001\n \n # Test author\n #f = self.getField(p, 'author')\n #assert 'Unit Test' == f.read()", "metadata": "root.Test_Ramon.test_annotation_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 227 }, { "content": " def test_synapse_field (self):\n \"\"\"Upload a synapse and test it's fields\"\"\"\n\n # Make a synapse\n makeAnno (p, 2)\n\n # Test synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test the inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_synapse_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 250 }, { "content": " def test_seed_field (self):\n \"\"\"Upload a seed and test it's fields\"\"\"\n\n # Make a seed\n makeAnno (p, 3)\n\n # Test the parent\n parent = random.randint (0,100)\n f = setField(p, 'parent', parent)\n f = getField(p, 'parent')\n assert parent == int(f.read()) \n\n # Test the source\n source = random.randint (0,100)\n f = setField(p, 'source', source)\n f = getField(p, 'source')\n assert source == int(f.read()) \n\n # Test the cubelocation\n cubelocation = random.randint (0,100)\n f = setField(p, 'cubelocation', cubelocation)\n f = getField(p, 'cubelocation')\n assert cubelocation == int(f.read()) \n \n # Test the position\n position = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'position', ','.join([str(i) for i in position]))\n f = getField(p, 'position')\n assert ','.join([str(i) for i in position]) == f.read()", "metadata": "root.Test_Ramon.test_seed_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 280 }, { "content": " def test_segment_field (self):\n \"\"\"Upload a segment and test it's fields\"\"\"\n\n # Make a segment\n makeAnno (p, 4)\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the segmentclass\n segmentclass = random.randint (0,100)\n f = setField(p, 'segmentclass', segmentclass)\n f = getField(p, 'segmentclass')\n assert segmentclass == int(f.read()) \n\n # Test the neuron\n neuron = random.randint (0,100)\n f = setField(p, 'neuron', neuron)\n f = getField(p, 'neuron')\n assert neuron == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n \n # Test the synapses\n synapses = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'synapses', ','.join([str(i) for i in synapses]))\n f = getField(p, 'synapses')\n assert ','.join([str(i) for i in synapses]) == f.read()", "metadata": "root.Test_Ramon.test_segment_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 311 }, { "content": " def test_neuron_field (self):\n \"\"\"Upload a neuron and test it's fields\"\"\"\n\n # Make a neuron\n makeAnno (p, 5)\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test segments\n status = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'segments', \",\".join([str(i) for i in status]))\n f = getField(p, 'segments')\n assert \",\".join([str(i) for i in status]) == f.read()", "metadata": "root.Test_Ramon.test_neuron_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 348 }, { "content": " def test_organelle_field (self):\n \"\"\"Upload an organelle and test it's fields\"\"\"\n\n # Make an organelle \n makeAnno ( p, 6 )\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the organelleclass\n organelleclass = random.randint (0,100)\n f = setField(p, 'organelleclass', organelleclass)\n f = getField(p, 'organelleclass')\n assert organelleclass == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_organelle_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 366 }, { "content": " def test_wrong_field ( self ):\n \n # Make an annotation \n makeAnno (p, 2)\n\n # Test the synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read())\n \n # bad format to a number\n url = \"http://{}/ca/{}/{}/{}/setField/status/aa/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )\n \n # request a missing field\n url = \"http://{}/ca/{}/{}/{}/getField/othernonesuch/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )", "metadata": "root.Test_Ramon.test_wrong_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 396 } ]

[ { "span": "import re", "start_line": 15, "start_column": 0, "end_line": 15, "end_column": 9 }, { "span": "import csv", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 10 }, { "span": "from contextlib import closing", "start_line": 23, "start_column": 0, "end_line": 23, "end_column": 30 }, { "span": "from ramon import H5AnnotationFile, getH5id, makeAnno, getId, getField, setField", "start_line": 27, "start_column": 0, "end_line": 27, "end_column": 80 }, { "span": "import kvengine_to_test", "start_line": 28, "start_column": 0, "end_line": 28, "end_column": 23 } ]

[]

1

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Unused import

pandemicsyn/stalker/stalkerweb/stalkerweb/views.py

[ { "content": "import json\nimport eventlet\neventlet.monkey_patch()\nfrom eventlet.green import urllib2\nfrom flask import request, abort, render_template, session, redirect\nfrom bson import ObjectId\nfrom time import time\nfrom random import randint\nfrom stalkerweb.auth import is_valid_login, login_required, remove_user\nfrom stalkerweb.stutils import jsonify, genPrimaryKey64\nfrom stalkerweb import app, rc, rdb\nfrom flask.ext.wtf import Form\nfrom wtforms import TextField, PasswordField, BooleanField\nfrom wtforms.validators import Required\nfrom werkzeug.contrib.cache import RedisCache\nimport rethinkdb as r\nfrom rethinkdb.errors import RqlDriverError, RqlRuntimeError\nimport logging\n\nVALID_STATES = ['alerting', 'pending', 'in_maintenance', 'suspended']\n\ncache = RedisCache(host=app.config['REDIS_HOST'], port=app.config['REDIS_PORT'], default_timeout=app.config['CACHE_TTL'])\n\nlogger = logging.getLogger(app.config['LOG_NAME'])\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n \n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\nif __name__ == '__main__':\n debug = True\n app.run(host='0.0.0.0', debug=debug)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class SignInForm(Form):\n username = TextField(validators=[Required()])\n password = PasswordField(validators=[Required()])\n remember_me = BooleanField()", "metadata": "root.SignInForm", "header": "['module', '___EOS___']", "index": 26 }, { "content": "def _get_local_metrics():\n metrics = {}\n mkeys = ['checks', 'failing', 'flapping', 'pending', 'qsize',\n 'suspended']\n try:\n values = rc.mget(mkeys)\n for k in mkeys:\n metrics[k] = int(values[mkeys.index(k)])\n return metrics\n except Exception as err:\n logger.exception('Error gathering metrics')\n return None", "metadata": "root._get_local_metrics", "header": "['module', '___EOS___']", "index": 32 }, { "content": "def _get_remote_checks(clusterid, state):\n endpoints = {'alerting': '/checks/state/alerting',\n 'pending': '/checks/state/pending',\n 'suspended': '/checks/state/suspended',\n 'in_maintenance': '/checks/state/in_maintenance'}\n target = app.config['GLOBAL_CLUSTERS'][clusterid]['host'] + \\\n endpoints[state]\n headers = {'X-API-KEY': app.config['GLOBAL_CLUSTERS'][clusterid]['key']}\n try:\n req = urllib2.Request(target, headers=headers)\n res = urllib2.urlopen(req, timeout=app.config['REMOTE_TIMEOUT'])\n return json.loads(res.read())\n except Exception as err:\n logger.exception(\"Error grabbing checks for %s: %s\" % (clusterid, err))\n return None", "metadata": "root._get_remote_checks", "header": "['module', '___EOS___']", "index": 46 }, { "content": "def _get_remote_stats(clusterid):\n target = app.config['GLOBAL_CLUSTERS'][clusterid]['host'] + '/stats'\n headers = {'X-API-KEY': app.config['GLOBAL_CLUSTERS'][clusterid]['key']}\n try:\n req = urllib2.Request(target, headers=headers)\n res = urllib2.urlopen(req, timeout=app.config['REMOTE_TIMEOUT'])\n return json.loads(res.read())[clusterid]\n except Exception as err:\n logger.exception(\"Error grabbing stats for %s: %s\" % (clusterid, err))\n return None", "metadata": "root._get_remote_stats", "header": "['module', '___EOS___']", "index": 63 }, { "content": "def _get_users_theme(username):\n q = list(r.table(\"users\").filter({\"username\": username}).pluck({\"theme\": True}).run(rdb.conn))[0]\n return q.get('theme', 'cerulean')", "metadata": "root._get_users_theme", "header": "['module', '___EOS___']", "index": 75 }, { "content": "def _rand_start():\n \"\"\"Used to randomize the first check (and hopefully stagger\n checks on a single host)\"\"\"\n return time() + randint(1, 600)", "metadata": "root._rand_start", "header": "['module', '___EOS___']", "index": 80 }, { "content": "def _valid_registration(content):\n fields = [('hostname', basestring), ('checks', dict), ('roles', list)]\n for field in fields:\n if field[0] in content:\n if not isinstance(content[field[0]], field[1]):\n return False\n else:\n return False\n # validate checks each should have a interval and args field\n for check in content['checks']:\n if not isinstance(content['checks'][check], dict):\n return False\n if 'interval' not in content['checks'][check]:\n return False\n if not isinstance(content['checks'][check]['interval'], int):\n return False\n if not isinstance(content['checks'][check]['follow_up'], int):\n return False\n if 'args' not in content['checks'][check]:\n return False\n if 'priority' in content['checks'][check]:\n if not isinstance(content['checks'][check]['priority'], int):\n return False\n if not isinstance(content['checks'][check]['args'], basestring):\n return False\n # everything checked out\n return True", "metadata": "root._valid_registration", "header": "['module', '___EOS___']", "index": 86 }, { "content": "@app.route(\"/register\", methods=['POST', 'PUT'])\ndef register():\n if request.headers.get('X-REGISTER-KEY') != app.config['REGISTER_KEY']:\n abort(412)\n if not request.json:\n abort(400)\n if not _valid_registration(request.json):\n abort(400)\n hid = request.json['hostname']\n checks = request.json['checks']\n roles = request.json['roles']\n ip_addr = request.json.get('ip', request.remote_addr)\n if ip_addr == '':\n ip_addr = request.remote_addr\n try:\n pkey = genPrimaryKey64(\"%s%s\" % (hid, ip_addr))\n q = r.table(\"hosts\").insert({\n \"id\": pkey,\n \"hostname\": hid,\n \"ip\": ip_addr,\n \"checks\": checks,\n \"roles\": roles\n },conflict=\"update\").run(rdb.conn)\n q = r.table(\"checks\").filter({\"hostname\": hid}).delete().run(rdb.conn) #we're about to reinstart all so just delete all incase checks got removed\n bulk_load = []\n for i in checks:\n bulk_load.append({'id': genPrimaryKey64(\"%s%s%s\" % (hid, ip_addr, i)),\n 'hostname': hid, 'ip': ip_addr,\n 'check': i, 'last': 0, 'next': _rand_start(),\n 'interval': checks[i]['interval'],\n 'follow_up': checks[i]['follow_up'],\n 'pending': False,\n 'status': None, 'in_maintenance': False,\n 'suspended': False, 'out': '',\n 'priority': checks[i].get('priority', 1)})\n q = r.table(\"checks\").insert(bulk_load, conflict=\"update\").run(rdb.conn)\n except Exception as err:\n logger.error(err)\n return jsonify({'status': 'fail', 'error': str(err)}), 400\n return jsonify({'status': 'ok'})", "metadata": "root.register", "header": "['module', '___EOS___']", "index": 115 }, { "content": "@app.route(\"/user/\", defaults={'username': None})\[email protected](\"/user/<username>\", methods=['GET', 'POST', 'DELETE'])\n@login_required\ndef users(username):\n if not username:\n if request.method == 'DELETE':\n abort(400) # don't allow deletes with out user\n if session.get('username', False):\n username = session.get('username')\n else:\n abort(400)\n if request.method == 'GET':\n q = list(r.table(\"users\").filter({\"username\": username}).without(\"hash\").run(rdb.conn))[0]\n if q:\n if 'theme' not in q:\n q['theme'] = 'cerulean'\n return jsonify(q)\n else:\n abort(404)\n elif request.method == 'DELETE':\n return jsonify({'success': remove_user(username)})\n elif request.method == 'POST':\n fields = {}\n if not request.json:\n abort(400)\n if 'theme' in request.json:\n if request.json['theme'] in app.config['THEMES']:\n fields['theme'] = request.json['theme']\n else:\n abort(400)\n if 'email' in request.json:\n fields['email'] = request.json['email']\n q = r.table(\"users\").filter({\"username\": username}).update(fields).run(rdb.conn) \n if q[\"replaced\"] != 0 :\n if session and 'theme' in fields:\n session['theme'] = fields['theme']\n return jsonify({'success': True})\n else:\n return jsonify({'success': False})", "metadata": "root.users", "header": "['module', '___EOS___']", "index": 157 }, { "content": "@app.route(\"/hosts/\", defaults={'host': None})\[email protected](\"/hosts/<host>\", methods=['GET', 'DELETE'])\n@login_required\ndef hosts(host):\n \"\"\"Delete a given host and all its checks\"\"\"\n if not host:\n q = list(r.table(\"hosts\").without(\"id\").run(rdb.conn))\n if q:\n q = {'hosts': q}\n else:\n if request.method == 'DELETE':\n q = r.table(\"checks\").filter((r.row[\"hostname\"] == host) | (r.row[\"ip\"] == host)).delete().run(rdb.conn)\n q = r.table(\"hosts\").filter((r.row[\"hostname\"] == host) | (r.row[\"ip\"] == host)).delete().run(rdb.conn)\n return jsonify({'success': True})\n else:\n q = list(r.table(\"hosts\").filter((r.row[\"hostname\"] == host) | (r.row[\"ip\"] == host)).without(\"id\").run(rdb.conn))\n if q:\n return jsonify(q[0])\n else:\n abort(404)", "metadata": "root.hosts", "header": "['module', '___EOS___']", "index": 198 }, { "content": "@app.route(\"/checks/\", defaults={'host': None})\[email protected](\"/checks/host/<host>\")\n@login_required\ndef checks(host):\n \"\"\"Get all checks for a given hostname or ip\"\"\"\n if not host:\n q = list(r.table(\"checks\").run(rdb.conn))\n else:\n q = list(r.table(\"checks\").filter((r.row[\"hostname\"] == host) | (r.row[\"ip\"] == host)).run(rdb.conn))\n if q:\n for check in q:\n check['id'] = str(check['id'])\n return jsonify({'checks': q})\n else:\n abort(404)", "metadata": "root.checks", "header": "['module', '___EOS___']", "index": 220 }, { "content": "@app.route('/checks/id/<checkid>', methods=['GET', 'DELETE'])\n@login_required\ndef checks_by_id(checkid):\n \"\"\"Get info for or delete a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'DELETE':\n q = r.table(\"checks\").get(checkid).delete().run(rdb.conn)\n if q[\"deleted\"] == 1:\n return jsonify({'success': True})\n else:\n return jsonify({'success': False})", "metadata": "root.checks_by_id", "header": "['module', '___EOS___']", "index": 237 }, { "content": "@app.route('/checks/id/<checkid>/owner', methods=['GET', 'POST', 'DELETE'])\n@login_required\ndef check_owner(checkid):\n \"\"\"claim or unclaim a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n try:\n if request.json.get('owner'):\n q = r.table(\"checks\").get(checkid).update({\"owner\": str(request.json[\"owner\"])}).run(rdb.conn)\n else:\n abort(400)\n if q[\"replaced\"] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)\n elif request.method == 'DELETE':\n try:\n q = r.table(\"checks\").get(checkid).update({\"owner\": \"\"}).run(rdb.conn)\n if q[\"replaced\"] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)", "metadata": "root.check_owner", "header": "['module', '___EOS___']", "index": 256 }, { "content": "@app.route('/checks/id/<checkid>/next', methods=['GET', 'POST'])\n@login_required\ndef check_next(checkid):\n \"\"\"Reschedule a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n try:\n if not request.json.get('next'):\n abort(400)\n if request.json.get('next') == 'now':\n q = r.table(\"checks\").get(checkid).update({\"next\": time() - 1}).run(rdb.conn)\n else:\n q = r.table(\"checks\").get(checkid).update({\"next\": int(request.json[\"next\"])}).run(rdb.conn)\n if q[\"replaced\"] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)", "metadata": "root.check_next", "header": "['module', '___EOS___']", "index": 294 }, { "content": "@app.route('/checks/id/<checkid>/suspended', methods=['GET', 'POST'])\n@login_required\ndef check_suspended(checkid):\n \"\"\"Suspend a given check\"\"\"\n if request.method == 'GET':\n check = r.table(\"checks\").get(checkid).run(rdb.conn)\n if check:\n check['id'] = str(check['id'])\n return jsonify({'check': check})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n try:\n if not request.json.get('suspended'):\n abort(400)\n if request.json.get('suspended') is True:\n q = r.table(\"checks\").get(checkid).update({\"suspended\": True}).run(rdb.conn)\n elif request.json.get('suspended') is False:\n q = r.table(\"checks\").get(checkid).update({\"suspended\": False}).run(rdb.conn)\n else:\n abort(400)\n if q['replaced'] != 0:\n return jsonify({'success': True})\n else:\n abort(404)\n except Exception as err:\n logger.error(err)\n abort(400)", "metadata": "root.check_suspended", "header": "['module', '___EOS___']", "index": 324 }, { "content": "@app.route('/checks/state/<state>')\n@login_required\ndef check_state(state):\n \"\"\"List of checks in cluster in a given state [alerting/pending/suspended]\"\"\"\n if state == 'alerting':\n q = list(r.table(\"checks\").get_all(False, index=\"status\").run(rdb.conn))\n if q:\n return jsonify({'alerting': q})\n else:\n return jsonify({'alerting': []})\n elif state == 'pending':\n q = list(r.table(\"checks\").get_all(True, index=\"pending\").run(rdb.conn))\n if q:\n return jsonify({'pending': q})\n else:\n return jsonify({'pending': []})\n elif state == 'in_maintenance':\n q = list(r.table(\"checks\").get_all(True, index=\"in_maintenance\").run(rdb.conn))\n if q:\n return jsonify({'in_maintenance': q})\n else:\n return jsonify({'in_maintenance': []})\n elif state == 'suspended':\n q = list(r.table(\"checks\").get_all(True, index=\"suspended\").run(rdb.conn))\n if q:\n return jsonify({'suspended': q})\n else:\n return jsonify({'suspended': []})\n else:\n abort(400)", "metadata": "root.check_state", "header": "['module', '___EOS___']", "index": 356 }, { "content": "@app.route('/state_log/<hostname>/<checkname>', methods=['GET'])\n@login_required\ndef state_log_by_check(hostname, checkname):\n \"\"\"Get check history for a given check on a given host\"\"\"\n if request.method == 'GET':\n try:\n limit = request.args.get('limit', 10, type=int)\n except ValueError:\n abort(400)\n log = list(r.table(\"state_log\").filter({\"hostname\": hostname, \"check\": checkname}).order_by(r.desc(\"last\")).limit(limit).run(rdb.conn))\n if log:\n return jsonify({'state_log': sorted(log, key=lambda k: k['last'])})\n else:\n abort(404)\n else:\n abort(400)", "metadata": "root.state_log_by_check", "header": "['module', '___EOS___']", "index": 388 }, { "content": "@app.route('/notes/<hostname>', methods=['GET', 'POST'])\n@login_required\ndef list_notes(hostname):\n \"\"\"Retrieve a list of notes associated with a host. Or given\n {'user': 'username', 'note': 'some message'} post a note.\"\"\"\n if request.method == 'GET':\n try:\n #someday i should probably add offset support here and in the statelog\n limit = request.args.get('limit', 50, type=int)\n except ValueError:\n abort(400)\n notes = list(r.table(\"notes\").filter({\"hostname\": hostname}).order_by(r.desc(\"ts\")).limit(limit).run(rdb.conn))\n if notes:\n return jsonify({'notes': sorted(notes, key=lambda k: k['ts'])})\n else:\n abort(404)\n elif request.method == 'POST':\n if not request.json:\n abort(400)\n if not request.json.get(\"user\") or not request.json.get(\"note\"):\n abort(400)\n if not r.table(\"hosts\").get_all(hostname, index=\"hostname\").run(rdb.conn):\n abort(404)\n alerting = [x[\"check\"] for x in r.table(\"checks\").filter({\"h stname\": hostname, \"status\": False}).run(rdb.conn)]\n q = r.table(\"notes\").insert({'hostname': hostname, 'user': request.json.get(\"user\"),\n 'note': request.json.get(\"note\"), 'ts': time(), 'alerting': alerting}).run(rdb.conn)\n if q[\"inserted\"] == 1:\n return jsonify({'success': True})\n else:\n logger.error(q)\n abort(500)\n else:\n abort(400)", "metadata": "root.list_notes", "header": "['module', '___EOS___']", "index": 406 }, { "content": "@app.route('/global/clusters')\n@login_required\ndef global_clusters():\n \"\"\"List of known clusters and their id\"\"\"\n return jsonify({'clusters': app.config['GLOBAL_CLUSTERS']})", "metadata": "root.global_clusters", "header": "['module', '___EOS___']", "index": 441 }, { "content": "@app.route('/global/<clusterid>/checks/state/<state>')\n@login_required\ndef global_check_state(clusterid, state):\n \"\"\"Get a list of all checks in provided state for a given cluster\"\"\"\n if clusterid not in app.config['GLOBAL_CLUSTERS']:\n abort(400)\n if state in VALID_STATES:\n ckey = '%s:%s' % (clusterid, state)\n cached = cache.get(ckey)\n if cached:\n return jsonify({clusterid: cached})\n else:\n q = _get_remote_checks(clusterid, state)\n if q:\n cache.set(ckey, q)\n return jsonify({clusterid: q})\n else:\n abort(500)\n else:\n abort(400)", "metadata": "root.global_check_state", "header": "['module', '___EOS___']", "index": 448 }, { "content": "@app.route('/stats', defaults={'clusterid': None})\[email protected]('/stats/<clusterid>')\n@login_required\ndef stalker_stats(clusterid):\n \"\"\"Obtain stats for this cluster or one with a given clusterid\"\"\"\n default = {'qsize': None, 'failing': None, 'flapping': None,\n 'suspended': None, 'checks': None, 'pending': None}\n if not clusterid:\n q = _get_local_metrics()\n if q:\n return jsonify({app.config['LOCAL_CID']: q})\n else:\n return jsonify({app.config['LOCAL_CID']: default})\n else:\n if clusterid in app.config['GLOBAL_CLUSTERS']:\n ckey = '%s:%s' % (clusterid, 'stats')\n cached = cache.get(ckey)\n if cached:\n return jsonify({clusterid: cached})\n else:\n q = _get_remote_stats(clusterid)\n if q:\n cache.set(ckey, q)\n return jsonify({clusterid: q})\n else:\n return jsonify({clusterid: default})\n elif clusterid == 'all':\n q = {}\n q[app.config['LOCAL_CID']] = _get_local_metrics()\n for cid in app.config['GLOBAL_CLUSTERS'].keys():\n ckey = '%s:%s' % (cid, 'stats')\n cached = cache.get(ckey)\n if cached:\n q[cid] = cached\n else:\n q[cid] = _get_remote_stats(cid)\n if not q[cid]:\n q[cid] = default\n cache.set(ckey, q[cid])\n return jsonify({'all': q})\n else:\n abort(404)", "metadata": "root.stalker_stats", "header": "['module', '___EOS___']", "index": 470 }, { "content": "@app.route('/findhost')\n@login_required\ndef findhost():\n \"\"\"Just used for the type ahead\"\"\"\n # probably should cache hosts in memcached/redis for type ahead crap\n if not request.args.get('q'):\n abort(400)\n result = []\n for i in r.table(\"hosts\").filter(\n r.row[\"hostname\"].match(\"^%s\" % request.args.get('q')) | r.row[\"ip\"].match(\"^%s\" % request.args.get('q'))\n ).pluck({\"hostname\": True, \"ip\": True}).run(rdb.conn):\n if i['hostname'].startswith(request.args.get('q')):\n result.append(i['hostname'])\n else:\n result.append(i['ip'])\n return \",\".join(result)", "metadata": "root.findhost", "header": "['module', '___EOS___']", "index": 514 }, { "content": "@app.route('/')\n@login_required\ndef index():\n return render_template('states.html', state='alerting')", "metadata": "root.index", "header": "['module', '___EOS___']", "index": 532 }, { "content": "@app.route('/view/states', defaults={'state': None})\[email protected]('/view/states/<state>')\n@login_required\ndef view_states(state):\n if state:\n if state in VALID_STATES:\n return render_template('states.html', state=state)\n else:\n abort(404)\n else:\n return render_template('states.html', state='alerting')", "metadata": "root.view_states", "header": "['module', '___EOS___']", "index": 538 }, { "content": "@app.route('/view/checks')\n@login_required\ndef view_checks():\n return render_template('allchecks.html')", "metadata": "root.view_checks", "header": "['module', '___EOS___']", "index": 551 }, { "content": "@app.route('/view/host/', defaults={'hostname': None})\[email protected]('/view/host/<hostname>')\n@login_required\ndef view_single_host(hostname):\n if request.args.get('search'):\n hostname = request.args.get('search')\n if not hostname:\n abort(404)\n else:\n return render_template('host.html', target=hostname)", "metadata": "root.view_single_host", "header": "['module', '___EOS___']", "index": 557 }, { "content": "@app.route('/view/user/<username>')\n@login_required\ndef view_user(username):\n return render_template('user.html')", "metadata": "root.view_user", "header": "['module', '___EOS___']", "index": 569 }, { "content": "@app.route('/global/view/states', defaults={'state': None})\[email protected]('/global/view/states/<state>/')\n@login_required\ndef view_global(state):\n \"\"\"Global view of provided state [alerting/pending/suspended]\"\"\"\n if state:\n if state in VALID_STATES:\n return render_template('globalstates.html', state=state)\n else:\n abort(404)\n else:\n return render_template('globalstates.html', state='alerting')", "metadata": "root.view_global", "header": "['module', '___EOS___']", "index": 575 }, { "content": "@app.route('/signout')\ndef signout():\n \"\"\"Sign out\"\"\"\n session.pop('logged_in', None)\n return render_template('signout.html')", "metadata": "root.signout", "header": "['module', '___EOS___']", "index": 589 }, { "content": "@app.route('/signin', methods=[\"GET\", \"POST\"])\ndef signin():\n \"\"\"Sign in\"\"\"\n form = SignInForm()\n if form.validate_on_submit():\n username = form.username.data.strip()\n password = form.password.data.strip()\n if is_valid_login(username, password):\n session['theme'] = _get_users_theme(username)\n session['logged_in'] = True\n session['username'] = username\n if form.remember_me.data:\n session.permanent = True\n else:\n session.permanent = False\n if request.args.get('next') == 'signin':\n return redirect(\"/\")\n else:\n return redirect(request.args.get('next') or request.referrer or \"/\")\n else:\n return render_template('signin.html', form=form, error=\"Failed\")\n return render_template('signin.html', form=form, error=None)", "metadata": "root.signin", "header": "['module', '___EOS___']", "index": 596 }, { "content": "@app.errorhandler(404)\ndef page_not_found(e):\n return render_template('404.html'), 404", "metadata": "root.page_not_found", "header": "['module', '___EOS___']", "index": 620 }, { "content": "@app.route('/routes/list', methods=['GET'])\n@login_required\ndef help():\n \"\"\"Show endpoints\"\"\"\n func_list = {}\n for rule in app.url_map.iter_rules():\n if rule.endpoint != 'static':\n func_list[rule.rule] = app.view_functions[rule.endpoint].__doc__\n return jsonify(func_list)", "metadata": "root.help", "header": "['module', '___EOS___']", "index": 625 } ]

[ { "span": "from bson import ObjectId", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 25 }, { "span": "from rethinkdb.errors import RqlDriverError, RqlRuntimeError", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 60 } ]

[]

1

false

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Unused import

arctic-nmt/nmt/nmt/homogeneous_data.py

[ { "content": "import numpy\n\nimport itertools\nimport operator\n\nfrom tm_dataset import PytablesBitextIterator \n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class HomogenousData(PytablesBitextIterator):\n\n\n", "metadata": "root.HomogenousData", "header": "['module', '___EOS___']", "index": 7 }, { "content": " def __init__(self, *args, **kwargs):\n PytablesBitextIterator.__init__(self, *args, **kwargs)\n self.batch_iter = None", "metadata": "root.HomogenousData.__init__", "header": "['class', 'HomogenousData', '(', 'PytablesBitextIterator', ')', ':', '___EOS___']", "index": 9 }, { "content": " def get_homogenous_batch_iter(self):\n end_of_iter = False\n while True:\n k_batches = 10\n batch_size = self.batch_size\n x = []\n y = []\n for k in xrange(k_batches):\n try:\n dx, dy = PytablesBitextIterator.next(self)\n except StopIteration:\n end_of_iter = True\n break\n if dx == None or dy == None:\n break\n x += dx\n y += dy\n if len(x) <= 0 or len(y) <= 0:\n raise StopIteration\n lens = numpy.asarray([map(len, x), map(len, y)])\n order = numpy.argsort(lens.max(axis=0)) if k_batches > 1 else numpy.arange(len(x))\n for k in range(k_batches):\n if k * batch_size > len(order):\n break\n indices = order[k * batch_size:(k + 1) * batch_size]\n yield [[x[ii] for ii in indices], [y[ii] for ii in indices]]\n\n if end_of_iter:\n raise StopIteration", "metadata": "root.HomogenousData.get_homogenous_batch_iter", "header": "['class', 'HomogenousData', '(', 'PytablesBitextIterator', ')', ':', '___EOS___']", "index": 13 }, { "content": " def next(self, peek=False):\n if not self.batch_iter:\n self.batch_iter = self.get_homogenous_batch_iter()\n if not self.batch_iter:\n raise StopIteration\n try:\n batch = next(self.batch_iter)\n except StopIteration:\n self.batch_iter = None\n raise StopIteration\n\n return batch[0], batch[1]", "metadata": "root.HomogenousData.next", "header": "['class', 'HomogenousData', '(', 'PytablesBitextIterator', ')', ':', '___EOS___']", "index": 43 } ]

[ { "span": "import itertools", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 16 }, { "span": "import operator", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 15 } ]

[]

1

false

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Unused import

CollabQ/CollabQ/.google_appengine/google/appengine/api/datastore_entities.py

[ { "content": "#!/usr/bin/env python\n#\n# Copyright 2007 Google Inc.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n#\n\n\"\"\"Classes for common kinds, including Contact, Message, and Event.\n\nMost of these kinds are based on the gd namespace \"kinds\" from GData:\n\n http://code.google.com/apis/gdata/common-elements.html\n\"\"\"\n\n\n\n\n\nimport types\nimport urlparse\nfrom xml.sax import saxutils\nfrom google.appengine.datastore import datastore_pb\nfrom google.appengine.api import datastore\nfrom google.appengine.api import datastore_errors\nfrom google.appengine.api import datastore_types\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class GdKind(datastore.Entity):\n \"\"\" A base class for gd namespace kinds.\n\n This class contains common logic for all gd namespace kinds. For example,\n this class translates datastore (app id, kind, key) tuples to tag:\n URIs appropriate for use in <key> tags.\n \"\"\"\n\n HEADER = u\"\"\"<entry xmlns:gd='http://schemas.google.com/g/2005'>\n <category scheme='http://schemas.google.com/g/2005#kind'\n term='http://schemas.google.com/g/2005#%s' />\"\"\"\n FOOTER = u\"\"\"\n</entry>\"\"\"\n\n _kind_properties = set()\n _contact_properties = set()\n\n\n\n\n\n\n", "metadata": "root.GdKind", "header": "['module', '___EOS___']", "index": 36 }, { "content": " def __init__(self, kind, title, kind_properties, contact_properties=[]):\n \"\"\" Ctor.\n\n title is the name of this particular entity, e.g. Bob Jones or Mom's\n Birthday Party.\n\n kind_properties is a list of property names that should be included in\n this entity's XML encoding as first-class XML elements, instead of\n <property> elements. 'title' and 'content' are added to kind_properties\n automatically, and may not appear in contact_properties.\n\n contact_properties is a list of property names that are Keys that point to\n Contact entities, and should be included in this entity's XML encoding as\n <gd:who> elements. If a property name is included in both kind_properties\n and contact_properties, it is treated as a Contact property.\n\n Args:\n kind: string\n title: string\n kind_properties: list of strings\n contact_properties: list of string\n \"\"\"\n datastore.Entity.__init__(self, kind)\n\n if not isinstance(title, types.StringTypes):\n raise datastore_errors.BadValueError(\n 'Expected a string for title; received %s (a %s).' %\n (title, datastore_types.typename(title)))\n self['title'] = title\n self['content'] = ''\n\n self._contact_properties = set(contact_properties)\n assert not self._contact_properties.intersection(self.keys())\n\n self._kind_properties = set(kind_properties) - self._contact_properties\n self._kind_properties.add('title')\n self._kind_properties.add('content')", "metadata": "root.GdKind.__init__", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 53 }, { "content": " def _KindPropertiesToXml(self):\n \"\"\" Convert the properties that are part of this gd kind to XML. For\n testability, the XML elements in the output are sorted alphabetically\n by property name.\n\n Returns:\n string # the XML representation of the gd kind properties\n \"\"\"\n properties = self._kind_properties.intersection(set(self.keys()))\n\n xml = u''\n for prop in sorted(properties):\n prop_xml = saxutils.quoteattr(prop)[1:-1]\n\n value = self[prop]\n has_toxml = (hasattr(value, 'ToXml') or\n isinstance(value, list) and hasattr(value[0], 'ToXml'))\n\n for val in self._XmlEscapeValues(prop):\n if has_toxml:\n xml += '\\n %s' % val\n else:\n xml += '\\n <%s>%s</%s>' % (prop_xml, val, prop_xml)\n\n return xml", "metadata": "root.GdKind._KindPropertiesToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 91 }, { "content": " def _ContactPropertiesToXml(self):\n \"\"\" Convert this kind's Contact properties kind to XML. For testability,\n the XML elements in the output are sorted alphabetically by property name.\n\n Returns:\n string # the XML representation of the Contact properties\n \"\"\"\n properties = self._contact_properties.intersection(set(self.keys()))\n\n xml = u''\n for prop in sorted(properties):\n values = self[prop]\n if not isinstance(values, list):\n values = [values]\n\n for value in values:\n assert isinstance(value, datastore_types.Key)\n xml += \"\"\"\n <gd:who rel=\"http://schemas.google.com/g/2005#%s.%s>\n <gd:entryLink href=\"%s\" />\n </gd:who>\"\"\" % (self.kind().lower(), prop, value.ToTagUri())\n\n return xml", "metadata": "root.GdKind._ContactPropertiesToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 118 }, { "content": " def _LeftoverPropertiesToXml(self):\n \"\"\" Convert all of this entity's properties that *aren't* part of this gd\n kind to XML.\n\n Returns:\n string # the XML representation of the leftover properties\n \"\"\"\n leftovers = set(self.keys())\n leftovers -= self._kind_properties\n leftovers -= self._contact_properties\n if leftovers:\n return u'\\n ' + '\\n '.join(self._PropertiesToXml(leftovers))\n else:\n return u''", "metadata": "root.GdKind._LeftoverPropertiesToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 143 }, { "content": " def ToXml(self):\n \"\"\" Returns an XML representation of this entity, as a string.\n \"\"\"\n xml = GdKind.HEADER % self.kind().lower()\n xml += self._KindPropertiesToXml()\n xml += self._ContactPropertiesToXml()\n xml += self._LeftoverPropertiesToXml()\n xml += GdKind.FOOTER\n return xml", "metadata": "root.GdKind.ToXml", "header": "['class', 'GdKind', '(', 'datastore', '.', 'Entity', ')', ':', '___EOS___']", "index": 158 }, { "content": "class Message(GdKind):\n \"\"\"A message, such as an email, a discussion group posting, or a comment.\n\n Includes the message title, contents, participants, and other properties.\n\n This is the gd Message kind. See:\n http://code.google.com/apis/gdata/common-elements.html#gdMessageKind\n\n These properties are meaningful. They are all optional.\n\n property name property type meaning\n -------------------------------------\n title string message subject\n content string message body\n from Contact* sender\n to Contact* primary recipient\n cc Contact* CC recipient\n bcc Contact* BCC recipient\n reply-to Contact* intended recipient of replies\n link Link* attachment\n category Category* tag or label associated with this message\n geoPt GeoPt* geographic location the message was posted from\n rating Rating* message rating, as defined by the application\n\n * means this property may be repeated.\n\n The Contact properties should be Keys of Contact entities. They are\n represented in the XML encoding as linked <gd:who> elements.\n \"\"\"\n KIND_PROPERTIES = ['title', 'content', 'link', 'category', 'geoPt', 'rating']\n CONTACT_PROPERTIES = ['from', 'to', 'cc', 'bcc', 'reply-to']\n", "metadata": "root.Message", "header": "['module', '___EOS___']", "index": 169 }, { "content": " def __init__(self, title, kind='Message'):\n GdKind.__init__(self, kind, title, Message.KIND_PROPERTIES,\n Message.CONTACT_PROPERTIES)", "metadata": "root.Message.__init__", "header": "['class', 'Message', '(', 'GdKind', ')', ':', '___EOS___']", "index": 201 }, { "content": "class Event(GdKind):\n \"\"\"A calendar event.\n\n Includes the event title, description, location, organizer, start and end\n time, and other details.\n\n This is the gd Event kind. See:\n http://code.google.com/apis/gdata/common-elements.html#gdEventKind\n\n These properties are meaningful. They are all optional.\n\n property name property type meaning\n -------------------------------------\n title string event name\n content string event description\n author string the organizer's name\n where string* human-readable location (not a GeoPt)\n startTime timestamp start time\n endTime timestamp end time\n eventStatus string one of the Event.Status values\n link Link* page with more information\n category Category* tag or label associated with this event\n attendee Contact* attendees and other related people\n\n * means this property may be repeated.\n\n The Contact properties should be Keys of Contact entities. They are\n represented in the XML encoding as linked <gd:who> elements.\n \"\"\"\n KIND_PROPERTIES = ['title', 'content', 'author', 'where', 'startTime',\n 'endTime', 'eventStatus', 'link', 'category']\n CONTACT_PROPERTIES = ['attendee']\n\n class Status:\n CONFIRMED = 'confirmed'\n TENTATIVE = 'tentative'\n CANCELED = 'canceled'\n\n", "metadata": "root.Event", "header": "['module', '___EOS___']", "index": 206 }, { "content": " def __init__(self, title, kind='Event'):\n GdKind.__init__(self, kind, title, Event.KIND_PROPERTIES,\n Event.CONTACT_PROPERTIES)", "metadata": "root.Event.__init__", "header": "['class', 'Event', '(', 'GdKind', ')', ':', '___EOS___']", "index": 244 }, { "content": " def ToXml(self):\n \"\"\" Override GdKind.ToXml() to special-case author, gd:where, gd:when, and\n gd:eventStatus.\n \"\"\"\n xml = GdKind.HEADER % self.kind().lower()\n\n self._kind_properties = set(Contact.KIND_PROPERTIES)\n xml += self._KindPropertiesToXml()\n\n if 'author' in self:\n xml += \"\"\"\n <author><name>%s</name></author>\"\"\" % self['author']\n\n if 'eventStatus' in self:\n xml += \"\"\"\n <gd:eventStatus value=\"http://schemas.google.com/g/2005#event.%s\" />\"\"\" % (\n self['eventStatus'])\n\n if 'where' in self:\n lines = ['<gd:where valueString=\"%s\" />' % val\n for val in self._XmlEscapeValues('where')]\n xml += '\\n ' + '\\n '.join(lines)\n\n iso_format = '%Y-%m-%dT%H:%M:%S'\n xml += '\\n <gd:when'\n for key in ['startTime', 'endTime']:\n if key in self:\n xml += ' %s=\"%s\"' % (key, self[key].isoformat())\n xml += ' />'\n\n self._kind_properties.update(['author', 'where', 'startTime', 'endTime',\n 'eventStatus'])\n xml += self._ContactPropertiesToXml()\n xml += self._LeftoverPropertiesToXml()\n xml += GdKind.FOOTER\n return xml", "metadata": "root.Event.ToXml", "header": "['class', 'Event', '(', 'GdKind', ')', ':', '___EOS___']", "index": 248 }, { "content": "class Contact(GdKind):\n \"\"\"A contact: a person, a venue such as a club or a restaurant, or an\n organization.\n\n This is the gd Contact kind. See:\n http://code.google.com/apis/gdata/common-elements.html#gdContactKind\n\n Most of the information about the contact is in the <gd:contactSection>\n element; see the reference section for that element for details.\n\n These properties are meaningful. They are all optional.\n\n property name property type meaning\n -------------------------------------\n title string contact's name\n content string notes\n email Email* email address\n geoPt GeoPt* geographic location\n im IM* IM address\n phoneNumber Phonenumber* phone number\n postalAddress PostalAddress* mailing address\n link Link* link to more information\n category Category* tag or label associated with this contact\n\n * means this property may be repeated.\n \"\"\"\n CONTACT_SECTION_HEADER = \"\"\"\n <gd:contactSection>\"\"\"\n CONTACT_SECTION_FOOTER = \"\"\"\n </gd:contactSection>\"\"\"\n\n KIND_PROPERTIES = ['title', 'content', 'link', 'category']\n\n CONTACT_SECTION_PROPERTIES = ['email', 'geoPt', 'im', 'phoneNumber',\n 'postalAddress']\n\n", "metadata": "root.Contact", "header": "['module', '___EOS___']", "index": 286 }, { "content": " def __init__(self, title, kind='Contact'):\n GdKind.__init__(self, kind, title, Contact.KIND_PROPERTIES)", "metadata": "root.Contact.__init__", "header": "['class', 'Contact', '(', 'GdKind', ')', ':', '___EOS___']", "index": 322 }, { "content": " def ToXml(self):\n \"\"\" Override GdKind.ToXml() to put some properties inside a\n gd:contactSection.\n \"\"\"\n xml = GdKind.HEADER % self.kind().lower()\n\n self._kind_properties = set(Contact.KIND_PROPERTIES)\n xml += self._KindPropertiesToXml()\n\n xml += Contact.CONTACT_SECTION_HEADER\n self._kind_properties = set(Contact.CONTACT_SECTION_PROPERTIES)\n xml += self._KindPropertiesToXml()\n xml += Contact.CONTACT_SECTION_FOOTER\n\n self._kind_properties.update(Contact.KIND_PROPERTIES)\n xml += self._LeftoverPropertiesToXml()\n xml += GdKind.FOOTER\n return xml", "metadata": "root.Contact.ToXml", "header": "['class', 'Contact', '(', 'GdKind', ')', ':', '___EOS___']", "index": 325 } ]

[ { "span": "import urlparse", "start_line": 29, "start_column": 0, "end_line": 29, "end_column": 15 }, { "span": "from google.appengine.datastore import datastore_pb", "start_line": 31, "start_column": 0, "end_line": 31, "end_column": 51 } ]

[]

1

false

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Except block handles 'BaseException'

glenjarvis/ansible_tutorial/src/example_03/ansible_module.py

[ { "content": "def get_distribution():\n ''' return the distribution name '''\n if platform.system() == 'Linux':\n try:\n distribution = platform.linux_distribution()[0].capitalize()\n if not distribution and os.path.isfile('/etc/system-release'):\n distribution = platform.linux_distribution(supported_dists=['system'])[0].capitalize()\n if 'Amazon' in distribution:\n distribution = 'Amazon'\n else:\n distribution = 'OtherLinux'\n except:\n # FIXME: MethodMissing, I assume?\n distribution = platform.dist()[0].capitalize()\n else:\n distribution = None\n return distribution", "metadata": "root.get_distribution", "header": "['module', '___EOS___']", "index": 286 }, { "content": " def is_nfs_path(self, path):\n \"\"\"\n Returns a tuple containing (True, selinux_context) if the given path\n is on a NFS mount point, otherwise the return will be (False, None).\n \"\"\"\n try:\n f = open('/proc/mounts', 'r')\n mount_data = f.readlines()\n f.close()\n except:\n return (False, None)\n path_mount_point = self.find_mount_point(path)\n for line in mount_data:\n (device, mount_point, fstype, options, rest) = line.split(' ', 4)\n if path_mount_point == mount_point and 'nfs' in fstype:\n nfs_context = self.selinux_context(path_mount_point)\n return (True, nfs_context)\n return (False, None)", "metadata": "root.AnsibleModule.is_nfs_path", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 517 }, { "content": " def _check_argument_types(self):\n ''' ensure all arguments have the requested type '''\n for (k, v) in self.argument_spec.iteritems():\n wanted = v.get('type', None)\n if wanted is None:\n continue\n if k not in self.params:\n continue\n\n value = self.params[k]\n is_invalid = False\n\n if wanted == 'str':\n if not isinstance(value, basestring):\n self.params[k] = str(value)\n elif wanted == 'list':\n if not isinstance(value, list):\n if isinstance(value, basestring):\n self.params[k] = value.split(\",\")\n elif isinstance(value, int) or isinstance(value, float):\n self.params[k] = [ str(value) ]\n else:\n is_invalid = True\n elif wanted == 'dict':\n if not isinstance(value, dict):\n if isinstance(value, basestring):\n if value.startswith(\"{\"):\n try:\n self.params[k] = json.loads(value)\n except:\n (result, exc) = self.safe_eval(value, dict(), include_exceptions=True)\n if exc is not None:\n self.fail_json(msg=\"unable to evaluate dictionary for %s\" % k)\n self.params[k] = result\n elif '=' in value:\n self.params[k] = dict([x.split(\"=\", 1) for x in value.split(\",\")])\n else:\n self.fail_json(msg=\"dictionary requested, could not parse JSON or key=value\")\n else:\n is_invalid = True\n elif wanted == 'bool':\n if not isinstance(value, bool):\n if isinstance(value, basestring):\n self.params[k] = self.boolean(value)\n else:\n is_invalid = True\n elif wanted == 'int':\n if not isinstance(value, int):\n if isinstance(value, basestring):\n self.params[k] = int(value)\n else:\n is_invalid = True\n elif wanted == 'float':\n if not isinstance(value, float):\n if isinstance(value, basestring):\n self.params[k] = float(value)\n else:\n is_invalid = True\n else:\n self.fail_json(msg=\"implementation error: unknown type %s requested for %s\" % (wanted, k))\n\n if is_invalid:\n self.fail_json(msg=\"argument %s is of invalid type: %s, required: %s\" % (k, type(value), wanted))", "metadata": "root.AnsibleModule._check_argument_types", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 825 }, { "content": " def _set_cwd(self):\n try:\n cwd = os.getcwd()\n if not os.access(cwd, os.F_OK|os.R_OK):\n raise\n return cwd\n except:\n # we don't have access to the cwd, probably because of sudo. \n # Try and move to a neutral location to prevent errors\n for cwd in [os.path.expandvars('$HOME'), tempfile.gettempdir()]:\n try:\n if os.access(cwd, os.F_OK|os.R_OK):\n os.chdir(cwd)\n return cwd\n except:\n pass\n # we won't error here, as it may *not* be a problem, \n # and we don't want to break modules unnecessarily\n return None ", "metadata": "root.AnsibleModule._set_cwd", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 986 }, { "content": " def run_command(self, args, check_rc=False, close_fds=False, executable=None, data=None, binary_data=False, path_prefix=None, cwd=None, use_unsafe_shell=False):\n '''\n Execute a command, returns rc, stdout, and stderr.\n args is the command to run\n If args is a list, the command will be run with shell=False.\n If args is a string and use_unsafe_shell=False it will split args to a list and run with shell=False\n If args is a string and use_unsafe_shell=True it run with shell=True.\n Other arguments:\n - check_rc (boolean) Whether to call fail_json in case of\n non zero RC. Default is False.\n - close_fds (boolean) See documentation for subprocess.Popen().\n Default is False.\n - executable (string) See documentation for subprocess.Popen().\n Default is None.\n '''\n\n shell = False\n if isinstance(args, list):\n if use_unsafe_shell:\n args = \" \".join([pipes.quote(x) for x in args])\n shell = True\n elif isinstance(args, basestring) and use_unsafe_shell:\n shell = True\n elif isinstance(args, basestring):\n args = shlex.split(args.encode('utf-8'))\n else:\n msg = \"Argument 'args' to run_command must be list or string\"\n self.fail_json(rc=257, cmd=args, msg=msg)\n\n # expand things like $HOME and ~\n if not shell:\n args = [ os.path.expandvars(os.path.expanduser(x)) for x in args ]\n\n rc = 0\n msg = None\n st_in = None\n\n # Set a temporart env path if a prefix is passed\n env=os.environ\n if path_prefix:\n env['PATH']=\"%s:%s\" % (path_prefix, env['PATH'])\n\n # create a printable version of the command for use\n # in reporting later, which strips out things like\n # passwords from the args list\n if isinstance(args, list):\n clean_args = \" \".join(pipes.quote(arg) for arg in args)\n else:\n clean_args = args\n\n # all clean strings should return two match groups, \n # where the first is the CLI argument and the second \n # is the password/key/phrase that will be hidden\n clean_re_strings = [\n # this removes things like --password, --pass, --pass-wd, etc.\n # optionally followed by an '=' or a space. The password can \n # be quoted or not too, though it does not care about quotes\n # that are not balanced\n # source: http://blog.stevenlevithan.com/archives/match-quoted-string\n r'([-]{0,2}pass[-]?(?:word|wd)?[=\\s]?)((?:[\"\\'])?(?:[^\\s])*(?:\\1)?)',\n # TODO: add more regex checks here\n ]\n for re_str in clean_re_strings:\n r = re.compile(re_str)\n clean_args = r.sub(r'\\1********', clean_args)\n\n if data:\n st_in = subprocess.PIPE\n\n kwargs = dict(\n executable=executable,\n shell=shell,\n close_fds=close_fds,\n stdin= st_in,\n stdout=subprocess.PIPE,\n stderr=subprocess.PIPE \n )\n\n if path_prefix:\n kwargs['env'] = env\n if cwd and os.path.isdir(cwd):\n kwargs['cwd'] = cwd\n\n # store the pwd\n prev_dir = os.getcwd()\n\n # make sure we're in the right working directory\n if cwd and os.path.isdir(cwd):\n try:\n os.chdir(cwd)\n except (OSError, IOError), e:\n self.fail_json(rc=e.errno, msg=\"Could not open %s , %s\" % (cwd, str(e)))\n\n try:\n cmd = subprocess.Popen(args, **kwargs)\n\n if data:\n if not binary_data:\n data += '\\n'\n out, err = cmd.communicate(input=data)\n rc = cmd.returncode\n except (OSError, IOError), e:\n self.fail_json(rc=e.errno, msg=str(e), cmd=clean_args)\n except:\n self.fail_json(rc=257, msg=traceback.format_exc(), cmd=clean_args)\n\n if rc != 0 and check_rc:\n msg = err.rstrip()\n self.fail_json(cmd=clean_args, rc=rc, stdout=out, stderr=err, msg=msg)\n\n # reset the pwd\n os.chdir(prev_dir)\n\n return (rc, out, err)", "metadata": "root.AnsibleModule.run_command", "header": "['class', 'AnsibleModule', '(', 'object', ')', ':', '___EOS___']", "index": 1193 } ]

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Unused local variable

gallantlab/pycortex/cortex/polyutils.py

[ { "content": " def surface_gradient(self, scalars, at_verts=True):\n \"\"\"Gradient of a function with values `scalars` at each vertex on the surface.\n If `at_verts`, returns values at each vertex. Otherwise, returns values at each\n face.\n\n Parameters\n ----------\n scalars : 1D ndarray, shape (total_verts,)\n A scalar-valued function across the cortex.\n at_verts : bool, optional\n If True (default), values will be returned for each vertex. Otherwise,\n values will be retruned for each face.\n\n Returns\n -------\n gradu : 2D ndarray, shape (total_verts,3) or (total_polys,3)\n Contains the x-, y-, and z-axis gradients of the given `scalars` at either\n each vertex (if `at_verts` is True) or each face.\n \"\"\"\n pu = scalars[self.polys]\n fe12, fe23, fe31 = [f.T for f in self._facenorm_cross_edge]\n pu1, pu2, pu3 = pu.T\n fa = self.face_areas\n\n # numexpr is much faster than doing this using numpy!\n #gradu = ((fe12.T * pu[:,2] +\n # fe23.T * pu[:,0] +\n # fe31.T * pu[:,1]) / (2 * self.face_areas)).T\n gradu = np.nan_to_num(ne.evaluate(\"(fe12 * pu3 + fe23 * pu1 + fe31 * pu2) / (2 * fa)\").T)\n \n if at_verts:\n return (self.connected.dot(gradu).T / self.connected.sum(1).A.squeeze()).T\n return gradu", "metadata": "root.Surface.surface_gradient", "header": "['class', 'Surface', '(', 'object', ')', ':', '___EOS___']", "index": 246 }, { "content": " def geodesic_distance(self, verts, m=1.0, fem=False):\n \"\"\"Minimum mesh geodesic distance (in mm) from each vertex in surface to any\n vertex in the collection `verts`.\n\n Geodesic distance is estimated using heat-based method (see 'Geodesics in Heat',\n Crane et al, 2012). Diffusion of heat along the mesh is simulated and then\n used to infer geodesic distance. The duration of the simulation is controlled\n by the parameter `m`. Larger values of `m` will smooth & regularize the distance\n computation. Smaller values of `m` will roughen and will usually increase error\n in the distance computation. The default value of 1.0 is probably pretty good.\n\n This function caches some data (sparse LU factorizations of the laplace-beltrami\n operator and the weighted adjacency matrix), so it will be much faster on\n subsequent runs.\n\n The time taken by this function is independent of the number of vertices in verts.\n\n Parameters\n ----------\n verts : 1D array-like of ints\n Set of vertices to compute distance from. This function returns the shortest\n distance to any of these vertices from every vertex in the surface.\n m : float, optional\n Reverse Euler step length. The optimal value is likely between 0.5 and 1.5.\n Default is 1.0, which should be fine for most cases.\n fem : bool, optional\n Whether to use Finite Element Method lumped mass matrix. Wasn't used in \n Crane 2012 paper. Doesn't seem to help any.\n\n Returns\n -------\n dist : 1D ndarray, shape (total_verts,)\n Geodesic distance (in mm) from each vertex in the surface to the closest\n vertex in `verts`.\n \"\"\"\n npt = len(self.pts)\n if m not in self._rlfac_solvers or m not in self._nLC_solvers:\n B, D, W, V = self.laplace_operator\n nLC = W - V # negative laplace matrix\n if not fem:\n spD = sparse.dia_matrix((D,[0]), (npt,npt)).tocsr() # lumped mass matrix\n else:\n spD = B\n \n t = m * self.avg_edge_length ** 2 # time of heat evolution\n lfac = spD - t * nLC # backward Euler matrix\n\n # Exclude rows with zero weight (these break the sparse LU, that finicky fuck)\n goodrows = np.nonzero(~np.array(lfac.sum(0) == 0).ravel())[0]\n self._goodrows = goodrows\n self._rlfac_solvers[m] = sparse.linalg.dsolve.factorized(lfac[goodrows][:,goodrows])\n self._nLC_solvers[m] = sparse.linalg.dsolve.factorized(nLC[goodrows][:,goodrows])\n\n # Solve system to get u, the heat values\n u0 = np.zeros((npt,)) # initial heat values\n u0[verts] = 1.0\n goodu = self._rlfac_solvers[m](u0[self._goodrows])\n u = np.zeros((npt,))\n u[self._goodrows] = goodu\n\n # Compute grad u at each face\n gradu = self.surface_gradient(u, at_verts=False)\n \n # Compute X (normalized grad u)\n #X = np.nan_to_num((-gradu.T / np.sqrt((gradu**2).sum(1))).T)\n graduT = gradu.T\n gusum = ne.evaluate(\"sum(gradu ** 2, 1)\")\n X = np.nan_to_num(ne.evaluate(\"-graduT / sqrt(gusum)\").T)\n\n # Compute integrated divergence of X at each vertex\n #x1 = x2 = x3 = np.zeros((X.shape[0],))\n c32, c13, c21 = self._cot_edge\n x1 = 0.5 * (c32 * X).sum(1)\n x2 = 0.5 * (c13 * X).sum(1)\n x3 = 0.5 * (c21 * X).sum(1)\n \n conn1, conn2, conn3 = self._polyconn\n divx = conn1.dot(x1) + conn2.dot(x2) + conn3.dot(x3)\n\n # Compute phi (distance)\n goodphi = self._nLC_solvers[m](divx[self._goodrows])\n phi = np.zeros((npt,))\n phi[self._goodrows] = goodphi - goodphi.min()\n\n # Ensure that distance is zero for selected verts\n phi[verts] = 0.0\n\n return phi", "metadata": "root.Surface.geodesic_distance", "header": "['class', 'Surface', '(', 'object', ')', ':', '___EOS___']", "index": 445 } ]

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2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 0, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Variable defined multiple times

slinderman/pyhawkes/experiments/hippocampus.py

[ { "content": "def plot_locations(result, offset=0):\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs, scale=False)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n\n fig = create_figure(figsize=(1.4,2.9))\n ax = create_axis_at_location(fig, .3, 1.7, 1, 1)\n\n # toplot = np.random.choice(np.arange(K), size=4, replace=False)\n toplot = np.linspace(offset,K+offset, 4, endpoint=False).astype(np.int)\n print toplot\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n plot_colors = [wheel_cmap((np.pi+pfs_th[node_perm[j]])/(2*np.pi)) for j in toplot]\n\n for i,k in enumerate(node_perm):\n # plt.text(pfs[k,0], pfs[k,1], \"%d\" % i)\n if i not in toplot:\n color = 0.8 * np.ones(3)\n\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=1.0)\n\n for i,k in enumerate(node_perm):\n # plt.text(pfs[k,0], pfs[k,1], \"%d\" % i)\n if i in toplot:\n j = np.where(toplot==i)[0][0]\n color = plot_colors[j]\n\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k])\n\n\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"True Place Fields\")\n plt.xlim(-45,45)\n plt.xticks([-40, -20, 0, 20, 40])\n # plt.xlabel(\"$x$\")\n plt.ylim(-45,45)\n plt.yticks([-40, -20, 0, 20, 40])\n # plt.ylabel(\"$y$\")\n\n # Now plot the inferred locations\n # plt.subplot(212, aspect='equal')\n ax = create_axis_at_location(fig, .3, .2, 1, 1)\n for L in Ls_rot[::2]:\n for j in np.random.permutation(len(toplot)):\n k = node_perm[toplot][j]\n color = plot_colors[j]\n plt.plot(L[k,0], L[k,1], 'o',\n markerfacecolor=color, markeredgecolor=\"none\",\n markersize=4, alpha=0.25)\n\n plt.title(\"Locations Samples\")\n # plt.xlim(-30, 30)\n # plt.xticks([])\n # plt.ylim(-30, 30)\n # plt.yticks([])\n plt.xlim(-3, 3)\n plt.xticks([-2, 0, 2])\n plt.ylim(-3, 3)\n plt.yticks([-2, 0, 2])\n\n plt.savefig(os.path.join(results_dir, \"locations_%d.pdf\" % offset))\n # plt.show()", "metadata": "root.plot_locations", "header": "['module', '___EOS___']", "index": 293 }, { "content": "def plot_mean_locations():\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n\n Ls_mean = np.mean(Ls_rot, 0)\n\n fig = create_figure(figsize=(1.4,2.5))\n plt.subplot(211, aspect='equal')\n\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2*np.pi))\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"True Place Fields\")\n plt.xlim(-45, 45)\n # plt.xlabel(\"$x$\")\n plt.xticks([-40, -20, 0, 20, 40], [])\n plt.ylim(-45, 45)\n # plt.ylabel(\"$y$\")\n plt.yticks([-40, -20, 0, 20, 40], [])\n\n # Now plot the inferred locations\n\n\n plt.subplot(212, aspect='equal')\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2*np.pi))\n plt.plot(Ls_mean[k,0], Ls_mean[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"Mean Locations\")\n plt.xlim(-30, 30)\n plt.xticks([])\n plt.ylim(-30, 30)\n plt.yticks([])\n\n plt.tight_layout()\n plt.savefig(os.path.join(results_dir, \"hipp_mean_locations.pdf\"))\n plt.show()", "metadata": "root.plot_mean_locations", "header": "['module', '___EOS___']", "index": 368 }, { "content": "def plot_mean_locations():\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n\n Ls_mean = np.mean(Ls_rot, 0)\n\n fig = create_figure(figsize=(1.4,2.5))\n plt.subplot(211, aspect='equal')\n\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2*np.pi))\n plt.plot(pfs[k,0], pfs[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"True Place Fields\")\n plt.xlim(-45, 45)\n # plt.xlabel(\"$x$\")\n plt.xticks([-40, -20, 0, 20, 40], [])\n plt.ylim(-45, 45)\n # plt.ylabel(\"$y$\")\n plt.yticks([-40, -20, 0, 20, 40], [])\n\n # Now plot the inferred locations\n\n\n plt.subplot(212, aspect='equal')\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2*np.pi))\n plt.plot(Ls_mean[k,0], Ls_mean[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"Mean Locations\")\n plt.xlim(-30, 30)\n plt.xticks([])\n plt.ylim(-30, 30)\n plt.yticks([])\n\n plt.tight_layout()\n plt.savefig(os.path.join(results_dir, \"hipp_mean_locations.pdf\"))\n plt.show()", "metadata": "root.plot_mean_locations", "header": "['module', '___EOS___']", "index": 492 }, { "content": "def plot_mean_and_pca_locations(result):\n ### Plot the sampled locations for a few neurons\n _, _, _, _, Ls = result\n Ls_rot = []\n for L in Ls:\n R = compute_optimal_rotation(L, pfs, scale=False)\n Ls_rot.append(L.dot(R))\n Ls_rot = np.array(Ls_rot)\n Ls_mean = np.mean(Ls_rot, 0)\n\n # Bin the data\n from pyhawkes.utils.utils import convert_continuous_to_discrete\n S_dt = convert_continuous_to_discrete(S, C, 0.25, 0, T)\n\n # Smooth the data to get a firing rate\n from scipy.ndimage.filters import gaussian_filter1d\n S_smooth = np.array([gaussian_filter1d(s, 4) for s in S_dt.T]).T\n\n # Run pca to gte an embedding\n from sklearn.decomposition import PCA\n pca = PCA(n_components=2)\n pca.fit(S_smooth)\n Z = pca.components_.T\n\n # Rotate\n R = compute_optimal_rotation(Z, pfs, scale=False)\n Z = Z.dot(R)\n\n wheel_cmap = gradient_cmap([colors[0], colors[3], colors[2], colors[1], colors[0]])\n fig = create_figure(figsize=(1.4,2.9))\n # plt.subplot(211, aspect='equal')\n ax = create_axis_at_location(fig, .3, 1.7, 1, 1)\n\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2*np.pi))\n plt.plot(Ls_mean[k,0], Ls_mean[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"Mean Locations\")\n plt.xlim(-3, 3)\n plt.xticks([-2, 0, 2])\n plt.ylim(-3, 3)\n plt.yticks([-2, 0, 2])\n\n\n # plt.subplot(212, aspect='equal')\n ax = create_axis_at_location(fig, .3, .2, 1, 1)\n\n for i,k in enumerate(node_perm):\n color = wheel_cmap((np.pi+pfs_th[k])/(2*np.pi))\n plt.plot(Z[k,0], Z[k, 1], 'o',\n markerfacecolor=color, markeredgecolor=color,\n markersize=4 + 4 * pf_size[k],\n alpha=0.7)\n\n # plt.gca().add_patch(Circle((0,0), radius=rad, ec='k', fc=\"none\"))\n plt.title(\"PCA Locations\")\n plt.xlim(-.5, .5)\n # plt.xlabel(\"$x$\")\n plt.xticks([-.4, 0, .4])\n plt.ylim(-.5, .5)\n # plt.ylabel(\"$y$\")\n plt.yticks([-.4, 0, .4])\n\n # plt.tight_layout()\n plt.savefig(os.path.join(results_dir, \"hipp_mean_pca_locations.pdf\"))\n plt.show()", "metadata": "root.plot_mean_and_pca_locations", "header": "['module', '___EOS___']", "index": 548 } ]

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[ { "span": "ax ", "start_line": 344, "start_column": 4, "end_line": 344, "end_column": 6 }, { "span": "plot_mean_locations(", "start_line": 492, "start_column": 4, "end_line": 492, "end_column": 23 }, { "span": "ax ", "start_line": 598, "start_column": 4, "end_line": 598, "end_column": 6 } ]

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Unused import

dcramer/sentry-old/sentry/plugins/sentry_redmine/migrations/0001_initial.py

[ { "content": "# encoding: utf-8\nimport datetime\nfrom south.db import db\nfrom south.v2 import SchemaMigration\nfrom django.db import models\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Migration(SchemaMigration):\n\n\n\n\n\n models = {\n 'sentry.groupedmessage': {\n 'Meta': {'unique_together': \"(('logger', 'view', 'checksum'),)\", 'object_name': 'GroupedMessage'},\n 'checksum': ('django.db.models.fields.CharField', [], {'max_length': '32'}),\n 'class_name': ('django.db.models.fields.CharField', [], {'db_index': 'True', 'max_length': '128', 'null': 'True', 'blank': 'True'}),\n 'data': ('django.db.models.fields.TextField', [], {'null': 'True', 'blank': 'True'}),\n 'first_seen': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now', 'db_index': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'last_seen': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now', 'db_index': 'True'}),\n 'level': ('django.db.models.fields.PositiveIntegerField', [], {'default': '40', 'db_index': 'True', 'blank': 'True'}),\n 'logger': ('django.db.models.fields.CharField', [], {'default': \"'root'\", 'max_length': '64', 'db_index': 'True', 'blank': 'True'}),\n 'message': ('django.db.models.fields.TextField', [], {}),\n 'status': ('django.db.models.fields.PositiveIntegerField', [], {'default': '0', 'db_index': 'True'}),\n 'times_seen': ('django.db.models.fields.PositiveIntegerField', [], {'default': '1'}),\n 'traceback': ('django.db.models.fields.TextField', [], {'null': 'True', 'blank': 'True'}),\n 'view': ('django.db.models.fields.CharField', [], {'max_length': '200', 'null': 'True', 'blank': 'True'})\n },\n 'sentry_redmine.redmineissue': {\n 'Meta': {'object_name': 'RedmineIssue'},\n 'group': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['sentry.GroupedMessage']\"}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'issue_id': ('django.db.models.fields.PositiveIntegerField', [], {})\n }\n }\n\n complete_apps = ['sentry_redmine']", "metadata": "root.Migration", "header": "['module', '___EOS___']", "index": 6 }, { "content": " def forwards(self, orm):\n \n # Adding model 'RedmineIssue'\n db.create_table('sentry_redmine_redmineissue', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('group', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['sentry.GroupedMessage'])),\n ('issue_id', self.gf('django.db.models.fields.PositiveIntegerField')()),\n ))\n db.send_create_signal('sentry_redmine', ['RedmineIssue'])", "metadata": "root.Migration.forwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 8 }, { "content": " def backwards(self, orm):\n \n # Deleting model 'RedmineIssue'\n db.delete_table('sentry_redmine_redmineissue')", "metadata": "root.Migration.backwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 19 } ]

[ { "span": "import datetime", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 15 }, { "span": "from django.db import models", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 28 } ]

[]

1

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Except block handles 'BaseException'

enthought/traits/traits/tests/test_cythonized_traits.py

[ { "content": "def has_no_compiler():\n if no_cython:\n return True\n # Easy way to check if we have access to a compiler\n code = \"return 1+1\"\n try:\n cython.inline(code)\n return False\n except:\n return True", "metadata": "root.has_no_compiler", "header": "['module', '___EOS___']", "index": 22 }, { "content": " @unittest.skipIf(SKIP_TEST, 'Missing Cython and/or compiler')\n def test_on_trait_lambda_failure(self):\n\n # Lambda function are converted like builtins when cythonized which\n # causes the following code to fail\n\n code = \"\"\"\nfrom traits.api import HasTraits, Str, Int, Property\n\ndef Alias(name):\n return Property(\n lambda obj: getattr(obj, name),\n lambda obj, value: setattr(obj, name, value)\n )\n\nclass Test(HasTraits):\n name = Str\n\n funky_name = Alias('name')\n\nreturn Test()\n\"\"\"\n\n try:\n cython.inline(code, get_type=_always_object_type, force=True,\n locals={}, globals={})\n except:\n # We suppose we have an exception. Because of the usage of the\n # skipIf decorator on the test, we can't use an expectedFailure\n # decorator as they don't play well together.\n pass\n else:\n self.fail(\n 'Unexpected results. Cython was not managing lambda as regular'\n ' functions. Behaviour changed ...'\n )", "metadata": "root.CythonizedTraitsTestCase.test_on_trait_lambda_failure", "header": "['class', 'CythonizedTraitsTestCase', '(', 'unittest', '.', 'TestCase', ',', 'UnittestTools', ')', ':', '___EOS___']", "index": 247 } ]

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[]

1

true

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Unused local variable

karesansui/karesansui/bin/delete_export_data.py

[ { "content": " def process(self):\n (opts, args) = getopts()\n chkopts(opts)\n self.up_progress(10)\n\n kvc = KaresansuiVirtConnection()\n # #1 libvirt process\n try:\n #inactive_pool = kvc.list_inactive_storage_pool()\n inactive_pool = []\n active_pool = kvc.list_active_storage_pool()\n pools = inactive_pool + active_pool\n pools.sort()\n\n export = []\n for pool_name in pools:\n pool = kvc.search_kvn_storage_pools(pool_name)\n path = pool[0].get_info()[\"target\"][\"path\"]\n if os.path.exists(path):\n for _afile in glob.glob(\"%s/*/info.dat\" % (path,)):\n e_param = ExportConfigParam()\n e_param.load_xml_config(_afile)\n\n if e_param.get_uuid() != opts.uuid:\n continue\n\n e_name = e_param.get_domain()\n _dir = os.path.dirname(_afile)\n\n param = ConfigParam(e_name)\n\n path = \"%s/%s.xml\" % (_dir, e_name)\n if os.path.isfile(path) is False:\n raise KssCommandException(\n 'Export corrupt data.(file not found) - path=%s' % path)\n\n param.load_xml_config(path)\n\n if e_name != param.get_domain_name():\n raise KssCommandException(\n 'Export corrupt data.(The name does not match) - info=%s, xml=%s' \\\n % (e_name, param.get_name()))\n\n _dir = os.path.dirname(_afile)\n\n export.append({\"dir\" : _dir,\n \"pool\" : pool_name,\n \"uuid\" : e_param.get_uuid(),\n \"name\" : e_name,\n })\n\n if len(export) < 1:\n # refresh pool.\n conn = KaresansuiVirtConnection(readonly=False)\n try:\n conn.refresh_pools()\n finally:\n conn.close()\n raise KssCommandException('libvirt data did not exist. - uuid=%s' % opts.uuid)\n else:\n export = export[0]\n\n finally:\n kvc.close()\n\n self.up_progress(30)\n # #2 physical process\n if os.path.isdir(export['dir']) is False:\n raise KssCommandException(_(\"Failed to delete export data. - %s\") % (_(\"Export data directory not found. [%s]\") % (export['dir'])))\n\n uuid = os.path.basename(export['dir'])\n pool_dir = os.path.dirname(export['dir'])\n\n if not is_uuid(export['uuid']):\n raise KssCommandException(_(\"Failed to delete export data. - %s\") % (_(\"'%s' is not valid export data directory.\") % (export['dir'])))\n\n shutil.rmtree(export['dir'])\n\n for _afile in glob.glob(\"%s*img\" % (export['dir'])):\n os.remove(_afile)\n\n self.up_progress(30)\n # refresh pool.\n conn = KaresansuiVirtConnection(readonly=False)\n try:\n try:\n conn.refresh_pools()\n finally:\n conn.close()\n except:\n pass\n\n self.logger.info('Deleted export data. - uuid=%s' % (opts.uuid))\n print >>sys.stdout, _('Deleted export data. - uuid=%s') % (opts.uuid)\n return True", "metadata": "root.DeleteExportData.process", "header": "['class', 'DeleteExportData', '(', 'KssCommand', ')', ':', '___EOS___']", "index": 69 } ]

[ { "span": "uuid ", "start_line": 139, "start_column": 8, "end_line": 139, "end_column": 12 }, { "span": "pool_dir ", "start_line": 140, "start_column": 8, "end_line": 140, "end_column": 16 } ]

[]

1

true

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Insecure temporary file

babble/babble/include/jython/Lib/test/test_logging.py

[ { "content": "def test4():\n for i in range(4):\n conf = globals()['config%d' % i]\n sys.stdout.write('config%d: ' % i)\n loggerDict = logging.getLogger().manager.loggerDict\n logging._acquireLock()\n try:\n saved_handlers = logging._handlers.copy()\n saved_handler_list = logging._handlerList[:]\n saved_loggers = loggerDict.copy()\n finally:\n logging._releaseLock()\n try:\n fn = tempfile.mktemp(\".ini\")\n f = open(fn, \"w\")\n f.write(conf)\n f.close()\n try:\n logging.config.fileConfig(fn)\n #call again to make sure cleanup is correct\n logging.config.fileConfig(fn)\n except:\n t = sys.exc_info()[0]\n message(str(t))\n else:\n message('ok.')\n os.remove(fn)\n finally:\n logging._acquireLock()\n try:\n logging._handlers.clear()\n logging._handlers.update(saved_handlers)\n logging._handlerList[:] = saved_handler_list\n loggerDict = logging.getLogger().manager.loggerDict\n loggerDict.clear()\n loggerDict.update(saved_loggers)\n finally:\n logging._releaseLock()", "metadata": "root.test4", "header": "['module', '___EOS___']", "index": 471 }, { "content": "def test5():\n loggerDict = logging.getLogger().manager.loggerDict\n logging._acquireLock()\n try:\n saved_handlers = logging._handlers.copy()\n saved_handler_list = logging._handlerList[:]\n saved_loggers = loggerDict.copy()\n finally:\n logging._releaseLock()\n try:\n fn = tempfile.mktemp(\".ini\")\n f = open(fn, \"w\")\n f.write(test5_config)\n f.close()\n logging.config.fileConfig(fn)\n try:\n raise KeyError\n except KeyError:\n logging.exception(\"just testing\")\n os.remove(fn)\n hdlr = logging.getLogger().handlers[0]\n logging.getLogger().handlers.remove(hdlr)\n finally:\n logging._acquireLock()\n try:\n logging._handlers.clear()\n logging._handlers.update(saved_handlers)\n logging._handlerList[:] = saved_handler_list\n loggerDict = logging.getLogger().manager.loggerDict\n loggerDict.clear()\n loggerDict.update(saved_loggers)\n finally:\n logging._releaseLock()", "metadata": "root.test5", "header": "['module', '___EOS___']", "index": 545 } ]

[ { "span": "tempfile.mktemp(\".ini\")", "start_line": 484, "start_column": 17, "end_line": 484, "end_column": 40 }, { "span": "tempfile.mktemp(\".ini\")", "start_line": 555, "start_column": 13, "end_line": 555, "end_column": 36 } ]

[]

1

true

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Unused local variable

IanLewis/django-lifestream/lifestream/rss.py

[ { "content": " def item_categories(self, item):\n def item_categories(self, item):\n if 'tagging' in settings.INSTALLED_APPS:\n return [tag.name for tag in item.tag_set]\n else:\n return []", "metadata": "root.RecentItemsFeed.item_categories", "header": "['class', 'RecentItemsFeed', '(', 'SyndicationFeed', ')', ':', '___EOS___']", "index": 30 } ]

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[]

1

true

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First argument to super() is not enclosing class

python-visualization/folium/folium/plugins/heat_map.py

[ { "content": " def __init__(self, data, name=None, min_opacity=0.5, max_zoom=18,\n max_val=1.0, radius=25, blur=15, gradient=None, overlay=True):\n \"\"\"Create a Heatmap layer\n\n Parameters\n ----------\n data : list of points of the form [lat, lng] or [lat, lng, weight]\n The points you want to plot.\n You can also provide a numpy.array of shape (n,2) or (n,3).\n name : str\n The name of the layer that will be created.\n min_opacity : default 1.\n The minimum opacity the heat will start at.\n max_zoom : default 18\n Zoom level where the points reach maximum intensity (as intensity\n scales with zoom), equals maxZoom of the map by default\n max_val : float, default 1.\n Maximum point intensity\n radius : int, default 25\n Radius of each \"point\" of the heatmap\n blur : int, default 15\n Amount of blur\n gradient : dict, default None\n Color gradient config. e.g. {0.4: 'blue', 0.65: 'lime', 1: 'red'}\n \"\"\"\n super(TileLayer, self).__init__(name=name)\n self._name = 'HeatMap'\n self.tile_name = name if name is not None else self.get_name()\n\n self.data = [[x for x in line] for line in data]\n self.min_opacity = min_opacity\n self.max_zoom = max_zoom\n self.max_val = max_val\n self.radius = radius\n self.blur = blur\n self.gradient = (json.dumps(gradient, sort_keys=True) if\n gradient is not None else \"null\")\n self.overlay = overlay\n\n self._template = Template(u\"\"\"\n {% macro script(this, kwargs) %}\n var {{this.get_name()}} = L.heatLayer(\n {{this.data}},\n {\n minOpacity: {{this.min_opacity}},\n maxZoom: {{this.max_zoom}},\n max: {{this.max_val}},\n radius: {{this.radius}},\n blur: {{this.blur}},\n gradient: {{this.gradient}}\n })\n .addTo({{this._parent.get_name()}});\n {% endmacro %}\n \"\"\")", "metadata": "root.HeatMap.__init__", "header": "['class', 'HeatMap', '(', 'TileLayer', ')', ':', '___EOS___']", "index": 18 }, { "content": " def render(self, **kwargs):\n super(TileLayer, self).render()\n\n figure = self.get_root()\n assert isinstance(figure, Figure), (\"You cannot render this Element \"\n \"if it's not in a Figure.\")\n\n figure.header.add_children(\n JavascriptLink(\"https://leaflet.github.io/Leaflet.heat/dist/leaflet-heat.js\"), # noqa\n name='leaflet-heat.js')", "metadata": "root.HeatMap.render", "header": "['class', 'HeatMap', '(', 'TileLayer', ')', ':', '___EOS___']", "index": 73 } ]

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[]

1

true

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Except block handles 'BaseException'

dtmilano/AndroidViewClient/tests/com/dtmilano/android/uiautomator/uiautomatorhelpertests.py

[ { "content": "#! /usr/bin/env python\nfrom PIL import Image\nimport random\nimport sys\nimport os\nimport time\nimport cStringIO\n\ntry:\n sys.path.insert(0, os.path.join(os.environ['ANDROID_VIEW_CLIENT_HOME'], 'src'))\nexcept:\n pass\n\n\nfrom com.dtmilano.android.viewclient import ViewClient\nfrom com.dtmilano.android.uiautomator.uiautomatorhelper import UiAutomatorHelper\n\n__author__ = 'diego'\n\nimport unittest\n\n\nDEBUG = False\n\n\n\n\nif __name__ == '__main__':\n unittest.main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "except:", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 7 } ]

[]

1

true

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Except block handles 'BaseException'

dimagi/commcare-hq/corehq/apps/style/forms/widgets.py

[ { "content": " def render(self, name, value, attrs=None):\n final_attrs = self.build_attrs(attrs, type='checkbox', name=name)\n try:\n result = self.check_test(value)\n except: # Silently catch exceptions\n result = False\n if result:\n final_attrs['checked'] = 'checked'\n if value not in ('', True, False, None):\n # Only add the 'value' attribute if a value is non-empty.\n final_attrs['value'] = force_unicode(value)\n return mark_safe(u'<label class=\"checkbox\"><input%s /> %s</label>' %\n (flatatt(final_attrs), self.inline_label))", "metadata": "root.BootstrapCheckboxInput.render", "header": "['class', 'BootstrapCheckboxInput', '(', 'CheckboxInput', ')', ':', '___EOS___']", "index": 18 } ]

[ { "span": "except: ", "start_line": 22, "start_column": 8, "end_line": 22, "end_column": 15 } ]

[]

1

true

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[ 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Unused import

rwl/muntjac/muntjac/demo/sampler/features/dragndrop/__init__.py

[ { "content": "\nfrom muntjac.demo.sampler.features.dragndrop.DragDropTreeSorting import DragDropTreeSorting\nfrom muntjac.demo.sampler.features.dragndrop.DragDropHtml5FromDesktop import DragDropHtml5FromDesktop\nfrom muntjac.demo.sampler.features.dragndrop.DragDropTableTree import DragDropTableTree\nfrom muntjac.demo.sampler.features.dragndrop.DragDropServerValidation import DragDropServerValidation\nfrom muntjac.demo.sampler.features.dragndrop.DragDropRearrangeComponents import DragDropRearrangeComponents\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropTreeSorting import DragDropTreeSorting", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 91 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropHtml5FromDesktop import DragDropHtml5FromDesktop", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 101 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropTableTree import DragDropTableTree", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 87 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropServerValidation import DragDropServerValidation", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 101 }, { "span": "from muntjac.demo.sampler.features.dragndrop.DragDropRearrangeComponents import DragDropRearrangeComponents", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 107 } ]

[]

1

false

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[ 4, 4, 4, 4, 4, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 ]

Unused import

amrdraz/kodr/app/brython/www/src/Lib/test/test_xmlrpc_net.py

[ { "content": "#!/usr/bin/env python3\n\nimport collections.abc\nimport errno\nimport socket\nimport sys\nimport unittest\nfrom test import support\n\nimport xmlrpc.client as xmlrpclib\n\n\n\n\nif __name__ == \"__main__\":\n test_main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class CurrentTimeTest(unittest.TestCase):\n\n", "metadata": "root.CurrentTimeTest", "header": "['module', '___EOS___']", "index": 11 }, { "content": " def test_current_time(self):\n # Get the current time from xmlrpc.com. This code exercises\n # the minimal HTTP functionality in xmlrpclib.\n self.skipTest(\"time.xmlrpc.com is unreliable\")\n server = xmlrpclib.ServerProxy(\"http://time.xmlrpc.com/RPC2\")\n try:\n t0 = server.currentTime.getCurrentTime()\n except socket.error as e:\n self.skipTest(\"network error: %s\" % e)\n return\n\n # Perform a minimal sanity check on the result, just to be sure\n # the request means what we think it means.\n t1 = xmlrpclib.DateTime()\n\n dt0 = xmlrpclib._datetime_type(t0.value)\n dt1 = xmlrpclib._datetime_type(t1.value)\n if dt0 > dt1:\n delta = dt0 - dt1\n else:\n delta = dt1 - dt0\n # The difference between the system time here and the system\n # time on the server should not be too big.\n self.assertTrue(delta.days <= 1)", "metadata": "root.CurrentTimeTest.test_current_time", "header": "['class', 'CurrentTimeTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 13 }, { "content": " def test_python_builders(self):\n # Get the list of builders from the XMLRPC buildbot interface at\n # python.org.\n server = xmlrpclib.ServerProxy(\"http://buildbot.python.org/all/xmlrpc/\")\n try:\n builders = server.getAllBuilders()\n except socket.error as e:\n self.skipTest(\"network error: %s\" % e)\n return\n self.addCleanup(lambda: server('close')())\n\n # Perform a minimal sanity check on the result, just to be sure\n # the request means what we think it means.\n self.assertIsInstance(builders, collections.abc.Sequence)\n self.assertTrue([x for x in builders if \"3.x\" in x], builders)", "metadata": "root.CurrentTimeTest.test_python_builders", "header": "['class', 'CurrentTimeTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 38 }, { "content": "def test_main():\n support.requires(\"network\")\n support.run_unittest(CurrentTimeTest)", "metadata": "root.test_main", "header": "['module', '___EOS___']", "index": 55 } ]

[ { "span": "import errno", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 12 }, { "span": "import sys", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 10 } ]

[]

1

false

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Unused local variable

hyperopt/hyperopt/hyperopt/pyll/base.py

[ { "content": " @property\n def arg(self):\n # XXX: move this introspection to __init__, and change\n # the basic data-structure to not use pos_args and named_args.\n # XXX: think though... we want the binding to be updated if pos_args\n # and named_args is modified... so maybe this is an ok way to do it?\n #\n # XXX: extend something to deal with Lambda objects instead of\n # decorated python functions.\n #\n # http://docs.python.org/reference/expressions.html#calls\n #\n binding = {}\n\n fn = scope._impls[self.name]\n # XXX does not work for builtin functions\n defaults = fn.__defaults__ # right-aligned default values for params\n code = fn.__code__\n\n extra_args_ok = bool(code.co_flags & 0x04)\n extra_kwargs_ok = bool(code.co_flags & 0x08)\n\n # -- assert that my understanding of calling protocol is correct\n try:\n if extra_args_ok and extra_kwargs_ok:\n assert len(code.co_varnames) >= code.co_argcount + 2\n param_names = code.co_varnames[:code.co_argcount + 2]\n args_param = param_names[code.co_argcount]\n kwargs_param = param_names[code.co_argcount + 1]\n pos_params = param_names[:code.co_argcount]\n elif extra_kwargs_ok:\n assert len(code.co_varnames) >= code.co_argcount + 1\n param_names = code.co_varnames[:code.co_argcount + 1]\n kwargs_param = param_names[code.co_argcount]\n pos_params = param_names[:code.co_argcount]\n elif extra_args_ok:\n assert len(code.co_varnames) >= code.co_argcount + 1\n param_names = code.co_varnames[:code.co_argcount + 1]\n args_param = param_names[code.co_argcount]\n pos_params = param_names[:code.co_argcount]\n else:\n assert len(code.co_varnames) >= code.co_argcount\n param_names = code.co_varnames[:code.co_argcount]\n pos_params = param_names[:code.co_argcount]\n except AssertionError:\n print 'YIKES: MISUNDERSTANDING OF CALL PROTOCOL:',\n print code.co_argcount,\n print code.co_varnames,\n print '%x' % code.co_flags\n raise\n\n if extra_args_ok:\n binding[args_param] == []\n\n if extra_kwargs_ok:\n binding[kwargs_param] == {}\n\n if len(self.pos_args) > code.co_argcount and not extra_args_ok:\n raise TypeError('Argument count exceeds number of positional params')\n\n # -- bind positional arguments\n for param_i, arg_i in zip(param_names, self.pos_args):\n binding[param_i] = arg_i\n\n if extra_args_ok:\n # XXX: THIS IS NOT BEING TESTED AND IS OBVIOUSLY BROKEN\n binding[args_param].extend(args[code.co_argcount:])\n\n # -- bind keyword arguments\n for aname, aval in self.named_args:\n try:\n pos = pos_params.index(aname)\n except ValueError:\n if extra_kwargs_ok:\n binding[kwargs_param][aname] = aval\n continue\n else:\n raise TypeError('Unrecognized keyword argument', aname)\n param = param_names[pos]\n if param in binding:\n raise TypeError('Duplicate argument for parameter', param)\n binding[param] = aval\n\n assert len(binding) <= len(param_names)\n\n if len(binding) < len(param_names):\n for p in param_names:\n if p not in binding:\n binding[p] = MissingArgument\n\n return binding", "metadata": "root.Apply.arg", "header": "['class', 'Apply', '(', 'object', ')', ':', '___EOS___']", "index": 305 } ]

[ { "span": "defaults ", "start_line": 321, "start_column": 8, "end_line": 321, "end_column": 16 } ]

[]

1

true

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Imprecise assert

goshippo/shippo-python-client/shippo/test/test_rate.py

[ { "content": " def test_list_all(self):\n rate_list = shippo.Rate.all()\n self.assertTrue('count' in rate_list)\n self.assertTrue('results' in rate_list)", "metadata": "root.RateTests.test_list_all", "header": "['class', 'RateTests', '(', 'ShippoTestCase', ')', ':', '___EOS___']", "index": 45 } ]

[ { "span": "self.assertTrue('count' in rate_list)", "start_line": 47, "start_column": 8, "end_line": 47, "end_column": 45 }, { "span": "self.assertTrue('results' in rate_list)", "start_line": 48, "start_column": 8, "end_line": 48, "end_column": 47 } ]

[]

1

true

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Unused import

aliles/begins/tests/test_formatters.py

[ { "content": "from __future__ import absolute_import, division, print_function\nimport argparse\nimport mock\nimport sys\n\ntry:\n import unittest2 as unittest\nexcept ImportError:\n import unittest\n\nfrom begin import formatters\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class TestCompose(unittest.TestCase):\n\n\n\n\n\n\n\n\n", "metadata": "root.TestCompose", "header": "['module', '___EOS___']", "index": 13 }, { "content": " def make_parser(self, formatter_class):\n parser = argparse.ArgumentParser(description='A test parser',\n formatter_class=formatter_class)\n parser.add_argument('test', help='Test argument')\n subparsers = parser.add_subparsers(title='Available subcommands')\n subparser = subparsers.add_parser('command', help='Test Subcommand',\n formatter_class=formatter_class)\n subparser.add_argument('test', help='Test argument')\n return parser", "metadata": "root.TestCompose.make_parser", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 15 }, { "content": " def test_zero_mixins(self):\n formatter_class = formatters.compose()", "metadata": "root.TestCompose.test_zero_mixins", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 25 }, { "content": " def test_all_mixins(self):\n formatter_class = formatters.compose(\n formatters.RawArguments,\n formatters.RawDescription,\n formatters.ArgumentDefaults,\n formatters.RemoveSubcommandsLine)", "metadata": "root.TestCompose.test_all_mixins", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 28 }, { "content": " def test_with_name(self):\n name = '__HelpFormatterForTesting'\n formatter_class = formatters.compose(formatters.RawDescription,\n name=name)\n self.assertEqual(formatter_class.__name__, name)", "metadata": "root.TestCompose.test_with_name", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 35 }, { "content": " def test_invalid_keyword(self):\n with self.assertRaises(TypeError):\n formatters.compose(invalid=None)", "metadata": "root.TestCompose.test_invalid_keyword", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 41 }, { "content": " def test_raw_argument(self):\n formatter_class = formatters.compose(formatters.RawArguments)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_raw_argument", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 45 }, { "content": " def test_raw_description(self):\n formatter_class = formatters.compose(formatters.RawDescription)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_raw_description", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 50 }, { "content": " def test_argument_defaults(self):\n formatter_class = formatters.compose(formatters.ArgumentDefaults)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_argument_defaults", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 55 }, { "content": " def test_remove_subcommands_line(self):\n formatter_class = formatters.compose(formatters.RemoveSubcommandsLine)\n parser = self.make_parser(formatter_class)\n clihelp = parser.format_help()", "metadata": "root.TestCompose.test_remove_subcommands_line", "header": "['class', 'TestCompose', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 60 } ]

[ { "span": "import mock", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 11 }, { "span": "import sys", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 10 } ]

[]

1

false

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Imprecise assert

bokeh/bokeh/bokeh/tests/test_themes.py

[ { "content": " def test_construct_no_json_or_filename(self):\n with self.assertRaises(ValueError) as manager:\n Theme()\n self.assertTrue(\"requires json or a filename\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_no_json_or_filename", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 34 }, { "content": " def test_construct_json_and_filename(self):\n with self.assertRaises(ValueError) as manager:\n # we check \"\" and {} as falsey values, to try to trick\n # our code into thinking they weren't provided.\n Theme(filename=\"\", json={})\n self.assertTrue(\"not both\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_json_and_filename", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 39 }, { "content": " def test_construct_bad_attrs(self):\n with self.assertRaises(ValueError) as manager:\n Theme(json=dict(attrs=42))\n self.assertTrue(\"should be a dictionary of class names\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_bad_attrs", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 46 }, { "content": " def test_construct_bad_class_props(self):\n with self.assertRaises(ValueError) as manager:\n Theme(json=dict(attrs=dict(SomeClass=42)))\n self.assertTrue(\"should be a dictionary of properties\" in repr(manager.exception))", "metadata": "root.TestThemes.test_construct_bad_class_props", "header": "['class', 'TestThemes', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 51 } ]

[ { "span": "self.assertTrue(\"requires json or a filename\" in repr(manager.exception))", "start_line": 37, "start_column": 8, "end_line": 37, "end_column": 81 }, { "span": "self.assertTrue(\"not both\" in repr(manager.exception))", "start_line": 44, "start_column": 8, "end_line": 44, "end_column": 62 }, { "span": "self.assertTrue(\"should be a dictionary of class names\" in repr(manager.exception))", "start_line": 49, "start_column": 8, "end_line": 49, "end_column": 91 }, { "span": "self.assertTrue(\"should be a dictionary of properties\" in repr(manager.exception))", "start_line": 54, "start_column": 8, "end_line": 54, "end_column": 90 } ]

[]

1

true

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Unused import

comodit/demos/openshift/helper.py

[ { "content": "import time, sys, os, config, string, random\n\nfrom comodit_client.api.exceptions import PythonApiException\nfrom comodit_client.rest.exceptions import ApiException\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def create_host(env, name, platform, distribution, applications = []):\n host = env.hosts().create(name, \"\", platform['name'], distribution['name'])\n\n # Configure platform\n context = host.get_platform()\n for key, value in platform['settings'].iteritems():\n context.settings().create(key, value)\n\n # Configure distribution\n context = host.get_distribution()\n for key, value in distribution['settings'].iteritems():\n context.settings().create(key, value)\n\n # Install applications\n for app in applications:\n host.install(app['name'], app['settings'])\n\n return host", "metadata": "root.create_host", "header": "['module', '___EOS___']", "index": 5 }, { "content": "def get_short_hostname(hostname):\n parts = hostname.split('.')\n return parts[0]", "metadata": "root.get_short_hostname", "header": "['module', '___EOS___']", "index": 24 }, { "content": "def get_latest_id(prefix, env):\n names = env.hosts_f\n last_id = -1\n for name in names:\n if name.startswith(prefix):\n i = int(name[len(prefix):].rstrip())\n if i > last_id:\n last_id = i\n return last_id", "metadata": "root.get_latest_id", "header": "['module', '___EOS___']", "index": 28 }, { "content": "def generate_id(size=6, chars=string.ascii_uppercase + string.digits):\n return ''.join(random.choice(chars) for x in range(size))", "metadata": "root.generate_id", "header": "['module', '___EOS___']", "index": 38 }, { "content": "def track_changes(host):\n changes = host.changes().list()\n c = changes[-1]\n current_task = -1\n done = False\n while not done:\n for t in c.tasks:\n # Skip already processed tasks\n if t.order_num < current_task:\n continue\n\n # If the current task\n if t.order_num == current_task:\n if t.status == \"OK\":\n print \" [OK]\"\n if current_task == len(c.tasks) -1:\n done = True\n continue\n elif t.status == \"ERROR\":\n print \" [ERROR](%s...)\" % t.error[:80]\n if current_task == len(c.tasks) -1:\n done = True\n continue\n if t.status == \"PENDING\":\n break\n \n # Moved to a new task\n current_task = t.order_num\n sys.stdout.write(\" - %s...\" % t.description)\n sys.stdout.flush()\n break\n\n # Otherwise we wait, refresh, and loop\n time.sleep(1)\n c.refresh()", "metadata": "root.track_changes", "header": "['module', '___EOS___']", "index": 41 } ]

[ { "span": "import time, sys, os, config, string, random", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 44 }, { "span": "from comodit_client.api.exceptions import PythonApiException", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 60 }, { "span": "from comodit_client.rest.exceptions import ApiException", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 55 } ]

[]

1

false

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Imprecise assert

ASPP/pelita/test/test_game_master.py

[ { "content": " def test_win_on_timeout_team_0(self):\n test_start = (\n \"\"\" ######\n #0 ..#\n #.. 1#\n ###### \"\"\")\n # the game lasts two rounds, enough time for bot 1 to eat food\n NUM_ROUNDS = 2\n # bot 1 moves east twice to eat the single food\n teams = [\n SimpleTeam(TestPlayer('>>')),\n SimpleTeam(StoppingPlayer())\n ]\n gm = GameMaster(test_start, teams, 2, game_time=NUM_ROUNDS)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 0)\n self.assertEqual(gm.game_state[\"round_index\"], NUM_ROUNDS)", "metadata": "root.TestGame.test_win_on_timeout_team_0", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 540 }, { "content": " def test_win_on_timeout_team_1(self):\n test_start = (\n \"\"\" ######\n #0 ..#\n #.. 1#\n ###### \"\"\")\n # the game lasts two rounds, enough time for bot 1 to eat food\n NUM_ROUNDS = 2\n\n teams = [\n SimpleTeam(StoppingPlayer()),\n SimpleTeam(TestPlayer('<<')) # bot 1 moves west twice to eat the single food\n ]\n gm = GameMaster(test_start, teams, 2, game_time=NUM_ROUNDS)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)\n self.assertEqual(gm.game_state[\"round_index\"], NUM_ROUNDS)", "metadata": "root.TestGame.test_win_on_timeout_team_1", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 573 }, { "content": " def test_win_on_eating_all(self):\n test_start = (\n \"\"\" ######\n #0 . #\n # . 1#\n ###### \"\"\"\n )\n teams = [\n SimpleTeam(StoppingPlayer()),\n SimpleTeam(TestPlayer('<<<'))\n ]\n # bot 1 eats all the food and the game stops\n gm = GameMaster(test_start, teams, 2, 100)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)\n self.assertEqual(tv.cache[-1][\"round_index\"], 1)\n self.assertEqual(gm.game_state[\"round_index\"], 1)", "metadata": "root.TestGame.test_win_on_eating_all", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 635 }, { "content": " def test_lose_on_eating_all(self):\n test_start = (\n \"\"\" ######\n #0 . #\n # . 1#\n ###### \"\"\"\n )\n teams = [\n SimpleTeam(StoppingPlayer()),\n SimpleTeam(TestPlayer('<<<'))\n ]\n # bot 1 eats all the food and the game stops\n gm = GameMaster(test_start, teams, 2, 100)\n gm.universe.teams[0].score = 2\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n gm.play()\n\n # check\n self.assertEqual(tv.cache[-1][\"round_index\"], 1)\n self.assertEqual(gm.universe.teams[0].score, 2)\n self.assertEqual(gm.universe.teams[1].score, 1)\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 0)\n self.assertEqual(gm.game_state[\"round_index\"], 1)", "metadata": "root.TestGame.test_lose_on_eating_all", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 668 }, { "content": " def test_lose_5_timeouts(self):\n # 0 must move back and forth because of random steps\n test_start = (\n \"\"\" ######\n #0 #.#\n ### #\n ##. 1#\n ###### \"\"\"\n )\n # players do nothing\n class TimeOutPlayer(AbstractPlayer):\n def get_move(self):\n raise PlayerTimeout\n\n teams = [\n SimpleTeam(TimeOutPlayer()),\n SimpleTeam(StoppingPlayer())\n ]\n # the game lasts one round, and then draws\n gm = GameMaster(test_start, teams, 2, 100, max_timeouts=5)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n\n self.assertEqual(gm.universe.bots[0].current_pos, (1,1))\n\n gm.play()\n\n # check\n self.assertEqual(gm.game_state[\"max_timeouts\"], 5)\n self.assertEqual(tv.cache[-1][\"round_index\"], gm.game_state[\"max_timeouts\"] - 1)\n self.assertEqual(gm.universe.teams[0].score, 0)\n self.assertEqual(gm.universe.teams[1].score, 0)\n # the bot moves four times, so after the fourth time,\n # it is back on its original position\n self.assertEqual(gm.universe.bots[0].current_pos, (1,1))\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)", "metadata": "root.TestGame.test_lose_5_timeouts", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 704 }, { "content": " def test_must_not_move_after_last_timeout(self):\n # 0 must move back and forth because of random steps\n # but due to its last timeout, it should be disqualified\n # immediately\n test_start = (\n \"\"\" ######\n ##0.##\n # ## #\n ##. 1#\n ###### \"\"\"\n )\n # players do nothing\n class TimeOutPlayer(AbstractPlayer):\n def get_move(self):\n raise PlayerTimeout\n\n class CheckTestPlayer(AbstractPlayer):\n def get_move(self):\n raise RuntimeError(\"This should never be called\")\n\n teams = [\n SimpleTeam(TimeOutPlayer()),\n SimpleTeam(CheckTestPlayer())\n ]\n # the game lasts one round, and then draws\n gm = GameMaster(test_start, teams, 2, 100, max_timeouts=1)\n\n # this test viewer caches all events lists seen through observe\n class TestViewer(AbstractViewer):\n def __init__(self):\n self.cache = list()\n def observe(self, universe, game_state):\n self.cache.append(game_state)\n\n # run the game\n tv = TestViewer()\n gm.register_viewer(tv)\n gm.set_initial()\n\n gm.play()\n print(gm.universe.pretty)\n print(gm.game_state)\n\n # check\n self.assertEqual(gm.game_state[\"max_timeouts\"], 1)\n self.assertEqual(tv.cache[-1][\"round_index\"], gm.game_state[\"max_timeouts\"] - 1)\n self.assertEqual(gm.universe.teams[0].score, 0)\n self.assertEqual(gm.universe.teams[1].score, 0)\n self.assertEqual(gm.universe.bots[0].current_pos, (2,1))\n self.assertTrue(tv.cache[-1][\"team_wins\"] is not None)\n self.assertEqual(tv.cache[-1][\"team_wins\"], 1)\n\n # the game ends in round 0 with bot_id 0\n self.assertEqual(gm.game_state[\"round_index\"], 0)\n self.assertEqual(gm.game_state[\"bot_id\"], 0)", "metadata": "root.TestGame.test_must_not_move_after_last_timeout", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 752 }, { "content": " def test_play_step(self):\n\n test_start = (\n \"\"\" ########\n # 0 ..#\n #.. 1 #\n ######## \"\"\")\n\n number_bots = 2\n\n\n teams = [\n SimpleTeam(TestPlayer('>>>>')),\n SimpleTeam(TestPlayer('<<<<'))\n ]\n gm = GameMaster(test_start, teams, number_bots, 4)\n\n gm.set_initial()\n\n gm.play_round()\n self.assertEqual(gm.universe.bots[0].current_pos, (3,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (4,2))\n self.assertEqual(gm.game_state[\"round_index\"], 0)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertFalse(gm.game_state[\"finished\"])\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (4,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (4,2))\n self.assertEqual(gm.game_state[\"round_index\"], 1)\n self.assertEqual(gm.game_state[\"bot_id\"], 0)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (4,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (3,2))\n self.assertEqual(gm.game_state[\"round_index\"], 1)\n self.assertEqual(gm.game_state[\"bot_id\"], 1)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (5,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (3,2))\n self.assertEqual(gm.game_state[\"round_index\"], 2)\n self.assertEqual(gm.game_state[\"bot_id\"], 0)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_step()\n self.assertEqual(gm.universe.bots[0].current_pos, (5,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (2,2))\n self.assertEqual(gm.game_state[\"round_index\"], 2)\n self.assertEqual(gm.game_state[\"bot_id\"], 1)\n self.assertEqual(gm.game_state[\"finished\"], False)\n\n gm.play_round()\n # first call tries to finish current round (which already is finished)\n # so nothing happens\n self.assertEqual(gm.universe.bots[0].current_pos, (5,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (2,2))\n self.assertEqual(gm.game_state[\"round_index\"], 2)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], False)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], None)\n\n gm.play_round()\n # second call works\n self.assertEqual(gm.universe.bots[0].current_pos, (6,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (1,2))\n self.assertEqual(gm.game_state[\"round_index\"], 3)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], True)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], True)\n\n # Game finished because all food was eaten\n # team 0 finished first but the round was played regularly to the end\n # (hence round_index == 3 and bot_id is None)\n\n # nothing happens anymore\n gm.play_round()\n self.assertEqual(gm.universe.bots[0].current_pos, (6,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (1,2))\n self.assertEqual(gm.game_state[\"round_index\"], 3)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], True)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], True)\n\n # nothing happens anymore\n gm.play_round()\n self.assertEqual(gm.universe.bots[0].current_pos, (6,1))\n self.assertEqual(gm.universe.bots[1].current_pos, (1,2))\n self.assertEqual(gm.game_state[\"round_index\"], 3)\n self.assertTrue(gm.game_state[\"bot_id\"] is None)\n self.assertEqual(gm.game_state[\"finished\"], True)\n self.assertEqual(gm.game_state[\"team_wins\"], None)\n self.assertEqual(gm.game_state[\"game_draw\"], True)", "metadata": "root.TestGame.test_play_step", "header": "['class', 'TestGame', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 809 } ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 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Unused local variable

CGATOxford/cgat/scripts/bam2geneprofile.py

[ { "content": "def main(argv=None):\n \"\"\"script main.\n\n parses command line options in sys.argv, unless *argv* is given.\n \"\"\"\n\n if not argv:\n argv = sys.argv\n\n # setup command line parser\n parser = E.OptionParser(version=\"%prog version: $Id$\",\n usage=globals()[\"__doc__\"])\n\n parser.add_option(\"-m\", \"--method\", dest=\"methods\", type=\"choice\",\n action=\"append\",\n choices=(\"geneprofile\", \"tssprofile\", \"utrprofile\",\n \"intervalprofile\", \"midpointprofile\",\n \"geneprofilewithintrons\",\n \"geneprofileabsolutedistancefromthreeprimeend\",\n \"separateexonprofile\",\n \"separateexonprofilewithintrons\",\n ),\n help='counters to use. Counters describe the '\n 'meta-gene structure to use. '\n 'Note using geneprofilewithintrons, or '\n 'geneprofileabsolutedistancefromthreeprimeend will '\n 'automatically turn on the --use-base-accuracy option'\n '[%default].')\n\n parser.add_option(\"-b\", \"--bam-file\", \"--bedfile\", \"--bigwigfile\",\n dest=\"infiles\",\n metavar=\"BAM\",\n type=\"string\", action=\"append\",\n help=\"BAM/bed/bigwig files to use. Do not mix \"\n \"different types [%default]\")\n\n parser.add_option(\"-c\", \"--control-bam-file\", dest=\"controlfiles\",\n metavar=\"BAM\",\n type=\"string\", action=\"append\",\n help=\"control/input to use. Should be of the same \"\n \"type as the bam/bed/bigwig file\"\n \" [%default]\")\n\n parser.add_option(\"-g\", \"--gtf-file\", dest=\"gtffile\", type=\"string\",\n metavar=\"GTF\",\n help=\"GTF file to use. \"\n \"[%default]\")\n\n parser.add_option(\n \"--normalize-transcript\",\n dest=\"transcript_normalization\",\n type=\"choice\",\n choices=(\"none\", \"max\", \"sum\", \"total-max\", \"total-sum\"),\n help=\"normalization to apply on each transcript \"\n \"profile before adding to meta-gene profile. \"\n \"[%default]\")\n\n parser.add_option(\n \"--normalize-profile\",\n dest=\"profile_normalizations\",\n type=\"choice\", action=\"append\",\n choices=(\"all\", \"none\", \"area\", \"counts\", \"background\"),\n help=\"normalization to apply on meta-gene \"\n \"profile normalization. \"\n \"[%default]\")\n\n parser.add_option(\n \"-r\", \"--reporter\", dest=\"reporter\", type=\"choice\",\n choices=(\"gene\", \"transcript\"),\n help=\"report results for genes or transcripts.\"\n \" When 'genes` is chosen, exons across all transcripts for\"\n \" a gene are merged. When 'transcript' is chosen, counts are\"\n \" computed for each transcript separately with each transcript\"\n \" contributing equally to the meta-gene profile.\"\n \" [%default]\")\n\n parser.add_option(\"-i\", \"--shift-size\", dest=\"shifts\", type=\"int\",\n action=\"append\",\n help=\"shift reads in :term:`bam` formatted file \"\n \"before computing densities (ChIP-Seq). \"\n \"[%default]\")\n\n parser.add_option(\"-a\", \"--merge-pairs\", dest=\"merge_pairs\",\n action=\"store_true\",\n help=\"merge pairs in :term:`bam` formatted \"\n \"file before computing \"\n \"densities (ChIP-Seq). \"\n \"[%default]\")\n\n parser.add_option(\"-u\", \"--use-base-accuracy\", dest=\"base_accuracy\",\n action=\"store_true\",\n help=\"compute densities with base accuracy. The default \"\n \"is to only use the start and end of the aligned region \"\n \"(RNA-Seq) \"\n \"[%default]\")\n\n parser.add_option(\"-e\", \"--extend\", dest=\"extends\", type=\"int\",\n action=\"append\",\n help=\"extend reads in :term:`bam` formatted file \"\n \"(ChIP-Seq). \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-upstream\", dest=\"resolution_upstream\",\n type=\"int\",\n help=\"resolution of upstream region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-downstream\", dest=\"resolution_downstream\",\n type=\"int\",\n help=\"resolution of downstream region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-upstream-utr\",\n dest=\"resolution_upstream_utr\",\n type=\"int\",\n help=\"resolution of upstream UTR region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-downstream-utr\",\n dest=\"resolution_downstream_utr\",\n type=\"int\",\n help=\"resolution of downstream UTR region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-cds\", dest=\"resolution_cds\", type=\"int\",\n help=\"resolution of cds region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-first-exon\", dest=\"resolution_first\",\n type=\"int\",\n help=\"resolution of first exon in gene, in bp\"\n \"[%default]\")\n\n parser.add_option(\"--resolution-last-exon\", dest=\"resolution_last\",\n type=\"int\",\n help=\"resolution of last exon in gene, in bp\"\n \"[%default]\")\n\n parser.add_option(\"--resolution-introns\",\n dest=\"resolution_introns\", type=\"int\",\n help=\"resolution of introns region in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-exons-absolute-distance-topolya\",\n dest=\"resolution_exons_absolute_distance_topolya\",\n type=\"int\",\n help=\"resolution of exons absolute distance \"\n \"topolya in bp \"\n \"[%default]\")\n\n parser.add_option(\"--resolution-introns-absolute-distance-topolya\",\n dest=\"resolution_introns_absolute_distance_topolya\",\n type=\"int\",\n help=\"resolution of introns absolute distance \"\n \"topolya in bp \"\n \"[%default]\")\n\n parser.add_option(\"--extension-exons-absolute-distance-topolya\",\n dest=\"extension_exons_absolute_distance_topolya\",\n type=\"int\",\n help=\"extension for exons from the absolute \"\n \"distance from the topolya in bp \"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-introns-absolute-distance-topolya\",\n dest=\"extension_introns_absolute_distance_topolya\", type=\"int\",\n help=\"extension for introns from the absolute distance from \"\n \"the topolya in bp [%default]\")\n\n parser.add_option(\n \"--extension-upstream\", dest=\"extension_upstream\", type=\"int\",\n help=\"extension upstream from the first exon in bp\"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-downstream\", dest=\"extension_downstream\", type=\"int\",\n help=\"extension downstream from the last exon in bp\"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-inward\", dest=\"extension_inward\", type=\"int\",\n help=\"extension inward from a TSS start site in bp\"\n \"[%default]\")\n\n parser.add_option(\n \"--extension-outward\", dest=\"extension_outward\", type=\"int\",\n help=\"extension outward from a TSS start site in bp\"\n \"[%default]\")\n\n parser.add_option(\"--scale-flank-length\", dest=\"scale_flanks\", type=\"int\",\n help=\"scale flanks to (integer multiples of) gene length\"\n \"[%default]\")\n\n parser.add_option(\n \"--control-factor\", dest=\"control_factor\", type=\"float\",\n help=\"factor for normalizing control and foreground data. \"\n \"Computed from data if not set. \"\n \"[%default]\")\n\n parser.add_option(\"--output-all-profiles\", dest=\"output_all_profiles\",\n action=\"store_true\",\n help=\"keep individual profiles for each \"\n \"transcript and output. \"\n \"[%default]\")\n\n parser.add_option(\"--counts-tsv-file\", dest=\"input_filename_counts\",\n type=\"string\",\n help=\"filename with count data for each transcript. \"\n \"Use this instead \"\n \"of recomputing the profile. Useful for plotting the \"\n \"meta-gene profile \"\n \"from previously computed counts \"\n \"[%default]\")\n\n parser.add_option(\n \"--background-region-bins\",\n dest=\"background_region_bins\",\n type=\"int\",\n help=\"number of bins on either end of the profile \"\n \"to be considered for background meta-gene normalization \"\n \"[%default]\")\n\n parser.set_defaults(\n remove_rna=False,\n ignore_pairs=False,\n force_output=False,\n bin_size=10,\n extends=[],\n shifts=[],\n sort=[],\n reporter=\"transcript\",\n resolution_cds=1000,\n resolution_introns=1000,\n # 3kb is a good balance of seeing long enough 3 prime bias and not omit\n # too many genes. Tim 31th Aug 2013\n resolution_exons_absolute_distance_topolya=3000,\n # introns is only for assess the noise level, thus do ont need a long\n # region, a long region has the side effect of omit more genes. Tim\n # 31th Aug 2013\n resolution_introns_absolute_distance_topolya=500,\n # extension can simply just be the same as resolution\n extension_exons_absolute_distance_topolya=3000,\n extension_introns_absolute_distance_topolya=500,\n resolution_upstream_utr=1000,\n resolution_downstream_utr=1000,\n resolution_upstream=1000,\n resolution_downstream=1000,\n resolution_first=1000,\n resolution_last=1000,\n # mean length of transcripts: about 2.5 kb\n extension_upstream=2500,\n extension_downstream=2500,\n extension_inward=3000,\n extension_outward=3000,\n plot=True,\n methods=[],\n infiles=[],\n controlfiles=[],\n gtffile=None,\n profile_normalizations=[],\n transcript_normalization=None,\n scale_flanks=0,\n merge_pairs=False,\n min_insert_size=0,\n max_insert_size=1000,\n base_accuracy=False,\n matrix_format=\"single\",\n control_factor=None,\n output_all_profiles=False,\n background_region_bins=10,\n input_filename_counts=None,\n )\n\n # add common options (-h/--help, ...) and parse command line\n (options, args) = E.Start(parser, argv=argv, add_output_options=True)\n\n # Keep for backwards compatability\n if len(args) == 2:\n infile, gtf = args\n options.infiles.append(infile)\n options.gtffile = gtf\n\n if not options.gtffile:\n raise ValueError(\"no GTF file specified\")\n\n if options.gtffile == \"-\":\n options.gtffile = options.stdin\n else:\n options.gtffile = IOTools.openFile(options.gtffile)\n\n if len(options.infiles) == 0:\n raise ValueError(\"no bam/wig/bed files specified\")\n\n for methodsRequiresBaseAccuracy in [\n \"geneprofilewithintrons\",\n \"geneprofileabsolutedistancefromthreeprimeend\",\n ]:\n # If you implemented any methods that you do not want the\n # spliced out introns or exons appear to be covered by\n # non-existent reads, it is better you let those methods imply\n # --base-accurarcy by add them here.\n if methodsRequiresBaseAccuracy in options.methods:\n options.base_accuracy = True\n\n if options.reporter == \"gene\":\n gtf_iterator = GTF.flat_gene_iterator(GTF.iterator(options.gtffile))\n elif options.reporter == \"transcript\":\n gtf_iterator = GTF.transcript_iterator(GTF.iterator(options.gtffile))\n\n # Select rangecounter based on file type\n if len(options.infiles) > 0:\n if options.infiles[0].endswith(\".bam\"):\n bamfiles = [pysam.Samfile(x, \"rb\") for x in options.infiles]\n\n if options.controlfiles:\n controlfiles = [pysam.Samfile(x, \"rb\")\n for x in options.controlfiles]\n else:\n controlfiles = None\n\n format = \"bam\"\n if options.merge_pairs:\n range_counter = _bam2geneprofile.RangeCounterBAM(\n bamfiles,\n shifts=options.shifts,\n extends=options.extends,\n merge_pairs=options.merge_pairs,\n min_insert_size=options.min_insert_size,\n max_insert_size=options.max_insert_size,\n controfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.shifts or options.extends:\n range_counter = _bam2geneprofile.RangeCounterBAM(\n bamfiles,\n shifts=options.shifts,\n extends=options.extends,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.base_accuracy:\n range_counter = _bam2geneprofile.RangeCounterBAMBaseAccuracy(\n bamfiles,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n else:\n range_counter = _bam2geneprofile.RangeCounterBAM(\n bamfiles,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.infiles[0].endswith(\".bed.gz\"):\n bedfiles = [pysam.Tabixfile(x) for x in options.infiles]\n\n if options.controlfiles:\n controlfiles = [pysam.Tabixfile(x)\n for x in options.controlfiles]\n else:\n controlfiles = None\n\n range_counter = _bam2geneprofile.RangeCounterBed(\n bedfiles,\n controlfiles=controlfiles,\n control_factor=options.control_factor)\n\n elif options.infiles[0].endswith(\".bw\"):\n wigfiles = [BigWigFile(file=open(x)) for x in options.infiles]\n range_counter = _bam2geneprofile.RangeCounterBigWig(wigfiles)\n\n else:\n raise NotImplementedError(\n \"can't determine file type for %s\" % str(options.infiles))\n\n counters = []\n for method in options.methods:\n if method == \"utrprofile\":\n counters.append(_bam2geneprofile.UTRCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_upstream_utr,\n options.resolution_cds,\n options.resolution_downstream_utr,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream,\n ))\n\n elif method == \"geneprofile\":\n counters.append(_bam2geneprofile.GeneCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_cds,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream,\n options.scale_flanks))\n\n elif method == \"geneprofilewithintrons\":\n counters.append(_bam2geneprofile.GeneCounterWithIntrons(\n range_counter,\n options.resolution_upstream,\n options.resolution_cds,\n options.resolution_introns,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream,\n options.scale_flanks))\n\n elif method == \"geneprofileabsolutedistancefromthreeprimeend\":\n # options.extension_exons_absolute_distance_tostartsite,\n # options.extension_introns_absolute_distance_tostartsite,\n # Tim 31th Aug 2013: a possible feature for future, if five prime\n # bias is of your interest.\n # (you need to create another class). It is not very difficult to\n # derive from this class, but is not implemented yet\n # This future feature is slightly different the TSS profile\n # already implemented, because in this future feature introns are\n # skipped,\n counters.append(\n _bam2geneprofile.GeneCounterAbsoluteDistanceFromThreePrimeEnd(\n range_counter, options.resolution_upstream,\n options.resolution_downstream,\n options.resolution_exons_absolute_distance_topolya,\n options.resolution_introns_absolute_distance_topolya,\n options.extension_upstream,\n options.extension_downstream,\n options.extension_exons_absolute_distance_topolya,\n options.extension_introns_absolute_distance_topolya,\n options.scale_flanks))\n\n elif method == \"tssprofile\":\n counters.append(_bam2geneprofile.TSSCounter(\n range_counter,\n options.extension_outward,\n options.extension_inward))\n\n elif method == \"intervalprofile\":\n counters.append(_bam2geneprofile.RegionCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_cds,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n elif method == \"midpointprofile\":\n counters.append(_bam2geneprofile.MidpointCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n # add new method to split 1st and last exons out\n # requires a representative transcript for reach gene\n # gtf should be sorted gene-position\n elif method == \"separateexonprofile\":\n counters.append(_bam2geneprofile.SeparateExonCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_first,\n options.resolution_last,\n options.resolution_cds,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n elif method == \"separateexonprofilewithintrons\":\n counters.append(_bam2geneprofile.SeparateExonWithIntronCounter(\n range_counter,\n options.resolution_upstream,\n options.resolution_first,\n options.resolution_last,\n options.resolution_cds,\n options.resolution_introns,\n options.resolution_downstream,\n options.extension_upstream,\n options.extension_downstream))\n\n # set normalization\n for c in counters:\n c.setNormalization(options.transcript_normalization)\n if options.output_all_profiles:\n c.setOutputProfiles(IOTools.openFile(E.getOutputFile(c.name) +\n \".profiles.tsv.gz\", \"w\"))\n\n if options.input_filename_counts:\n # read counts from file\n E.info(\"reading counts from %s\" % options.input_filename_counts)\n all_counts = pandas.read_csv(\n IOTools.openFile(options.input_filename_counts),\n sep='\\t', header=0, index_col=0)\n\n if len(counters) != 1:\n raise NotImplementedError(\n 'counting from matrix only implemented for 1 counter.')\n # build counter based on reference counter\n counter = _bam2geneprofile.UnsegmentedCounter(counters[0])\n counters = [counter]\n _bam2geneprofile.countFromCounts(counters, all_counts)\n\n else:\n E.info(\"starting counting with %i counters\" % len(counters))\n feature_names = _bam2geneprofile.countFromGTF(counters,\n gtf_iterator)\n\n # output matrices\n if not options.profile_normalizations:\n options.profile_normalizations.append(\"none\")\n elif \"all\" in options.profile_normalizations:\n options.profile_normalizations = [\"none\",\n \"area\",\n \"counts\",\n \"background\"]\n\n for method, counter in zip(options.methods, counters):\n profiles = []\n for norm in options.profile_normalizations:\n # build matrix, apply normalization\n profile = counter.getProfile(\n normalize=norm,\n background_region_bins=options.background_region_bins)\n profiles.append(profile)\n\n for x in range(1, len(profiles)):\n assert profiles[0].shape == profiles[x].shape\n\n # build a single matrix of all profiles for output\n matrix = numpy.concatenate(profiles)\n matrix.shape = len(profiles), len(profiles[0])\n matrix = matrix.transpose()\n\n with IOTools.openFile(E.getOutputFile(counter.name) +\n \".matrix.tsv.gz\", \"w\") as outfile:\n outfile.write(\"bin\\tregion\\tregion_bin\\t%s\\n\" % \"\\t\".join(\n options.profile_normalizations))\n fields = []\n bins = []\n for field, nbins in zip(counter.fields, counter.nbins):\n fields.extend([field] * nbins)\n bins.extend(list(range(nbins)))\n\n for row, cols in enumerate(zip(fields, bins, matrix)):\n outfile.write(\"%i\\t%s\\t\" %\n (row, \"\\t\".join([str(x) for x in cols[:-1]])))\n outfile.write(\"%s\\n\" %\n (\"\\t\".join([str(x) for x in cols[-1]])))\n\n with IOTools.openFile(E.getOutputFile(counter.name) +\n \".lengths.tsv.gz\", \"w\") as outfile:\n counter.writeLengthStats(outfile)\n\n if options.output_all_profiles:\n counter.closeOutputProfiles()\n\n if options.plot:\n\n import matplotlib\n # avoid Tk or any X\n matplotlib.use(\"Agg\")\n import matplotlib.pyplot as plt\n\n for method, counter in zip(options.methods, counters):\n\n if method in (\"geneprofile\",\n \"geneprofilewithintrons\",\n \"geneprofileabsolutedistancefromthreeprimeend\",\n \"utrprofile\",\n \"intervalprofile\",\n \"separateexonprofile\",\n \"separateexonprofilewithintrons\"):\n\n plt.figure()\n plt.subplots_adjust(wspace=0.05)\n max_scale = max([max(x) for x in counter.aggregate_counts])\n\n for x, counts in enumerate(counter.aggregate_counts):\n plt.subplot(6, 1, x + 1)\n plt.plot(range(len(counts)), counts)\n plt.title(counter.fields[x])\n plt.ylim(0, max_scale)\n\n figname = counter.name + \".full\"\n\n fn = E.getOutputFile(figname) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n plt.figure()\n\n points = []\n cuts = []\n for x, counts in enumerate(counter.aggregate_counts):\n points.extend(counts)\n cuts.append(len(counts))\n\n plt.plot(range(len(points)), points)\n\n xx, xxx = 0, []\n for x in cuts:\n xxx.append(xx + x // 2)\n xx += x\n plt.axvline(xx,\n color=\"r\",\n ls=\"--\")\n\n plt.xticks(xxx, counter.fields)\n\n figname = counter.name + \".detail\"\n\n fn = E.getOutputFile(figname) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n elif method == \"tssprofile\":\n\n plt.figure()\n plt.subplot(1, 3, 1)\n plt.plot(range(-options.extension_outward,\n options.extension_inward),\n counter.aggregate_counts[0])\n plt.title(counter.fields[0])\n plt.subplot(1, 3, 2)\n plt.plot(range(-options.extension_inward,\n options.extension_outward),\n counter.aggregate_counts[1])\n plt.title(counter.fields[1])\n plt.subplot(1, 3, 3)\n plt.title(\"combined\")\n plt.plot(range(-options.extension_outward,\n options.extension_inward),\n counter.aggregate_counts[0])\n plt.plot(range(-options.extension_inward,\n options.extension_outward),\n counter.aggregate_counts[1])\n plt.legend(counter.fields[:2])\n\n fn = E.getOutputFile(counter.name) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n elif method == \"midpointprofile\":\n\n plt.figure()\n plt.plot(numpy.arange(-options.resolution_upstream, 0),\n counter.aggregate_counts[0])\n plt.plot(numpy.arange(0, options.resolution_downstream),\n counter.aggregate_counts[1])\n\n fn = E.getOutputFile(counter.name) + \".png\"\n plt.savefig(os.path.expanduser(fn))\n\n # write footer and output benchmark information.\n E.Stop()", "metadata": "root.main", "header": "['module', '___EOS___']", "index": 324 } ]

[ { "span": "format ", "start_line": 645, "start_column": 12, "end_line": 645, "end_column": 18 }, { "span": "feature_names ", "start_line": 828, "start_column": 8, "end_line": 828, "end_column": 21 } ]

[]

1

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Unused local variable

saltstack/salt/salt/modules/elasticsearch.py

[ { "content": "def alias_create(indices, alias, hosts=None, body=None, profile=None):\n '''\n Create an alias for a specific index/indices\n\n CLI example::\n\n salt myminion elasticsearch.alias_create testindex_v1 testindex\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.indices.put_alias(index=indices, name=alias, body=body) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.alias_create", "header": "['module', '___EOS___']", "index": 100 }, { "content": "def document_create(index, doc_type, body=None, id=None, hosts=None, profile=None):\n '''\n Create a document in a specified index\n\n CLI example::\n\n salt myminion elasticsearch.document_create testindex doctype1 '{}'\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.index(index=index, doc_type=doc_type, body=body, id=id) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.document_create", "header": "['module', '___EOS___']", "index": 176 }, { "content": "def index_create(index, body=None, hosts=None, profile=None):\n '''\n Create an index\n\n CLI example::\n\n salt myminion elasticsearch.index_create testindex\n '''\n es = _get_instance(hosts, profile)\n try:\n if index_exists(index):\n return True\n else:\n result = es.indices.create(index=index, body=body) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.index_create", "header": "['module', '___EOS___']", "index": 255 }, { "content": "def mapping_create(index, doc_type, body, hosts=None, profile=None):\n '''\n Create a mapping in a given index\n\n CLI example::\n\n salt myminion elasticsearch.mapping_create testindex user '{ \"user\" : { \"properties\" : { \"message\" : {\"type\" : \"string\", \"store\" : true } } } }'\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.indices.put_mapping(index=index, doc_type=doc_type, body=body) # TODO error handling\n return mapping_get(index, doc_type)\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.mapping_create", "header": "['module', '___EOS___']", "index": 340 }, { "content": "def index_template_create(name, body, hosts=None, profile=None):\n '''\n Create an index template\n\n CLI example::\n\n salt myminion elasticsearch.index_template_create testindex_templ '{ \"template\": \"logstash-*\", \"order\": 1, \"settings\": { \"number_of_shards\": 1 } }'\n '''\n es = _get_instance(hosts, profile)\n try:\n result = es.indices.put_template(name=name, body=body) # TODO error handling\n return True\n except elasticsearch.exceptions.NotFoundError:\n return None\n return None", "metadata": "root.index_template_create", "header": "['module', '___EOS___']", "index": 395 } ]

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[]

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true

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Unused local variable

aws/aws-cli/tests/unit/test_argprocess.py

[ { "content": " def test_gen_structure_list_scalar_docs(self):\n schema = {\n \"type\": \"object\",\n \"properties\": {\n \"Consistent\": {\n \"type\": \"boolean\",\n },\n \"Args\": {\n \"type\": \"array\",\n \"items\": {\n \"type\": \"string\"\n }\n }\n }\n }\n argument_model = create_argument_model_from_schema(schema)\n m = model.DenormalizedStructureBuilder().with_members(OrderedDict([\n ('Consistent', {'type': 'boolean'}),\n ('Args', { 'type': 'list', 'member': { 'type': 'string', }}),\n ])).build_model()\n generated_example = self.shorthand_documenter.generate_shorthand_example(\n '--foo', m)\n self.assertIn('Consistent=boolean,Args=string,string',\n generated_example)", "metadata": "root.TestDocGen.test_gen_structure_list_scalar_docs", "header": "['class', 'TestDocGen', '(', 'BaseArgProcessTest', ')', ':', '___NEWLINE___', \"# These aren't very extensive doc tests, as we want to stay somewhat\", '___NL___', '# flexible and allow the docs to slightly change without breaking these', '___NL___', '# tests.', '___NL___', '___EOS___']", "index": 536 }, { "content": " def test_can_gen_recursive_structure(self):\n argument = self.get_param_model('dynamodb.PutItem.Item')\n generated_example = self.get_generated_example_for(argument)", "metadata": "root.TestDocGen.test_can_gen_recursive_structure", "header": "['class', 'TestDocGen', '(', 'BaseArgProcessTest', ')', ':', '___NEWLINE___', \"# These aren't very extensive doc tests, as we want to stay somewhat\", '___NL___', '# flexible and allow the docs to slightly change without breaking these', '___NL___', '# tests.', '___NL___', '___EOS___']", "index": 561 } ]

[ { "span": "argument_model ", "start_line": 551, "start_column": 8, "end_line": 551, "end_column": 22 }, { "span": "generated_example ", "start_line": 563, "start_column": 8, "end_line": 563, "end_column": 25 } ]

[]

1

true

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Unused import

ufora/ufora/ufora/FORA/Axioms/generateAxiomSignatures.py

[ { "content": "# Copyright 2015 Ufora Inc.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\n\"\"\"\nRun this script to generate a file of axiom signatures which can be fed into Axioms_consistency_test.py.\nThis generates all axioms, but by default comments them all out. Uncomment the ones you want to test.\n\"\"\"\n\nimport ufora.native\nimport ufora.FORA.python.Runtime as Runtime\nimport ufora.native.FORA as FORANative\nimport os\n\ndir = os.path.dirname(__file__)\nAXIOMS_TO_TEST_FILENAME = os.path.join(dir, \"AXIOMS_TO_TEST.txt\")\n\nruntime = Runtime.getMainRuntime()\naxioms = runtime.getAxioms()\n\nreadme_string = '\"\"\"\\nThis file lists all the axioms we would like to check for consistency in\\nAxioms_consistency_test.py. It supports basic python-like commenting\\n\"\"\"\\n\\n'\n\nwith open(AXIOMS_TO_TEST_FILENAME, \"w\") as f:\n f.write(readme_string)\n f.write('\"\"\"\\n')\n for i in range(axioms.axiomCount):\n f.write(\"%s\\n\" %axioms.getAxiomGroupByIndex(i).signature())\n f.write('\"\"\"')\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import ufora.native", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 19 }, { "span": "import ufora.native.FORA as FORANative", "start_line": 21, "start_column": 0, "end_line": 21, "end_column": 38 } ]

[]

1

false

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"\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\"\"\"", "\\", "10", ";", "Run", " ", "this", " ", "script", " ", "to", " ", "generat", "e", " ", "a", " ", "file", " ", "of", " ", "axiom", " ", "signa", "tures", " ", "whi", "ch", " ", "can", " ", "be", " ", "fed", " ", "int", "o", " ", "Axi", "oms", "\\u", "consiste", "nc", "y", "\\u", "test", ".", "py", ".", "\\", "10", ";", "Thi", "s", " ", "generat", "es", " ", "all", " ", "axiom", "s", ",", " ", "but", " ", "by", " ", "default", " ", "comment", "s", " ", "them", " ", "all", " ", "out", ".", " ", "Unco", "mmen", "t", " ", "the", " ", "ones", " ", "you", " ", "want", " ", "to", " ", "test", ".", "\\", "10", ";\"\"\"_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "import_", "ufo", "ra_", "._", "native_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "ufo", "ra_", "._", "FOR", "A_", "._", "python_", "._", "Runtime_", "as_", "Runtime_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "ufo", "ra_", "._", "native_", "._", "FOR", "A_", "as_", "FOR", "AN", "ative_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "import_", "os_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "dir_", "=_", "os_", "._", "path_", "._", "dirname_", "(_", "\\u\\u", "file\\u\\u_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "AX", "IO", "MS", "\\u", "TO", "\\u", "TEST", "\\u", "FILENAME_", "=_", "os_", "._", "path_", "._", "join_", "(_", "dir_", ",_", "\"", "AX", "IO", "MS", "\\u", "TO", "\\u", "TEST", ".", "txt", "\"_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "runtime_", "=_", "Runtime_", "._", "get", "Main", "Runtime_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "axiom", "s_", "=_", "runtime_", "._", "get", "Axi", "oms", "_", "(_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "readme", "\\u", "string_", "=_", "'\"", "\"\"", "\\\\", "n", "Thi", "s", " ", "file", " ", "lists", " ", "all", " ", "the", " ", "axiom", "s", " ", "we", " ", "wou", "ld", " ", "like", " ", "to", " ", "check", " ", "for", " ", "consiste", "nc", "y", " ", "in", "\\\\", "n", "Axi", "oms", "\\u", "consiste", "nc", "y", "\\u", "test", ".", "py", ".", " ", "It", " ", "support", "s", " ", "basic", " ", "python", "-", "like", " ", "comment", "ing", "\\\\", "n", "\"\"\"", "\\\\", "n", "\\\\", "n", "'_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "with_", "open_", "(_", "AX", "IO", "MS", "\\u", "TO", "\\u", "TEST", "\\u", "FILENAME_", ",_", "\"", "w", "\"_", ")_", "as_", "f_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "f_", "._", "write_", "(_", "readme", "\\u", "string_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "f_", "._", "write_", "(_", "'\"", "\"\"", "\\\\", "n", "'_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "for_", "i_", "in_", "range_", "(_", "axiom", "s_", "._", "axiom", "Count_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "f_", "._", "write_", "(_", "\"%", "s", "\\\\", "n", "\"_", "%_", "axiom", "s_", "._", "get", "Axi", "om", "Group", "By", "Index_", "(_", "i_", ")_", "._", "signature_", "(_", ")_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "f_", "._", "write_", "(_", "'\"", "\"\"", "'_", ")_", "\\u\\u\\uDEDENT\\u\\u\\u_" ]

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Unused import

nigma/django-session-activity/session_activity/conf.py

[ { "content": "#-*- coding: utf-8 -*-\n\nfrom __future__ import absolute_import, division, print_function, unicode_literals\n\nimport datetime\n\nfrom django.conf import settings\n\nfrom appconf import AppConf\n\n\nSESSION_IP_KEY = \"_activity_ip\"\nSESSION_LAST_USED_KEY = \"_activity_last_used\"\nSESSION_USER_AGENT_KEY = \"_activity_user_agent\"\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class SessionActivityAppConf(AppConf):\n\n UPDATE_THROTTLE = datetime.timedelta(minutes=5)\n", "metadata": "root.SessionActivityAppConf", "header": "['module', '___EOS___']", "index": 16 }, { "content": " def configure_update_throttle(self, value):\n if isinstance(value, int):\n value = datetime.timedelta(seconds=value)\n return value", "metadata": "root.SessionActivityAppConf.configure_update_throttle", "header": "['class', 'SessionActivityAppConf', '(', 'AppConf', ')', ':', '___EOS___']", "index": 20 } ]

[ { "span": "from django.conf import settings", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 32 } ]

[]

1

false

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Unused local variable

treeio/treeio/treeio/sales/forms.py

[ { "content": " def __init__(self, user, skip=None, *args, **kwargs):\n if skip is None:\n skip = []\n super(ProductFilterForm, self).__init__(*args, **kwargs)\n\n self.fields['product_type'].queryset = Object.filter_permitted(user,\n Product.objects.filter(active=True))\n self.fields['product_type'].required = False\n self.fields['product_type'].label = _(\"Product type\")\n\n self.fields['supplier'].queryset = Object.filter_permitted(\n user, Contact.objects)\n self.fields['supplier'].required = False\n self.fields['supplier'].widget.attrs.update({'class': 'autocomplete',\n 'callback': reverse('identities_ajax_contact_lookup')})\n self.fields['supplier'].label = _(\"Supplier\")\n\n self.fields['active'].required = False\n self.fields['active'].initial = True\n self.fields['active'].label = _(\"Active\")", "metadata": "root.ProductFilterForm.__init__", "header": "['class', 'ProductFilterForm', '(', 'forms', '.', 'ModelForm', ')', ':', '___EOS___']", "index": 583 }, { "content": " def __init__(self, user, skip=None, *args, **kwargs):\n if skip is None:\n skip = []\n super(LeadFilterForm, self).__init__(*args, **kwargs)\n\n self.fields['contact'].queryset = Object.filter_permitted(\n user, Contact.objects)\n self.fields['contact'].widget.attrs.update({'class': 'autocomplete',\n 'callback': reverse('identities_ajax_contact_lookup')})\n self.fields['contact'].required = False\n self.fields['contact'].label = _(\"Contact\")\n\n self.fields['products_interested'].queryset = Object.filter_permitted(\n user, Product.objects)\n self.fields['products_interested'].required = False\n self.fields['products_interested'].help_text = \"\"\n self.fields['products_interested'].label = _(\"Products interested\")\n\n self.fields['source'].queryset = Object.filter_permitted(user,\n SaleSource.objects.filter(active=True))\n self.fields['source'].required = False\n self.fields['source'].label = _(\"Source\")\n\n self.fields['status'].queryset = Object.filter_permitted(user,\n SaleStatus.objects.filter(use_leads=True))\n self.fields['status'].required = False\n self.fields['status'].label = _(\"Status\")\n\n self.fields['contact_method'].required = False\n self.fields['contact_method'].label = _(\"Contact method\")", "metadata": "root.LeadFilterForm.__init__", "header": "['class', 'LeadFilterForm', '(', 'forms', '.', 'ModelForm', ')', ':', '___EOS___']", "index": 937 }, { "content": " def __init__(self, user, skip=None, *args, **kwargs):\n if skip is None:\n skip = []\n super(OpportunityFilterForm, self).__init__(*args, **kwargs)\n\n self.fields['contact'].queryset = Object.filter_permitted(\n user, Contact.objects)\n self.fields['contact'].widget.attrs.update({'class': 'autocomplete',\n 'callback': reverse('identities_ajax_contact_lookup')})\n self.fields['contact'].required = False\n self.fields['contact'].label = _(\"Contact\")\n\n self.fields['source'].queryset = Object.filter_permitted(user,\n SaleSource.objects.filter(active=True))\n self.fields['source'].required = False\n self.fields['source'].label = _(\"Source\")\n\n self.fields['products_interested'].queryset = Object.filter_permitted(user,\n Product.objects.filter(active=True))\n self.fields['products_interested'].required = False\n self.fields['products_interested'].help_text = \"\"\n self.fields['products_interested'].label = _(\"Products interested\")\n\n self.fields['status'].queryset = Object.filter_permitted(user,\n SaleStatus.objects.filter(use_opportunities=True))\n self.fields['status'].required = False\n self.fields['status'].label = _(\"Status\")", "metadata": "root.OpportunityFilterForm.__init__", "header": "['class', 'OpportunityFilterForm', '(', 'forms', '.', 'ModelForm', ')', ':', '___EOS___']", "index": 1062 } ]

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[]

1

true

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Unused import

simonw/bugle_project/bugle_project/bugle/management/commands/populate_is_todo.py

[ { "content": "from django.core.management.base import BaseCommand, CommandError\nfrom bugle.models import Blast\nfrom django.contrib.auth.models import User\nimport re, sys\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Command(BaseCommand):\n help = \"\"\"\n Ensures that all @username mentions are added to the mentions DB table\n \"\"\".strip()\n \n requires_model_validation = True\n can_import_settings = True\n ", "metadata": "root.Command", "header": "['module', '___EOS___']", "index": 5 }, { "content": " def handle(self, *args, **options):\n if len(args) != 0:\n raise CommandError(\"Command doesn't accept any arguments\")\n \n for blast in Blast.objects.all():\n blast.is_todo = blast.derive_is_todo()\n blast.save()\n sys.stdout.write('.')\n sys.stdout.write(' done\\n')", "metadata": "root.Command.handle", "header": "['class', 'Command', '(', 'BaseCommand', ')', ':', '___EOS___']", "index": 13 } ]

[ { "span": "from django.contrib.auth.models import User", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 43 }, { "span": "import re, sys", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 14 } ]

[]

1

false

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Imprecise assert

pydata/pandas/pandas/tests/series/test_misc_api.py

[ { "content": " def test_tab_completion(self):\n # GH 9910\n s = Series(list('abcd'))\n # Series of str values should have .str but not .dt/.cat in __dir__\n self.assertTrue('str' in dir(s))\n self.assertTrue('dt' not in dir(s))\n self.assertTrue('cat' not in dir(s))\n\n # similiarly for .dt\n s = Series(date_range('1/1/2015', periods=5))\n self.assertTrue('dt' in dir(s))\n self.assertTrue('str' not in dir(s))\n self.assertTrue('cat' not in dir(s))\n\n # similiarly for .cat, but with the twist that str and dt should be\n # there if the categories are of that type first cat and str\n s = Series(list('abbcd'), dtype=\"category\")\n self.assertTrue('cat' in dir(s))\n self.assertTrue('str' in dir(s)) # as it is a string categorical\n self.assertTrue('dt' not in dir(s))\n\n # similar to cat and str\n s = Series(date_range('1/1/2015', periods=5)).astype(\"category\")\n self.assertTrue('cat' in dir(s))\n self.assertTrue('str' not in dir(s))\n self.assertTrue('dt' in dir(s)) # as it is a datetime categorical", "metadata": "root.TestSeriesMisc.test_tab_completion", "header": "['class', 'TestSeriesMisc', '(', 'TestData', ',', 'SharedWithSparse', ',', 'tm', '.', 'TestCase', ')', ':', '___EOS___']", "index": 122 } ]

[ { "span": "self.assertTrue('str' in dir(s))", "start_line": 126, "start_column": 8, "end_line": 126, "end_column": 40 }, { "span": "self.assertTrue('dt' not in dir(s))", "start_line": 127, "start_column": 8, "end_line": 127, "end_column": 43 }, { "span": "self.assertTrue('cat' not in dir(s))", "start_line": 128, "start_column": 8, "end_line": 128, "end_column": 44 }, { "span": "self.assertTrue('dt' in dir(s))", "start_line": 132, "start_column": 8, "end_line": 132, "end_column": 39 }, { "span": "self.assertTrue('str' not in dir(s))", "start_line": 133, "start_column": 8, "end_line": 133, "end_column": 44 }, { "span": "self.assertTrue('cat' not in dir(s))", "start_line": 134, "start_column": 8, "end_line": 134, "end_column": 44 }, { "span": "self.assertTrue('cat' in dir(s))", "start_line": 139, "start_column": 8, "end_line": 139, "end_column": 40 }, { "span": "self.assertTrue('str' in dir(s)) ", "start_line": 140, "start_column": 8, "end_line": 140, "end_column": 40 }, { "span": "self.assertTrue('dt' not in dir(s))", "start_line": 141, "start_column": 8, "end_line": 141, "end_column": 43 }, { "span": "self.assertTrue('cat' in dir(s))", "start_line": 145, "start_column": 8, "end_line": 145, "end_column": 40 }, { "span": "self.assertTrue('str' not in dir(s))", "start_line": 146, "start_column": 8, "end_line": 146, "end_column": 44 }, { "span": "self.assertTrue('dt' in dir(s)) ", "start_line": 147, "start_column": 8, "end_line": 147, "end_column": 39 } ]

[]

1

true

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Imprecise assert

mhrivnak/radiotherm/tests/field/test_build_get_return.py

[ { "content": " def test_with_name(self):\n field = Field('/fake', 'fake')\n ret = field._build_get_return(self.INT_RETURN_VALUE)\n self.assertTrue('raw' in ret)\n self.assertEqual(len(ret), 1)\n self.assertEqual(ret['raw'], self.INT_RETURN_VALUE['fake'])", "metadata": "root.TestBuildGetReturn.test_with_name", "header": "['class', 'TestBuildGetReturn', '(', 'BaseTestCase', ')', ':', '___EOS___']", "index": 9 }, { "content": " def test_without_name(self):\n field = Field('/fake', None)\n ret = field._build_get_return(self.NO_NAME_RETURN_VALUE)\n self.assertTrue('raw' in ret)\n self.assertEqual(len(ret), 1)\n self.assertEqual(ret['raw'], self.NO_NAME_RETURN_VALUE)", "metadata": "root.TestBuildGetReturn.test_without_name", "header": "['class', 'TestBuildGetReturn', '(', 'BaseTestCase', ')', ':', '___EOS___']", "index": 16 }, { "content": " def test_with_human(self):\n field = Field('/fake', 'fake', {0: 'Off', 1: 'On'})\n field._convert_to_human = MagicMock(return_value='On')\n ret = field._build_get_return(self.INT_RETURN_VALUE)\n self.assertTrue('raw' in ret)\n self.assertTrue('human' in ret)\n self.assertEqual(ret['human'], 'On')", "metadata": "root.TestBuildGetReturn.test_with_human", "header": "['class', 'TestBuildGetReturn', '(', 'BaseTestCase', ')', ':', '___EOS___']", "index": 23 } ]

[ { "span": "self.assertTrue('raw' in ret)", "start_line": 12, "start_column": 8, "end_line": 12, "end_column": 37 }, { "span": "self.assertTrue('raw' in ret)", "start_line": 19, "start_column": 8, "end_line": 19, "end_column": 37 }, { "span": "self.assertTrue('raw' in ret)", "start_line": 27, "start_column": 8, "end_line": 27, "end_column": 37 }, { "span": "self.assertTrue('human' in ret)", "start_line": 28, "start_column": 8, "end_line": 28, "end_column": 39 } ]

[]

1

true

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Unused import

mvantellingen/localshop/docs/conf.py

[ { "content": "# -*- coding: utf-8 -*-\n#\n# Localshop documentation build configuration file, created by\n# sphinx-quickstart on Mon Apr 27 13:39:49 2015.\n#\n# This file is execfile()d with the current directory set to its\n# containing dir.\n#\n# Note that not all possible configuration values are present in this\n# autogenerated file.\n#\n# All configuration values have a default; values that are commented out\n# serve to show the default.\n\nimport sys\nimport os\nimport shlex\n\n# If extensions (or modules to document with autodoc) are in another directory,\n# add these directories to sys.path here. If the directory is relative to the\n# documentation root, use os.path.abspath to make it absolute, like shown here.\n#sys.path.insert(0, os.path.abspath('.'))\n\n# -- General configuration ------------------------------------------------\n\n# If your documentation needs a minimal Sphinx version, state it here.\n#needs_sphinx = '1.0'\n\n# Add any Sphinx extension module names here, as strings. They can be\n# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom\n# ones.\nextensions = [\n 'sphinx.ext.autodoc',\n]\n\n# Add any paths that contain templates here, relative to this directory.\ntemplates_path = ['_templates']\n\n# The suffix(es) of source filenames.\n# You can specify multiple suffix as a list of string:\n# source_suffix = ['.rst', '.md']\nsource_suffix = '.rst'\n\n# The encoding of source files.\n#source_encoding = 'utf-8-sig'\n\n# The master toctree document.\nmaster_doc = 'index'\n\n# General information about the project.\nproject = u'Localshop'\ncopyright = u'2015, Michael van Tellingen'\nauthor = u'Michael van Tellingen'\n\n# The version info for the project you're documenting, acts as replacement for\n# |version| and |release|, also used in various other places throughout the\n# built documents.\n#\n# The short X.Y version.\nversion = '0.8.3'\n# The full version, including alpha/beta/rc tags.\nrelease = '0.8.3'\n\n# The language for content autogenerated by Sphinx. Refer to documentation\n# for a list of supported languages.\n#\n# This is also used if you do content translation via gettext catalogs.\n# Usually you set \"language\" from the command line for these cases.\nlanguage = None\n\n# There are two options for replacing |today|: either, you set today to some\n# non-false value, then it is used:\n#today = ''\n# Else, today_fmt is used as the format for a strftime call.\n#today_fmt = '%B %d, %Y'\n\n# List of patterns, relative to source directory, that match files and\n# directories to ignore when looking for source files.\nexclude_patterns = ['_build']\n\n# The reST default role (used for this markup: `text`) to use for all\n# documents.\n#default_role = None\n\n# If true, '()' will be appended to :func: etc. cross-reference text.\n#add_function_parentheses = True\n\n# If true, the current module name will be prepended to all description\n# unit titles (such as .. function::).\n#add_module_names = True\n\n# If true, sectionauthor and moduleauthor directives will be shown in the\n# output. They are ignored by default.\n#show_authors = False\n\n# The name of the Pygments (syntax highlighting) style to use.\npygments_style = 'sphinx'\n\n# A list of ignored prefixes for module index sorting.\n#modindex_common_prefix = []\n\n# If true, keep warnings as \"system message\" paragraphs in the built documents.\n#keep_warnings = False\n\n# If true, `todo` and `todoList` produce output, else they produce nothing.\ntodo_include_todos = False\n\n\n# -- Options for HTML output ----------------------------------------------\n\n# The theme to use for HTML and HTML Help pages. See the documentation for\n# a list of builtin themes.\n#html_theme = 'classic'\n\n# Theme options are theme-specific and customize the look and feel of a theme\n# further. For a list of options available for each theme, see the\n# documentation.\n#html_theme_options = {}\n\n# Add any paths that contain custom themes here, relative to this directory.\n#html_theme_path = []\n\n# The name for this set of Sphinx documents. If None, it defaults to\n# \"<project> v<release> documentation\".\n#html_title = None\n\n# A shorter title for the navigation bar. Default is the same as html_title.\n#html_short_title = None\n\n# The name of an image file (relative to this directory) to place at the top\n# of the sidebar.\n#html_logo = None\n\n# The name of an image file (within the static path) to use as favicon of the\n# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32\n# pixels large.\n#html_favicon = None\n\n# Add any paths that contain custom static files (such as style sheets) here,\n# relative to this directory. They are copied after the builtin static files,\n# so a file named \"default.css\" will overwrite the builtin \"default.css\".\nhtml_static_path = ['_static']\n\n# Add any extra paths that contain custom files (such as robots.txt or\n# .htaccess) here, relative to this directory. These files are copied\n# directly to the root of the documentation.\n#html_extra_path = []\n\n# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,\n# using the given strftime format.\n#html_last_updated_fmt = '%b %d, %Y'\n\n# If true, SmartyPants will be used to convert quotes and dashes to\n# typographically correct entities.\n#html_use_smartypants = True\n\n# Custom sidebar templates, maps document names to template names.\n#html_sidebars = {}\n\n# Additional templates that should be rendered to pages, maps page names to\n# template names.\n#html_additional_pages = {}\n\n# If false, no module index is generated.\n#html_domain_indices = True\n\n# If false, no index is generated.\n#html_use_index = True\n\n# If true, the index is split into individual pages for each letter.\n#html_split_index = False\n\n# If true, links to the reST sources are added to the pages.\n#html_show_sourcelink = True\n\n# If true, \"Created using Sphinx\" is shown in the HTML footer. Default is True.\n#html_show_sphinx = True\n\n# If true, \"(C) Copyright ...\" is shown in the HTML footer. Default is True.\n#html_show_copyright = True\n\n# If true, an OpenSearch description file will be output, and all pages will\n# contain a <link> tag referring to it. The value of this option must be the\n# base URL from which the finished HTML is served.\n#html_use_opensearch = ''\n\n# This is the file name suffix for HTML files (e.g. \".xhtml\").\n#html_file_suffix = None\n\n# Language to be used for generating the HTML full-text search index.\n# Sphinx supports the following languages:\n# 'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja'\n# 'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr'\n#html_search_language = 'en'\n\n# A dictionary with options for the search language support, empty by default.\n# Now only 'ja' uses this config value\n#html_search_options = {'type': 'default'}\n\n# The name of a javascript file (relative to the configuration directory) that\n# implements a search results scorer. If empty, the default will be used.\n#html_search_scorer = 'scorer.js'\n\n# Output file base name for HTML help builder.\nhtmlhelp_basename = 'Localshopdoc'\n\n# -- Options for LaTeX output ---------------------------------------------\n\nlatex_elements = {\n# The paper size ('letterpaper' or 'a4paper').\n#'papersize': 'letterpaper',\n\n# The font size ('10pt', '11pt' or '12pt').\n#'pointsize': '10pt',\n\n# Additional stuff for the LaTeX preamble.\n#'preamble': '',\n\n# Latex figure (float) alignment\n#'figure_align': 'htbp',\n}\n\n# Grouping the document tree into LaTeX files. List of tuples\n# (source start file, target name, title,\n# author, documentclass [howto, manual, or own class]).\nlatex_documents = [\n (master_doc, 'Localshop.tex', u'Localshop Documentation',\n u'Michael van Tellingen', 'manual'),\n]\n\n# The name of an image file (relative to this directory) to place at the top of\n# the title page.\n#latex_logo = None\n\n# For \"manual\" documents, if this is true, then toplevel headings are parts,\n# not chapters.\n#latex_use_parts = False\n\n# If true, show page references after internal links.\n#latex_show_pagerefs = False\n\n# If true, show URL addresses after external links.\n#latex_show_urls = False\n\n# Documents to append as an appendix to all manuals.\n#latex_appendices = []\n\n# If false, no module index is generated.\n#latex_domain_indices = True\n\n\n# -- Options for manual page output ---------------------------------------\n\n# One entry per manual page. List of tuples\n# (source start file, name, description, authors, manual section).\nman_pages = [\n (master_doc, 'localshop', u'Localshop Documentation',\n [author], 1)\n]\n\n# If true, show URL addresses after external links.\n#man_show_urls = False\n\n\n# -- Options for Texinfo output -------------------------------------------\n\n# Grouping the document tree into Texinfo files. List of tuples\n# (source start file, target name, title, author,\n# dir menu entry, description, category)\ntexinfo_documents = [\n (master_doc, 'Localshop', u'Localshop Documentation',\n author, 'Localshop', 'One line description of project.',\n 'Miscellaneous'),\n]\n\n# Documents to append as an appendix to all manuals.\n#texinfo_appendices = []\n\n# If false, no module index is generated.\n#texinfo_domain_indices = True\n\n# How to display URL addresses: 'footnote', 'no', or 'inline'.\n#texinfo_show_urls = 'footnote'\n\n# If true, do not generate a @detailmenu in the \"Top\" node's menu.\n#texinfo_no_detailmenu = False\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import sys", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 10 }, { "span": "import os", "start_line": 15, "start_column": 0, "end_line": 15, "end_column": 9 }, { "span": "import shlex", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 12 } ]

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Use of 'global' at module level

RicterZ/reprocks/client/reprocks_client.py

[ { "content": "#! /usr/bin/python\n\nimport threading\nimport socket\nimport sys,time\nimport SocketServer,struct,select\n\nglobal bufLen\nglobal endflag\nglobal socksPort\n###################\nsocksPort = 50000 #Default socks5 proxy port\n###################\nendflag = []\nbufLen = 4*1024\n\n\n\n\n\n\n\n\n\n\n\nif __name__ == '__main__':\n main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "global bufLen", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 13 }, { "span": "global endflag", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 14 }, { "span": "global socksPort", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 16 } ]

[]

1

true

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Missing call to `__init__` during object initialization

azoft-dev-team/imagrium/env/Lib/optparse.py

[ { "content": " def __init__(self, msg):\n self.msg = msg", "metadata": "root.OptParseError.__init__", "header": "['class', 'OptParseError', '(', 'Exception', ')', ':', '___EOS___']", "index": 97 }, { "content": "class OptionError (OptParseError):\n \"\"\"\n Raised if an Option instance is created with invalid or\n inconsistent arguments.\n \"\"\"\n\n", "metadata": "root.OptionError", "header": "['module', '___EOS___']", "index": 104 }, { "content": " def __init__(self, msg, option):\n self.msg = msg\n self.option_id = str(option)", "metadata": "root.OptionError.__init__", "header": "['class', 'OptionError', '(', 'OptParseError', ')', ':', '___EOS___']", "index": 110 }, { "content": "class BadOptionError (OptParseError):\n \"\"\"\n Raised if an invalid option is seen on the command line.\n \"\"\"\n", "metadata": "root.BadOptionError", "header": "['module', '___EOS___']", "index": 131 }, { "content": " def __init__(self, opt_str):\n self.opt_str = opt_str", "metadata": "root.BadOptionError.__init__", "header": "['class', 'BadOptionError', '(', 'OptParseError', ')', ':', '___EOS___']", "index": 135 } ]

[ { "span": "class OptionError (OptParseError):", "start_line": 104, "start_column": 0, "end_line": 104, "end_column": 34 }, { "span": "class BadOptionError (OptParseError):", "start_line": 131, "start_column": 0, "end_line": 131, "end_column": 37 } ]

[ { "span": "def __init__(self, msg):", "start_line": 97, "start_column": 4, "end_line": 97, "end_column": 28 }, { "span": "def __init__(self, msg, option):", "start_line": 110, "start_column": 4, "end_line": 110, "end_column": 36 }, { "span": "def __init__(self, opt_str):", "start_line": 135, "start_column": 4, "end_line": 135, "end_column": 32 } ]

1

false

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Unused import

RJT1990/pyflux/pyflux/inference/__init__.py

[ { "content": "\"\"\"\nThe module Inference holds estimation procedures.\n\"\"\"\nfrom priors import Normal, InverseGamma, Uniform\nfrom metropolis_hastings import metropolis_hastings\nfrom norm_post_sim import norm_post_sim\nfrom bbvi import BBVI\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "from priors import Normal, InverseGamma, Uniform", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 48 }, { "span": "from metropolis_hastings import metropolis_hastings", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 51 }, { "span": "from norm_post_sim import norm_post_sim", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 39 }, { "span": "from bbvi import BBVI", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 21 } ]

[]

1

false

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Variable defined multiple times

tvidas/a5/scripts/bin/control.py

[ { "content": "def runInVM(m,job,VMs,adbport,vmlock,adbl,results, fcnt):\n\tname = multiprocessing.current_process().name\n\n \tformatter = logging.Formatter(fmt=LOGFORMAT,datefmt=LOGDATEFORMAT)\n \tpathForFile = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \"-run.log\"\n\tprint \"HH%sHH\" % pathForFile\n \thandler = logging.FileHandler(pathForFile, mode='w')\n \thandler.setFormatter(formatter)\n\n \tvlogger = logger.getChild(\"worker\" + name + \".vm\")\n \tvlogger.setLevel(logging.DEBUG)\n \tvlogger.addHandler(handler)\n\n\tvlogger.info(\"logging started at \" + pathForFile)\n\n\n\trval = True\n\tif VMs[m].state in [\"Reserved\"] :\n\t\twith vmlock:\n\t\t\tVMlocal = VMs[m];\n\t\t\tVMlocal.state = \"Starting\"\n\t\t\tVMs[m] = VMlocal;\n\t\t#emulator doens't observe system hosts: (must start emulator with -partition-size 128 (for example) to give room to write)\n\t\t#adb pull /etc/hosts\n\t\t#edit to 10.0.2.2 (your local machine)\n\t\t#adb remount\n\t\t#adb push hosts /etc/hosts\n\t\tt1 = time.time()\n\t\t\n\n\t\t#emulator -avd NAME -partition-size 128 -ports 5,2322 -no-window -tcpdump FILE -dns-server SERVER -http-proxy PROXY\n\t\t#TODO instead of wipe-data, would be best to re-create the VM\n\t\tEMUSTART = \"%s/emulator -avd %s -partition-size %s -port %s -no-window -tcpdump %s -wipe-data\"\n\t\t#./adb logcat\n\t\t#./adb install /storage/malware/RU.apk\n\t\t#./adb shell am broadcast -a android.intent.action.BOOT_COMPLETED\n\n\t\t#start (with specified ports)\n\t\t#emulator -ports X,Y @avd_X\n\n\t\t#wait for emulator to be fully started\n\t\t#./adb -s emulator-5584 wait-for-device\n\t\tEMUWAIT = \"%s/adb -s %s wait-for-device\"\n\n\t\tEMULOGCAT = \"%s/adb -s %s logcat\"\n\n\t\t#command\n\t\t#adb -s emualtor-X shell cmd\n\n\t\tEMUINSTALL = \"%s/adb -s %s install %s\"\n\n\t\t#<INTENT> specifications include these flags:\n\t\t# [-a <ACTION>] [-d <DATA_URI>] [-t <MIME_TYPE>]\n\t\t# [-c <CATEGORY> [-c <CATEGORY>] ...]\n\t\t# [-e|--es <EXTRA_KEY> <EXTRA_STRING_VALUE> ...]\n\t\t# [--esn <EXTRA_KEY> ...]\n\t\t# [--ez <EXTRA_KEY> <EXTRA_BOOLEAN_VALUE> ...]\n\t\t# [-e|--ei <EXTRA_KEY> <EXTRA_INT_VALUE> ...]\n\t\t#adb shell am broadcast -a android.intent.action.BOOT_COMPLETED -c android.intent.category.HOME -n net.fstab.checkit_android/.StartupReceiver\n\t\t#am broadcast -a android.intent.action.BOOT_COMPLETED\n\t\tEMUINTENT = \"%s/adb -s %s shell am broadcast -a %s\"\n\t\n\t\t#adb shell am start -n com.package.name/com.package.name.ActivityName\n\t\t#am start -a android.intent.action.MAIN -n com.iftitah.android.contact/com.iftitah.android.contact.Contact\n\t\t#am start -a <ACTION> -n <PACKAGE>/<PACKAGE><ACTIVITYCLASS>\n\t\tEMULAUNCH = \"%s/adb -s %s shell am start -a %s -n %s/%s\"\n\n\t\t#kill\n\t\t#could do adb shell stop\n\t\t#but why really? just going to reset for next run anyway\n\t\t# (though a stop would preserve state)\n\t\t#adb -s emulator-X emu kill\n\t\tEMUKILL = \"%s/adb -s %s emu kill\"\n\n\t\t#monkey\n\t\t#$ adb shell monkey -v -p your.package.name 100 --ignore-security-exceptions -s SEED\n\t\tEMUMONKEY = \"%s/adb -s %s shell monkey -v -p %s 100 --ignore-security-exceptions -s %s --throttle 250\"\n\n\t\t#update database with start values\n\t\tpermissions_filename = job['sha256'] + \".xml\"\n\t\timage_used = VMs[m].name\n\t\tstart_time = time.strftime(\"%Y-%m-%d-%H:%M:%S\", time.gmtime())\n\t\tmsdb.updateStartRun(job['jobuuid'],image_used,start_time,permissions_filename,MSVERSION)\n\n\t\tvlogger.info( name + \":\" + \"...starting VM \" + VMs[m].name)\n\t\t#start it\n\t\tcmd = EMUSTART % ( SDKPATH, VMs[m].name, PSIZE, str(adbport), MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256']+ \"-orig.pcap\")\n\t\tvlogger.info( name + \":\" + cmd)\n\t\tpEmu = None\n\t\ttry:\n\t\t\targs = shlex.split(cmd)\n\t\t\tpEmu = subprocess.Popen(args)\n\t\texcept:\n\t\t\tvlogger.info( name + \":\" + \"emulator start error\", sys.exc_info()[0])\n\t\t\tsys.exit(1)\n\t\t#check for start error conditions:\n\t\t#emulator: WARNING: ignoring locked SD Card image at /path/to/avd/ms-sdk003-003/sdcard.img\n\t\t#it seems too many emulator instances are running on this machine. Aborting\n\n\n\t\t#wait for it to start\n\t\tcmd = EMUWAIT % ( ADBPATH, \"emulator-\" + str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\t\tvlogger.info( name + \":\" + \"emulator wait returned: %d\" % ret )\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator wait error: %s\" % cmd )\n\t\t\tsys.exit(1)\n\t\tvlogger.info( name + \":\" + \"emulator-\" + str(adbport) + \" started\")\n\t\ttime.sleep(VM_POLL_REST * 3)\n\t\twith vmlock:\n\t\t\tVMlocal = VMs[m];\n\t\t\tVMlocal.state = \"Running\"\n\t\t\tVMs[m] = VMlocal;\n\n\t\t#start logcat\n\t\t#start it\n\t\tcmd = EMULOGCAT % ( SDKPATH, \"emulator-\" + str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\tpLogCat = None\n\t\tfLogCat = None\n\t\ttry:\n\t\t\targs = shlex.split(cmd)\n\t\t\tvlogger.info( args)\n\t\t\tfLogCat = open(MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \".logcat\",\"w\")\n\t\t\tfNull = open(\"/dev/null\")\n#TODO\t\t\tpLogCat = subprocess.Popen(args, stdin=fNull, stderr=fNull, stdout=fLogCat)\n\t\texcept:\n\t\t\tvlogger.error( name + \": \" + cmd )\n\t\t\tvlogger.error( formatExceptionInfo())\n\t\t\tvlogger.error( name + \":\" + \"emulator logcat error\", sys.exc_info()[0])\n\t\t\tsys.exit(1)\n\n\t\t#install malicious app\n\t\tcmd = EMUINSTALL % ( ADBPATH, \"emulator-\" + str(adbport), \"'\" + job['fullpath'] + \"'\")\n\t\tvlogger.info( name + \":\" + cmd)\n\t\n\t\ttry:\n\t\t\tret = subprocess.check_output([cmd], shell=True)\n\t\t\tvlogger.info( name + \":\" + \"emulator install returned: %s\" % ret )\n\t\t\tinstall_attempts = ADBTRIES\n\t\t\twhile \"Success\" not in ret and install_attempts > 0:\n\t\t\t\tkick_adb_maybe(adbl, fcnt)\n\t\t\t\tvlogger.info( name + \":\" + \"install failed emulator install returned: %s\" % ret )\n\t\t\t\ttime.sleep(VM_POLL_REST)\n\n\t\t\t\t#TODO FIXME, track down why this sometimes stalls forever, seem on SDKs 11 and 14...\n\t\t\t\tret = subprocess.check_output([cmd], shell=True)\n\t\t\t\tinstall_attempts -= 1\n\t\t\t\tif install_attempts <= 0:\n\t\t\t\t\tsyslog.syslog(VMs[m].name + \":\" + \"install failed emulator install returned: %s\" % ret )\n\t\t\t\t\tvlogger.error(VMs[m].name + \":\" + \"install failed emulator install returned: %s\" % ret )\n\t\t\t\t\n\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator install fatal error: %s\" % cmd )\n\t\t\tvlogger.error( formatExceptionInfo())\n\t\t\tsys.exit(1)\n\n\t\t#possible errors:\n\t\t#Error: Could not access the Package Manager. Is the system running?\n\n\t\ttime.sleep(VM_POLL_REST * 3)\n\n\t\t#stimulate\n\t\tdoc = etree.parse( MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \".xml\")\n\t\tpackage = doc.find('package')\n\n\t\t\n\t\tli = libIntent.libIntent(\"localhost\",adbport)\n\t\n\t\t#for each rint\n\t\tfor rint in doc.findall('rint'):\n\t\t\tvlogger.info( name + \" handling \" + str(rint.text))\n\t\t\tli.handleRIntent(str(rint.text))\n\n\t\t#for each permission (actions and rints _should_ catch all these....)\n\t\tfor perm in doc.findall('permission'):\n\t\t\tvlogger.info( name + \" handling \" + str(perm.text))\n\t\t\tli.handlePermission(str(perm.text))\n\n\t\t#for each action\n\t\tfor action in doc.findall('action'):\n\t\t\tvlogger.info( name + \" handling \" + str(action.text))\n\t\t\tli.handleAction(str(action.text))\n\t\t\t#BROADCASTS are done this way\n\t\t\t#cmd = EMUINTENT % ( ADBPATH, \"emulator-\" + str(adbport), \"android.intent.action.BOOT_COMPLETED\")\n\t\t\tcmd = EMUINTENT % ( ADBPATH, \"emulator-\" + str(adbport), str(action.text))\n\t\t\tvlogger.info( name + \":\" + cmd)\n\t\t\ttry:\n\t\t\t\t#TODO check for \"Broadcast completed\" in output, repeat if necessary\n\t\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\t\texcept:\n\t\t\t\tsyslog.syslog(\"app %s error sending intent %s\" % (job['sha256'],str(action.text)))\n\t\t\t\tvlogger.error( name + \":\" + \"emulator intent error: %s\" % cmd )\n\t\t\t\tvlogger.error( name + \":\" + \"emulator intent error: %d\" % ret )\n\t\t\t\t#TODO exit is a little too harsh here, but should probably requeue somehow\n\t\t\t\t#sys.exit(1)\n\t\t\t\t#sys.exit(1)\n\n\t\t#somethings just don't have nice rint or actions\n\t\tli.sendCall()\n\t\ttime.sleep(VM_POLL_REST)\n\t\tli.endAllCalls()\n\n\t\t#open app\n\n\n\t\t# TODO this should not be a for/for loop, the actions shoudl be paired with activities\n\t\tfor activity in doc.findall('activity'):\n\t\t\tfor action in doc.findall('action'):\n\t\t\t\tvlogger.info( name + \": \" + \"################## launching activity \" + str(activity.text))\n\t\t\t\tcmd = EMULAUNCH % ( ADBPATH, \"emulator-\" + str(adbport), str(action.text), str(package.text), str(activity.text))\n\t\t\t\tvlogger.info( name + \":\" + cmd)\n\t\t\t\ttry:\n\t\t\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\t\t\texcept:\n\t\t\t\t\tvlogger.error( name + \":\" + \"emulator launch error: %s\" % cmd )\n\t\t\t\t\tvlogger.error( name + \":\" + \"emulator launch error: %d\" % ret )\n\t\t\t\t\t#TODO exit is a little too harsh here, but should probably requeue somehow\n\t\t\t\t\t#sys.exit(1)\n\n\t\ttime.sleep(VM_POLL_REST * 5)\n\n\t\t#monkey around\n\t\tcmd = EMUMONKEY % ( ADBPATH, \"emulator-\" + str(adbport), str(package.text), random.randint(1,100))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\n\t\ttry:\n\t\t\tret = subprocess.check_output([cmd], shell=True)\n\t\t\tvlogger.info( name + \":\" + \"emulator monkey returned: %s\" % ret )\n#\t\t\tmonkey_attempts = ADBTRIES\n#\t\t\twhile \"Success\" not in ret and monkey_attempts > 0:\n#\t\t\t\tkick_adb_maybe(adbl, fcnt)\n#\t\t\t\tvlogger.info( name + \":\" + \"monkey failed emulator monkey returned: %s\" % ret )\n#\t\t\t\ttime.sleep(VM_POLL_REST)\n#\n#\t\t\t\tret = subprocess.check_output([cmd], shell=True)\n#\t\t\t\tmonkey_attempts -= 1\n#\t\t\t\tif monkey_attempts <= 0:\n#\t\t\t\t\tsyslog.syslog(VMs[m].name + \":\" + \"monkey failed emulator monkey returned: %s\" % ret )\n\t\t\t\t\n\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator monkey fatal error: %s\" % cmd )\n\t\t\tsyslog.syslog(VMs[m].name + \":\" + \"monkey failed emulator monkey error: %s\" % cmd )\n\t\t\tvlogger.error( formatExceptionInfo())\n\t\t\tsys.exit(1)\n\n\t\t#kill\n\t\tcmd = EMUKILL % ( ADBPATH, \"emulator-\" + str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"emulator kill error\")\n\t\t\tsys.exit(1)\n\n\t\t#cleanup\n\t\tif pEmu.poll() is not None:\n\t\t\tvlogger.info( name + \": \" + \"poll is \" + str(pEmu.poll()))\n\t\t\ttry:\t\n\t\t\t\tpEmu.terminate()\n\t\t\texcept:\n\t\t\t\tvlogger.error( name + \": \" + \"pEmu term failed\")\n#TODO\t\tif pLogCat.poll() is not None:\n#TODO\t\t\tpLogCat.terminate()\n\t\tfLogCat.flush()\n\t\tfLogCat.close()\n\t\tfNull.close()\n\t\t\n\t\ttime.sleep(VM_POLL_REST)\n\t\tvlogger.info( name + \":\" + \"...stopping VM \" + VMs[m].name)\n\t\twith vmlock:\t\n\t\t\tVMlocal = VMs[m];\n\t\t\tVMlocal.state = \"Off\"\n\t\t\tVMs[m] = VMlocal;\n\t\n\t\tt2 = time.time()\t\n\n\t\tcomplete_time = time.strftime(\"%Y-%m-%d-%H:%M:%S\", time.gmtime())\n\t\tresults_file = job['sha256'] + \".pcap\"\n\t\tmsdb.updateFinishRun(job['jobuuid'],complete_time,results_file)\n\n\t\t#post process pcap, pretty crude for now, adb uses it's port and port+1; so two prunes\n\t\t#...and it seems that adb uses 5555 regardless of which even port is specified\n\t\toriginalpcap = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \"-orig.pcap\"\n\t\ttmppcap = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \"-temp.pcap\"\n\t\tfinalpcap = MALWAREJOBSBASE + \"/\" + job['jobuuid'] + \"/\" + job['sha256'] + \".pcap\"\n\n\t\t#cmd = \"prune_pcap.sh %s %s %s\" % (os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \"-orig.pcap\",os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \".pcap\", str(adbport))\n\t\tcmd = \"prune_pcap.sh %s %s %s\" % (originalpcap,tmppcap, str(adbport))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"pcap prune error\")\n\t\t\tsys.exit(1)\n\n\t\t#cmd = \"prune_pcap.sh %s %s %s\" % (os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \"-orig.pcap\",os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \".pcap\", str(int(adbport)+1))\n\t\tcmd = \"prune_pcap.sh %s %s %s\" % (tmppcap,finalpcap, str(int(adbport)+1))\n\t\tvlogger.info( name + \":\" + cmd)\n\t\ttry:\n\t\t\tret = subprocess.check_call([cmd], shell=True)\n\t\texcept:\n\t\t\tvlogger.error( name + \":\" + \"pcap prune error\")\n\t\t\tsys.exit(1)\n\n\t\t#cmd = \"prune_pcap.sh %s %s %s\" % (os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \"-orig.pcap\",os.path.dirname(job['fullpath']) + \"/\" + job['sha256']+ \".pcap\", str(5555))\n#\t\tcmd = \"prune_pcap.sh %s %s %s\" % (originalpcap,finalpcap, str(adbport))\n#\t\tvlogger.info( name + \":\" + cmd)\n#\t\ttry:\n#\t\t\tret = subprocess.check_call([cmd], shell=True)\n#\t\texcept:\n#\t\t\tvlogger.error( name + \":\" + \"pcap prune error\")\n#\t\t\tsys.exit(1)\n\n\t\t#TODO unique ip addresses\n\t\t#tshark -r <input.pcap> -T fields -e ip.dst ip.src | sort | uniq\n\n\n\t\tvlogger.info( name + \":\" + \"sample took %s seconds process\" % str(t2 - t1))\n\t\tresults.put(t2-t1)\n\n\telif VMs[m].state in [\"Off\"]:\n\t\tvlogger.info( name + \":\" + VMs[m].name + \"run error: found in state OFF!\")\n\t\trval = False\n\telif VMs[m].state in [\"Ready\"]:\n\t\tvlogger.info( name + \":\" + VMs[m].name + \"run error: is running and not available for new malware\")\n\t\trval = False\n\t\t#if m.name in assignments:\n\t\t#\tif assignments[m.name]['timeout'] <= time.time():\n\t\t#\t\t#do anything you want to wrap up\n\t\t#\t\tjob_post_process(m)\n\t\t#\t\tjob_cleanup(m)\n\t\t#\t\tvm_poweroff(m)\n\t\t#else: # if the machine is running but there is no job assigned to it then kill it\n\t\t#\tpcap_terminate(m)\n\t\t#\tvm_poweroff(m)\n#\telse: #not sure this is relevant...may need to remove it\n#\t\tvm_poweroff(m) #I need to get a list of states that I want to poweroff by default\n\treturn rval", "metadata": "root.runInVM", "header": "['module', '___EOS___']", "index": 221 } ]

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Unused local variable

AppScale/appscale/AppServer/lib/django-1.3/tests/regressiontests/generic_views/base.py

[ { "content": " def test_no_init_kwargs(self):\n \"\"\"\n Test that a view can't be accidentally instantiated before deployment\n \"\"\"\n try:\n view = SimpleView(key='value').as_view()\n self.fail('Should not be able to instantiate a view')\n except AttributeError:\n pass", "metadata": "root.ViewTest.test_no_init_kwargs", "header": "['class', 'ViewTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 65 }, { "content": " def test_no_init_args(self):\n \"\"\"\n Test that a view can't be accidentally instantiated before deployment\n \"\"\"\n try:\n view = SimpleView.as_view('value')\n self.fail('Should not be able to use non-keyword arguments instantiating a view')\n except TypeError:\n pass", "metadata": "root.ViewTest.test_no_init_args", "header": "['class', 'ViewTest', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 75 } ]

[ { "span": "view ", "start_line": 70, "start_column": 12, "end_line": 70, "end_column": 16 }, { "span": "view ", "start_line": 80, "start_column": 12, "end_line": 80, "end_column": 16 } ]

[]

1

true

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Special method has incorrect signature

correl/Transmission-XBMC/resources/lib/basictypes/pythoninterfaces.py

[ { "content": "\tdef __contains__( other ):\n\t\t\"\"\"Determine whether object contains other\"\"\"", "metadata": "root.IObjectContains.__contains__", "header": "['class', 'IObjectContains', '(', 'Interface', ')', ':', '___EOS___']", "index": 19 }, { "content": "\tdef __eq__( other ):\n\t\t\"\"\"Determine whether object == other\"\"\"", "metadata": "root.IObjectEq.__eq__", "header": "['class', 'IObjectEq', '(', 'Interface', ')', ':', '___EOS___']", "index": 27 }, { "content": "\tdef __ne__( other ):\n\t\t\"\"\"Determine whether object != other\"\"\"", "metadata": "root.IObjectNe.__ne__", "header": "['class', 'IObjectNe', '(', 'Interface', ')', ':', '___EOS___']", "index": 34 }, { "content": "\tdef __getitem__( key ):\n\t\t\"\"\"Get sub-item by key or index\"\"\"", "metadata": "root.IObjectGetItem.__getitem__", "header": "['class', 'IObjectGetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 53 }, { "content": "\tdef __setitem__( key, other ):\n\t\t\"\"\"Set sub-item by key or index\"\"\"", "metadata": "root.IObjectSetItem.__setitem__", "header": "['class', 'IObjectSetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 57 }, { "content": "\tdef __delitem__( key ):\n\t\t\"\"\"Delete sub-item by key or index\"\"\"", "metadata": "root.IObjectDelItem.__delitem__", "header": "['class', 'IObjectDelItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 61 }, { "content": "\tdef __len__( ):\n\t\t\"\"\"Return the length as an integer or long\"\"\"", "metadata": "root.IObjectLength.__len__", "header": "['class', 'IObjectLength', '(', 'Interface', ')', ':', '___EOS___']", "index": 66 }, { "content": "\tdef __nonzero__( ):\n\t\t\"\"\"Determine if the object is True (not False)\"\"\"", "metadata": "root.IObjectNonZero.__nonzero__", "header": "['class', 'IObjectNonZero', '(', 'Interface', ')', ':', '___EOS___']", "index": 73 }, { "content": "\tdef __hash__( ):\n\t\t\"\"\"Return the hash as an integer\"\"\"", "metadata": "root.IObjectHash.__hash__", "header": "['class', 'IObjectHash', '(', 'Interface', ')', ':', '___EOS___']", "index": 78 }, { "content": "\tdef __iter__():\n\t\t\"\"\"Return an iterator for the items of this object\"\"\"", "metadata": "root.IObjectIter.__iter__", "header": "['class', 'IObjectIter', '(', 'Interface', ')', ':', '___EOS___']", "index": 83 }, { "content": "\tdef __getitem__( index ):\n\t\t\"\"\"Get sub-item by index\"\"\"", "metadata": "root.ISequenceGetItem.__getitem__", "header": "['class', 'ISequenceGetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 133 }, { "content": "\tdef __setitem__( index, other ):\n\t\t\"\"\"Set sub-item by index\"\"\"", "metadata": "root.ISequenceSetItem.__setitem__", "header": "['class', 'ISequenceSetItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 137 }, { "content": "\tdef __delitem__( index ):\n\t\t\"\"\"Delete sub-item by index\"\"\"", "metadata": "root.ISequenceDelItem.__delitem__", "header": "['class', 'ISequenceDelItem', '(', 'Interface', ')', ':', '___EOS___']", "index": 141 }, { "content": "\tdef __getslice__( start, stop):\n\t\t\"\"\"Get sub-items by index-range\"\"\"", "metadata": "root.ISequenceGetSlice.__getslice__", "header": "['class', 'ISequenceGetSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 146 }, { "content": "\tdef __setslice__( start, stop, other):\n\t\t\"\"\"Set sub-items by index-range\"\"\"", "metadata": "root.ISequenceSetSlice.__setslice__", "header": "['class', 'ISequenceSetSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 150 }, { "content": "\tdef __delslice__( start, stop):\n\t\t\"\"\"Delete sub-items by index-range\"\"\"", "metadata": "root.ISequenceDelSlice.__delslice__", "header": "['class', 'ISequenceDelSlice', '(', 'Interface', ')', ':', '___EOS___']", "index": 154 }, { "content": "\tdef __iter__():\n\t\t\"\"\"Return the object itself to allow for x in Iterator operation\"\"\"", "metadata": "root.IIterator.__iter__", "header": "['class', 'IIterator', '(', 'Interface', ')', ':', '___EOS___']", "index": 211 } ]

[ { "span": "def __contains__( other ):", "start_line": 19, "start_column": 1, "end_line": 19, "end_column": 27 }, { "span": "def __eq__( other ):", "start_line": 27, "start_column": 1, "end_line": 27, "end_column": 21 }, { "span": "def __ne__( other ):", "start_line": 34, "start_column": 1, "end_line": 34, "end_column": 21 }, { "span": "def __getitem__( key ):", "start_line": 53, "start_column": 1, "end_line": 53, "end_column": 24 }, { "span": "def __setitem__( key, other ):", "start_line": 57, "start_column": 1, "end_line": 57, "end_column": 31 }, { "span": "def __delitem__( key ):", "start_line": 61, "start_column": 1, "end_line": 61, "end_column": 24 }, { "span": "def __len__( ):", "start_line": 66, "start_column": 1, "end_line": 66, "end_column": 16 }, { "span": "def __nonzero__( ):", "start_line": 73, "start_column": 1, "end_line": 73, "end_column": 20 }, { "span": "def __hash__( ):", "start_line": 78, "start_column": 1, "end_line": 78, "end_column": 17 }, { "span": "def __iter__():", "start_line": 83, "start_column": 1, "end_line": 83, "end_column": 16 }, { "span": "def __getitem__( index ):", "start_line": 133, "start_column": 1, "end_line": 133, "end_column": 26 }, { "span": "def __setitem__( index, other ):", "start_line": 137, "start_column": 1, "end_line": 137, "end_column": 33 }, { "span": "def __delitem__( index ):", "start_line": 141, "start_column": 1, "end_line": 141, "end_column": 26 }, { "span": "def __getslice__( start, stop):", "start_line": 146, "start_column": 1, "end_line": 146, "end_column": 32 }, { "span": "def __setslice__( start, stop, other):", "start_line": 150, "start_column": 1, "end_line": 150, "end_column": 39 }, { "span": "def __delslice__( start, stop):", "start_line": 154, "start_column": 1, "end_line": 154, "end_column": 32 }, { "span": "def __iter__():", "start_line": 211, "start_column": 1, "end_line": 211, "end_column": 16 } ]

[]

1

true

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Unreachable code

natduca/quickopen/src/info_bar_gtk.py

[ { "content": "# Copyright 2011 Google Inc.\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\nimport gtk\nimport pango\n\nfrom event import *\n\n\n\n\n\n\nif __name__ == \"__main__\" and False:\n w = gtk.Window()\n w.set_size_request(400,-1)\n b = InfoBarGtk()\n b.text = \"blah blah blah\"\n w.add(b)\n w.show_all()\n gtk.main()\n\nif __name__ == \"__main__\" and True:\n w = gtk.Window()\n w.set_size_request(400,-1)\n bbc = InfoBarGtkCollection()\n\n # bb1\n bb = InfoBarGtk(\"blah blah blah\")\n bbc.add_bar(bb)\n\n # bb1\n bb = InfoBarGtk(\"this is informational\")\n bb.set_stock_icon(gtk.STOCK_DIALOG_INFO)\n bbc.add_bar(bb)\n\n # bb1\n bb = InfoBarGtk(\"blah blah blah\")\n bb.add_button(\"Accept\", lambda: True)\n bbc.add_bar(bb)\n\n # bb1\n bb = InfoBarGtk(\"OMG you need to do somethnig\")\n bb.set_stock_icon(gtk.STOCK_DIALOG_WARNING)\n bb.add_button(\"Accept\", lambda: True)\n bb.add_close_button(lambda: True)\n bbc.add_bar(bb)\n\n w.add(bbc)\n w.show_all()\n gtk.main()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "w = gtk.Window()", "start_line": 167, "start_column": 2, "end_line": 167, "end_column": 18 } ]

[]

1

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Unused import

UFAL-DSG/cloud-asr/cloudasr/shared/cloudasr/schema.py

[ { "content": "import random\nimport struct\nimport datetime\nfrom flask.ext.sqlalchemy import SQLAlchemy\nfrom sqlalchemy import Column, String, Text, Integer, Float, DateTime, Boolean, ForeignKey, create_engine, types\nfrom sqlalchemy.orm import sessionmaker, relationship\nfrom sqlalchemy.ext.declarative import declarative_base\nfrom sqlalchemy.dialects.mysql.base import MSBinary\n\ndb = SQLAlchemy()\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class UUID(types.TypeDecorator):\n impl = MSBinary\n\n\n\n", "metadata": "root.UUID", "header": "['module', '___EOS___']", "index": 11 }, { "content": " def __init__(self):\n self.impl.length = 16\n types.TypeDecorator.__init__(self, length=self.impl.length)", "metadata": "root.UUID.__init__", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 14 }, { "content": " def process_bind_param(self, value, dialect=None):\n if value is not None:\n value = int(value)\n return struct.pack('>QQ', (value >> 64), value & ((1 << 64) - 1))\n else:\n return None", "metadata": "root.UUID.process_bind_param", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 18 }, { "content": " def process_result_value(self, value, dialect=None):\n if value:\n (upper, lower) = struct.unpack('>QQ', value)\n return (upper << 64) | lower\n else:\n return None", "metadata": "root.UUID.process_result_value", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 25 }, { "content": " def is_mutable(self):\n return False", "metadata": "root.UUID.is_mutable", "header": "['class', 'UUID', '(', 'types', '.', 'TypeDecorator', ')', ':', '___EOS___']", "index": 32 }, { "content": "class User(db.Model):\n __tablename__ = 'user'\n\n id = Column(UUID, primary_key = True)\n email = Column(String(128))\n name = Column(String(128))\n avatar = Column(String(128))\n transcriptions = relationship('Transcription', backref=\"user\")\n admin = Column(Boolean)\n\n\n\n", "metadata": "root.User", "header": "['module', '___EOS___']", "index": 36 }, { "content": " def is_authenticated(self):\n return True", "metadata": "root.User.is_authenticated", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 46 }, { "content": " def is_active(self):\n return True", "metadata": "root.User.is_active", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 49 }, { "content": " def is_anonymous(self):\n return False", "metadata": "root.User.is_anonymous", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 52 }, { "content": " def get_id(self):\n return unicode(self.id)", "metadata": "root.User.get_id", "header": "['class', 'User', '(', 'db', '.', 'Model', ')', ':', '___EOS___']", "index": 55 }, { "content": "class WorkerType(db.Model):\n __tablename__ = 'worker_type'\n\n id = Column(String(32), primary_key = True)\n lang = Column(String(10))\n name = Column(String(128))\n description = Column(Text)\n visible = Column(Boolean, default = False)\n language_models = relationship('LanguageModel')\n recordings = relationship('Recording')", "metadata": "root.WorkerType", "header": "['module', '___EOS___']", "index": 59 }, { "content": "class LanguageModel(db.Model):\n __tablename__ = 'language_model'\n\n id = Column(Integer, primary_key = True)\n key = Column(String(32))\n name = Column(String(32))\n worker_type = Column(String(32), ForeignKey('worker_type.id'))", "metadata": "root.LanguageModel", "header": "['module', '___EOS___']", "index": 70 }, { "content": "class Recording(db.Model):\n __tablename__ = 'recording'\n\n id = Column(UUID, primary_key = True)\n uuid = Column(UUID)\n part = Column(Integer)\n model = Column(String(32), ForeignKey('worker_type.id'))\n path = Column(String(128))\n url = Column(String(128))\n best_transcription = Column(Text)\n score = Column(Float)\n created = Column(DateTime, default = datetime.datetime.utcnow)\n hypotheses = relationship('Hypothesis')\n transcriptions = relationship('Transcription')", "metadata": "root.Recording", "header": "['module', '___EOS___']", "index": 78 }, { "content": "class Hypothesis(db.Model):\n __tablename__ = 'hypothesis'\n\n id = Column(Integer, primary_key = True)\n recording_id = Column(UUID, ForeignKey('recording.id'))\n text = Column(Text)\n confidence = Column(Float)", "metadata": "root.Hypothesis", "header": "['module', '___EOS___']", "index": 94 }, { "content": "class Transcription(db.Model):\n __tablename__ = 'transcription'\n\n id = Column(Integer, primary_key = True)\n recording_id = Column(UUID, ForeignKey('recording.id'))\n user_id = Column(UUID, ForeignKey('user.id'), nullable = True)\n text = Column(Text)\n created = Column(DateTime, default = datetime.datetime.utcnow)\n has_been_played = Column(Boolean)\n native_speaker = Column(Boolean)\n offensive_language = Column(Boolean)\n not_a_speech = Column(Boolean)", "metadata": "root.Transcription", "header": "['module', '___EOS___']", "index": 103 } ]

[ { "span": "import random", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 13 }, { "span": "from sqlalchemy import Column, String, Text, Integer, Float, DateTime, Boolean, ForeignKey, create_engine, types", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 112 }, { "span": "from sqlalchemy.orm import sessionmaker, relationship", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 53 }, { "span": "from sqlalchemy.ext.declarative import declarative_base", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 55 } ]

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"\\u\\u\\uNEWLINE\\u\\u\\u_", "has", "\\u", "bee", "n", "\\u", "played", "_", "=_", "Column_", "(_", "Boolean_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "nativ", "e\\u", "speaker_", "=_", "Column_", "(_", "Boolean_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "offen", "sive", "\\u", "language_", "=_", "Column_", "(_", "Boolean_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "not", "\\u", "a", "\\u", "speech_", "=_", "Column_", "(_", "Boolean_", ")_" ]

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Except block handles 'BaseException'

ioam/holoviews/holoviews/core/operation.py

[ { "content": "\"\"\"\nOperations manipulate Elements, HoloMaps and Layouts, typically for\nthe purposes of analysis or visualization.\n\"\"\"\nfrom functools import reduce\nimport param\n\ntry:\n from itertools import izip as zip\nexcept:\n pass\n\nfrom .dimension import ViewableElement\nfrom .element import Element, HoloMap, GridSpace, Collator\nfrom .layout import Layout\nfrom .overlay import NdOverlay, Overlay\nfrom .spaces import DynamicMap\nfrom .traversal import unique_dimkeys\nfrom . import util\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "except:", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 7 } ]

[]

1

true

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Unused local variable

amarandon/smeuhsocial/apps/account/forms.py

[ { "content": " def clean_username(self):\n if not alnum_re.search(self.cleaned_data[\"username\"]):\n raise forms.ValidationError(\n _(\"Usernames can only contain letters, numbers and underscores.\"))\n try:\n user = User.objects.get(\n username__iexact=self.cleaned_data[\"username\"])\n except User.DoesNotExist:\n return self.cleaned_data[\"username\"]\n raise forms.ValidationError(\n _(\"This username is already taken. Please choose another.\"))", "metadata": "root.SignupForm.clean_username", "header": "['class', 'SignupForm', '(', 'GroupForm', ')', ':', '___EOS___']", "index": 142 } ]

[ { "span": "user ", "start_line": 147, "start_column": 12, "end_line": 147, "end_column": 16 } ]

[]

1

true

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Unused local variable

sahana/eden/modules/s3db/msg.py

[ { "content": " def model(self):\n\n T = current.T\n db = current.db\n\n UNKNOWN_OPT = current.messages.UNKNOWN_OPT\n\n configure = self.configure\n define_table = self.define_table\n\n # Message priority\n msg_priority_opts = {3 : T(\"High\"),\n 2 : T(\"Medium\"),\n 1 : T(\"Low\"),\n }\n\n # ---------------------------------------------------------------------\n # Message Super Entity - all Inbound & Outbound Messages\n #\n\n message_types = Storage(msg_email = T(\"Email\"),\n msg_facebook = T(\"Facebook\"),\n msg_rss = T(\"RSS\"),\n msg_sms = T(\"SMS\"),\n msg_twitter = T(\"Twitter\"),\n msg_twitter_result = T(\"Twitter Search Results\"),\n )\n\n tablename = \"msg_message\"\n self.super_entity(tablename, \"message_id\",\n message_types,\n # Knowing which Channel Incoming Messages\n # came in on allows correlation to Outbound\n # messages (campaign_message, deployment_alert, etc)\n self.msg_channel_id(),\n s3_datetime(default=\"now\"),\n Field(\"body\", \"text\",\n label = T(\"Message\"),\n ),\n Field(\"from_address\",\n label = T(\"From\"),\n ),\n Field(\"to_address\",\n label = T(\"To\"),\n ),\n Field(\"inbound\", \"boolean\",\n default = False,\n label = T(\"Direction\"),\n represent = lambda direction: \\\n (direction and [T(\"In\")] or \\\n [T(\"Out\")])[0],\n ),\n )\n\n # @todo: make lazy_table\n table = db[tablename]\n table.instance_type.readable = True\n table.instance_type.writable = True\n\n configure(tablename,\n list_fields = [\"instance_type\",\n \"from_address\",\n \"to_address\",\n \"body\",\n \"inbound\",\n ],\n )\n\n # Reusable Field\n message_represent = S3Represent(lookup=tablename, fields=[\"body\"])\n message_id = S3ReusableField(\"message_id\", \"reference %s\" % tablename,\n ondelete = \"RESTRICT\",\n represent = message_represent,\n requires = IS_EMPTY_OR(\n IS_ONE_OF_EMPTY(db, \"msg_message.id\")),\n )\n\n self.add_components(tablename,\n msg_attachment = \"message_id\",\n deploy_response = \"message_id\",\n )\n\n # ---------------------------------------------------------------------\n # Outbound Messages\n #\n\n # Show only the supported messaging methods\n MSG_CONTACT_OPTS = current.msg.MSG_CONTACT_OPTS\n\n # Maximum number of retries to send a message\n MAX_SEND_RETRIES = current.deployment_settings.get_msg_max_send_retries()\n\n # Valid message outbox statuses\n MSG_STATUS_OPTS = {1 : T(\"Unsent\"),\n 2 : T(\"Sent\"),\n 3 : T(\"Draft\"),\n 4 : T(\"Invalid\"),\n 5 : T(\"Failed\"),\n }\n\n opt_msg_status = S3ReusableField(\"status\", \"integer\",\n notnull=True,\n requires = IS_IN_SET(MSG_STATUS_OPTS,\n zero=None),\n default = 1,\n label = T(\"Status\"),\n represent = lambda opt: \\\n MSG_STATUS_OPTS.get(opt,\n UNKNOWN_OPT))\n\n # Outbox - needs to be separate to Message since a single message\n # sent needs different outbox entries for each recipient\n tablename = \"msg_outbox\"\n define_table(tablename,\n # FK not instance\n message_id(),\n # Person/Group to send the message out to:\n self.super_link(\"pe_id\", \"pr_pentity\"),\n # If set used instead of picking up from pe_id:\n Field(\"address\"),\n Field(\"contact_method\", length=32,\n default = \"EMAIL\",\n label = T(\"Contact Method\"),\n represent = lambda opt: \\\n MSG_CONTACT_OPTS.get(opt, UNKNOWN_OPT),\n requires = IS_IN_SET(MSG_CONTACT_OPTS,\n zero=None),\n ),\n opt_msg_status(),\n # Used to loop through a PE to get it's members\n Field(\"system_generated\", \"boolean\",\n default = False,\n ),\n # Give up if we can't send after MAX_RETRIES\n Field(\"retries\", \"integer\",\n default = MAX_SEND_RETRIES,\n readable = False,\n writable = False,\n ),\n *s3_meta_fields())\n\n configure(tablename,\n list_fields = [\"id\",\n \"message_id\",\n \"pe_id\",\n \"status\",\n ],\n orderby = \"msg_outbox.created_on desc\",\n )\n\n # ---------------------------------------------------------------------\n # Pass names back to global scope (s3.*)\n return dict(msg_message_id = message_id,\n msg_message_represent = message_represent,\n )", "metadata": "root.S3MessageModel.model", "header": "['class', 'S3MessageModel', '(', 'S3Model', ')', ':', '___EOS___']", "index": 363 }, { "content": " def model(self):\n\n T = current.T\n db = current.db\n\n configure = self.configure\n define_table = self.define_table\n set_method = self.set_method\n\n # ---------------------------------------------------------------------\n # Twitter Channel\n #\n password_widget = S3PasswordWidget()\n tablename = \"msg_twitter_channel\"\n define_table(tablename,\n #Instance\n self.super_link(\"channel_id\", \"msg_channel\"),\n # @ToDo: Allow different Twitter accounts for different PEs (Orgs / Teams)\n #self.pr_pe_id(),\n Field(\"name\",\n label = T(\"Name\"),\n ),\n Field(\"description\",\n label = T(\"Description\"),\n ),\n Field(\"enabled\", \"boolean\",\n default = True,\n label = T(\"Enabled?\"),\n represent = s3_yes_no_represent,\n ),\n Field(\"login\", \"boolean\",\n default = False,\n label = T(\"Use for Login?\"),\n represent = s3_yes_no_represent,\n ),\n Field(\"twitter_account\",\n label = T(\"Twitter Account\"),\n ),\n # Get these from https://apps.twitter.com\n Field(\"consumer_key\", \"password\",\n label = T(\"Consumer Key\"),\n widget = password_widget,\n ),\n Field(\"consumer_secret\", \"password\",\n label = T(\"Consumer Secret\"),\n widget = password_widget,\n ),\n Field(\"access_token\", \"password\",\n label = T(\"Access Token\"),\n widget = password_widget,\n ),\n Field(\"access_token_secret\", \"password\",\n label = T(\"Access Token Secret\"),\n widget = password_widget,\n ),\n *s3_meta_fields())\n\n configure(tablename,\n onaccept = self.twitter_channel_onaccept,\n #onvalidation = self.twitter_channel_onvalidation\n super_entity = \"msg_channel\",\n )\n\n set_method(\"msg\", \"twitter_channel\",\n method = \"enable\",\n action = self.msg_channel_enable_interactive)\n\n set_method(\"msg\", \"twitter_channel\",\n method = \"disable\",\n action = self.msg_channel_disable_interactive)\n\n set_method(\"msg\", \"twitter_channel\",\n method = \"poll\",\n action = self.msg_channel_poll)\n\n # ---------------------------------------------------------------------\n # Twitter Messages: InBox & Outbox\n #\n tablename = \"msg_twitter\"\n define_table(tablename,\n # Instance\n self.super_link(\"message_id\", \"msg_message\"),\n self.msg_channel_id(),\n s3_datetime(default = \"now\",\n label = T(\"Posted on\"),\n ),\n Field(\"body\", length=140,\n label = T(\"Message\"),\n ),\n Field(\"from_address\", #notnull=True,\n label = T(\"From\"),\n represent = self.twitter_represent,\n requires = IS_NOT_EMPTY(),\n ),\n Field(\"to_address\",\n label = T(\"To\"),\n represent = self.twitter_represent,\n ),\n Field(\"inbound\", \"boolean\",\n default = False,\n label = T(\"Direction\"),\n represent = lambda direction: \\\n (direction and [T(\"In\")] or \\\n [T(\"Out\")])[0],\n ),\n Field(\"msg_id\", # Twitter Message ID\n readable = False,\n writable = False,\n ),\n *s3_meta_fields())\n\n configure(tablename,\n list_fields = [\"id\",\n #\"priority\",\n #\"category\",\n \"body\",\n \"from_address\",\n \"date\",\n #\"location_id\",\n ],\n #orderby = ~table.priority,\n super_entity = \"msg_message\",\n )\n\n # ---------------------------------------------------------------------\n return {}", "metadata": "root.S3TwitterModel.model", "header": "['class', 'S3TwitterModel', '(', 'S3Model', ')', ':', '___EOS___']", "index": 1710 }, { "content": " @staticmethod\n def twitter_search_poll(r, **attr):\n \"\"\"\n Perform a Search of Twitter\n\n S3Method for interactive requests\n \"\"\"\n\n id = r.id\n tablename = r.tablename\n current.s3task.async(\"msg_twitter_search\", args=[id])\n current.session.confirmation = \\\n current.T(\"The search request has been submitted, so new messages should appear shortly - refresh to see them\")\n # Filter results to this Search\n redirect(URL(f=\"twitter_result\",\n vars={\"~.search_id\": id}))", "metadata": "root.S3TwitterSearchModel.twitter_search_poll", "header": "['class', 'S3TwitterSearchModel', '(', 'S3ChannelModel', ')', ':', '___EOS___']", "index": 2070 }, { "content": " @staticmethod\n def twitter_keygraph(r, **attr):\n \"\"\"\n Prcoess Search Results with KeyGraph\n\n S3Method for interactive requests\n \"\"\"\n\n tablename = r.tablename\n current.s3task.async(\"msg_process_keygraph\", args=[r.id])\n current.session.confirmation = \\\n current.T(\"The search results are now being processed with KeyGraph\")\n # @ToDo: Link to KeyGraph results\n redirect(URL(f=\"twitter_result\"))", "metadata": "root.S3TwitterSearchModel.twitter_keygraph", "header": "['class', 'S3TwitterSearchModel', '(', 'S3ChannelModel', ')', ':', '___EOS___']", "index": 2088 } ]

[ { "span": "msg_priority_opts ", "start_line": 374, "start_column": 8, "end_line": 374, "end_column": 25 }, { "span": "db ", "start_line": 1713, "start_column": 8, "end_line": 1713, "end_column": 10 }, { "span": "tablename ", "start_line": 2079, "start_column": 8, "end_line": 2079, "end_column": 17 }, { "span": "tablename ", "start_line": 2096, "start_column": 8, "end_line": 2096, "end_column": 17 } ]

[]

1

true

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Variable defined multiple times

StackStorm/st2/st2reactor/st2reactor/rules/engine.py

[ { "content": " def get_matching_rules_for_trigger(self, trigger_instance):\n trigger = trigger_instance.trigger\n trigger = get_trigger_db_by_ref(trigger_instance.trigger)\n rules = Rule.query(trigger=trigger_instance.trigger, enabled=True)\n LOG.info('Found %d rules defined for trigger %s (type=%s)', len(rules), trigger['name'],\n trigger['type'])\n matcher = RulesMatcher(trigger_instance=trigger_instance,\n trigger=trigger, rules=rules)\n\n matching_rules = matcher.get_matching_rules()\n LOG.info('Matched %s rule(s) for trigger_instance %s (type=%s)', len(matching_rules),\n trigger['name'], trigger['type'])\n return matching_rules", "metadata": "root.RulesEngine.get_matching_rules_for_trigger", "header": "['class', 'RulesEngine', '(', 'object', ')', ':', '___EOS___']", "index": 35 } ]

[ { "span": "trigger ", "start_line": 36, "start_column": 8, "end_line": 36, "end_column": 15 } ]

[ { "span": "trigger ", "start_line": 37, "start_column": 8, "end_line": 37, "end_column": 15 } ]

1

true

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[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 2, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Unused local variable

ioflo/ioflo/ioflo/trim/interior/plain/test/testSimulating.py

[ { "content": "def TestSalinity():\n \"\"\" \"\"\"\n\n #clear registries\n storing.Store.Clear()\n #deeding.Deed.Clear()\n doing.Doer.Clear()\n\n store = storing.Store(name = 'Test')\n\n print(\"\\nTesting Salinity Sensor Front Simulator\")\n sim = SalinitySensorSimulator(name = 'simulatorSensorSalinity', store = store,\n group = 'simulator.sensor.salinity', output = 'ctd',\n input = 'state.position',\n parms = dict(track = 45.0, north = 0.0, east = 0.0,\n middle = 32.0, spread = 4.0, rising = True, width = 500.0))\n\n output = store.fetch('ctd').update(salinity = 32.0)\n store.expose()\n sim._expose()\n\n for k in range(1, 100):\n print(\"\")\n store.advanceStamp(0.125)\n\n input = store.fetch('state.position').update(north = k * -50.0, east = 0.0)\n sim.update()\n sim._expose()", "metadata": "root.TestSalinity", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def TestMotion():\n \"\"\"\n\n \"\"\"\n #clear registries\n storing.Store.Clear()\n #deeding.Deed.Clear()\n doing.Doer.Clear()\n\n store = storing.Store(name = 'Test')\n #CreateActions(store)\n\n\n print(\"\\nTesting Motion Sim Controller\")\n simulator = SimulatorMotionUuv(name = 'simulatorMotionTest', store = store,\n group = 'simulator.motion.test',\n speed = 'state.speed', speedRate = 'state.speedRate',\n depth = 'state.depth', depthRate = 'state.depthRate',\n pitch = 'state.pitch', pitchRate = 'state.pitchRate',\n altitude = 'state.altitude',\n heading = 'state.heading', headingRate = 'state.headingRate',\n position = 'state.position',\n rpm = 'goal.rpm', stern = 'goal.stern', rudder = 'goal.rudder',\n current = 'scenario.current', bottom = 'scenario.bottom',\n prevPosition = 'state.position',\n parms = dict(rpmLimit = 1500.0, sternLimit = 20.0, rudderLimit = 20.0,\n gs = 0.0025, gpr = -0.5, ghr = -0.5))\n\n store.expose()\n\n rpm = store.fetch('goal.rpm').update(value = 500.0)\n stern = store.fetch('goal.stern').update(value = 0.0)\n rudder = store.fetch('goal.rudder').update(value = 0.0)\n current = store.fetch('scenario.current').update(north = 0.0, east = 0.0)\n bottom = store.fetch('scenario.bottom').update(value = 50.0)\n prevPosition = store.fetch('scenario.startposition').update(north = 0.0, east = 0.0)\n\n simulator.restart()\n simulator._expose()\n store.advanceStamp(0.125)\n simulator.update()\n simulator._expose()", "metadata": "root.TestMotion", "header": "['module', '___EOS___']", "index": 33 }, { "content": "def Test():\n \"\"\"Module Common self test\n\n \"\"\"\n\n #clear registries\n print(\"\\nTesting Controllers\\n\")\n storing.Store.Clear()\n #deeding.Deed.Clear()\n doing.Doer.Clear()\n\n store = storing.Store(name = 'Test')\n store.expose()\n\n\n current = store.fetch('scenario.current').update(north = 0.0, east = 0.0)\n bottom = store.fetch('scenario.bottom').update(value = 50.0)\n prevPosition = store.fetch('state.position').update(north = 0.0, east = 0.0)\n\n headinggoal = store.fetch('goal.heading').update(value = 45.0)\n depthgoal = store.fetch('goal.depth').update(value = 5.0)\n speedgoal = store.fetch('goal.speed').update(value = 2.0)\n duration = 10.0\n\n simulatorMotionUuv.restart()\n\n controllerPidSpeed._expose()\n controllerPidHeading._expose()\n controllerPidDepth._expose()\n controllerPidPitch._expose()\n simulatorMotionUuv._expose()\n\n while (store.stamp <= duration):\n print(\"\")\n controllerPidSpeed.action()\n controllerPidHeading.action()\n controllerPidDepth.action()\n controllerPidPitch.action()\n simulatorMotionUuv.action()\n simulatorMotionUuv._expose()\n\n store.advanceStamp(0.125)", "metadata": "root.Test", "header": "['module', '___EOS___']", "index": 78 } ]

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Unused import

lisa-lab/pylearn2/pylearn2/datasets/tests/test_utlc.py

[ { "content": "from __future__ import print_function\n\nimport unittest\n\nimport numpy\nimport scipy.sparse\n\nfrom pylearn2.testing.skip import skip_if_no_data\nimport pylearn2.datasets.utlc as utlc\n\n\n\n\n# @unittest.skip(\"Slow and needs >8 GB of RAM\")\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def test_ule():\n skip_if_no_data()\n # Test loading of transfer data\n train, valid, test, transfer = utlc.load_ndarray_dataset(\"ule\",\n normalize=True,\n transfer=True)\n assert train.shape[0] == transfer.shape[0]", "metadata": "root.test_ule", "header": "['module', '___EOS___']", "index": 11 }, { "content": "def test_all_utlc():\n skip_if_no_data()\n # not testing rita, because it requires a lot of memorz and is slow\n for name in ['avicenna', 'harry', 'ule']:\n print(\"Loading \", name)\n train, valid, test = utlc.load_ndarray_dataset(name, normalize=True)\n print(\"dtype, max, min, mean, std\")\n print(train.dtype, train.max(), train.min(), train.mean(), train.std())\n assert isinstance(train, numpy.ndarray)\n assert isinstance(valid, numpy.ndarray)\n assert isinstance(test, numpy.ndarray)\n assert train.shape[1] == test.shape[1] == valid.shape[1]", "metadata": "root.test_all_utlc", "header": "['module', '___EOS___']", "index": 21 }, { "content": "def test_sparse_ule():\n skip_if_no_data()\n # Test loading of transfer data\n train, valid, test, transfer = utlc.load_sparse_dataset(\"ule\",\n normalize=True,\n transfer=True)\n assert train.shape[0] == transfer.shape[0]", "metadata": "root.test_sparse_ule", "header": "['module', '___EOS___']", "index": 35 }, { "content": "def test_all_sparse_utlc():\n skip_if_no_data()\n for name in ['harry', 'terry', 'ule']:\n print(\"Loading sparse \", name)\n train, valid, test = utlc.load_sparse_dataset(name, normalize=True)\n nb_elem = numpy.prod(train.shape)\n mi = train.data.min()\n ma = train.data.max()\n mi = min(0, mi)\n ma = max(0, ma)\n su = train.data.sum()\n mean = float(su) / nb_elem\n print(name, \"dtype, max, min, mean, nb non-zero, nb element, %sparse\")\n print(train.dtype, ma, mi, mean, train.nnz, end='')\n print(nb_elem, (nb_elem - float(train.nnz)) / nb_elem)\n print(name, \"max, min, mean, std (all stats on non-zero element)\")\n print(train.data.max(), train.data.min(), end='')\n print(train.data.mean(), train.data.std())\n assert scipy.sparse.issparse(train)\n assert scipy.sparse.issparse(valid)\n assert scipy.sparse.issparse(test)\n assert train.shape[1] == test.shape[1] == valid.shape[1]", "metadata": "root.test_all_sparse_utlc", "header": "['module', '___EOS___']", "index": 44 } ]

[ { "span": "import unittest", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 15 } ]

[]

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Unused local variable

soft-matter/pims/pims/tests/test_bioformats.py

[ { "content": " def test_getting_slice(self):\n self.check_skip()\n tmp = list(self.v[0:2])\n frame0, frame1 = tmp", "metadata": "root._image_series.test_getting_slice", "header": "['class', '_image_series', '(', '_image_single', ')', ':', '___EOS___']", "index": 72 } ]

[ { "span": "frame0,", "start_line": 75, "start_column": 8, "end_line": 75, "end_column": 14 }, { "span": "frame1 ", "start_line": 75, "start_column": 16, "end_line": 75, "end_column": 22 } ]

[]

1

true

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Unused import

nigelsmall/httpstream/setup.py

[ { "content": "#!/usr/bin/env python\n# -*- coding: utf-8 -*-\n\n# Copyright 2012-2015 Nigel Small\n#\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\n\n\"\"\"\nHTTPStream is an HTTP client library for Python that is designed to allow\nincremental receipt and handling of web content.\n\"\"\"\n\n\ntry:\n from setuptools import setup\n from setuptools.extension import Extension\nexcept ImportError:\n from distutils.core import setup\n from distutils.extension import Extension\n\nfrom httpstream import __author__, __email__, __license__, __version__\n\n\nsetup(\n name=\"httpstream\",\n version=__version__,\n description=__doc__,\n long_description=open(\"README.rst\").read(),\n author=__author__,\n author_email=__email__,\n url=\"http://nigelsmall.com/httpstream\",\n packages=[\n \"httpstream\",\n\t\"httpstream.packages\",\n\t\"httpstream.packages.urimagic\",\n ],\n install_requires=[\n \"jsonstream>=1.0.0\",\n ],\n license=__license__,\n classifiers=[\n \"Development Status :: 5 - Production/Stable\",\n \"Intended Audience :: Developers\",\n \"License :: OSI Approved :: Apache Software License\",\n \"Operating System :: OS Independent\",\n \"Programming Language :: Python :: 2.7\",\n \"Programming Language :: Python :: 3.3\",\n \"Topic :: Internet :: WWW/HTTP\",\n \"Topic :: Software Development\",\n ],\n zip_safe=False,\n)\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "from setuptools.extension import Extension", "start_line": 26, "start_column": 4, "end_line": 26, "end_column": 46 }, { "span": "from distutils.extension import Extension", "start_line": 29, "start_column": 4, "end_line": 29, "end_column": 45 } ]

[]

1

false

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Except block handles 'BaseException'

pytest-dev/pytest/_pytest/unittest.py

[ { "content": " def _addexcinfo(self, rawexcinfo):\n # unwrap potential exception info (see twisted trial support below)\n rawexcinfo = getattr(rawexcinfo, '_rawexcinfo', rawexcinfo)\n try:\n excinfo = _pytest._code.ExceptionInfo(rawexcinfo)\n except TypeError:\n try:\n try:\n l = traceback.format_exception(*rawexcinfo)\n l.insert(0, \"NOTE: Incompatible Exception Representation, \"\n \"displaying natively:\\n\\n\")\n pytest.fail(\"\".join(l), pytrace=False)\n except (pytest.fail.Exception, KeyboardInterrupt):\n raise\n except:\n pytest.fail(\"ERROR: Unknown Incompatible Exception \"\n \"representation:\\n%r\" %(rawexcinfo,), pytrace=False)\n except KeyboardInterrupt:\n raise\n except pytest.fail.Exception:\n excinfo = _pytest._code.ExceptionInfo()\n self.__dict__.setdefault('_excinfo', []).append(excinfo)", "metadata": "root.TestCaseFunction._addexcinfo", "header": "['class', 'TestCaseFunction', '(', 'pytest', '.', 'Function', ')', ':', '___EOS___']", "index": 98 } ]

[ { "span": "except:", "start_line": 112, "start_column": 16, "end_line": 112, "end_column": 23 } ]

[]

1

true

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Implicit string concatenation in a list

seanthegeek/phishforall/client/search.py

[ { "content": "from os import path\ntry:\n from os import scandir, walk\nexcept ImportError:\n from scandir import scandir, walk\n\nextensions = dict(documents=[\n \"pdf\",\n \"rtf\",\n \"doc\",\n \"dot\",\n \"docx\",\n \"docm\",\n \"dotm\",\n \"docb\",\n \"xls\",\n \"xlt\",\n \"xlm\",\n \"xlsx\",\n \"xlsm\",\n \"xltx\",\n \"xltm\",\n \"xlsb\",\n \"xla\",\n \"xlam\",\n \"xll\",\n \"xlw\",\n \"ppt\",\n \"pot\",\n \"ppt\",\n \"pps\",\n \"pptx\"\n \"pptm\",\n \"potx\",\n \"potm\",\n \"ppam\",\n \"ppsx\",\n \"ppsm\",\n \"sldx\",\n \"sdm\",\n \"mpd\",\n \"mpp\",\n \"mpt\",\n \"mpc\",\n \"mpv\",\n \"mxm\",\n \"vsd\",\n \"vsdx\",\n \"odt\",\n \"ott\",\n \"odm\",\n \"oth\",\n \"ods\",\n \"ots\",\n \"odg\",\n \"otg\",\n \"cdp\",\n \"otp\",\n \"odf\",\n \"oxt\"\n], plain_text=[\n \"txt\",\n \"csv\",\n \"html\"\n], databases=[\n \"db\",\n \"odb\",\n \"sqlite\",\n \"sql\",\n \"db3\",\n \"dbf\",\n \"sdb\",\n \"ibd\",\n \"db-journal\",\n \"db3\",\n \"dbf\",\n \"myd\",\n \"rsd\",\n \"sdf\",\n \"s3db\",\n \"ade\",\n \"adp\",\n \"adn\",\n \"accdb\",\n \"accdr\",\n \"accdt\"\n \"accda\"\n \"mdb\",\n \"cdb\",\n \"mda\",\n \"mda\",\n \"mdn\",\n \"mdt\",\n \"mdw\",\n \"mdf\",\n \"mde\",\n \"accde\",\n \"mam\",\n \"maq\",\n \"mar\",\n \"mat\",\n \"maf\"\n], images=[\n \"jpg\",\n \"jpeg\",\n \"exif\",\n \"tiff\",\n \"gif\",\n \"bmp\",\n \"png\"\n \"ppm\",\n \"pgm\",\n \"pbm\",\n \"pnm\",\n \"webp\",\n \"bgp\",\n \"svg\",\n \"psd\"\n], audio=[\n \"3gp\",\n \"act\",\n \"aiff\",\n \"acc\",\n \"ape\",\n \"au\",\n \"awb\",\n \"dct\",\n \"dvf\",\n \"flac\",\n \"gsm\",\n \"iklax\",\n \"ivs\",\n \"m4a\",\n \"m4p\",\n \"mp3\",\n \"mpc\",\n \"mpc\",\n \"msv\",\n \"ogg\",\n \"oga\",\n \"opus\",\n \"ra\",\n \"rm\",\n \"sln\",\n \"vox\",\n \"wav\",\n \"wma\",\n \"wv\"\n], video=[\n \"webm\",\n \"flv\",\n \"vob\",\n \"ogv\",\n \"ogg\",\n \"drc\",\n \"gifv\",\n \"mng\",\n \"avi\",\n \"mov\",\n \"qt\",\n \"wmv\",\n \"rm\",\n \"rmvb\",\n \"asf\",\n \"mp4\",\n \"m4p\",\n \"m4v\",\n \"mpg\",\n \"mp2\",\n \"mpeg\",\n \"mpe\",\n \"mpv\",\n \"mpg\",\n \"mpeg\",\n \"m2v\",\n \"m4v\",\n \"svi\",\n \"3gp\",\n \"mxf\",\n \"nsv\",\n \"f4v\",\n \"f4p\",\n \"f4a\",\n \"f4b\"\n], archives=[\n \"zip\",\n \"rar\",\n \"ace\",\n \"7z\",\n \"tar\"\n \"gz\",\n \"bz2\",\n \"iso\",\n \"dmg\"\n],emails=[\n \"msg\",\n \"eml\",\n \"pst\"\n], p2p=[\n \"torrent\"\n], pki=[\n \"key\",\n \"csr\",\n \"pem\",\n \"p7b\"\n], exes=[\n \"exe\",\n \"com\",\n \"msi\",\n \"bat\",\n \"ps1\",\n \"sh\",\n \"pkg\"\n], cad=[\n \"hpgl\",\n \"igs\",\n \"step\",\n \"stp\",\n \"fas\",\n\n], source=[\n \"h\",\n \"c\",\n \"cpp\"\n \"java\",\n \"asp\",\n \"aspx\",\n \"vcproj\",\n \"vbw\",\n \"cs\",\n \"fs\",\n \"bat\",\n \"vbs\",\n \"csx\",\n \"ps1\",\n \"cgi\",\n \"lua\",\n \"pl\",\n \"pm\",\n \"prl\",\n \"py\",\n \"axd\",\n \"php\",\n \"php3\",\n \"json\",\n \"do\",\n \"js\",\n \"css\",\n \"html\",\n \"asm\",\n \"asi\",\n \"sh\"\n]\n)\n\nall_extensions = []\n\nfor ext_type in extensions:\n all_extensions += extensions[ext_type]\n\nall_extensions = set(all_extensions)\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "\"pptx\"\n \"pptm\",", "start_line": 31, "start_column": 4, "end_line": 32, "end_column": 10 }, { "span": "\"accdt\"\n \"accda\"\n \"mdb\",", "start_line": 85, "start_column": 4, "end_line": 87, "end_column": 9 }, { "span": "\"png\"\n \"ppm\",", "start_line": 109, "start_column": 4, "end_line": 110, "end_column": 9 }, { "span": "\"tar\"\n \"gz\",", "start_line": 189, "start_column": 4, "end_line": 190, "end_column": 8 }, { "span": "\"cpp\"\n \"java\",", "start_line": 223, "start_column": 4, "end_line": 224, "end_column": 10 } ]

[]

1

true

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Except block handles 'BaseException'

OpenMDAO/OpenMDAO-Framework/openmdao.main/src/openmdao/main/assembly.py

[ { "content": " def _connect(self, src, dest):\n \"\"\"Handle one connection destination. This should only be called via\n the connect() function, never directly.\n \"\"\"\n try:\n try:\n srcexpr, destexpr = self._check_connect(src, dest)\n\n self._connections.append((srcexpr, destexpr))\n\n destval = destexpr.evaluate()\n if isinstance(destval, ndarray) and destval.size == 0:\n destexpr.set(srcexpr.evaluate(), self)\n\n self._check_dest(srcexpr, destexpr)\n\n except AttributeError as err:\n exc_type, value, traceback = sys.exc_info()\n\n invalid_vars = srcexpr.get_unresolved() + destexpr.get_unresolved()\n parts = invalid_vars[0].rsplit('.', 1)\n\n parent = repr(self.name) if self.name else 'top level assembly'\n vname = repr(parts[0])\n\n if len(parts) > 1:\n parent = repr(parts[0])\n vname = repr(parts[1])\n\n msg = \"{parent} has no variable {vname}\"\n msg = msg.format(parent=parent, vname=vname)\n\n raise exc_type, exc_type(msg), traceback\n except:\n info = sys.exc_info()\n self.reraise_exception(\"Can't connect '%s' to '%s': \" %\n (src, dest), info)\n\n self.config_changed()", "metadata": "root.Assembly._connect", "header": "['class', 'Assembly', '(', 'Component', ')', ':', '___EOS___']", "index": 595 }, { "content": " def setup_depgraph(self, dgraph=None):\n # create our depgraph\n self._depgraph = DependencyGraph()\n\n # add all of the components and their var nodes, and any of\n # our own variables as boundary var nodes.\n for name in self.list_inputs():\n self._depgraph.add_boundary_var(self, name,\n iotype='in')\n\n for name in self.list_outputs():\n self._depgraph.add_boundary_var(self, name,\n iotype='out')\n\n for cname in self.list_containers():\n obj = getattr(self, cname)\n if cname not in self._depgraph and has_interface(obj, IComponent):\n self._depgraph.add_component(cname, obj)\n\n # add our connections to the graph. Some connections, e.g.,\n # connections with unit conversions and connections involving\n # multivariable source expressions, will require the creation of\n # PseudoComponents. These must also be represented in the graph.\n for srcexpr, destexpr in self._connections:\n src = srcexpr.text\n dest = destexpr.text\n try:\n pcomp_type = self._needs_pseudo(srcexpr, destexpr)\n if pcomp_type:\n if pcomp_type == 'units':\n pseudocomp = UnitConversionPComp(self, srcexpr, destexpr,\n pseudo_type=pcomp_type)\n else:\n pseudocomp = PseudoComponent(self, srcexpr, destexpr,\n pseudo_type=pcomp_type)\n pseudocomp.activate(self)\n else:\n pseudocomp = None\n self._depgraph.check_connect(src, dest)\n dcomps = destexpr.get_referenced_compnames()\n scomps = srcexpr.get_referenced_compnames()\n for dname in dcomps:\n if dname in scomps:\n raise RuntimeError(\"Both refer to the same component.\")\n for cname in chain(dcomps, scomps):\n comp = getattr(self, cname)\n if has_interface(comp, IComponent):\n comp.config_changed(update_parent=False)\n\n for vname in chain(srcexpr.get_referenced_varpaths(copy=False),\n destexpr.get_referenced_varpaths(copy=False)):\n if not self.contains(vname):\n raise AttributeError(\"Can't find '%s'\" % vname)\n\n self._depgraph.connect(self, src, dest)\n except:\n self.reraise_exception(\"Can't connect '%s' to '%s': \" %\n (src, dest), sys.exc_info())\n\n # add connections for params, constraints, etc.\n for cname in self.list_containers():\n obj = getattr(self, cname)\n if hasattr(obj, 'get_parameters'):\n for param in obj.get_parameters().values():\n self._depgraph.add_param(obj.name, tuple(param.targets))\n\n if hasattr(obj, 'get_constraints'):\n for constraint in obj.get_constraints().values():\n constraint.activate(obj)\n\n if hasattr(obj, 'get_2sided_constraints'):\n for constraint in obj.get_2sided_constraints().values():\n constraint.activate(obj)\n\n if hasattr(obj, 'get_objectives'):\n for objective in obj.get_objectives().values():\n objective.activate(obj)\n\n if hasattr(obj, 'get_responses'):\n for res in obj.get_responses().values():\n res.activate(obj)\n\n for comp in self.get_comps():\n if has_interface(comp, IDriver) or has_interface(comp, IAssembly):\n comp.setup_depgraph(self._depgraph)", "metadata": "root.Assembly.setup_depgraph", "header": "['class', 'Assembly', '(', 'Component', ')', ':', '___EOS___']", "index": 1203 }, { "content": " def get_all_local_vars(self):\n \"\"\"Return the set of all variables in this Assembly and any\n of its children that are local to the current MPI process.\n \"\"\"\n all_locs = set()\n all_locs.update(self.list_inputs())\n all_locs.update(self.list_outputs())\n\n for s in [self._system] + list(self._system.local_subsystems(recurse=True)):\n if isinstance(s, SimpleSystem):\n try:\n obj = self.get(s.name)\n except:\n continue\n if has_interface(obj, IAssembly):\n all_locs.update(['.'.join([obj.name, n])\n for n in obj.get_all_local_vars()])\n elif has_interface(obj, IComponent):\n lvars = ['.'.join([obj.name, n])\n for n in obj.list_inputs() +\n obj.list_outputs()]\n for i, v in enumerate(lvars):\n if v in s.distrib_idxs:\n lvars[i] = (v,) # wrap in tuple to indicate its a distrib var\n all_locs.update(lvars)\n\n elif isinstance(s, ParamSystem):\n all_locs.add(s.name)\n\n return all_locs", "metadata": "root.Assembly.get_all_local_vars", "header": "['class', 'Assembly', '(', 'Component', ')', ':', '___EOS___']", "index": 1589 } ]

[ { "span": "except:", "start_line": 628, "start_column": 8, "end_line": 628, "end_column": 15 }, { "span": "except:", "start_line": 1258, "start_column": 12, "end_line": 1258, "end_column": 19 }, { "span": "except:", "start_line": 1601, "start_column": 16, "end_line": 1601, "end_column": 23 } ]

[]

1

true

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"\\u\\u\\uINDENT\\u\\u\\u ", " ", " _", "if_", "v_", "in_", "s_", "._", "distri", "b", "\\u", "idxs_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", " _", "lv", "ars_", "[_", "i_", "]_", "=_", "(_", "v_", ",_", ")_", "#", " ", "wrap", " ", "in", " ", "tuple", " ", "to", " ", "indicat", "e", " ", "its", " ", "a", " ", "distri", "b", " ", "var_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "all", "\\u", "locs_", "._", "update_", "(_", "lv", "ars_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "elif_", "isinstance_", "(_", "s_", ",_", "Param", "System_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " ", "_", "all", "\\u", "locs_", "._", "add_", "(_", "s_", "._", "name_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "return_", "all", "\\u", "locs_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Imprecise assert

python-beaver/python-beaver/beaver/tests/test_glob_sections.py

[ { "content": " def test_globs(self):\n files = [os.path.realpath(x) for x in glob.glob('tests/logs/0x[0-9]*.log')]\n for file in self.beaver_config.getfilepaths():\n self.assertTrue(file in files)", "metadata": "root.ConfigTests.test_globs", "header": "['class', 'ConfigTests', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 19 } ]

[ { "span": "self.assertTrue(file in files)", "start_line": 22, "start_column": 12, "end_line": 22, "end_column": 42 } ]

[]

1

true

[ "[CLS]_", "Imp", "reci", "se_", "assert_", "[SEP]_", "class_", "Config", "Tests_", "(_", "unittest_", "._", "Test", "Case_", ")_", ":_", "\\u\\u\\uEOS\\u\\u\\u_", "\\u\\u\\uNL\\u\\u\\u_", "\\u\\u\\uDEDENT\\u\\u\\u_", "def_", "test\\u", "globs_", "(_", "self_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "files_", "=_", "[_", "os_", "._", "path_", "._", "realpath_", "(_", "x_", ")_", "for_", "x_", "in_", "glob_", "._", "glob_", "(_", "'", "tests", "/", "logs", "/", "0", "x", "[", "0", "-", "9", "]*", ".", "log", "'_", ")_", "]_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "for_", "file_", "in_", "self_", "._", "bea", "ver", "\\u", "config_", "._", "getfile", "paths_", "(_", ")_", ":_", "\\u\\u\\uNEWLINE\\u\\u\\u_", "\\u\\u\\uINDENT\\u\\u\\u ", " _", "self_", "._", "assert", "True_", "(_", "file_", "in_", "files_", ")_", "\\u\\u\\uNEWLINE\\u\\u\\u_" ]

[ 4, 4, 4, 4, 4, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 0, 1, 1, 1, 1, 1, 1, 1, 1, 2 ]

Imprecise assert

ffunenga/pipgh/tests/cli/test_main.py

[ { "content": " def test_init_doc(self):\n doc = pipgh.__doc__\n self.assertTrue(doc != None)\n self.assertTrue('Usage:' in doc)\n self.assertTrue('Commands:' in doc)\n self.assertTrue('Options:' in doc)\n self.assertTrue('Examples:' in doc)", "metadata": "root.TestMain.test_init_doc", "header": "['class', 'TestMain', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 9 }, { "content": " def test_cli_fails_output(self):\n # pipgh [--auth] search (...)\n # pipgh [--auth] show (...)\n # pipgh install (...)\n # pipgh [-h | --help | --version]\n argvs = [\n ([], pipgh.pipgh.USAGE_MESSAGE),\n ([], pipgh.__version__),\n (['-h'], pipgh.pipgh.USAGE_MESSAGE),\n (['--help'], pipgh.pipgh.USAGE_MESSAGE),\n (['-h'], pipgh.pipgh.HELP_MESSAGE.strip()),\n (['--help'], pipgh.pipgh.HELP_MESSAGE.strip()),\n (['--version'], pipgh.__version__),\n ]\n for idx, (argv, output) in enumerate(argvs):\n try:\n pipgh.main(argv, dry_run=True)\n except SystemExit as e:\n args = e.args\n else:\n _err = 'ArgvCase#%d %s failed to SystemExit' % (idx, str(argv))\n raise AssertionError(_err)\n try:\n self.assertTrue(output in args[0])\n except AssertionError as e:\n _err = 'ArgvCase#%d %s failed SystemExit\\'s output'\n e.args = (_err % (idx, str(argv)),)\n raise", "metadata": "root.TestMain.test_cli_fails_output", "header": "['class', 'TestMain', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 47 } ]

[ { "span": "self.assertTrue(doc != None)", "start_line": 11, "start_column": 8, "end_line": 11, "end_column": 36 }, { "span": "self.assertTrue('Usage:' in doc)", "start_line": 12, "start_column": 8, "end_line": 12, "end_column": 40 }, { "span": "self.assertTrue('Commands:' in doc)", "start_line": 13, "start_column": 8, "end_line": 13, "end_column": 43 }, { "span": "self.assertTrue('Options:' in doc)", "start_line": 14, "start_column": 8, "end_line": 14, "end_column": 42 }, { "span": "self.assertTrue('Examples:' in doc)", "start_line": 15, "start_column": 8, "end_line": 15, "end_column": 43 }, { "span": "self.assertTrue(output in args[0])", "start_line": 70, "start_column": 16, "end_line": 70, "end_column": 50 } ]

[]

1

true

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Unreachable code

snare/voltron/voltron/plugins/debugger/dbg_vdb.py

[ { "content": " @lock_host\n def command(self, command=None):\n \"\"\"\n Execute a command in the debugger.\n\n `command` is the command string to execute.\n \"\"\"\n if command:\n # well, this is hacky...\n # hook the canvas to capture a command's output\n oldcan = self._vdb.canvas\n newcan = envi.memcanvas.StringMemoryCanvas(self._vdb.memobj, self._vdb.symobj)\n try:\n self._vdb.canvas = newcan\n self._vdb.onecmd(command)\n finally:\n self._vdb.canvas = oldcan\n return str(newcan).rstrip(\"\\n\")\n else:\n raise Exception(\"No command specified\")\n\n return res", "metadata": "root.VDBAdaptor.command", "header": "['class', 'VDBAdaptor', '(', 'DebuggerAdaptor', ')', ':', '___EOS___']", "index": 376 } ]

[ { "span": "return res", "start_line": 397, "start_column": 12, "end_line": 397, "end_column": 22 } ]

[]

1

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Unused import

ithinksw/philo/philo/contrib/julian/migrations/0001_initial.py

[ { "content": "# encoding: utf-8\nimport datetime\nfrom south.db import db\nfrom south.v2 import SchemaMigration\nfrom django.db import models\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Migration(SchemaMigration):\n\n\n\n\n\n models = {\n 'auth.group': {\n 'Meta': {'object_name': 'Group'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'unique': 'True', 'max_length': '80'}),\n 'permissions': ('django.db.models.fields.related.ManyToManyField', [], {'to': \"orm['auth.Permission']\", 'symmetrical': 'False', 'blank': 'True'})\n },\n 'auth.permission': {\n 'Meta': {'ordering': \"('content_type__app_label', 'content_type__model', 'codename')\", 'unique_together': \"(('content_type', 'codename'),)\", 'object_name': 'Permission'},\n 'codename': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'content_type': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['contenttypes.ContentType']\"}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '50'})\n },\n 'auth.user': {\n 'Meta': {'object_name': 'User'},\n 'date_joined': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now'}),\n 'email': ('django.db.models.fields.EmailField', [], {'max_length': '75', 'blank': 'True'}),\n 'first_name': ('django.db.models.fields.CharField', [], {'max_length': '30', 'blank': 'True'}),\n 'groups': ('django.db.models.fields.related.ManyToManyField', [], {'to': \"orm['auth.Group']\", 'symmetrical': 'False', 'blank': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'is_active': ('django.db.models.fields.BooleanField', [], {'default': 'True'}),\n 'is_staff': ('django.db.models.fields.BooleanField', [], {'default': 'False'}),\n 'is_superuser': ('django.db.models.fields.BooleanField', [], {'default': 'False'}),\n 'last_login': ('django.db.models.fields.DateTimeField', [], {'default': 'datetime.datetime.now'}),\n 'last_name': ('django.db.models.fields.CharField', [], {'max_length': '30', 'blank': 'True'}),\n 'password': ('django.db.models.fields.CharField', [], {'max_length': '128'}),\n 'user_permissions': ('django.db.models.fields.related.ManyToManyField', [], {'to': \"orm['auth.Permission']\", 'symmetrical': 'False', 'blank': 'True'}),\n 'username': ('django.db.models.fields.CharField', [], {'unique': 'True', 'max_length': '30'})\n },\n 'contenttypes.contenttype': {\n 'Meta': {'ordering': \"('name',)\", 'unique_together': \"(('app_label', 'model'),)\", 'object_name': 'ContentType', 'db_table': \"'django_content_type'\"},\n 'app_label': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'model': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '100'})\n },\n 'julian.calendar': {\n 'Meta': {'unique_together': \"(('name', 'site', 'language'),)\", 'object_name': 'Calendar'},\n 'description': ('django.db.models.fields.TextField', [], {'blank': 'True'}),\n 'events': ('django.db.models.fields.related.ManyToManyField', [], {'symmetrical': 'False', 'related_name': \"'calendars'\", 'blank': 'True', 'to': \"orm['julian.Event']\"}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'language': ('django.db.models.fields.CharField', [], {'default': \"'en'\", 'max_length': '5'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'site': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['sites.Site']\"}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '100', 'db_index': 'True'})\n },\n 'julian.calendarview': {\n 'Meta': {'object_name': 'CalendarView'},\n 'calendar': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['julian.Calendar']\"}),\n 'event_detail_page': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'calendar_detail_related'\", 'to': \"orm['philo.Page']\"}),\n 'events_per_page': ('django.db.models.fields.PositiveIntegerField', [], {'null': 'True', 'blank': 'True'}),\n 'feed_length': ('django.db.models.fields.PositiveIntegerField', [], {'default': '15', 'null': 'True', 'blank': 'True'}),\n 'feed_suffix': ('django.db.models.fields.CharField', [], {'default': \"'feed'\", 'max_length': '255'}),\n 'feed_type': ('django.db.models.fields.CharField', [], {'default': \"'text/calendar'\", 'max_length': '50'}),\n 'feeds_enabled': ('django.db.models.fields.BooleanField', [], {'default': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'index_page': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'calendar_index_related'\", 'to': \"orm['philo.Page']\"}),\n 'item_description_template': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'julian_calendarview_description_related'\", 'null': 'True', 'to': \"orm['philo.Template']\"}),\n 'item_title_template': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'julian_calendarview_title_related'\", 'null': 'True', 'to': \"orm['philo.Template']\"}),\n 'location_archive_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_location_archive_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'location_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_location_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'location_permalink_base': ('django.db.models.fields.CharField', [], {'default': \"'locations'\", 'max_length': '30'}),\n 'owner_archive_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_owner_archive_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'owner_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_owner_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'owner_permalink_base': ('django.db.models.fields.CharField', [], {'default': \"'owners'\", 'max_length': '30'}),\n 'tag_archive_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_tag_archive_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'tag_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_tag_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"}),\n 'tag_permalink_base': ('django.db.models.fields.CharField', [], {'default': \"'tags'\", 'max_length': '30'}),\n 'timespan_page': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'calendar_timespan_related'\", 'null': 'True', 'to': \"orm['philo.Page']\"})\n },\n 'julian.event': {\n 'Meta': {'unique_together': \"(('site', 'created'),)\", 'object_name': 'Event'},\n 'created': ('django.db.models.fields.DateTimeField', [], {'auto_now_add': 'True', 'blank': 'True'}),\n 'description': ('philo.models.fields.TemplateField', [], {}),\n 'end_date': ('django.db.models.fields.DateField', [], {}),\n 'end_time': ('django.db.models.fields.TimeField', [], {'null': 'True', 'blank': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'last_modified': ('django.db.models.fields.DateTimeField', [], {'auto_now': 'True', 'blank': 'True'}),\n 'location_content_type': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['contenttypes.ContentType']\", 'null': 'True', 'blank': 'True'}),\n 'location_pk': ('django.db.models.fields.TextField', [], {'blank': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'owner': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'owned_events'\", 'to': \"orm['auth.User']\"}),\n 'parent_event': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['julian.Event']\", 'null': 'True', 'blank': 'True'}),\n 'site': ('django.db.models.fields.related.ForeignKey', [], {'to': \"orm['sites.Site']\"}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '255', 'db_index': 'True'}),\n 'start_date': ('django.db.models.fields.DateField', [], {}),\n 'start_time': ('django.db.models.fields.TimeField', [], {'null': 'True', 'blank': 'True'}),\n 'tags': ('django.db.models.fields.related.ManyToManyField', [], {'blank': 'True', 'related_name': \"'events'\", 'null': 'True', 'symmetrical': 'False', 'to': \"orm['philo.Tag']\"})\n },\n 'julian.location': {\n 'Meta': {'object_name': 'Location'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'unique': 'True', 'max_length': '255', 'db_index': 'True'})\n },\n 'philo.attribute': {\n 'Meta': {'unique_together': \"(('key', 'entity_content_type', 'entity_object_id'), ('value_content_type', 'value_object_id'))\", 'object_name': 'Attribute'},\n 'entity_content_type': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'attribute_entity_set'\", 'to': \"orm['contenttypes.ContentType']\"}),\n 'entity_object_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'key': ('django.db.models.fields.CharField', [], {'max_length': '255', 'db_index': 'True'}),\n 'value_content_type': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'attribute_value_set'\", 'null': 'True', 'to': \"orm['contenttypes.ContentType']\"}),\n 'value_object_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True', 'null': 'True', 'blank': 'True'})\n },\n 'philo.node': {\n 'Meta': {'object_name': 'Node'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'level': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'lft': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'parent': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'children'\", 'null': 'True', 'to': \"orm['philo.Node']\"}),\n 'rght': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '255', 'db_index': 'True'}),\n 'tree_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'view_content_type': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'node_view_set'\", 'to': \"orm['contenttypes.ContentType']\"}),\n 'view_object_id': ('django.db.models.fields.PositiveIntegerField', [], {})\n },\n 'philo.page': {\n 'Meta': {'object_name': 'Page'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'template': ('django.db.models.fields.related.ForeignKey', [], {'related_name': \"'pages'\", 'to': \"orm['philo.Template']\"}),\n 'title': ('django.db.models.fields.CharField', [], {'max_length': '255'})\n },\n 'philo.tag': {\n 'Meta': {'ordering': \"('name',)\", 'object_name': 'Tag'},\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'unique': 'True', 'max_length': '255', 'db_index': 'True'})\n },\n 'philo.template': {\n 'Meta': {'object_name': 'Template'},\n 'code': ('philo.models.fields.TemplateField', [], {}),\n 'documentation': ('django.db.models.fields.TextField', [], {'null': 'True', 'blank': 'True'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'level': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'lft': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'mimetype': ('django.db.models.fields.CharField', [], {'default': \"'text/html'\", 'max_length': '255'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '255'}),\n 'parent': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'children'\", 'null': 'True', 'to': \"orm['philo.Template']\"}),\n 'rght': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'}),\n 'slug': ('django.db.models.fields.SlugField', [], {'max_length': '255', 'db_index': 'True'}),\n 'tree_id': ('django.db.models.fields.PositiveIntegerField', [], {'db_index': 'True'})\n },\n 'sites.site': {\n 'Meta': {'ordering': \"('domain',)\", 'object_name': 'Site', 'db_table': \"'django_site'\"},\n 'domain': ('django.db.models.fields.CharField', [], {'max_length': '100'}),\n 'id': ('django.db.models.fields.AutoField', [], {'primary_key': 'True'}),\n 'name': ('django.db.models.fields.CharField', [], {'max_length': '50'}),\n 'root_node': ('django.db.models.fields.related.ForeignKey', [], {'blank': 'True', 'related_name': \"'sites'\", 'null': 'True', 'to': \"orm['philo.Node']\"})\n }\n }\n\n complete_apps = ['julian']", "metadata": "root.Migration", "header": "['module', '___EOS___']", "index": 6 }, { "content": " def forwards(self, orm):\n \n # Adding model 'Location'\n db.create_table('julian_location', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('name', self.gf('django.db.models.fields.CharField')(max_length=255)),\n ('slug', self.gf('django.db.models.fields.SlugField')(unique=True, max_length=255, db_index=True)),\n ))\n db.send_create_signal('julian', ['Location'])\n\n # Adding model 'Event'\n db.create_table('julian_event', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('start_date', self.gf('django.db.models.fields.DateField')()),\n ('start_time', self.gf('django.db.models.fields.TimeField')(null=True, blank=True)),\n ('end_date', self.gf('django.db.models.fields.DateField')()),\n ('end_time', self.gf('django.db.models.fields.TimeField')(null=True, blank=True)),\n ('name', self.gf('django.db.models.fields.CharField')(max_length=255)),\n ('slug', self.gf('django.db.models.fields.SlugField')(max_length=255, db_index=True)),\n ('location_content_type', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['contenttypes.ContentType'], null=True, blank=True)),\n ('location_pk', self.gf('django.db.models.fields.TextField')(blank=True)),\n ('description', self.gf('philo.models.fields.TemplateField')()),\n ('parent_event', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['julian.Event'], null=True, blank=True)),\n ('owner', self.gf('django.db.models.fields.related.ForeignKey')(related_name='owned_events', to=orm['auth.User'])),\n ('created', self.gf('django.db.models.fields.DateTimeField')(auto_now_add=True, blank=True)),\n ('last_modified', self.gf('django.db.models.fields.DateTimeField')(auto_now=True, blank=True)),\n ('site', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['sites.Site'])),\n ))\n db.send_create_signal('julian', ['Event'])\n\n # Adding unique constraint on 'Event', fields ['site', 'created']\n db.create_unique('julian_event', ['site_id', 'created'])\n\n # Adding M2M table for field tags on 'Event'\n db.create_table('julian_event_tags', (\n ('id', models.AutoField(verbose_name='ID', primary_key=True, auto_created=True)),\n ('event', models.ForeignKey(orm['julian.event'], null=False)),\n ('tag', models.ForeignKey(orm['philo.tag'], null=False))\n ))\n db.create_unique('julian_event_tags', ['event_id', 'tag_id'])\n\n # Adding model 'Calendar'\n db.create_table('julian_calendar', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('name', self.gf('django.db.models.fields.CharField')(max_length=100)),\n ('slug', self.gf('django.db.models.fields.SlugField')(max_length=100, db_index=True)),\n ('description', self.gf('django.db.models.fields.TextField')(blank=True)),\n ('site', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['sites.Site'])),\n ('language', self.gf('django.db.models.fields.CharField')(default='en', max_length=5)),\n ))\n db.send_create_signal('julian', ['Calendar'])\n\n # Adding unique constraint on 'Calendar', fields ['name', 'site', 'language']\n db.create_unique('julian_calendar', ['name', 'site_id', 'language'])\n\n # Adding M2M table for field events on 'Calendar'\n db.create_table('julian_calendar_events', (\n ('id', models.AutoField(verbose_name='ID', primary_key=True, auto_created=True)),\n ('calendar', models.ForeignKey(orm['julian.calendar'], null=False)),\n ('event', models.ForeignKey(orm['julian.event'], null=False))\n ))\n db.create_unique('julian_calendar_events', ['calendar_id', 'event_id'])\n\n # Adding model 'CalendarView'\n db.create_table('julian_calendarview', (\n ('id', self.gf('django.db.models.fields.AutoField')(primary_key=True)),\n ('feed_type', self.gf('django.db.models.fields.CharField')(default='text/calendar', max_length=50)),\n ('feed_suffix', self.gf('django.db.models.fields.CharField')(default='feed', max_length=255)),\n ('feeds_enabled', self.gf('django.db.models.fields.BooleanField')(default=True)),\n ('feed_length', self.gf('django.db.models.fields.PositiveIntegerField')(default=15, null=True, blank=True)),\n ('item_title_template', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='julian_calendarview_title_related', null=True, to=orm['philo.Template'])),\n ('item_description_template', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='julian_calendarview_description_related', null=True, to=orm['philo.Template'])),\n ('calendar', self.gf('django.db.models.fields.related.ForeignKey')(to=orm['julian.Calendar'])),\n ('index_page', self.gf('django.db.models.fields.related.ForeignKey')(related_name='calendar_index_related', to=orm['philo.Page'])),\n ('event_detail_page', self.gf('django.db.models.fields.related.ForeignKey')(related_name='calendar_detail_related', to=orm['philo.Page'])),\n ('timespan_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_timespan_related', null=True, to=orm['philo.Page'])),\n ('tag_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_tag_related', null=True, to=orm['philo.Page'])),\n ('location_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_location_related', null=True, to=orm['philo.Page'])),\n ('owner_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_owner_related', null=True, to=orm['philo.Page'])),\n ('tag_archive_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_tag_archive_related', null=True, to=orm['philo.Page'])),\n ('location_archive_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_location_archive_related', null=True, to=orm['philo.Page'])),\n ('owner_archive_page', self.gf('django.db.models.fields.related.ForeignKey')(blank=True, related_name='calendar_owner_archive_related', null=True, to=orm['philo.Page'])),\n ('tag_permalink_base', self.gf('django.db.models.fields.CharField')(default='tags', max_length=30)),\n ('owner_permalink_base', self.gf('django.db.models.fields.CharField')(default='owners', max_length=30)),\n ('location_permalink_base', self.gf('django.db.models.fields.CharField')(default='locations', max_length=30)),\n ('events_per_page', self.gf('django.db.models.fields.PositiveIntegerField')(null=True, blank=True)),\n ))\n db.send_create_signal('julian', ['CalendarView'])", "metadata": "root.Migration.forwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 8 }, { "content": " def backwards(self, orm):\n \n # Removing unique constraint on 'Calendar', fields ['name', 'site', 'language']\n db.delete_unique('julian_calendar', ['name', 'site_id', 'language'])\n\n # Removing unique constraint on 'Event', fields ['site', 'created']\n db.delete_unique('julian_event', ['site_id', 'created'])\n\n # Deleting model 'Location'\n db.delete_table('julian_location')\n\n # Deleting model 'Event'\n db.delete_table('julian_event')\n\n # Removing M2M table for field tags on 'Event'\n db.delete_table('julian_event_tags')\n\n # Deleting model 'Calendar'\n db.delete_table('julian_calendar')\n\n # Removing M2M table for field events on 'Calendar'\n db.delete_table('julian_calendar_events')\n\n # Deleting model 'CalendarView'\n db.delete_table('julian_calendarview')", "metadata": "root.Migration.backwards", "header": "['class', 'Migration', '(', 'SchemaMigration', ')', ':', '___EOS___']", "index": 98 } ]

[ { "span": "import datetime", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 15 } ]

[]

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Unused import

pingali/dgit/dgitcore/datasets/common.py

[ { "content": "#!/usr/bin/env python\n\"\"\"\nThis is the core module for manipulating the dataset metadata\n\"\"\"\nimport os, sys, copy, fnmatch, re, shutil\nimport yaml, json, tempfile, mimetypes\nimport webbrowser, traceback, collections\nimport subprocess, string, random, pipes\nfrom collections import OrderedDict\nimport shelve, getpass\nfrom datetime import datetime\nfrom hashlib import sha256\nimport mimetypes\nimport platform\nimport uuid, shutil\nimport boto3, glob2\nimport subprocess\nfrom dateutil import parser\ntry:\n from urllib.parse import urlparse\nexcept:\n from urlparse import urlparse\nfrom ..config import get_config\nfrom ..plugins.common import plugins_get_mgr\nfrom ..helper import bcolors, clean_str, cd, compute_sha256, run, clean_name, log_repo_action \nfrom ..exceptions import *\nfrom .history import get_history, get_diffs\nfrom .validation import validate\n\n#####################################################\n# Exports\n#####################################################\n\n__all__ = [\n 'lookup',\n 'list_repos',\n 'shellcmd',\n 'log', 'show', 'push', 'pull', 'commit',\n 'stash', 'drop', 'status', 'post',\n 'clone', 'init', 'diff',\n 'remote', 'delete'\n]\n\n#####################################################\n# Repo independent commands...\n#####################################################\n\n\n\n#####################################################\n# Repo specific generic commands\n#####################################################\n\n\n\n#####################################################\n# Repo specific simple commands\n#####################################################\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n#####################################################\n# Initialize a repo\n#####################################################\n\n\n\n\n\n###########################################################\n# Post metadata to a server\n###########################################################\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def lookup(username, reponame):\n \"\"\"\n Lookup a repo based on username reponame\n \"\"\"\n\n mgr = plugins_get_mgr()\n\n # XXX This should be generalized to all repo managers.\n repomgr = mgr.get(what='repomanager', name='git')\n repo = repomgr.lookup(username=username,\n reponame=reponame)\n return repo", "metadata": "root.lookup", "header": "['module', '___EOS___']", "index": 46 }, { "content": "def list_repos(remote=False):\n \"\"\"\n List repos\n\n Parameters\n ----------\n\n remote: Flag\n \"\"\"\n mgr = plugins_get_mgr()\n\n if not remote:\n repomgr = mgr.get(what='repomanager', name='git')\n repos = repomgr.get_repo_list()\n repos.sort()\n return repos\n else:\n raise Exception(\"Not supported yet\")", "metadata": "root.list_repos", "header": "['module', '___EOS___']", "index": 59 }, { "content": "@log_repo_action \ndef shellcmd(repo, args):\n \"\"\"\n Run a shell command within the repo's context\n\n Parameters\n ----------\n\n repo: Repository object\n args: Shell command\n \"\"\"\n with cd(repo.rootdir):\n result = run(args)\n return result", "metadata": "root.shellcmd", "header": "['module', '___EOS___']", "index": 82 }, { "content": "def datapackage_exists(repo):\n \"\"\"\n Check if the datapackage exists...\n \"\"\"\n datapath = os.path.join(repo.rootdir, \"datapackage.json\")\n return os.path.exists(datapath)", "metadata": "root.datapackage_exists", "header": "['module', '___EOS___']", "index": 98 }, { "content": "def generic_repo_cmd(repo, cmd, *args):\n # print(\"Running generic command\", cmd, args)\n return repo.run(cmd, *args)", "metadata": "root.generic_repo_cmd", "header": "['module', '___EOS___']", "index": 108 }, { "content": "@log_repo_action \ndef log(repo, args=[]):\n \"\"\"\n Log of the changes executed until now\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'log', args)", "metadata": "root.log", "header": "['module', '___EOS___']", "index": 113 }, { "content": "@log_repo_action \ndef show(repo, args=[]):\n \"\"\"\n Show commit details\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'show', args)", "metadata": "root.show", "header": "['module', '___EOS___']", "index": 126 }, { "content": "@log_repo_action \ndef remote(repo, args=[]):\n \"\"\"\n Show remote\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'remote', args)", "metadata": "root.remote", "header": "['module', '___EOS___']", "index": 139 }, { "content": "@log_repo_action \ndef push(repo, args=[]):\n \"\"\"\n Push changes to the backend\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'push', args)", "metadata": "root.push", "header": "['module', '___EOS___']", "index": 152 }, { "content": "@log_repo_action \ndef pull(repo, args=[]):\n \"\"\"\n Pull changes from the backend\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'pull', args)", "metadata": "root.pull", "header": "['module', '___EOS___']", "index": 165 }, { "content": "@log_repo_action \ndef commit(repo, args=[]):\n \"\"\"\n Commit changes to the data repository\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'commit', args)", "metadata": "root.commit", "header": "['module', '___EOS___']", "index": 178 }, { "content": "def drop(repo, args=[]):\n \"\"\"\n Drop the repository (new to dgit)\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'drop', args)", "metadata": "root.drop", "header": "['module', '___EOS___']", "index": 191 }, { "content": "@log_repo_action \ndef stash(repo, args=[]):\n \"\"\"\n Stash the changes\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'stash', args)", "metadata": "root.stash", "header": "['module', '___EOS___']", "index": 203 }, { "content": "@log_repo_action \ndef diff(repo, args=[]):\n \"\"\"\n Diff between versions\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n return generic_repo_cmd(repo, 'diff', args)", "metadata": "root.diff", "header": "['module', '___EOS___']", "index": 216 }, { "content": "@log_repo_action \ndef status(repo, args=[]):\n \"\"\"\n Show status of the repo\n\n Parameters\n ----------\n\n repo: Repository object (result of lookup)\n details: Show internal details of the repo\n args: Parameters to be passed to git status command\n\n \"\"\"\n\n result = generic_repo_cmd(repo, 'status', args)\n return result", "metadata": "root.status", "header": "['module', '___EOS___']", "index": 229 }, { "content": "@log_repo_action \ndef delete(repo, args=[]):\n \"\"\"\n Delete files\n\n Parameters\n ----------\n\n repo: Repository object\n args: Arguments to git command\n \"\"\"\n\n # Remove the files \n result = generic_repo_cmd(repo, 'delete', args)\n if result['status'] != 'success': \n return status \n\n with cd(repo.rootdir): \n \n package = repo.package \n resources = package['resources'] \n\n cleaned_resources = []\n for r in resources: \n relativepath = r['relativepath'] \n sha256 = r['sha256'] \n if relativepath not in ['', None]: \n if not os.path.exists(relativepath): \n # This file does not exist on disk. \n print(\"Skipping\", relativepath) \n continue \n cleaned_resources.append(r) \n \n package['resources'] = cleaned_resources \n repo.package = package \n \n with open('datapackage.json', 'w') as fd: \n fd.write(json.dumps(repo.package, indent=4))\n\n return {\n 'status': 'success',\n 'message': ''\n }", "metadata": "root.delete", "header": "['module', '___EOS___']", "index": 246 }, { "content": "def bootstrap_datapackage(repo, force=False,\n options=None, noinput=False):\n \"\"\"\n Create the datapackage file..\n \"\"\"\n\n print(\"Bootstrapping datapackage\")\n\n # get the directory\n tsprefix = datetime.now().date().isoformat()\n\n # Initial data package json\n package = OrderedDict([\n ('title', ''),\n ('description', ''),\n ('username', repo.username),\n ('reponame', repo.reponame),\n ('name', str(repo)),\n ('title', \"\"),\n ('description', \"\"),\n ('keywords', []),\n ('resources', []),\n ('creator', getpass.getuser()),\n ('createdat', datetime.now().isoformat()),\n ('remote-url', repo.remoteurl)\n ])\n\n if options is not None:\n package['title'] = options['title']\n package['description'] = options['description']\n else:\n if noinput:\n raise IncompleteParameters(\"Option field with title and description\")\n\n for var in ['title', 'description']:\n value = ''\n while value in ['',None]:\n value = input('Your Repo ' + var.title() + \": \")\n if len(value) == 0:\n print(\"{} cannot be empty. Please re-enter.\".format(var.title()))\n\n package[var] = value\n\n\n # Now store the package...\n (handle, filename) = tempfile.mkstemp()\n with open(filename, 'w') as fd:\n fd.write(json.dumps(package, indent=4))\n\n repo.package = package\n\n return filename", "metadata": "root.bootstrap_datapackage", "header": "['module', '___EOS___']", "index": 296 }, { "content": "def init(username, reponame, setup,\n force=False, options=None,\n noinput=False):\n \"\"\"\n Initialize an empty repository with datapackage.json\n\n Parameters\n ----------\n\n username: Name of the user\n reponame: Name of the repo\n setup: Specify the 'configuration' (git only, git+s3 backend etc)\n force: Force creation of the files\n options: Dictionary with content of dgit.json, if available.\n noinput: Automatic operation with no human interaction\n \"\"\"\n\n mgr = plugins_get_mgr()\n repomgr = mgr.get(what='repomanager', name='git')\n\n backendmgr = None\n if setup == 'git+s3':\n backendmgr = mgr.get(what='backend', name='s3')\n\n repo = repomgr.init(username, reponame, force, backendmgr)\n\n # Now bootstrap the datapackage.json metadata file and copy it in...\n\n # Insert a gitignore with .dgit directory in the repo. This\n # directory will be used to store partial results\n (handle, gitignore) = tempfile.mkstemp()\n with open(gitignore, 'w') as fd:\n fd.write(\".dgit\")\n\n # Try to bootstrap. If you cant, cleanup and return\n try:\n filename = bootstrap_datapackage(repo, force, options, noinput)\n except Exception as e:\n repomgr.drop(repo,[])\n os.unlink(gitignore)\n raise e\n\n repo.run('add_files',\n [\n {\n 'relativepath': 'datapackage.json',\n 'localfullpath': filename,\n },\n {\n 'relativepath': '.gitignore',\n 'localfullpath': gitignore,\n },\n ])\n\n\n # Cleanup temp files\n os.unlink(filename)\n os.unlink(gitignore)\n\n args = ['-a', '-m', 'Bootstrapped the repo']\n repo.run('commit', args)\n \n return repo", "metadata": "root.init", "header": "['module', '___EOS___']", "index": 349 }, { "content": "def clone(url):\n \"\"\"\n Clone a URL. Examples include:\n\n - [email protected]:pingali/dgit.git\n - https://github.com:pingali/dgit.git\n - s3://mybucket/git/pingali/dgit.git\n\n Parameters\n ----------\n\n url: URL of the repo\n\n \"\"\"\n backend = None\n backendmgr = None\n if url.startswith('s3'):\n backendtype = 's3'\n elif url.startswith(\"http\") or url.startswith(\"git\"):\n backendtype = 'git'\n else:\n backendtype = None\n\n mgr = plugins_get_mgr()\n repomgr = mgr.get(what='repomanager', name='git')\n backendmgr = mgr.get(what='backend', name=backendtype)\n\n # print(\"Testing {} with backend {}\".format(url, backendmgr))\n if backendmgr is not None and not backendmgr.url_is_valid(url):\n raise InvalidParameters(\"Invalid URL\")\n\n key = repomgr.clone(url, backendmgr)\n\n # Insert a datapackage if it doesnt already exist...\n repo = repomgr.lookup(key=key)\n if not datapackage_exists(repo):\n filename = bootstrap_datapackage(repo)\n repo.run('add_files',\n [\n {\n 'relativepath': 'datapackage.json',\n 'localfullpath': filename,\n },\n ])\n os.unlink(filename)\n args = ['-a', '-m', 'Bootstrapped the repo']\n repo.run('commit', args)\n\n return repo", "metadata": "root.clone", "header": "['module', '___EOS___']", "index": 413 }, { "content": "def annotate_metadata_data(repo, task, patterns=[\"*\"], size=0):\n \"\"\"\n Update metadata with the content of the files\n \"\"\"\n\n mgr = plugins_get_mgr() \n keys = mgr.search('representation')['representation']\n representations = [mgr.get_by_key('representation', k) for k in keys]\n\n matching_files = repo.find_matching_files(patterns)\n package = repo.package\n rootdir = repo.rootdir\n files = package['resources']\n for f in files:\n relativepath = f['relativepath']\n if relativepath in matching_files:\n path = os.path.join(rootdir, relativepath)\n if task == 'preview':\n print(\"Adding preview for \", relativepath)\n f['content'] = open(path).read()[:size]\n elif task == 'schema':\n for r in representations: \n if r.can_process(path): \n print(\"Adding schema for \", path)\n f['schema'] = r.get_schema(path)\n break ", "metadata": "root.annotate_metadata_data", "header": "['module', '___EOS___']", "index": 469 }, { "content": "def annotate_metadata_code(repo, files):\n \"\"\"\n Update metadata with the commit information\n \"\"\"\n\n package = repo.package\n package['code'] = []\n for p in files:\n matching_files = glob2.glob(\"**/{}\".format(p))\n for f in matching_files:\n absf = os.path.abspath(f)\n print(\"Add commit data for {}\".format(f))\n package['code'].append(OrderedDict([\n ('script', f),\n ('permalink', repo.manager.permalink(repo, absf)),\n ('mimetypes', mimetypes.guess_type(absf)[0]),\n ('sha256', compute_sha256(absf))\n ]))", "metadata": "root.annotate_metadata_code", "header": "['module', '___EOS___']", "index": 496 }, { "content": "def annotate_metadata_action(repo):\n \"\"\"\n Update metadata with the action history \n \"\"\"\n package = repo.package \n\n print(\"Including history of actions\")\n with cd(repo.rootdir): \n filename = \".dgit/log.json\" \n if os.path.exists(filename): \n history = open(filename).readlines() \n actions = []\n for a in history: \n try: \n a = json.loads(a)\n for x in ['code']: \n if x not in a or a[x] == None: \n a[x] = \"...\"\n actions.append(a)\n except:\n pass \n package['actions'] = actions", "metadata": "root.annotate_metadata_action", "header": "['module', '___EOS___']", "index": 516 }, { "content": "def annotate_metadata_platform(repo):\n \"\"\"\n Update metadata host information\n \"\"\"\n\n print(\"Added platform information\")\n package = repo.package\n mgr = plugins_get_mgr()\n repomgr = mgr.get(what='instrumentation', name='platform')\n package['platform'] = repomgr.get_metadata()", "metadata": "root.annotate_metadata_platform", "header": "['module', '___EOS___']", "index": 539 }, { "content": "def annotate_metadata_diffs(repo):\n\n print(\"Computing schema changes\")\n with cd(repo.rootdir):\n get_diffs(repo.package['history'])", "metadata": "root.annotate_metadata_diffs", "header": "['module', '___EOS___']", "index": 550 }, { "content": "def annotate_metadata_validation(repo):\n\n print(\"Adding validation information\")\n # Collect the validation results by relativepath\n results = validate(repo)\n fileresults = {}\n for r in results:\n filename = r['target']\n if filename not in fileresults:\n fileresults[filename] = []\n fileresults[filename].append(r)\n\n for r in repo.package['resources']:\n path = r['relativepath']\n if path in fileresults:\n r['validation'] = fileresults[path]", "metadata": "root.annotate_metadata_validation", "header": "['module', '___EOS___']", "index": 556 }, { "content": "def annotate_metadata_dependencies(repo):\n \"\"\"\n Collect information from the dependent repo's\n \"\"\"\n\n options = repo.options\n\n if 'dependencies' not in options:\n print(\"No dependencies\")\n return []\n\n repos = []\n dependent_repos = options['dependencies']\n for d in dependent_repos:\n if \"/\" not in d:\n print(\"Invalid dependency specification\")\n (username, reponame) = d.split(\"/\")\n try:\n repos.append(repo.manager.lookup(username, reponame))\n except:\n print(\"Repository does not exist. Please create one\", d)\n\n package = repo.package\n package['dependencies'] = []\n for r in repos:\n package['dependencies'].append({\n 'username': r.username,\n 'reponame': r.reponame,\n })", "metadata": "root.annotate_metadata_dependencies", "header": "['module', '___EOS___']", "index": 573 }, { "content": "def post(repo, args=[]):\n \"\"\"\n Post to metadata server\n\n Parameters\n ----------\n\n repo: Repository object (result of lookup)\n \"\"\"\n\n mgr = plugins_get_mgr()\n keys = mgr.search(what='metadata')\n keys = keys['metadata']\n\n if len(keys) == 0:\n return\n\n # Incorporate pipeline information...\n if 'pipeline' in repo.options:\n for name, details in repo.options['pipeline'].items():\n patterns = details['files']\n matching_files = repo.find_matching_files(patterns)\n matching_files.sort()\n details['files'] = matching_files\n for i, f in enumerate(matching_files):\n r = repo.get_resource(f)\n if 'pipeline' not in r:\n r['pipeline'] = []\n r['pipeline'].append(name + \" [Step {}]\".format(i))\n\n if 'metadata-management' in repo.options:\n\n print(\"Collecting all the required metadata to post\")\n metadata = repo.options['metadata-management']\n\n # Add data repo history\n if 'include-data-history' in metadata and metadata['include-data-history']:\n repo.package['history'] = get_history(repo.rootdir)\n\n # Add action history \n if 'include-action-history' in metadata and metadata['include-action-history']:\n annotate_metadata_action(repo) \n\n # Add data repo history\n if 'include-preview' in metadata:\n annotate_metadata_data(repo,\n task='preview',\n patterns=metadata['include-preview']['files'],\n size=metadata['include-preview']['length'])\n\n if (('include-schema' in metadata) and metadata['include-schema']):\n annotate_metadata_data(repo, task='schema')\n\n if 'include-code-history' in metadata:\n annotate_metadata_code(repo, files=metadata['include-code-history'])\n\n if 'include-platform' in metadata:\n annotate_metadata_platform(repo)\n\n if 'include-validation' in metadata:\n annotate_metadata_validation(repo)\n\n if 'include-dependencies' in metadata:\n annotate_metadata_dependencies(repo)\n\n history = repo.package.get('history',None)\n if (('include-tab-diffs' in metadata) and\n metadata['include-tab-diffs'] and\n history is not None):\n annotate_metadata_diffs(repo)\n\n # Insert options as well\n repo.package['config'] = repo.options\n\n try:\n for k in keys:\n # print(\"Key\", k)\n metadatamgr = mgr.get_by_key('metadata', k)\n url = metadatamgr.url\n o = urlparse(url)\n print(\"Posting to \", o.netloc)\n response = metadatamgr.post(repo)\n if isinstance(response, str):\n print(\"Error while posting:\", response)\n elif response.status_code in [400]:\n content = response.json()\n print(\"Error while posting:\")\n for k in content:\n print(\" \", k,\"- \", \",\".join(content[k]))\n except NetworkError as e:\n print(\"Unable to reach metadata server!\")\n except NetworkInvalidConfiguration as e:\n print(\"Invalid network configuration in the INI file\")\n print(e.message)\n except Exception as e:\n print(\"Could not post. Unknown error\")\n print(e)", "metadata": "root.post", "header": "['module', '___EOS___']", "index": 603 } ]

[ { "span": "import os, sys, copy, fnmatch, re, shutil", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 41 }, { "span": "import yaml, json, tempfile, mimetypes", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 38 }, { "span": "import webbrowser, traceback, collections", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 41 }, { "span": "import subprocess, string, random, pipes", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 40 }, { "span": "import shelve, getpass", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 22 }, { "span": "import platform", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 15 }, { "span": "import uuid, shutil", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 19 }, { "span": "import boto3, glob2", "start_line": 15, "start_column": 0, "end_line": 15, "end_column": 19 }, { "span": "import subprocess", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 17 }, { "span": "from dateutil import parser", "start_line": 17, "start_column": 0, "end_line": 17, "end_column": 27 } ]

[]

1

false

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Unused import

chrisdev/wagtail-cookiecutter-foundation/{{cookiecutter.repo_name}}/products/models.py

[ { "content": "from django.db import models\nfrom django.core.paginator import Paginator, EmptyPage, PageNotAnInteger\n\nfrom wagtail.wagtailcore.models import Page, Orderable\nfrom wagtail.wagtailcore.fields import RichTextField\nfrom wagtail.wagtailimages.edit_handlers import ImageChooserPanel\nfrom wagtail.wagtailimages.models import Image\n\n\nfrom wagtail.wagtailadmin.edit_handlers import (\n FieldPanel, MultiFieldPanel, InlinePanel\n)\nfrom wagtail.wagtailsearch import index\nfrom wagtail.wagtailsnippets.models import register_snippet\nfrom wagtail.wagtailsnippets.edit_handlers import SnippetChooserPanel\n\nfrom modelcluster.fields import ParentalKey\nfrom modelcluster.tags import ClusterTaggableManager\nfrom taggit.models import Tag, TaggedItemBase\nfrom utils.models import LinkFields, RelatedLink, CarouselItem\n\n\n# Product page\n\n\n\nProductIndexPage.content_panels = [\n FieldPanel('title', classname=\"full title\"),\n FieldPanel('subtitle'),\n FieldPanel('intro', classname=\"full\"),\n InlinePanel('related_links', label=\"Related links\"),\n]\n\n\n\n\n\n\n\nProductPage.content_panels = [\n FieldPanel('title', classname=\"title\"),\n FieldPanel('price', classname=\"full\"),\n FieldPanel('description', classname=\"full\"),\n ImageChooserPanel('image'),\n FieldPanel('tags'),\n InlinePanel('related_links', label=\"Related links\"),\n]\n\nProductPage.promote_panels = [\n MultiFieldPanel(Page.promote_panels, \"Common page configuration\"),\n ImageChooserPanel('feed_image'),\n]", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class ProductIndexPageRelatedLink(Orderable, RelatedLink):\n page = ParentalKey('products.ProductIndexPage', related_name='related_links')", "metadata": "root.ProductIndexPageRelatedLink", "header": "['module', '___EOS___']", "index": 23 }, { "content": "class ProductIndexPage(Page):\n subtitle = models.CharField(max_length=255, blank=True)\n intro = RichTextField(blank=True)\n\n indexed_fields = ('intro', )\n\n\n", "metadata": "root.ProductIndexPage", "header": "['module', '___EOS___']", "index": 27 }, { "content": " @property\n def products(self):\n # Get list of live blog pages that are descendants of this page\n products = ProductPage.objects.live().descendant_of(self)\n\n return products", "metadata": "root.ProductIndexPage.products", "header": "['class', 'ProductIndexPage', '(', 'Page', ')', ':', '___EOS___']", "index": 33 }, { "content": " @property\n def tag_list(self):\n tag_ids = ProductPageTag.objects.all().values_list('tag_id', flat=True)\n return Tag.objects.filter(pk__in=tag_ids)", "metadata": "root.ProductIndexPage.tag_list", "header": "['class', 'ProductIndexPage', '(', 'Page', ')', ':', '___EOS___']", "index": 40 }, { "content": " def get_context(self, request):\n # Get products\n products = self.products\n # Filter by tag\n tag = request.GET.get('tag')\n if tag:\n products = products.filter(tags__name=tag)\n\n # Pagination\n page = request.GET.get('page')\n paginator = Paginator(products, 12) # Show 10 products per page\n try:\n products = paginator.page(page)\n except PageNotAnInteger:\n products = paginator.page(1)\n except EmptyPage:\n products = paginator.page(paginator.num_pages)\n\n # Update template context\n context = super(ProductIndexPage, self).get_context(request)\n context['products'] = products\n return context", "metadata": "root.ProductIndexPage.get_context", "header": "['class', 'ProductIndexPage', '(', 'Page', ')', ':', '___EOS___']", "index": 45 }, { "content": "class ProductPageRelatedLink(Orderable, RelatedLink):\n page = ParentalKey('products.ProductPage', related_name='related_links')", "metadata": "root.ProductPageRelatedLink", "header": "['module', '___EOS___']", "index": 76 }, { "content": "class ProductPageTag(TaggedItemBase):\n content_object = ParentalKey(\n 'products.ProductPage', related_name='tagged_items'\n )\n ", "metadata": "root.ProductPageTag", "header": "['module', '___EOS___']", "index": 80 }, { "content": " def __unicode__(self):\n return self.name", "metadata": "root.ProductPageTag.__unicode__", "header": "['class', 'ProductPageTag', '(', 'TaggedItemBase', ')', ':', '___EOS___']", "index": 85 }, { "content": "class ProductPage(Page):\n price = models.CharField(max_length=255, blank=True)\n description = RichTextField(blank=True)\n tags = ClusterTaggableManager(through=ProductPageTag, blank=True)\n image = models.ForeignKey(\n Image,\n null=True,\n blank=True,\n on_delete=models.SET_NULL,\n related_name='+'\n )\n feed_image = models.ForeignKey(\n Image,\n null=True,\n blank=True,\n on_delete=models.SET_NULL,\n related_name='+'\n )\n\n indexed_fields = ('title', 'intro', 'biography')", "metadata": "root.ProductPage", "header": "['module', '___EOS___']", "index": 89 } ]

[ { "span": "from wagtail.wagtailsearch import index", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 39 }, { "span": "from wagtail.wagtailsnippets.models import register_snippet", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 59 }, { "span": "from wagtail.wagtailsnippets.edit_handlers import SnippetChooserPanel", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 69 }, { "span": "from utils.models import LinkFields, RelatedLink, CarouselItem", "start_line": 19, "start_column": 0, "end_line": 19, "end_column": 62 } ]

[]

1

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Unused import

Microsoft/ApplicationInsights-Python/applicationinsights/channel/contracts/Application.py

[ { "content": "import collections\nimport copy\nfrom .Utils import _write_complex_object\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Application(object):\n \"\"\"Data contract class for type Application.\n \"\"\"\n _defaults = collections.OrderedDict([\n ('ai.application.ver', None)\n ])\n \n \n \n \n ", "metadata": "root.Application", "header": "['module', '___EOS___']", "index": 4 }, { "content": " def __init__(self):\n \"\"\"Initializes a new instance of the class.\n \"\"\"\n self._values = {\n }\n self._initialize()", "metadata": "root.Application.__init__", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 11 }, { "content": " @property\n def ver(self):\n \"\"\"The ver property.\n \n Returns:\n (string). the property value. (defaults to: None)\n \"\"\"\n if 'ai.application.ver' in self._values:\n return self._values['ai.application.ver']\n return self._defaults['ai.application.ver']", "metadata": "root.Application.ver", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 18 }, { "content": " @ver.setter\n def ver(self, value):\n \"\"\"The ver property.\n \n Args:\n value (string). the property value.\n \"\"\"\n if value == self._defaults['ai.application.ver'] and 'ai.application.ver' in self._values:\n del self._values['ai.application.ver']\n else:\n self._values['ai.application.ver'] = value", "metadata": "root.Application.ver", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 29 }, { "content": " def _initialize(self):\n \"\"\"Initializes the current instance of the object.\n \"\"\"\n pass", "metadata": "root.Application._initialize", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 41 }, { "content": " def write(self):\n \"\"\"Writes the contents of this object and returns the content as a dict object.\n \n Returns:\n (dict). the object that represents the same data as the current instance.\n \"\"\"\n return _write_complex_object(self._defaults, self._values)", "metadata": "root.Application.write", "header": "['class', 'Application', '(', 'object', ')', ':', '___EOS___']", "index": 46 } ]

[ { "span": "import copy", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 11 } ]

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Unused import

xraypy/xraylarch/win32/setup_freeze.py

[ { "content": "\"\"\"\nsetup.py script for cx_Freeze\n\nUsage:\n python setup_freeze.py bdist_mac --iconfile=GSEMap.icns\n\nthen use disk utility to make a .dmg\n\"\"\"\n\nfrom cx_Freeze import setup, Executable\n\nimport os, sys\nimport wx\nimport wx.lib.agw.flatnotebook\nimport numpy, scipy, matplotlib\nmatplotlib.use('WXAgg')\nimport sqlalchemy\n\nfrom scipy.sparse.csgraph import _validation\nfrom scipy.io import netcdf\nnetcdf_open = netcdf.netcdf_file\n\nimport wxmplot\nfrom wxmplot.plotframe import PlotFrame\nimport larch\n\nimport Image\nimport epics\nimport Carbon\n\nlibca = epics.ca.initialize_libca()\nmpl_data_files = matplotlib.get_py2exe_datafiles()\n\nresource_files = ['../COPYING']\n## also: use\n## if getattr(sys, 'frozen', None) == 'macosx_app':\n## in lib/site_config.py to specify plugin path\n\nplugin_files = []\npsrc = \"/usr/share/larch\"\nfor dname in os.listdir('%s/plugins' % psrc):\n pname = '%s/plugins/%s' % (psrc, dname)\n if os.path.isdir(pname):\n flist = ['%s/%s' % (pname, f) for f in os.listdir(pname) if not f.endswith('.pyc')]\n plugin_files.append((\"larch/plugins/%s\" % dname, flist))\n\n\ndll_files = [(\"larch/dlls/darwin/\",\n ['%s/dlls/darwin/%s' % (psrc, f) for f in os.listdir('%s/dlls/darwin' % psrc)]\n )]\n\nDATA_FILES = []\n\nexe_opts = {# 'packages': ['wx', 'numpy','sqlalchemy'],\n 'includes': ['Carbon', 'Carbon.Appearance', 'ConfigParser',\n 'Image', 'ctypes', 'epics', 'epics.devices',\n 'fpformat', 'h5py', 'h5py._objects',\n 'h5py._proxy', 'h5py.defs', 'h5py.utils',\n 'matplotlib', 'numpy', 'scipy',\n 'scipy.constants', 'scipy.fftpack',\n 'scipy.io.matlab.mio5_utils',\n 'scipy.io.matlab.streams', 'scipy.io.netcdf',\n 'scipy.optimize', 'scipy.signal',\n 'skimage', 'skimage.exposure', 'wxutils',\n 'scipy.sparse.csgraph._validation', 'sqlalchemy',\n 'sqlalchemy.dialects.sqlite', 'sqlalchemy.orm',\n 'sqlalchemy.pool', 'sqlite3', 'wx', 'wx._core',\n 'wx.lib', 'wx.lib.agw', 'wx.lib.agw.flatnotebook',\n 'wx.lib.colourselect', 'wx.lib.masked',\n 'wx.lib.mixins', 'wx.lib.mixins.inspection',\n 'wx.lib.agw.pycollapsiblepane',\n 'wx.lib.newevent', 'wx.py', 'wxmplot', 'wxversion',\n 'xdrlib', 'xml.etree', 'xml.etree.cElementTree'],\n 'excludes': ['Tkinter', '_tkinter', 'Tkconstants', 'tcl',\n '_imagingtk', 'PIL._imagingtk', 'ImageTk',\n 'PIL.ImageTk', 'FixTk''_gtkagg', '_tkagg',\n 'matplotlib.tests',\n 'qt', 'PyQt4Gui', 'email', 'IPython'],\n # 'iconfile': 'GSEMap.icns',\n }\n\nappname = 'GSEMapViewer'\nappvers = '1.1'\nsetup(name = appname,\n version = appvers,\n description = \"GSECARS XRM MapViewer\",\n options = {'build_exe': exe_opts},\n data_files = mpl_data_files + dll_files, ## + plugin_files\n executables = [Executable('../bin/GSE_MapViewer', base=None)])\n\n# contents = 'build/%s-%s.app/Contents' % (appname, appvers)\n# contents = contents.replace(' ', '\\ ')\n# \n# def sys(cmd):\n# print ' >> ', cmd\n# os.system(cmd)\n# \n# sys(\"cp -pr GSEMap.icns %s/Resources/.\" % contents)\n# sys(\"cp -pr ../dlls/darwin/* %s/MacOS/.\" % contents)\n# \n# try:\n# os.makedirs(\"%s/Resources/larch/\" % contents)\n# except:\n# pass\n# \n# for subdir in ('modules', 'plugins', 'dlls'):\n# sys(\"cp -pr ../%s %s/Resources/larch/.\" % (subdir, contents))\n# \n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import os, sys", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 14 }, { "span": "import wx", "start_line": 12, "start_column": 0, "end_line": 12, "end_column": 9 }, { "span": "import wx.lib.agw.flatnotebook", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 30 }, { "span": "import numpy, scipy, matplotlib", "start_line": 14, "start_column": 0, "end_line": 14, "end_column": 31 }, { "span": "import sqlalchemy", "start_line": 16, "start_column": 0, "end_line": 16, "end_column": 17 }, { "span": "from scipy.sparse.csgraph import _validation", "start_line": 18, "start_column": 0, "end_line": 18, "end_column": 44 }, { "span": "import wxmplot", "start_line": 22, "start_column": 0, "end_line": 22, "end_column": 14 }, { "span": "from wxmplot.plotframe import PlotFrame", "start_line": 23, "start_column": 0, "end_line": 23, "end_column": 39 }, { "span": "import larch", "start_line": 24, "start_column": 0, "end_line": 24, "end_column": 12 }, { "span": "import Image", "start_line": 26, "start_column": 0, "end_line": 26, "end_column": 12 }, { "span": "import Carbon", "start_line": 28, "start_column": 0, "end_line": 28, "end_column": 13 } ]

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Unused import

douban/dpark/dpark/env.py

[ { "content": "import os\nimport logging\nimport time\nimport socket\nimport shutil\nimport uuid\n\nimport zmq\n\nfrom dpark import util\nimport dpark.conf as conf\n\nlogger = logging.getLogger(__name__)\n\n\n\nenv = DparkEnv()\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class DparkEnv:\n environ = {}\n\n\n\n\n", "metadata": "root.DparkEnv", "header": "['module', '___EOS___']", "index": 15 }, { "content": " @classmethod\n def register(cls, name, value):\n cls.environ[name] = value", "metadata": "root.DparkEnv.register", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 18 }, { "content": " @classmethod\n def get(cls, name, default=None):\n return cls.environ.get(name, default)", "metadata": "root.DparkEnv.get", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 22 }, { "content": " def __init__(self):\n self.started = False", "metadata": "root.DparkEnv.__init__", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 26 }, { "content": " def start(self, isMaster, environ={}):\n if self.started:\n return\n logger.debug(\"start env in %s: %s %s\", os.getpid(), isMaster, environ)\n self.isMaster = isMaster\n if isMaster:\n roots = conf.DPARK_WORK_DIR\n if isinstance(roots, str):\n roots = roots.split(',')\n name = '%s-%s' % (socket.gethostname(), uuid.uuid4())\n self.workdir = [os.path.join(root, name) for root in roots]\n try:\n for d in self.workdir:\n util.mkdir_p(d)\n except OSError as e:\n if environ.get('is_local', False):\n raise e\n\n self.environ['SERVER_URI'] = 'file://' + self.workdir[0]\n self.environ['WORKDIR'] = self.workdir\n self.environ['COMPRESS'] = util.COMPRESS\n else:\n self.environ.update(environ)\n if self.environ['COMPRESS'] != util.COMPRESS:\n raise Exception(\"no %s available\" % self.environ['COMPRESS'])\n\n self.ctx = zmq.Context()\n\n from dpark.tracker import TrackerServer, TrackerClient\n if isMaster:\n self.trackerServer = TrackerServer()\n self.trackerServer.start()\n addr = self.trackerServer.addr\n env.register('TrackerAddr', addr)\n else:\n addr = env.get('TrackerAddr')\n\n self.trackerClient = TrackerClient(addr)\n\n from dpark.cache import CacheTracker\n self.cacheTracker = CacheTracker()\n\n from dpark.shuffle import LocalFileShuffle, MapOutputTracker\n LocalFileShuffle.initialize(isMaster)\n self.mapOutputTracker = MapOutputTracker()\n from dpark.shuffle import ParallelShuffleFetcher\n self.shuffleFetcher = ParallelShuffleFetcher(2)\n\n from dpark.broadcast import start_manager\n start_manager(isMaster)\n\n self.started = True\n logger.debug(\"env started\")", "metadata": "root.DparkEnv.start", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 29 }, { "content": " def stop(self):\n if not getattr(self, 'started', False):\n return\n logger.debug(\"stop env in %s\", os.getpid())\n self.shuffleFetcher.stop()\n self.cacheTracker.stop()\n self.mapOutputTracker.stop()\n if self.isMaster:\n self.trackerServer.stop()\n from dpark.broadcast import stop_manager\n stop_manager()\n\n logger.debug(\"cleaning workdir ...\")\n for d in self.workdir:\n shutil.rmtree(d, True)\n logger.debug(\"done.\")\n\n self.started = False", "metadata": "root.DparkEnv.stop", "header": "['class', 'DparkEnv', ':', '___EOS___']", "index": 83 } ]

[ { "span": "import time", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 11 } ]

[]

1

false

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Unused import

thasso/pyjip/jip/__init__.py

[ { "content": "#!/usr/bin/env python\n\"\"\"JIP script execution and pipeline system\"\"\"\nimport jip.logger\nfrom jip.logger import log_level\nfrom jip.tools import tool, pytool, pipeline, Scanner, ValidationError, Tool,\\\n ToolNotFoundException\nfrom jip.jobs import set_state\nfrom jip.jobs import create_groups, create_jobs, create_executions\nfrom jip.jobs import run_job\nfrom jip.jobs import submit_job\nfrom jip.pipelines import Pipeline\nfrom jip.profiles import Profile\nfrom jip.configuration import Config\nfrom jip.options import ParserException\nfrom jip.db import STATE_DONE, STATE_QUEUED, STATE_CANCELED, STATE_HOLD, \\\n STATE_FAILED\n\n__version__ = \"0.6\"\n\nconfig = Config()\nscanner = Scanner(jip_path=config.get('jip_path'),\n jip_modules=config.get('jip_modules', []))\nfind = scanner.find\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import jip.logger", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 17 }, { "span": "from jip.logger import log_level", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 32 }, { "span": "from jip.tools import tool, pytool, pipeline, Scanner, ValidationError, Tool,\\\n ToolNotFoundException", "start_line": 4, "start_column": 0, "end_line": 5, "end_column": 25 }, { "span": "from jip.jobs import set_state", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 30 }, { "span": "from jip.jobs import create_groups, create_jobs, create_executions", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 66 }, { "span": "from jip.jobs import run_job", "start_line": 8, "start_column": 0, "end_line": 8, "end_column": 28 }, { "span": "from jip.jobs import submit_job", "start_line": 9, "start_column": 0, "end_line": 9, "end_column": 31 }, { "span": "from jip.pipelines import Pipeline", "start_line": 10, "start_column": 0, "end_line": 10, "end_column": 34 }, { "span": "from jip.profiles import Profile", "start_line": 11, "start_column": 0, "end_line": 11, "end_column": 32 }, { "span": "from jip.options import ParserException", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 39 }, { "span": "from jip.db import STATE_DONE, STATE_QUEUED, STATE_CANCELED, STATE_HOLD, \\\n STATE_FAILED", "start_line": 14, "start_column": 0, "end_line": 15, "end_column": 16 } ]

[]

1

false

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Except block handles 'BaseException'

Djacket/djacket/core/backend/git/http.py

[ { "content": " def get_http_info_refs(self):\n \"\"\"\n Returns a HttpResponse for info/refs requests.\n \"\"\"\n\n try:\n self.set_response_header()\n self.set_response_first_line()\n self.set_response_payload(GIT_HTTP_INFO_REFS)\n return self\n except BaseException as e:\n return get_http_error(e)", "metadata": "root.GitResponse.get_http_info_refs", "header": "['class', 'GitResponse', '(', 'HttpResponse', ')', ':', '___EOS___']", "index": 134 }, { "content": " def get_http_service_rpc(self):\n \"\"\"\n Returns a HttpResponse to 'git-upload-pack', 'git-receive-pack' requests.\n \"\"\"\n\n try:\n self.set_response_header()\n if self.service == GIT_SERVICE_RECEIVE_PACK:\n self.set_response_payload(GIT_HTTP_SERVICE_RECEIVE_PACK)\n elif self.service == GIT_SERVICE_UPLOAD_PACK:\n self.set_response_payload(GIT_HTTP_SERVICE_UPLOAD_PACK)\n return self\n except BaseException as e:\n return get_http_error(e)", "metadata": "root.GitResponse.get_http_service_rpc", "header": "['class', 'GitResponse', '(', 'HttpResponse', ')', ':', '___EOS___']", "index": 148 } ]

[ { "span": "except BaseException as e:", "start_line": 144, "start_column": 8, "end_line": 144, "end_column": 34 }, { "span": "except BaseException as e:", "start_line": 160, "start_column": 8, "end_line": 160, "end_column": 34 } ]

[]

1

true

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Except block handles 'BaseException'

apache/climate/obs4MIPs/Toolbox/ESGFresources.py

[ { "content": " def __init__(self,rcFile):\n '''\n Read CMIP5 Table and convert into a dictionary\n strip quote double quote, leading and trailing white space\n from key and value.\n '''\n f=open( rcFile, 'r')\n lines=f.readlines()\n f.close()\n\n self.resources=dict([(key.strip(), value.strip(),) \n for line in lines if line != '\\n' \\\n and line[0] != \"#\" \n for (key, value) in\n [line.strip().\\\n replace(\"'\",\"\").\\\n replace(\"\\\"\",\"\").\\\n rstrip().\\\n split(\"=\")]])\n\n for key in self.resources.keys():\n self.resources[key]=self.resources[key].replace(\"\\\\\",\"\\\"\")\n \n self.xcl=None\n try:\n self.xcl=self.resources['excel_file']\n rc=self.ReadXCL()\n except:\n pass", "metadata": "root.ESGFresources.__init__", "header": "['class', 'ESGFresources', ':', '___EOS___']", "index": 32 }, { "content": " def ReadXCL(self):\n '''\n Read Excel Table and fill rc variable related field.\n '''\n try:\n import xlrd\n except:\n print \"****** Could not find xlrd Python Package ****\"\n print \"****** Please install xlrd package to read excel files ****\"\n\n if( os.path.isfile(self.xcl) ):\n\t\twb=xlrd.open_workbook(self.xcl)\n else:\n print \"****** Could not find \"+self.xcl+\" file ****\"\n print \"****** Please check excel file name ****\"\n raise NameError(self.xcl)\n\n sheet=wb.sheet_by_name('Variables')\n\n self.resources['cmor_var'] = [ sheet.row( i )[ 0 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n self.resources['original_var'] = [ sheet.row( i )[ 1 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n self.resources['original_units']=[ sheet.row( i )[ 2 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n self.resources['level'] =[ sheet.row( i )[ 3 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2]\n \n self.resources['equation'] =[ sheet.row( i )[ 6 ].value.\\\n encode('ascii','ignore') \\\n for i in arange(sheet.nrows-2) + 2 ]\n\n # -----------------------------------------------------------------\n # Make sure it is a string. The main program will call eval on it.\n # -----------------------------------------------------------------\n self.resources['cmor_var'] = str(self.resources['cmor_var'] )\n self.resources['original_var'] = str(self.resources['original_var'])\n self.resources['original_units'] =str(self.resources['original_units'])\n self.resources['equation'] =str(self.resources['equation'])\n self.resources['level'] =str(self.resources['level'])\n return 1", "metadata": "root.ESGFresources.ReadXCL", "header": "['class', 'ESGFresources', ':', '___EOS___']", "index": 78 }, { "content": "def movefiles(rc): \n '''\n Change CMIP5 directory struture to obs4MIPS directory structure.\n Create new path and rename files following with new convention \n Remove old directory tree.\n '''\n # ----------------------\n # New path for obs4MIPS\n # ----------------------\n path = rc['institute_id' ] + '/' + \\\n rc['instrument' ] + '/' + \\\n rc['project_id' ] + '/' + \\\n rc['product' ] + '/' + \\\n rc['modeling_realm' ] + '/' + \\\n rc['cvrt_cmor_var' ] + '/' + \\\n rc['frequency' ] + '/' + \\\n rc['data_structure' ] + '/' + \\\n rc['institute_id' ] + '/' + \\\n rc['instrument' ] \n \n # -------------------------------------------------------------\n # For TRMM data set version_directory is set to 'false' so that\n # no version will be created in the directory\n # -------------------------------------------------------------\n try:\n rc['version_directory'] == 'false'\n pass\n except:\n path += '/V' + rc['processing_version'] + '/'\n\n # -----------------------------\n # Make sure the directory exist \n # ------------------------------\n try:\n os.makedirs(path)\n except:\n None\n\n # -----------------\n # Rename all files\n # -----------------\n cmorpath = rc['project_id' ] + '/' + \\\n rc['product' ] + '/' + \\\n rc['institute_id'] + '/' \n\n # -----------------\n # Manage attributes\n # -----------------\n for r,d,f in os.walk(cmorpath):\n for files in f:\n if files.endswith(\".nc\"):\n filetimestamp = files.split('_')[-1].strip(\".nc\")\n file = os.path.join(r,files)\n print file\n # -----------------\n # Delete attributes\n # ------------------\n Attr=CMORAttributes( file )\n DelGlbAttributes=eval(rc['DelGlbAttributes'].\\\n replace('\\\\','\\''))\n for attribute in DelGlbAttributes:\n print \"Deleting attribute: %s\" % attribute\n Attr.GlbDel(attribute)\n # -----------------\n # set attributes\n # ------------------\n SetGlbAttributes=eval(rc['SetGlbAttributes'].\\\n replace('\\\\','\\''))\n for (attribute,Value) in SetGlbAttributes:\n print \"Assigning attribute (%s,%s)\" % (attribute,Value)\n Attr.GlbSet(attribute,Value)\n Attr.close()\n\n source = ''\n if( rc['source_fn'] == 'SYNOPTIC' ):\n source = rc['SYNOPTIC']+\"z_\"\n elif( rc['source_fn'] != '' ):\n source = rc['source_fn'].split('_')[0] + '_'\n \n newfilename = rc['cvrt_cmor_var' ] + '_' + \\\n rc['instrument' ] + '-' + \\\n source + \\\n rc['processing_level' ] + '_v'+ \\\n rc['processing_version'] + '_' + \\\n filetimestamp + '.nc'\n \n newfilename = os.path.join(path,newfilename)\n # -----------\n # Move files\n # -----------\n print file\n print newfilename\n os.rename(file,newfilename)\n\n \n # ----------------\n # Remove cmor path\n # ----------------\n shutil.rmtree( rc['project_id'] )\n return 0", "metadata": "root.movefiles", "header": "['module', '___EOS___']", "index": 133 } ]

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[]

1

true

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Unused local variable

pyjs/pyjs/examples/libtest/CompileTest.py

[ { "content": " def test_callfunc_expressions(self):\n s = \"123\"\n x = ('a' + 'b').strip()\n (\" \" + s).rstrip()\n #self.fail(\"Callfunc over expressions, #591\")", "metadata": "root.CompileTest.test_callfunc_expressions", "header": "['class', 'CompileTest', '(', 'UnitTest', '.', 'UnitTest', ')', ':', '___EOS___']", "index": 27 }, { "content": " def test_subscript_tuple(self):\n d = {}\n d[(1,2)] = 3\n x = d[1,2]\n d[3,4] = 5\n #self.fail(\"Tuple subscripts issue #496\")", "metadata": "root.CompileTest.test_subscript_tuple", "header": "['class', 'CompileTest', '(', 'UnitTest', '.', 'UnitTest', ')', ':', '___EOS___']", "index": 41 } ]

[ { "span": "x ", "start_line": 29, "start_column": 8, "end_line": 29, "end_column": 9 }, { "span": "x ", "start_line": 44, "start_column": 8, "end_line": 44, "end_column": 9 } ]

[]

1

true

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Unused local variable

b3mb4m/shellsploit-framework/shell/inject/Linux86/inject.py

[ { "content": "def injectmex86(pid, shellcode):\n from sys import platform\n\n if platform.startswith('win'):\n print (\"\\nPtrace not working on windows machines ..\\n\")\n return False\n else:\n try:\n from ptrace.debugger.debugger import PtraceDebugger\n from ptrace.debugger.debugger import PtraceProcess\n except ImportError: \n print (\"\\nYou must install ptrace library before use this script.\\n\")\n return False\n else:\n try:\n dbg = PtraceDebugger()\n process = dbg.addProcess(int(pid), False)\n eip = process.getInstrPointer()\n bytes = process.writeBytes(eip, shellcode.replace(\"\\\\x\", \"\").decode(\"hex\"))\n process.setreg(\"ebx\", 0)\n process.cont()\n except Exception as error:\n print (error)\n print (\"\\nPlease do not forget report !\\n\")\n else:\n print (\"\\nInject complate !\\n\")", "metadata": "root.injectmex86", "header": "['module', '___EOS___']", "index": 9 } ]

[ { "span": "bytes ", "start_line": 27, "start_column": 16, "end_line": 27, "end_column": 21 } ]

[]

1

true

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Unused local variable

lukesneeringer/django-pgfields/tests/composite/tests.py

[ { "content": " def test_invalid_composite_instance_init(self):\n \"\"\"Test that if I send duplicate values to a CompositeInstance,\n that we raise the appropriate exception.\n \"\"\"\n with self.assertRaises(TypeError):\n monarch = Monarch('King', title='King', name='Elessar', suffix=2)", "metadata": "root.CompositeTestCase.test_invalid_composite_instance_init", "header": "['class', 'CompositeTestCase', '(', 'TestCase', ')', ':', '___EOS___']", "index": 91 }, { "content": " def test_invalid_composite_instance_key(self):\n \"\"\"Test that an invalid composite instance key raises a KeyError\n as expected.\n \"\"\"\n with self.assertRaises(KeyError):\n monarch = Monarch(title='King', label='Elessar', suffix=2)", "metadata": "root.CompositeTestCase.test_invalid_composite_instance_key", "header": "['class', 'CompositeTestCase', '(', 'TestCase', ')', ':', '___EOS___']", "index": 98 }, { "content": " def test_related_field_raises(self):\n \"\"\"Test that we cannot create a CompositeField subclass with\n any sort of RelatedField as a member.\n \"\"\"\n with self.assertRaises(TypeError):\n class CitizenField(models.CompositeField):\n first_name = models.CharField(max_length=20)\n last_name = models.CharField(max_length=30)\n resident_of = models.ForeignKey(Monarchy)\n with self.assertRaises(TypeError):\n class CitizenField(models.CompositeField):\n first_name = models.CharField(max_length=20)\n last_name = models.CharField(max_length=30)\n authors = models.ManyToManyField(Author)", "metadata": "root.CompositeTestCase.test_related_field_raises", "header": "['class', 'CompositeTestCase', '(', 'TestCase', ')', ':', '___EOS___']", "index": 105 } ]

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[]

1

true

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Except block handles 'BaseException'

pgiri/asyncoro/py2/asyncoro/__init__.py

[ { "content": "\"\"\"\nThis file is part of asyncoro; see http://asyncoro.sourceforge.net\nfor details.\n\nThis module provides framework for concurrent, asynchronous network\nprogramming with coroutines, asynchronous completions and message\npassing. Other modules in asyncoro download package provide API for\ndistributed programming, asynchronous pipes, distributed concurrent\ncommunicating processes.\n\"\"\"\n\n__author__ = \"Giridhar Pemmasani ([email protected])\"\n__email__ = \"[email protected]\"\n__copyright__ = \"Copyright (c) 2012-2014 Giridhar Pemmasani\"\n__contributors__ = []\n__maintainer__ = \"Giridhar Pemmasani ([email protected])\"\n__license__ = \"MIT\"\n__url__ = \"http://asyncoro.sourceforge.net\"\n__status__ = \"Production\"\n__version__ = \"4.0\"\n\n__all__ = ['AsyncSocket', 'AsynCoroSocket', 'Coro', 'AsynCoro',\n 'Lock', 'RLock', 'Event', 'Condition', 'Semaphore',\n 'HotSwapException', 'MonitorException', 'Location', 'Channel',\n 'CategorizeMessages', 'AsyncThreadPool', 'AsyncDBCursor',\n 'MetaSingleton', 'logger', 'serialize', 'unserialize']\n\nimport time\nimport threading\nimport functools\nimport socket\nimport inspect\nimport traceback\nimport select\nimport sys\nimport types\nimport struct\nimport re\nimport logging\nimport errno\nimport platform\nimport ssl\nfrom heapq import heappush, heappop\nfrom bisect import bisect_left\nimport Queue as queue\nimport atexit\nimport collections\nimport cPickle as pickle\nimport copy\n\nif platform.system() == 'Windows':\n from errno import WSAEINPROGRESS as EINPROGRESS\n from errno import WSAEWOULDBLOCK as EWOULDBLOCK\n from errno import WSAEINVAL as EINVAL\n from time import clock as _time\n _time()\nelse:\n from errno import EINPROGRESS\n from errno import EWOULDBLOCK\n from errno import EINVAL\n from time import time as _time\n\n\n\n\n\n\n\n\n\n\nlogger = Logger('asyncoro')\n\n\n\n\nif platform.system() == 'Windows':\n # use IOCP if pywin32 (http://pywin32.sf.net) is installed\n try:\n import win32file\n import win32event\n import pywintypes\n import winerror\n except:\n logger.warning('Could not load pywin32 for I/O Completion Ports; '\n 'using inefficient polling for sockets')\n else:\n # for UDP we need 'select' polling (pywin32 doesn't yet support\n # UDP); _AsyncPoller below is combination of the other\n # _AsyncPoller for epoll/poll/kqueue/select and _SelectNotifier\n # below. (Un)fortunately, most of it is duplicate code\n\n\n\n\nif not isinstance(getattr(sys.modules[__name__], '_AsyncNotifier', None), MetaSingleton):\n\n\n\n AsyncSocket = _AsyncSocket\n _AsyncNotifier = _AsyncPoller\n\n\nAsynCoroSocket = AsyncSocket\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": " def _async_recv(self, bufsize, *args):\n \"\"\"Internal use only; use 'recv' with 'yield' instead.\n\n Asynchronous version of socket recv method.\n \"\"\"\n def _recv(self, bufsize, *args):\n try:\n buf = self._rsock.recv(bufsize, *args)\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(*sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(*sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)\n\n self._read_task = functools.partial(_recv, self, bufsize, *args)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)\n if self._certfile and self._rsock.pending():\n try:\n buf = self._rsock.recv(bufsize)\n except socket.error as err:\n if err.args[0] != EWOULDBLOCK:\n self._read_task = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro.throw(*sys.exc_info())\n else:\n if buf:\n self._read_task = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)", "metadata": "root._AsyncSocket._async_recv", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 361 }, { "content": " def _async_recvall(self, bufsize, *args):\n \"\"\"Internal use only; use 'recvall' with 'yield' instead.\n\n Receive exactly bufsize bytes. If socket's timeout is set and\n it expires before all the data could be read, it returns\n partial data read if any data has been read at all. If no data\n has been read before timeout, then it causes 'socket.timeout'\n exception to be thrown.\n \"\"\"\n def _recvall(self, view, *args):\n try:\n recvd = self._rsock.recv_into(view, len(view), *args)\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(*sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(*sys.exc_info())\n else:\n if recvd:\n view = view[recvd:]\n if len(view) == 0:\n buf = str(self._read_result)\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)\n else:\n if self._timeout:\n self._notifier._del_timeout(self)\n self._notifier._add_timeout(self)\n self._read_task = functools.partial(_recvall, self, view, *args)\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_('')\n\n self._read_result = bytearray(bufsize)\n view = memoryview(self._read_result)\n self._read_task = functools.partial(_recvall, self, view, *args)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)\n if self._certfile and self._rsock.pending():\n try:\n recvd = self._rsock.recv_into(view, bufsize)\n except socket.error as err:\n if err.args[0] != EWOULDBLOCK:\n self._read_task = self._read_result = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro.throw(*sys.exc_info())\n else:\n if recvd == bufsize:\n buf = str(self._read_result)\n self._read_task = self._read_result = None\n self._notifier.clear(self, _AsyncPoller._Read)\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(buf)\n elif recvd:\n view = view[recvd:]\n self._read_task = functools.partial(_recvall, self, view, *args)", "metadata": "root._AsyncSocket._async_recvall", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 408 }, { "content": " def _async_recvfrom(self, *args):\n \"\"\"Internal use only; use 'recvfrom' with 'yield' instead.\n\n Asynchronous version of socket recvfrom method.\n \"\"\"\n def _recvfrom(self, *args):\n try:\n res = self._rsock.recvfrom(*args)\n except:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro.throw(*sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Read)\n self._read_task = None\n coro, self._read_coro = self._read_coro, None\n coro._proceed_(res)\n\n self._read_task = functools.partial(_recvfrom, self, *args)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)", "metadata": "root._AsyncSocket._async_recvfrom", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 495 }, { "content": " def _async_send(self, *args):\n \"\"\"Internal use only; use 'send' with 'yield' instead.\n\n Asynchronous version of socket send method.\n \"\"\"\n def _send(self, *args):\n try:\n sent = self._rsock.send(*args)\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(*sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(*sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro._proceed_(sent)\n\n self._write_task = functools.partial(_send, self, *args)\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)", "metadata": "root._AsyncSocket._async_send", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 519 }, { "content": " def _async_sendto(self, *args):\n \"\"\"Internal use only; use 'sendto' with 'yield' instead.\n\n Asynchronous version of socket sendto method.\n \"\"\"\n def _sendto(self, *args):\n try:\n sent = self._rsock.sendto(*args)\n except:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(*sys.exc_info())\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro._proceed_(sent)\n\n self._write_task = functools.partial(_sendto, self, *args)\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)", "metadata": "root._AsyncSocket._async_sendto", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 551 }, { "content": " def _async_sendall(self, data):\n \"\"\"Internal use only; use 'sendall' with 'yield' instead.\n\n Asynchronous version of socket sendall method. If socket's\n timeout is set and it expires before all the data could be\n sent, it returns the length of data sent if any data is\n sent. If no data has been sent before timeout, then it causes\n 'socket.timeout' exception to be thrown.\n \"\"\"\n def _sendall(self, data_len):\n try:\n sent = self._rsock.send(self._write_result)\n if sent < 0:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(*sys.exc_info())\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n pass\n else:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(*sys.exc_info())\n except:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(*sys.exc_info())\n else:\n if sent > 0:\n self._write_result = self._write_result[sent:]\n if len(self._write_result) == 0:\n self._notifier.clear(self, _AsyncPoller._Write)\n self._write_task = self._write_result = None\n coro, self._write_coro = self._write_coro, None\n coro._proceed_(None)\n elif self._timeout:\n self._notifier._del_timeout(self)\n self._notifier._add_timeout(self)\n\n self._write_result = buffer(data)\n self._write_task = functools.partial(_sendall, self, len(data))\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)", "metadata": "root._AsyncSocket._async_sendall", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 575 }, { "content": " def _async_accept(self):\n \"\"\"Internal use only; use 'accept' with 'yield' instead.\n\n Asynchronous version of socket accept method. Socket in\n returned pair is asynchronous socket (instance of\n AsyncSocket with blocking=False).\n \"\"\"\n def _accept(self):\n conn, addr = self._rsock.accept()\n self._read_task = None\n self._notifier.unregister(self)\n\n if self._certfile:\n if not self.ssl_server_ctx and hasattr(ssl, 'create_default_context'):\n self.ssl_server_ctx = ssl.create_default_context(ssl.Purpose.CLIENT_AUTH)\n self.ssl_server_ctx.load_cert_chain(certfile=self._certfile,\n keyfile=self._keyfile)\n\n def _ssl_handshake(conn, addr):\n try:\n conn._rsock.do_handshake()\n except ssl.SSLError as err:\n if (err.args[0] == ssl.SSL_ERROR_WANT_READ or\n err.args[0] == ssl.SSL_ERROR_WANT_WRITE):\n pass\n else:\n conn._read_task = conn._write_task = None\n coro, conn._read_coro = conn._read_coro, None\n conn._write_coro = None\n conn.close()\n coro.throw(*sys.exc_info())\n except:\n conn._read_task = conn._write_task = None\n coro, conn._read_coro = conn._read_coro, None\n conn._write_coro = None\n conn.close()\n coro.throw(*sys.exc_info())\n else:\n conn._read_task = conn._write_task = None\n coro, conn._read_coro = conn._read_coro, None\n conn._notifier.clear(conn)\n coro._proceed_((conn, addr))\n conn = AsyncSocket(conn, blocking=False, keyfile=self._keyfile,\n certfile=self._certfile, ssl_version=self._ssl_version)\n try:\n if self.ssl_server_ctx:\n conn._rsock = self.ssl_server_ctx.wrap_socket(conn._rsock,\n server_side=True,\n do_handshake_on_connect=False)\n else:\n conn._rsock = ssl.wrap_socket(conn._rsock, certfile=self._certfile,\n keyfile=self._keyfile,\n ssl_version=self._ssl_version,\n server_side=True,\n do_handshake_on_connect=False)\n except:\n coro, self._read_coro = self._read_coro, None\n conn.close()\n coro.throw(*sys.exc_info())\n else:\n conn._read_task = conn._write_task = functools.partial(_ssl_handshake, conn, addr)\n conn._read_coro = conn._write_coro = self._read_coro\n self._read_coro = None\n conn._notifier.add(conn, _AsyncPoller._Read | _AsyncPoller._Write)\n conn._read_task()\n else:\n coro, self._read_coro = self._read_coro, None\n conn = AsyncSocket(conn, blocking=False)\n coro._proceed_((conn, addr))\n\n self._read_task = functools.partial(_accept, self)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n self._notifier.add(self, _AsyncPoller._Read)", "metadata": "root._AsyncSocket._async_accept", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 637 }, { "content": " def _async_connect(self, *args):\n \"\"\"Internal use only; use 'connect' with 'yield' instead.\n\n Asynchronous version of socket connect method.\n \"\"\"\n def _connect(self, *args):\n err = self._rsock.getsockopt(socket.SOL_SOCKET, socket.SO_ERROR)\n if err:\n self._notifier.unregister(self)\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n coro.throw(socket.error(err))\n elif self._certfile:\n def _ssl_handshake(self):\n try:\n self._rsock.do_handshake()\n except ssl.SSLError as err:\n if (err.args[0] == ssl.SSL_ERROR_WANT_READ or\n err.args[0] == ssl.SSL_ERROR_WANT_WRITE):\n pass\n else:\n self._read_task = self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._read_coro = None\n self.close()\n coro.throw(*sys.exc_info())\n except:\n self._read_task = self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._read_coro = None\n self.close()\n coro.throw(*sys.exc_info())\n else:\n self._notifier.clear(self)\n self._read_task = self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._read_coro = None\n coro._proceed_(0)\n\n try:\n # TODO: provide 'ca_certs' as special parameter to 'accept'?\n # For now this setup wrks for self-signed certs\n self._rsock = ssl.wrap_socket(self._rsock, ca_certs=self._certfile,\n cert_reqs=ssl.CERT_REQUIRED, server_side=False,\n do_handshake_on_connect=False)\n except:\n coro, self._write_coro = self._write_coro, None\n self.close()\n coro.throw(*sys.exc_info())\n else:\n self._read_task = self._write_task = functools.partial(_ssl_handshake, self)\n self._read_coro = self._write_coro\n self._notifier.add(self, _AsyncPoller._Read)\n self._write_task()\n else:\n self._write_task = None\n coro, self._write_coro = self._write_coro, None\n self._notifier.clear(self, _AsyncPoller._Write)\n coro._proceed_(0)\n\n self._write_task = functools.partial(_connect, self, *args)\n self._write_coro = AsynCoro.cur_coro()\n self._write_coro._await_()\n self._notifier.add(self, _AsyncPoller._Write)\n try:\n self._rsock.connect(*args)\n except socket.error as e:\n if e.args[0] == EINPROGRESS or e.args[0] == EWOULDBLOCK:\n pass\n else:\n raise", "metadata": "root._AsyncSocket._async_connect", "header": "['class', '_AsyncSocket', '(', 'object', ')', ':', '___EOS___']", "index": 712 }, { "content": " def _iocp_connect(self, host_port):\n \"\"\"Internal use only; use 'connect' with 'yield' instead.\n \"\"\"\n def _connect(self, err, n):\n def _ssl_handshake(self, err, n):\n try:\n self._rsock.do_handshake()\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n err, n = win32file.WSARecv(self._fileno, self._read_result,\n self._read_overlap, 0)\n elif err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n err, n = win32file.WSASend(self._fileno, '', self._read_overlap, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro = self._read_coro\n self.close()\n if coro:\n coro.throw(*sys.exc_info())\n except:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro = self._read_coro\n self.close()\n if err != winerror.ERROR_OPERATION_ABORTED and coro:\n coro.throw(socket.error(err))\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_(0)\n\n if err:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n if err == winerror.ERROR_OPERATION_ABORTED:\n self._read_coro = None\n else:\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro.throw(socket.error(err))\n else:\n self._rsock.setsockopt(socket.SOL_SOCKET,\n win32file.SO_UPDATE_CONNECT_CONTEXT, '')\n if self._certfile:\n self._rsock = ssl.wrap_socket(self._rsock, ca_certs=self._certfile,\n cert_reqs=ssl.CERT_REQUIRED,\n server_side=False,\n do_handshake_on_connect=False)\n self._read_result = win32file.AllocateReadBuffer(0)\n self._read_overlap.object = functools.partial(_ssl_handshake, self)\n self._read_overlap.object(None, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_(0)\n\n # ConnectEX requires socket to be bound!\n try:\n self._rsock.bind(('0.0.0.0', 0))\n except socket.error as exc:\n if exc[0] != EINVAL:\n raise\n self._read_overlap.object = functools.partial(_connect, self)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n if self._timeout:\n self._notifier._add_timeout(self)\n err, n = win32file.ConnectEx(self._rsock, host_port, self._read_overlap)\n if err and err != winerror.ERROR_IO_PENDING:\n self._read_overlap.object = self._read_result = self._read_coro = None\n raise socket.error(err)", "metadata": "root.AsyncSocket._iocp_connect", "header": "['class', 'AsyncSocket', '(', '_AsyncSocket', ')', ':', '___EOS___']", "index": 1451 }, { "content": " def _iocp_accept(self):\n \"\"\"Internal use only; use 'accept' with 'yield'\n instead. Socket in returned pair is asynchronous\n socket (instance of AsyncSocket with blocking=False).\n \"\"\"\n def _accept(self, conn, err, n):\n def _ssl_handshake(self, conn, addr, err, n):\n try:\n conn._rsock.do_handshake()\n except ssl.SSLError as err:\n if err.args[0] == ssl.SSL_ERROR_WANT_READ:\n err, n = win32file.WSARecv(conn._fileno, self._read_result,\n self._read_overlap, 0)\n elif err.args[0] == ssl.SSL_ERROR_WANT_WRITE:\n err, n = win32file.WSASend(conn._fileno, '', self._read_overlap, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n conn.close()\n if coro:\n coro.throw(*sys.exc_info())\n except:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n conn.close()\n if err != winerror.ERROR_OPERATION_ABORTED and coro:\n coro.throw(socket.error(err))\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_((conn, addr))\n\n if err:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if err != winerror.ERROR_OPERATION_ABORTED and coro:\n coro.throw(socket.error(err))\n else:\n family, laddr, raddr = win32file.GetAcceptExSockaddrs(conn, self._read_result)\n # TODO: unpack raddr if family != AF_INET\n conn._rsock.setsockopt(socket.SOL_SOCKET, win32file.SO_UPDATE_ACCEPT_CONTEXT,\n struct.pack('P', self._fileno))\n if self._certfile:\n if not self.ssl_server_ctx and hasattr(ssl, 'create_default_context'):\n self.ssl_server_ctx = ssl.create_default_context(ssl.Purpose.CLIENT_AUTH)\n self.ssl_server_ctx.load_cert_chain(certfile=self._certfile,\n keyfile=self._keyfile)\n\n if self.ssl_server_ctx:\n conn._rsock = self.ssl_server_ctx.wrap_socket(conn._rsock,\n server_side=True,\n do_handshake_on_connect=False)\n else:\n conn._rsock = ssl.wrap_socket(conn._rsock, certfile=self._certfile,\n keyfile=self._keyfile,\n server_side=True,\n ssl_version=self._ssl_version,\n do_handshake_on_connect=False)\n\n self._read_result = win32file.AllocateReadBuffer(0)\n self._read_overlap.object = functools.partial(_ssl_handshake, self,\n conn, raddr)\n self._read_overlap.object(None, 0)\n else:\n if self._timeout and self._notifier:\n self._notifier._del_timeout(self)\n self._read_overlap.object = self._read_result = None\n coro, self._read_coro = self._read_coro, None\n if coro:\n coro._proceed_((conn, raddr))\n\n sock = socket.socket(self._rsock.family, self._rsock.type, self._rsock.proto)\n conn = AsyncSocket(sock, keyfile=self._keyfile, certfile=self._certfile,\n ssl_version=self._ssl_version)\n self._read_result = win32file.AllocateReadBuffer(win32file.CalculateSocketEndPointSize(sock))\n self._read_overlap.object = functools.partial(_accept, self, conn)\n self._read_coro = AsynCoro.cur_coro()\n self._read_coro._await_()\n if self._timeout:\n self._notifier._add_timeout(self)\n err = win32file.AcceptEx(self._fileno, conn._fileno, self._read_result,\n self._read_overlap)\n if err and err != winerror.ERROR_IO_PENDING:\n self._read_overlap.object = self._read_result = self._read_coro = None\n raise socket.error(err)", "metadata": "root.AsyncSocket._iocp_accept", "header": "['class', 'AsyncSocket', '(', '_AsyncSocket', ')', ':', '___EOS___']", "index": 1533 }, { "content": " def poll(self, timeout):\n \"\"\"Calls 'task' method of registered fds when there is a\n read/write event for it.\n \"\"\"\n\n if timeout == 0:\n poll_timeout = timeout\n elif self._timeouts:\n poll_timeout = self._timeouts[0][0] - _time()\n if timeout is not None:\n poll_timeout = min(timeout, poll_timeout)\n poll_timeout *= self.timeout_multiplier\n elif timeout is None:\n poll_timeout = _AsyncPoller._Block\n else:\n poll_timeout = timeout * self.timeout_multiplier\n\n try:\n events = self._poller.poll(poll_timeout)\n except:\n logger.debug('poll failed')\n logger.debug(traceback.format_exc())\n # prevent tight loops\n time.sleep(5)\n return\n try:\n for fileno, event in events:\n fd = self._fds.get(fileno, None)\n if fd is None:\n if event != _AsyncPoller._Hangup:\n logger.debug('invalid fd for event %s', event)\n continue\n if event & _AsyncPoller._Read:\n if fd._read_task is None:\n logger.debug('fd %s is not registered for read; unregistering it',\n fd._fileno)\n self.unregister(fd)\n else:\n fd._read_task()\n elif event & _AsyncPoller._Write:\n if fd._write_task is None:\n logger.debug('fd %s is not registered for write; unregistering it',\n fd._fileno)\n self.unregister(fd)\n else:\n fd._write_task()\n elif event & _AsyncPoller._Hangup:\n fd._eof()\n elif event & _AsyncPoller._Error:\n logger.warning('error on fd %s', fd._fileno)\n self.unregister(fd)\n except:\n logger.debug(traceback.format_exc())\n\n if self._timeouts:\n now = _time()\n while self._timeouts and self._timeouts[0][0] <= now:\n fd_timeout, fd = self._timeouts.pop(0)\n if fd._timeout_id == fd_timeout:\n fd._timeout_id = None\n fd._timed_out()", "metadata": "root._AsyncPoller.poll", "header": "['class', '_AsyncPoller', '(', 'object', ')', ':', '___EOS___']", "index": 1712 }, { "content": " def terminate(self):\n self.cmd_wsock.close()\n self.cmd_rsock.close()\n if len(self._timeouts):\n logger.warning('pending timeouts: %s', len(self._timeouts))\n if hasattr(self._poller, 'terminate'):\n self._poller.terminate()\n for fd in self._fds.itervalues():\n try:\n self._poller.unregister(fd._fileno)\n except:\n logger.warning('unregister of %s failed with %s',\n fd._fileno, traceback.format_exc())\n fd._notifier = None\n self._poller = None\n self._timeouts = []\n self._fds = {}\n self.__class__.__instance = None", "metadata": "root._AsyncPoller.terminate", "header": "['class', '_AsyncPoller', '(', 'object', ')', ':', '___EOS___']", "index": 1774 }, { "content": " def hot_swap(self, target, *args, **kwargs):\n \"\"\"Replaces coro's generator function with given target(*args, **kwargs).\n\n The new generator starts executing from the beginning. If\n there are any pending messages, they will not be reset, so new\n generator can process them (or clear them with successive\n 'receive' calls with timeout=0 until it returns\n 'alarm_value').\n \"\"\"\n try:\n generator = Coro.__get_generator(self, target, *args, **kwargs)\n except:\n logger.warning('%s is not a generator!', target.__name__)\n return -1\n self._swap_generator = generator\n return Coro._asyncoro._swap_generator(self)", "metadata": "root.Coro.hot_swap", "header": "['class', 'Coro', '(', 'object', ')', ':', '___EOS___']", "index": 2516 }, { "content": " def __init__(self, name, transform=None):\n \"\"\"'name' must be unique across all channels.\n\n 'transform' is a function that can either filter or\n transform a message. If the function returns 'None', the\n message is filtered (ignored). The function is called with\n first parameter set to channel name and second parameter set\n to the message.\n \"\"\"\n\n if not Channel._asyncoro:\n Channel._asyncoro = AsynCoro.instance()\n self._name = name\n self._location = Channel._asyncoro._location\n if transform is not None:\n try:\n argspec = inspect.getargspec(transform)\n assert len(argspec.args) == 2\n except:\n logger.warning('invalid \"transform\" function ignored')\n transform = None\n self._transform = transform\n self._subscribers = set()\n self._subscribe_event = Event()\n Channel._asyncoro._lock.acquire()\n if name in Channel._asyncoro._channels:\n Channel._asyncoro._lock.release()\n logger.warning('duplicate channel \"%s\"!', name)\n else:\n Channel._asyncoro._channels[name] = self\n Channel._asyncoro._lock.release()", "metadata": "root.Channel.__init__", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2659 }, { "content": " def set_transform(self, transform):\n if self._location != Channel._asyncoro._location:\n return -1\n try:\n argspec = inspect.getargspec(transform)\n assert len(argspec.args) == 2\n except:\n logger.warning('invalid \"transform\" function ignored')\n return -1\n self._transform = transform\n return 0", "metadata": "root.Channel.set_transform", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2747 }, { "content": " def send(self, message):\n \"\"\"Message is sent to currently registered subscribers.\n\n Can also be used on remote channels.\n \"\"\"\n if self._location == Channel._asyncoro._location:\n if self._transform:\n try:\n message = self._transform(self._name, message)\n except:\n message = None\n if message is None:\n return 0\n invalid = []\n for subscriber in self._subscribers:\n if subscriber.send(message) != 0:\n invalid.append(subscriber)\n if invalid:\n def _unsub(self, subscriber, coro=None):\n logger.debug('remote subscriber %s is not valid; unsubscribing it', subscriber)\n yield self.unsubscribe(subscriber)\n for subscriber in invalid:\n Coro(_unsub, self, subscriber)\n else:\n # remote channel\n request = _NetRequest('send', kwargs={'channel': self._name, 'message': message},\n dst=self._location, timeout=5)\n # request is queued for asynchronous processing\n if _Peer.send_req(request) != 0:\n logger.warning('remote channel at %s may not be valid', self._location)\n return -1\n return 0", "metadata": "root.Channel.send", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2842 }, { "content": " def deliver(self, message, timeout=None, n=0):\n \"\"\"Must be used with 'yield' as 'rcvd = yield channel.deliver(message)'.\n\n Blocking 'send': Wait until message can be delivered to at\n least 'n' subscribers before timeout. Returns number of\n end-point recipients (coroutines) the message is delivered to;\n i.e., in case of heirarchical channels, it is the sum of\n recipients of all the channels.\n\n Can also be used on remote channels.\n \"\"\"\n if not isinstance(n, int) or n < 0:\n raise StopIteration(-1)\n if self._location == Channel._asyncoro._location:\n if self._transform:\n try:\n message = self._transform(self._name, message)\n except:\n message = None\n if message is None:\n raise StopIteration(0)\n if n:\n while len(self._subscribers) < n:\n start = _time()\n self._subscribe_event.clear()\n if (yield self._subscribe_event.wait(timeout)) is False:\n raise StopIteration(0)\n if timeout is not None:\n timeout -= _time() - start\n if timeout <= 0:\n raise StopIteration(0)\n # during delivery, _subscribers may change, so make copy\n subscribers = list(self._subscribers)\n info = {'reply': 0, 'pending': len(subscribers), 'success': 0,\n 'done': Event(), 'invalid': []}\n\n def _deliver(subscriber, info, timeout, n, coro=None):\n try:\n reply = yield subscriber.deliver(message, timeout=timeout)\n if reply > 0:\n info['reply'] += reply\n info['success'] += 1\n if n > 0 and info['success'] >= n:\n info['done'].set()\n elif reply < 0:\n info['invalid'].append(subscriber)\n except:\n pass\n info['pending'] -= 1\n if info['pending'] == 0:\n info['done'].set()\n for subscriber in subscribers:\n if isinstance(subscriber, Coro) and self._location == subscriber._location:\n if subscriber.send(message) == 0:\n info['reply'] += 1\n info['success'] += 1\n info['pending'] -= 1\n else:\n # channel/remote coro\n Coro(_deliver, subscriber, info, timeout, n)\n if info['pending'] == 0:\n info['done'].set()\n if n == 0 or info['success'] < n:\n yield info['done'].wait(timeout)\n\n if info['invalid']:\n def _unsub(self, subscriber, coro=None):\n logger.debug('remote subscriber %s is not valid; unsubscribing it', subscriber)\n yield self.unsubscribe(subscriber)\n for subscriber in info['invalid']:\n Coro(_unsub, self, subscriber)\n\n raise StopIteration(info['reply'])\n else:\n # remote channel\n request = _NetRequest('deliver', kwargs={'channel': self._name, 'message': message,\n 'n': n},\n dst=self._location, timeout=timeout)\n request.reply = -1\n reply = yield Channel._asyncoro._sync_reply(request, alarm_value=0)\n if reply is None:\n reply = -1\n # if reply < 0:\n # logger.warning('remote channel \"%s\" at %s may have gone away!',\n # self._name, self._location)\n raise StopIteration(reply)", "metadata": "root.Channel.deliver", "header": "['class', 'Channel', '(', 'object', ')', ':', '___EOS___']", "index": 2875 }, { "content": " def _schedule(self):\n \"\"\"Internal use only.\n \"\"\"\n while not self._quit:\n # process I/O events\n self._notifier.poll(0)\n self._lock.acquire()\n if not self._scheduled:\n if self._timeouts:\n timeout = self._timeouts[0][0] - _time()\n else:\n timeout = None\n self._polling = True\n self._lock.release()\n self._notifier.poll(timeout)\n self._lock.acquire()\n self._polling = False\n if self._timeouts:\n # wake up timed suspends; pollers may timeout slightly\n # earlier, so give a bit of slack\n now = _time() + 0.0001\n while self._timeouts and self._timeouts[0][0] <= now:\n timeout, cid, alarm_value = heappop(self._timeouts)\n assert timeout <= now\n coro = self._coros.get(cid, None)\n if not coro or coro._timeout != timeout:\n continue\n if coro._state not in (AsynCoro._AwaitIO_, AsynCoro._Suspended,\n AsynCoro._AwaitMsg_):\n logger.warning('coro %s/%s is in state %s for resume; ignored',\n coro._name, coro._id, coro._state)\n continue\n coro._timeout = None\n self._suspended.discard(cid)\n self._scheduled.add(cid)\n coro._state = AsynCoro._Scheduled\n coro._value = alarm_value\n scheduled = [self._coros[cid] for cid in self._scheduled]\n self._lock.release()\n\n for coro in scheduled:\n coro._state = AsynCoro._Running\n AsynCoro.__cur_coro = coro\n\n try:\n if coro._exceptions:\n exc = coro._exceptions.pop(0)\n if exc[0] == GeneratorExit:\n # assert str(exc[1]) == 'close'\n coro._generator.close()\n retval = coro._value\n else:\n retval = coro._generator.throw(*exc)\n else:\n retval = coro._generator.send(coro._value)\n except:\n self._lock.acquire()\n exc = sys.exc_info()\n if exc[0] == StopIteration:\n v = exc[1].args\n if v:\n if len(v) == 1:\n coro._value = v[0]\n else:\n coro._value = v\n coro._exceptions = []\n elif exc[0] == HotSwapException:\n v = exc[1].args\n if isinstance(v, tuple) and len(v) == 1 and inspect.isgenerator(v[0]) and \\\n coro._hot_swappable and not coro._callers:\n try:\n coro._generator.close()\n except:\n logger.warning('closing %s/%s raised exception: %s',\n coro._name, coro._id, traceback.format_exc())\n coro._generator = v[0]\n coro._name = coro._generator.__name__\n coro._exceptions = []\n coro._value = None\n # coro._msgs is not reset, so new\n # coroutine can process pending messages\n coro._state = AsynCoro._Scheduled\n else:\n logger.warning('invalid HotSwapException from %s/%s ignored',\n coro._name, coro._id)\n self._lock.release()\n continue\n else:\n coro._exceptions.append(exc)\n\n if coro._callers:\n # return to caller\n caller = coro._callers.pop(-1)\n coro._generator = caller[0]\n if coro._swap_generator and not coro._callers and coro._hot_swappable:\n coro._exceptions.append((HotSwapException,\n HotSwapException(coro._swap_generator)))\n coro._swap_generator = None\n coro._state = AsynCoro._Scheduled\n elif coro._exceptions:\n # exception in callee, restore saved value\n coro._value = caller[1]\n self._suspended.discard(coro._id)\n self._scheduled.add(coro._id)\n coro._state = AsynCoro._Scheduled\n elif coro._state == AsynCoro._Running:\n coro._state = AsynCoro._Scheduled\n else:\n if coro._exceptions:\n exc = coro._exceptions[0]\n assert isinstance(exc, tuple)\n if len(exc) == 2:\n exc = ''.join(traceback.format_exception_only(*exc))\n else:\n exc = ''.join(traceback.format_exception(*exc))\n logger.warning('uncaught exception in %s:\\n%s', coro, exc)\n try:\n coro._generator.close()\n except:\n logger.warning('closing %s raised exception: %s',\n coro._name, traceback.format_exc())\n # delete this coro\n if coro._state not in (AsynCoro._Scheduled, AsynCoro._Running):\n logger.warning('coro \"%s\" is in state: %s', coro._name, coro._state)\n monitors = list(coro._monitors)\n for monitor in monitors:\n if monitor._location == self._location:\n if coro._exceptions:\n exc = MonitorException(coro, coro._exceptions[0])\n else:\n exc = MonitorException(coro, (StopIteration, coro._value))\n if self._coros.get(monitor._id, None) == monitor:\n monitor.send(exc)\n else:\n logger.warning('monitor for %s/%s has gone away!',\n coro._name, coro._id)\n coro._monitors.discard(monitor)\n else:\n # remote monitor; prepare serializable data\n if coro._exceptions:\n exc = coro._exceptions[0][:2]\n try:\n serialize(exc[1])\n except pickle.PicklingError:\n # send only the type\n exc = (exc[0], type(exc[1].args[0]))\n exc = MonitorException(coro, exc)\n coro._exceptions = []\n else:\n exc = coro._value\n try:\n serialize(exc)\n except pickle.PicklingError:\n exc = type(exc)\n exc = MonitorException(coro, (StopIteration, exc))\n monitor.send(exc)\n if not coro._monitors or not coro._exceptions:\n coro._msgs.clear()\n coro._monitors.clear()\n coro._exceptions = []\n if self._coros.pop(coro._id, None) != coro:\n logger.warning('invalid coro: %s, %s', coro._id, coro._state)\n if coro._daemon is True:\n self._daemons -= 1\n elif coro._monitors:\n # a (local) monitor can restart it with hot_swap\n coro._hot_swappable = True\n coro._exceptions = []\n coro._state = None\n coro._generator = None\n if coro._complete:\n coro._complete.set()\n else:\n coro._complete = 0\n self._scheduled.discard(coro._id)\n if len(self._coros) == self._daemons:\n self._complete.set()\n self._lock.release()\n else:\n self._lock.acquire()\n if coro._state == AsynCoro._Running:\n coro._state = AsynCoro._Scheduled\n # if this coroutine is suspended, don't update\n # the value; when it is resumed, it will be\n # updated with the 'update' value\n coro._value = retval\n\n if isinstance(retval, types.GeneratorType):\n # push current generator onto stack and activate\n # new generator\n coro._callers.append((coro._generator, coro._value))\n coro._generator = retval\n coro._value = None\n self._lock.release()\n AsynCoro.__cur_coro = None\n\n self._lock.acquire()\n for coro in self._coros.itervalues():\n logger.debug('terminating Coro %s/%s%s', coro._name, coro._id,\n ' (daemon)' if coro._daemon else '')\n AsynCoro.__cur_coro = coro\n coro._state = AsynCoro._Running\n while coro._generator:\n try:\n coro._generator.close()\n except:\n logger.warning('closing %s raised exception: %s',\n coro._generator.__name__, traceback.format_exc())\n if coro._callers:\n coro._generator, coro._value = coro._callers.pop(-1)\n else:\n coro._generator = None\n if coro._complete:\n coro._complete.set()\n else:\n coro._complete = 0\n self._scheduled = set()\n self._suspended = set()\n self._timeouts = []\n self._coros = {}\n self._channels = {}\n self.__class__.__instance = None\n self._quit = True\n self._notifier.terminate()\n self._lock.release()\n logger.debug('AsynCoro %sterminated', ('%s ' % self._location) if self._location else '')\n while self._atexit:\n func, fargs, fkwargs = self._atexit.pop()\n try:\n func(*fargs, **fkwargs)\n except:\n logger.warning('running %s failed:', func.__name__)\n logger.warning(traceback.format_exc())\n self._complete.set()\n logger.shutdown()\n time.sleep(0.1)", "metadata": "root.AsynCoro._schedule", "header": "['class', 'AsynCoro', '(', 'object', ')', ':', '___EOS___']", "index": 3354 }, { "content": " def _tasklet(self):\n while 1:\n item = self._task_queue.get(block=True)\n if item is None:\n self._task_queue.task_done()\n break\n coro, target, args, kwargs = item\n try:\n val = target(*args, **kwargs)\n coro._proceed_(val)\n except:\n coro.throw(*sys.exc_info())\n finally:\n self._task_queue.task_done()", "metadata": "root.AsyncThreadPool._tasklet", "header": "['class', 'AsyncThreadPool', '(', 'object', ')', ':', '___EOS___']", "index": 3685 } ]

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Unused import

IEEERobotics/bot/bot/hardware/complex_hardware/ArmCommandLine.py

[ { "content": "import os \nimport sys \nfrom time import sleep \nimport bot.lib.lib as lib \nfrom robot_arm import RobotArm \nfrom QRCode2 import QRCode2\n\nbot_config = lib.get_config()\narm_config = bot_config[\"dagu_arm\"]\narm = RobotArm(arm_config)\n\n\nwhile True:\n print \"Commands: \" \n print \"1: Set Angles\"\n print \"2: Move to hopper pos\"\n print \"3: Set Hopper\" \n print \"4: Empty hopper\" \n print \"5: Calibrate rail\"\n print \"6: Pinch \"\n print \"7: Let go \"\n print \"8: Reset the arm and rail\"\n print \"9: Check color in bin\"\n print \"10: Tier Grab \"\n print \"11: Turn Light On \"\n print \"12: Turn Light Off \"\n print \"13: Grab QR \"\n print \"14: Grab Color \" \n print \"15: Find block with IR\"\n print \"16: Check Hopper Colors\"\n \n\n Command = input(\"Command: \")\n if Command == 16:\n arm.check_hopper()\n \n if Command == 15:\n arm.FindBlockWithIR() \n \n if Command == 13: \n arm.GrabQR()\n \n if Command == 14:\n arm.GrabColor() \n \n if Command == 12:\n arm.TurnOffLight()\n \n if Command == 11:\n \n arm.TurnOnLight()\n \n if Command == 10:\n arm.competition_solver_barge('B') \n \n if Command == -1: \n print \"Good Bye!\"\n break\n \n if Command == 1:\n arm.demo_set_angles()\n \n if Command == 2:\n Pos = input(\"which bin to go to: \")\n arm.rail.Orientor(Pos)\n \n if Command == 3:\n i = 0\n while i < 4:\n Color = raw_input(\"Block color: \") \n qr = QRCode2(0,Color,0)\n arm.hopper[i]=qr \n i=i+1 \n \n if Command == 4:\n Color = raw_input(\"Which color: \")\n arm.reset_home_position() \n arm.FindAndGetBlock(Color)\n \n if Command == 5:\n arm.rail.CalibrateRail() \n \n if Command == 6: \n arm.grab()\n \n if Command == 7:\n arm.release()\n \n if Command == 8:\n arm.reset_home_position()\n \n if Command == 9: \n \n arm.check_hopper()\n print arm.hopper \n \n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

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[]

1

false

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Except block handles 'BaseException'

mikemaccana/imeveryone/usermessages.py

[ { "content": " def makepreviewpic(self,imagefile,imageconfig):\n '''Reduce images larger than a certain size'''\n myimage = Image.open(imagefile)\n width,height = myimage.size\n aspect = float(width) / float(height)\n maxwidth = imageconfig.as_int('maxwidth')\n maxheight = imageconfig.as_int('maxheight')\n maxsize = (maxwidth,maxheight)\n # Don't bother if image is already smaller\n if width < maxwidth and height < maxheight:\n logging.info('Small image, using existing pic at: '+imagefile)\n self.preview = imagefile\n # Resize, save, return preview file name\n else:\n myimage.thumbnail(maxsize,Image.ANTIALIAS)\n newfilename = imagefile.replace('cache','thumbs').split('.')[-2]+'_preview.'+imagefile.split('.')[-1]\n try:\n myimage.save(newfilename)\n logging.info('Saved preview pic to: '+newfilename)\n self.preview = newfilename\n except:\n pass\n return", "metadata": "root.Message.makepreviewpic", "header": "['class', 'Message', '(', 'object', ')', ':', '___EOS___']", "index": 255 }, { "content": " def checklinksandembeds(self,config):\n '''Process any links in the text'''\n maxwidth = config['images'].as_int('maxwidth')\n maxheight = config['images'].as_int('maxheight')\n linkre = re.compile(r\"(http://[^ ]+)\")\n for link in linkre.findall(self.posttext):\n # lopp through links gettng embeds\n logging.info('Getting embed data for link: '+link)\n try:\n self.embedcode = getembedcode(link, maxwidth=maxwidth, maxheight=maxheight)\n if self.embedcode:\n logging.info('Embed data found!')\n else:\n logging.info('Embed data not found!') \n except:\n logging.warn('Getting embed data for link failed - most likely embedly 404')\n pass\n self.original = self.posttext\n self.posttext = linkre.sub('', self.posttext)\n return", "metadata": "root.Message.checklinksandembeds", "header": "['class', 'Message', '(', 'object', ')', ':', '___EOS___']", "index": 331 }, { "content": " def checkporn(self,config):\n '''Check images for porn'''\n def savegrayscale(imagefile):\n '''Convert image to greyscale and save'''\n adultimage = Image.open(imagefile)\n adultimage = ImageOps.grayscale(adultimage)\n adultimage.save(imagefile)\n return\n if self.localfile and config['images'].as_bool('enabled') and config['images'].as_bool('adult'):\n count = 1\n response = {}\n while count < 3:\n try:\n logging.info('Checking for porn, try '+str(count))\n response = pifilter.checkimage(\n self.localfile,\n config['posting']['pifilter']['customerid'],\n aggressive = config['posting']['pifilter'].as_bool('aggressive')\n )\n break\n except:\n logging.error('Could not open pifilter URL')\n time.sleep(5)\n count = count+1\n if 'result' in response:\n if response['result']:\n logging.warn('message submission '+str(self._id)+' with image '+self.localfile+' is porn.')\n # Make a greyscale version and use that instead\n if config['images']['adultaction'] in ['gray','grey']:\n savegrayscale(self.localfile)\n logging.info('Saving greyscale version...')\n else:\n self.useralerts.append(config['alerts']['porn'])\n else:\n logging.info('image is clean')\n else:\n # No response from pifilter\n pass\n return", "metadata": "root.Message.checkporn", "header": "['class', 'Message', '(', 'object', ')', ':', '___EOS___']", "index": 352 } ]

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[]

1

true

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Unused import

Nordeus/pushkin/pushkin/tests/test_server_json.py

[ { "content": "import pytest\nfrom pushkin import pushkin_cli\nimport tornado.web\nfrom pushkin import context\nfrom pushkin.database import database\nfrom pushkin.request.request_processor import RequestProcessor\nfrom pushkin.requesthandlers.events import JsonEventHandler\nfrom pushkin.requesthandlers.notifications import JsonNotificationHandler\nfrom pushkin import test_config_ini_path\nfrom pushkin import config\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "@pytest.fixture\ndef setup_database():\n database.create_database()", "metadata": "root.setup_database", "header": "['module', '___EOS___']", "index": 12 }, { "content": "@pytest.fixture\ndef mock_processor(mocker):\n '''Mock request processor'''\n mocker.patch('pushkin.request.request_processor.RequestProcessor.submit')\n mocker.patch('pushkin.context.main_logger')", "metadata": "root.mock_processor", "header": "['module', '___EOS___']", "index": 17 }, { "content": "@pytest.fixture\ndef app():\n pushkin_cli.CONFIGURATION_FILENAME = test_config_ini_path\n pushkin_cli.init()\n return pushkin_cli.create_app()", "metadata": "root.app", "header": "['module', '___EOS___']", "index": 24 }, { "content": "@pytest.fixture\ndef notification_batch_json():\n ''' Return a valid json request '''\n return '''\n {\n \"notifications\": [\n {\n \"login_id\" : 1338,\n \"title\" : \"Msg title\",\n \"content\" : \"Text of a message\",\n \"screen\" : \"some_screen_id\"\n }\n ]\n }\n '''", "metadata": "root.notification_batch_json", "header": "['module', '___EOS___']", "index": 30 }, { "content": "@pytest.fixture\ndef post_notification_url(base_url):\n return base_url + config.json_notification_handler_url", "metadata": "root.post_notification_url", "header": "['module', '___EOS___']", "index": 46 }, { "content": "@pytest.fixture\ndef event_batch_json():\n ''' Return a valid json request '''\n return '''\n {\n \"events\": [\n {\n \"user_id\" : 123,\n \"event_id\" : 1,\n \"timestamp\" : 12345,\n \"pairs\": {\n \"some_constant\" : \"6\",\n \"world_id\" : \"1\"\n }\n }\n ]\n }\n '''", "metadata": "root.event_batch_json", "header": "['module', '___EOS___']", "index": 50 }, { "content": "@pytest.fixture\ndef post_event_url(base_url):\n return base_url + config.json_event_handler_url", "metadata": "root.post_event_url", "header": "['module', '___EOS___']", "index": 70 }, { "content": "@pytest.mark.gen_test\[email protected](\"input\", [\n (''),\n ('asd'),\n])\ndef test_post_notification_empty_request(setup_database, mock_processor, http_client, post_notification_url, input):\n '''Test that server responds with 400 if invalid parameter is supplied to post_notification request'''\n request = tornado.httpclient.HTTPRequest(post_notification_url, method='POST', body=input)\n with pytest.raises(tornado.httpclient.HTTPError):\n yield http_client.fetch(request)\n assert not context.request_processor.submit.called", "metadata": "root.test_post_notification_empty_request", "header": "['module', '___EOS___']", "index": 75 }, { "content": "@pytest.mark.gen_test\ndef test_post_notification(setup_database, mock_processor, http_client, post_notification_url,\n notification_batch_json):\n '''Test that a valid request is succesfully parsed in post_notification'''\n request = tornado.httpclient.HTTPRequest(post_notification_url, method='POST', body=notification_batch_json)\n response = yield http_client.fetch(request)\n assert response.code == 200\n assert context.request_processor.submit.called", "metadata": "root.test_post_notification", "header": "['module', '___EOS___']", "index": 88 }, { "content": "@pytest.mark.gen_test\[email protected](\"input\", [\n (''),\n ('asd'),\n])\ndef test_post_event_empty_request(setup_database, mock_processor, http_client, post_event_url, input):\n '''Test that server responds with 400 if invalid parameter is supplied to post_event request'''\n request = tornado.httpclient.HTTPRequest(post_event_url, method='POST', body=input)\n with pytest.raises(tornado.httpclient.HTTPError):\n yield http_client.fetch(request)\n assert not context.request_processor.submit.called", "metadata": "root.test_post_event_empty_request", "header": "['module', '___EOS___']", "index": 98 }, { "content": "@pytest.mark.gen_test\ndef test_post_event(setup_database, mock_processor, http_client, post_event_url, event_batch_json):\n '''Test that a valid request is succesfully parsed in post_event'''\n context.request_processor.submit.return_value = True\n request = tornado.httpclient.HTTPRequest(post_event_url, method='POST', body=event_batch_json)\n response = yield http_client.fetch(request)\n assert response.code == 200\n assert context.request_processor.submit.called", "metadata": "root.test_post_event", "header": "['module', '___EOS___']", "index": 111 }, { "content": "@pytest.mark.gen_test\ndef test_post_event_service_unavailable(setup_database, mock_processor, http_client, post_event_url, event_batch_json,\n app):\n '''Test that service_unavailable is returned if server load is more that expected'''\n context.request_processor.submit.return_value = False\n request = tornado.httpclient.HTTPRequest(post_event_url, method='POST', body=event_batch_json)\n RequestProcessor.submit.return_value = False\n with pytest.raises(tornado.httpclient.HTTPError):\n yield http_client.fetch(request)", "metadata": "root.test_post_event_service_unavailable", "header": "['module', '___EOS___']", "index": 121 } ]

[ { "span": "from pushkin.requesthandlers.events import JsonEventHandler", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 59 }, { "span": "from pushkin.requesthandlers.notifications import JsonNotificationHandler", "start_line": 7, "start_column": 0, "end_line": 7, "end_column": 73 } ]

[]

1

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Unused import

caktus/django-comps/docs/conf.py

[ { "content": "# -*- coding: utf-8 -*-\n#\n# django-comps documentation build configuration file, created by\n# sphinx-quickstart on Wed Jul 25 21:12:10 2012.\n#\n# This file is execfile()d with the current directory set to its containing dir.\n#\n# Note that not all possible configuration values are present in this\n# autogenerated file.\n#\n# All configuration values have a default; values that are commented out\n# serve to show the default.\n\nimport sys, os\n\n# If extensions (or modules to document with autodoc) are in another directory,\n# add these directories to sys.path here. If the directory is relative to the\n# documentation root, use os.path.abspath to make it absolute, like shown here.\n#sys.path.insert(0, os.path.abspath('.'))\n\n# -- General configuration -----------------------------------------------------\n\n# If your documentation needs a minimal Sphinx version, state it here.\n#needs_sphinx = '1.0'\n\n# Add any Sphinx extension module names here, as strings. They can be extensions\n# coming with Sphinx (named 'sphinx.ext.*') or your custom ones.\nextensions = []\n\n# Add any paths that contain templates here, relative to this directory.\ntemplates_path = ['_templates']\n\n# The suffix of source filenames.\nsource_suffix = '.rst'\n\n# The encoding of source files.\n#source_encoding = 'utf-8-sig'\n\n# The master toctree document.\nmaster_doc = 'index'\n\n# General information about the project.\nproject = u'django-comps'\ncopyright = u'2012, David Ray'\n\n# The version info for the project you're documenting, acts as replacement for\n# |version| and |release|, also used in various other places throughout the\n# built documents.\n#\n# The short X.Y version.\nversion = '0.3'\n# The full version, including alpha/beta/rc tags.\nrelease = '0.3.0'\n\n# The language for content autogenerated by Sphinx. Refer to documentation\n# for a list of supported languages.\n#language = None\n\n# There are two options for replacing |today|: either, you set today to some\n# non-false value, then it is used:\n#today = ''\n# Else, today_fmt is used as the format for a strftime call.\n#today_fmt = '%B %d, %Y'\n\n# List of patterns, relative to source directory, that match files and\n# directories to ignore when looking for source files.\nexclude_patterns = ['_build']\n\n# The reST default role (used for this markup: `text`) to use for all documents.\n#default_role = None\n\n# If true, '()' will be appended to :func: etc. cross-reference text.\n#add_function_parentheses = True\n\n# If true, the current module name will be prepended to all description\n# unit titles (such as .. function::).\n#add_module_names = True\n\n# If true, sectionauthor and moduleauthor directives will be shown in the\n# output. They are ignored by default.\n#show_authors = False\n\n# The name of the Pygments (syntax highlighting) style to use.\npygments_style = 'sphinx'\n\n# A list of ignored prefixes for module index sorting.\n#modindex_common_prefix = []\n\n\n# -- Options for HTML output ---------------------------------------------------\n\n# The theme to use for HTML and HTML Help pages. See the documentation for\n# a list of builtin themes.\nhtml_theme = 'default'\n\n# Theme options are theme-specific and customize the look and feel of a theme\n# further. For a list of options available for each theme, see the\n# documentation.\n#html_theme_options = {}\n\n# Add any paths that contain custom themes here, relative to this directory.\n#html_theme_path = []\n\n# The name for this set of Sphinx documents. If None, it defaults to\n# \"<project> v<release> documentation\".\n#html_title = None\n\n# A shorter title for the navigation bar. Default is the same as html_title.\n#html_short_title = None\n\n# The name of an image file (relative to this directory) to place at the top\n# of the sidebar.\n#html_logo = None\n\n# The name of an image file (within the static path) to use as favicon of the\n# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32\n# pixels large.\n#html_favicon = None\n\n# Add any paths that contain custom static files (such as style sheets) here,\n# relative to this directory. They are copied after the builtin static files,\n# so a file named \"default.css\" will overwrite the builtin \"default.css\".\nhtml_static_path = ['_static']\n\n# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,\n# using the given strftime format.\n#html_last_updated_fmt = '%b %d, %Y'\n\n# If true, SmartyPants will be used to convert quotes and dashes to\n# typographically correct entities.\n#html_use_smartypants = True\n\n# Custom sidebar templates, maps document names to template names.\n#html_sidebars = {}\n\n# Additional templates that should be rendered to pages, maps page names to\n# template names.\n#html_additional_pages = {}\n\n# If false, no module index is generated.\n#html_domain_indices = True\n\n# If false, no index is generated.\n#html_use_index = True\n\n# If true, the index is split into individual pages for each letter.\n#html_split_index = False\n\n# If true, links to the reST sources are added to the pages.\n#html_show_sourcelink = True\n\n# If true, \"Created using Sphinx\" is shown in the HTML footer. Default is True.\n#html_show_sphinx = True\n\n# If true, \"(C) Copyright ...\" is shown in the HTML footer. Default is True.\n#html_show_copyright = True\n\n# If true, an OpenSearch description file will be output, and all pages will\n# contain a <link> tag referring to it. The value of this option must be the\n# base URL from which the finished HTML is served.\n#html_use_opensearch = ''\n\n# This is the file name suffix for HTML files (e.g. \".xhtml\").\n#html_file_suffix = None\n\n# Output file base name for HTML help builder.\nhtmlhelp_basename = 'django-compsdoc'\n\n\n# -- Options for LaTeX output --------------------------------------------------\n\nlatex_elements = {\n# The paper size ('letterpaper' or 'a4paper').\n#'papersize': 'letterpaper',\n\n# The font size ('10pt', '11pt' or '12pt').\n#'pointsize': '10pt',\n\n# Additional stuff for the LaTeX preamble.\n#'preamble': '',\n}\n\n# Grouping the document tree into LaTeX files. List of tuples\n# (source start file, target name, title, author, documentclass [howto/manual]).\nlatex_documents = [\n ('index', 'django-comps.tex', u'django-comps Documentation',\n u'David Ray', 'manual'),\n]\n\n# The name of an image file (relative to this directory) to place at the top of\n# the title page.\n#latex_logo = None\n\n# For \"manual\" documents, if this is true, then toplevel headings are parts,\n# not chapters.\n#latex_use_parts = False\n\n# If true, show page references after internal links.\n#latex_show_pagerefs = False\n\n# If true, show URL addresses after external links.\n#latex_show_urls = False\n\n# Documents to append as an appendix to all manuals.\n#latex_appendices = []\n\n# If false, no module index is generated.\n#latex_domain_indices = True\n\n\n# -- Options for manual page output --------------------------------------------\n\n# One entry per manual page. List of tuples\n# (source start file, name, description, authors, manual section).\nman_pages = [\n ('index', 'django-comps', u'django-comps Documentation',\n [u'David Ray'], 1)\n]\n\n# If true, show URL addresses after external links.\n#man_show_urls = False\n\n\n# -- Options for Texinfo output ------------------------------------------------\n\n# Grouping the document tree into Texinfo files. List of tuples\n# (source start file, target name, title, author,\n# dir menu entry, description, category)\ntexinfo_documents = [\n ('index', 'django-comps', u'django-comps Documentation',\n u'David Ray', 'django-comps', 'A rapid prototyping facilitator.',\n 'Miscellaneous'),\n]\n\n# Documents to append as an appendix to all manuals.\n#texinfo_appendices = []\n\n# If false, no module index is generated.\n#texinfo_domain_indices = True\n\n# How to display URL addresses: 'footnote', 'no', or 'inline'.\n#texinfo_show_urls = 'footnote'\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import sys, os", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 14 } ]

[]

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Insecure temporary file

binhex/moviegrabber/lib/site-packages/Cheetah/FileUtils.py

[ { "content": " def __init__(self, files, patternOrRE, replacement,\n recordResults=True):\n\n \n if isinstance(patternOrRE, basestring):\n self._regex = re.compile(patternOrRE)\n else:\n self._regex = patternOrRE\n if isinstance(replacement, basestring):\n self._subber = _GenSubberFunc(replacement).subberFunc()\n else:\n self._subber = replacement\n\n self._pattern = pattern = self._regex.pattern\n self._files = files\n self._results = {}\n self._recordResults = recordResults\n\n ## see if we should use pgrep to do the file matching\n self._usePgrep = False\n if (os.popen3('pgrep')[2].read()).startswith('Usage:'):\n ## now check to make sure pgrep understands the pattern\n tmpFile = mktemp()\n open(tmpFile, 'w').write('#')\n if not (os.popen3('pgrep \"' + pattern + '\" ' + tmpFile)[2].read()):\n # it didn't print an error msg so we're ok\n self._usePgrep = True\n os.remove(tmpFile)\n\n self._run()", "metadata": "root.FindAndReplace.__init__", "header": "['class', 'FindAndReplace', ':', '___EOS___']", "index": 220 } ]

[ { "span": "mktemp()", "start_line": 242, "start_column": 22, "end_line": 242, "end_column": 30 } ]

[]

1

true

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Variable defined multiple times

CollabQ/CollabQ/settings.py

[ { "content": "# Copyright 2009 Google Inc.\n# Copyright 2010 http://www.collabq.com\n\n# Licensed under the Apache License, Version 2.0 (the \"License\");\n# you may not use this file except in compliance with the License.\n# You may obtain a copy of the License at\n#\n# http://www.apache.org/licenses/LICENSE-2.0\n#\n# Unless required by applicable law or agreed to in writing, software\n# distributed under the License is distributed on an \"AS IS\" BASIS,\n# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.\n# See the License for the specific language governing permissions and\n# limitations under the License.\n\nimport re\nimport os\nimport os.path\nimport sys\n\n# for python 2.6\nif sys.version.startswith('2.6'):\n import logging\n logging.logMultiprocessing = 0\n\n\nROOT_PATH = os.path.dirname(__file__)\n\n###\n# Django related settings\n###\n\nDEBUG = False\nTEMPLATE_DEBUG = DEBUG\n\nADMINS = (\n ('Jose Maria Zambrana Arze', '[email protected]'),\n)\n\nMANAGERS = ADMINS\n\n#POBoxPress owner Settings\n# TODO(zero): review this\nADMINS_POBOX = []\nCREATE_CHANNELS_FROM_POSTS = False\n\n# This stuff is always going to be the same for an App Engine instance\nDATABASE_ENGINE = 'appengine' # 'appengine' is the only supported engine\nDATABASE_NAME = '' # Not used with appengine\nDATABASE_USER = '' # Not used with appengine\nDATABASE_PASSWORD = '' # Not used with appengine\nDATABASE_HOST = '' # Not used with appengine\nDATABASE_PORT = '' # Not used with appengine\n\n# The appengine_django code doesn't care about the address of memcached\n# because it is a built in API for App Engine\nCACHE_BACKEND = 'memcached://'\n\n# Local time zone for this installation. Choices can be found here:\n# http://en.wikipedia.org/wiki/List_of_tz_zones_by_name\n# although not all choices may be available on all operating systems.\n# If running in a Windows environment this must be set to the same as your\n# system time zone.\nTIME_ZONE = 'UTC-8'\n\n# Language code for this installation. All choices can be found here:\n# http://www.i18nguy.com/unicode/language-identifiers.html\nLANGUAGE_CODE = 'en-us'\n\n# If you set this to False, Django will make some optimizations so as not\n# to load the internationalization machinery.\nUSE_I18N = True\n\n# Make this unique, and don't share it with anybody.\nSECRET_KEY = '8066e3870fb8eacf192789c415a0a3e8'\n\n# List of callables that know how to import templates from various sources.\nTEMPLATE_LOADERS = (\n 'django.template.loaders.filesystem.load_template_source',\n 'django.template.loaders.app_directories.load_template_source',\n # 'django.template.loaders.eggs.load_template_source',\n)\n\nMIDDLEWARE_CLASSES = (\n 'middleware.domain.DomainMiddleware',\n 'middleware.auth.AuthenticationMiddleware',\n 'middleware.exception.ExceptionMiddleware',\n 'middleware.verify.VerifyInstallMiddleware',\n 'middleware.cache.CacheMiddleware',\n 'middleware.strip_whitespace.WhitespaceMiddleware',\n 'middleware.profile.ProfileMiddleware',\n)\n\nROOT_URLCONF = 'urls'\n\n# The default theme to use\nDEFAULT_THEME = 'innogems'\nTHEME_TEMPLATES = os.path.join(os.path.join(ROOT_PATH, 'templates'), DEFAULT_THEME)\n\n# Where the templates live, you probably don't want to change this unless you\n# know what you're doing\nTEMPLATE_DIRS = (\n THEME_TEMPLATES,\n ROOT_PATH,\n)\n\n\nTEMPLATE_CONTEXT_PROCESSORS = (\n 'django.core.context_processors.debug',\n 'django.core.context_processors.request',\n 'common.context_processors.settings',\n 'common.context_processors.flash',\n 'common.context_processors.components',\n)\n\n# Only apps under INSTALLED_APPS will be automatically tested via \n# `python manage.py test` and the profiling code takes this list into\n# account while filtering calls\nINSTALLED_APPS = (\n 'appengine_django',\n 'common',\n 'actor',\n 'api',\n 'channel',\n 'explore',\n 'join',\n 'flat',\n 'login',\n 'front',\n 'invite',\n 'confirm',\n 'components',\n)\n\n# We override the default test runner so that we can be Totally Awesome\nTEST_RUNNER = 'common.test.runner.run_tests'\n\n\n####\n#\n# Below this is custom for CollabQ (not related to Django)\n#\n####\n\n\n# This is a dynamic setting so that we can check whether we have been run\n# locally, it is used mainly for making special testing-only tweaks. Ideally\n# we wouldn't need this, but the alternatives so far have been tricky.\nMANAGE_PY = os.path.exists('manage.py')\n\n# This is the colloquial name for an entry, mostly used for branding purposes\nPOST_NAME = 'xpress'\n\n\n\n# This is the domain where this is installed on App Engine. It will be\n# necessary to know this if you plan on enabling SSL for login and join.\nAPP_ID = 'collabq'\nGAE_DOMAIN = '%s.appspot.com' % APP_ID\nNS_DOMAIN = GAE_DOMAIN\n\n# Enabling this means we expect to be spending most of our time on a \n# Hosted domain\nHOSTED_DOMAIN_ENABLED = False\n\n# This is the domain you intend to serve your site from, when using hosted\n# domains. If SSL is enabled for login and join those requests will still \n# go to the GAE_DOMAIN above.\nHOSTED_DOMAIN = 'example.com'\n\n# App Engine requires you to serve with a subdomain\nDEFAULT_HOSTED_SUBDOMAIN = 'www'\n\n# DOMAIN will be used wherever a url to this site needs to be created\n# NS_DOMAIN will be used as the domain part of actor identifiers. \n# Note that changing this once you have deployed the site will likely result \n# in catastrophic failure.\nif HOSTED_DOMAIN_ENABLED:\n #DOMAIN = '%s.%s' % (DEFAULT_HOSTED_SUBDOMAIN, HOSTED_DOMAIN)\n DOMAIN = '%s.%s' % (DEFAULT_HOSTED_SUBDOMAIN, HOSTED_DOMAIN)\nelse:\n DOMAIN = GAE_DOMAIN\n\n\n\n\n# Subdomains aren't supported all that nicely by App Engine yet, so you\n# probably won't be able to enable WILDCARD_SUBDOMAINS below, but you can \n# still set up your app to use some of the static subdomains below.\n# Subdomains are ignored unless HOSTED_DOMAIN_ENABLED is True.\nSUBDOMAINS_ENABLED = False\nWILDCARD_USER_SUBDOMAINS_ENABLED = False\n\n# These are defined as { subdomain : url_conf, ...}\nINSTALLED_SUBDOMAINS = {\n 'api': 'api.urls', # api-only urlconf\n 'm': 'urls', # default urlconf, but allow the subdomain\n }\n\n# Enable SSL support for login and join, if using HOSTED_DOMAIN_ENABLED\n# this means you will be redirecting through https://GAE_DOMAIN/login\n# and https://GAE_DOMAIN/join for those respective actions.\nSSL_LOGIN_ENABLED = False\n\n#\n# Appearance / Theme\n#\n\n#\n# Cookie\n#\n\n# Cookie settings, pretty self explanatory, you shouldn't need to touch these.\nUSER_COOKIE = 'user'\nPASSWORD_COOKIE = 'password'\nCOOKIE_DOMAIN = '.%s' % DOMAIN\nCOOKIE_PATH = '/'\n\n#\n# Blog\n#\n\n# Do you want /blog to redirect to your blog?\nBLOG_ENABLED = False\n\n# Where is your blog?\nBLOG_URL = 'http://example.com'\nBLOG_FEED_URL = 'http://example.com/feeds'\n\n\n#\n# API\n#\n\n# Setting this to True will make the public API accept all requests as being \n# from ROOT with no regard to actual authentication.\n# Never this set to True on a production site.\nAPI_DISABLE_VERIFICATION = False\n\n# These next three determine which OAuth Signature Methods to allow.\nAPI_ALLOW_RSA_SHA1 = True\nAPI_ALLOW_HMAC_SHA1 = True\nAPI_ALLOW_PLAINTEXT = False\n\n# These three determine whether the ROOT use should be allowed to use these\n# methods, if any at all. Setting all of these to False will disable the \n# ROOT user from accessing the public API\nAPI_ALLOW_ROOT_RSA_SHA1 = True\nAPI_ALLOW_ROOT_HMAC_SHA1 = True\nAPI_ALLOW_ROOT_PLAINTEXT = False\n\n# OAuth consumer key and secret values\nROOT_TOKEN_KEY = 'ROOT_TOKEN_KEY'\nROOT_TOKEN_SECRET = 'ROOT_TOKEN_SECRET'\nROOT_CONSUMER_KEY = 'ROOT_CONSUMER_KEY'\nROOT_CONSUMER_SECRET = 'ROOT_CONSUMER_SECRET'\n\n# Allow support for legacy API authentication\nAPI_ALLOW_LEGACY_AUTH = False\nLEGACY_SECRET_KEY = 'I AM ALSO SECRET'\n\n#\n# SMS\n#\n\n# Enabling SMS will require a bit more than just making this True.\nSMS_ENABLED = False\n\n# Most SMS vendors will provide a service that will post messages to a url\n# on your site when an SMS has been received on their end, this setting allows\n# you to add a secret value to that must exist in that url to prevent \n# malicious use.\nSMS_VENDOR_SECRET = 'SMS_VENDOR'\n\n# Valid numbers on which you expect to receive SMS\nSMS_TARGET = '00000'\n\n# Whitelist regular expression for allowable mobile-terminated targets\nSMS_MT_WHITELIST = re.compile('\\+\\d+')\n\n# Blacklist regular expression for blocked mobile-terminated targets\nSMS_MT_BLACKLIST = None\n\n# Turn on test mode for SMS\nSMS_TEST_ONLY = False\n\n# Numbers to use when testing live SMS so you don't spam all your users\nSMS_TEST_NUMBERS = []\n\n\n#\n# XMPP / IM\n#\n\n# Enabling IM will require a bit more than just making this True.\nIM_ENABLED = False\n\n# This is the id (JID) of the IM bot that you will use to communicate with\n# users of the IM interface\nIM_BOT = '[email protected]'\n\n# Turn on test mode for IM\nIM_TEST_ONLY = False\n\n# JIDs to allow when testing live XMPP so you don't spam all your users\nIM_TEST_JIDS = []\n\n# Enable to send plain text messages only. Default is to send both plain\n# text and html.\nIM_PLAIN_TEXT_ONLY = False\n\n# Truncate entry title in comments. None or 140+ means no truncation.\nIM_MAX_LENGTH_OF_ENTRY_TITLES_FOR_COMMENTS = 40\n\n#\n# Task Queue\n#\n\n# Enabling the queue will allow you to process posts with larger numbers\n# of followers but will require you to set up a cron job that will continuously\n# ping a special url to make sure the queue gets processed\nQUEUE_ENABLED = True\n\n# The secret to use for your cron job that processes your queue\nQUEUE_VENDOR_SECRET = 'SECRET'\n\n\n#\n# Throttling Config\n#\n\n# This will control the max number of SMS to send over a 30-day period\nTHROTTLE_SMS_GLOBAL_MONTH = 10000\n\n\n\n\n# Settings for remote services\nIMAGE_UPLOAD_ENABLED = False\nIMAGE_UPLOAD_URL = 'upload.example.com'\n\nMAX_AVATAR_UPLOAD_KB = 300\n\n# Settings for Google Contacts import\nGOOGLE_CONTACTS_IMPORT_ENABLED = False\n\n\n\nFEEDS_ENABLED = False\nMARK_AS_SPAM_ENABLED = True\nPRESS_ENABLED = False\nBADGES_ENABLED = True\nHIDE_COMMENTS_ENABLED = True\nMULTIADMIN_ENABLED = True\nPRIVATE_CHANNELS_ENABLED = False\nMARKDOWN_ENABLED = False\n# Lists nicks of users participating in conversations underneath comment\n# areas for posts. Clicking list items inserts @nicks into comment box.\n# The list shows a maximum of 25 nicks.\nCOMMENT_QUICKLINKS_ENABLED = True\n# If enabled, adds support for using access keys 1-9 to insert @nicks into\n# comment box. Requires COMMENT_QUICKLINKS_ENABLED.\nCOMMENT_QUICKLINKS_ACCESSKEYS_ENABLED = False\n\nPROFILE_DB = False\n\n# Limit of avatar photo size in kilobytes\nMAX_AVATAR_PHOTO_KB = 200\n\nMAX_ACTIVATIONS = 10\n\n# Email Test mode\nEMAIL_TEST_ONLY = False\n\n# Allowed email addresses for testing\nEMAIL_TEST_ADDRESSES = []\n\n# Email limiting, if this is set it will restrict users to those with \n# email addresses in this domain\nEMAIL_LIMIT_DOMAIN = None\n\n\n\n# Gdata Stuff\nGDATA_CONSUMER_KEY = ''\nGDATA_CONSUMER_SECRET = ''\n\n\nDEFAULT_FROM_EMAIL = '[email protected]'\nDEFAULT_UNITTEST_TO_EMAIL = '[email protected]'\n\nPROFILING_DATA_PATH = 'profiling/prof_db.csv'\n\nDEFAULT_MEMBERS = []\n\nDEFAULT_TAXONOMY = 'tag_geo'\nDEFAULT_TAG = \"/%s\" % DEFAULT_TAXONOMY\nROOT_TAG = \"/%s\" % DEFAULT_TAXONOMY\n\n# Set up the settings for the dev server if we are running it\nif MANAGE_PY:\n try:\n from dev_settings import *\n except ImportError:\n pass\n\n# Allow local overrides, useful for testing during development\ntry:\n from local_settings import *\nexcept ImportError:\n pass\n\n\n# This is the name of the root user of the site\nROOT_NICK = 'root@%s' % NS_DOMAIN\n\n# This is the name of the site that will be used whenever it refers to itself\nSITE_NAME = \"CollabQ\"\nTAGLINE = \"Open Souce | Enterprise | Social Software\"\nSITE_DESCRIPTION = \"CollabQ community management system\"\nDEFAULT_CHANNEL = 'support'\nPOST_NAME = 'Post'\n# This is the colloquial name for an entry, mostly used for branding purposes\n\nCHANNEL_TYPES = ['Professional', 'Academic', 'Social']\nENABLE_CHANNELS = False\nENABLE_CHANNEL_TYPES = False\nENABLE_ACCOUNT_TYPE = False\n\n# Twitter\nTWITTER_CONSUMER_KEY = ''\nTWITTER_CONSUMER_SECRET = ''\n\n# Things to measure to taste\nMAX_POST_LENGTH = 200\nMAX_COMMENT_LENGTH = MAX_POST_LENGTH\nMAX_TWITTER_LENGTH = 140", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "POST_NAME ", "start_line": 151, "start_column": 0, "end_line": 151, "end_column": 9 } ]

[ { "span": "POST_NAME ", "start_line": 426, "start_column": 0, "end_line": 426, "end_column": 9 } ]

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Variable defined multiple times

neurodata/ndstore/test/test_ramon.py

[ { "content": " def test_annotation_field (self):\n \"\"\"Upload an annotation and test it's fields\"\"\"\n\n # Make an annotation \n makeAnno (p, 1)\n \n # Test Status\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test confidence\n confidence = random.random ()\n f = setField(p, 'confidence', confidence)\n f = getField(p, 'confidence')\n assert confidence - float(f.read()) < 0.001\n \n # Test author\n #f = self.getField(p, 'author')\n #assert 'Unit Test' == f.read()", "metadata": "root.Test_Ramon.test_annotation_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 227 }, { "content": " def test_synapse_field (self):\n \"\"\"Upload a synapse and test it's fields\"\"\"\n\n # Make a synapse\n makeAnno (p, 2)\n\n # Test synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test the inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_synapse_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 250 }, { "content": " def test_seed_field (self):\n \"\"\"Upload a seed and test it's fields\"\"\"\n\n # Make a seed\n makeAnno (p, 3)\n\n # Test the parent\n parent = random.randint (0,100)\n f = setField(p, 'parent', parent)\n f = getField(p, 'parent')\n assert parent == int(f.read()) \n\n # Test the source\n source = random.randint (0,100)\n f = setField(p, 'source', source)\n f = getField(p, 'source')\n assert source == int(f.read()) \n\n # Test the cubelocation\n cubelocation = random.randint (0,100)\n f = setField(p, 'cubelocation', cubelocation)\n f = getField(p, 'cubelocation')\n assert cubelocation == int(f.read()) \n \n # Test the position\n position = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'position', ','.join([str(i) for i in position]))\n f = getField(p, 'position')\n assert ','.join([str(i) for i in position]) == f.read()", "metadata": "root.Test_Ramon.test_seed_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 280 }, { "content": " def test_segment_field (self):\n \"\"\"Upload a segment and test it's fields\"\"\"\n\n # Make a segment\n makeAnno (p, 4)\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the segmentclass\n segmentclass = random.randint (0,100)\n f = setField(p, 'segmentclass', segmentclass)\n f = getField(p, 'segmentclass')\n assert segmentclass == int(f.read()) \n\n # Test the neuron\n neuron = random.randint (0,100)\n f = setField(p, 'neuron', neuron)\n f = getField(p, 'neuron')\n assert neuron == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n \n # Test the synapses\n synapses = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'synapses', ','.join([str(i) for i in synapses]))\n f = getField(p, 'synapses')\n assert ','.join([str(i) for i in synapses]) == f.read()", "metadata": "root.Test_Ramon.test_segment_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 311 }, { "content": " def test_neuron_field (self):\n \"\"\"Upload a neuron and test it's fields\"\"\"\n\n # Make a neuron\n makeAnno (p, 5)\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test segments\n status = [random.randint (0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'segments', \",\".join([str(i) for i in status]))\n f = getField(p, 'segments')\n assert \",\".join([str(i) for i in status]) == f.read()", "metadata": "root.Test_Ramon.test_neuron_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 348 }, { "content": " def test_organelle_field (self):\n \"\"\"Upload an organelle and test it's fields\"\"\"\n\n # Make an organelle \n makeAnno ( p, 6 )\n\n # Test the parentseed\n parentseed = random.randint (0,100)\n f = setField(p, 'parentseed', parentseed)\n f = getField(p, 'parentseed')\n assert parentseed == int(f.read()) \n\n # Test the organelleclass\n organelleclass = random.randint (0,100)\n f = setField(p, 'organelleclass', organelleclass)\n f = getField(p, 'organelleclass')\n assert organelleclass == int(f.read()) \n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read()) \n\n # Test the seeds\n seeds = [random.randint(0,100), random.randint(0,100), random.randint(0,100)]\n f = setField(p, 'seeds', ','.join([str(i) for i in seeds]))\n f = getField(p, 'seeds')\n assert ','.join([str(i) for i in seeds]) == f.read()", "metadata": "root.Test_Ramon.test_organelle_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 366 }, { "content": " def test_wrong_field ( self ):\n \n # Make an annotation \n makeAnno (p, 2)\n\n # Test the synapse type\n synapse_type = random.randint (0,100)\n f = setField(p, 'synapse_type', synapse_type)\n f = getField(p, 'synapse_type')\n assert synapse_type == int(f.read()) \n\n # Test the weight\n weight = random.random ()\n f = setField(p, 'weight', weight)\n f = getField(p, 'weight')\n assert weight - float(f.read()) < 0.001\n\n # Test inheritance\n status = random.randint (0,100)\n f = setField(p, 'status', status)\n f = getField(p, 'status')\n assert status == int(f.read())\n \n # bad format to a number\n url = \"http://{}/ca/{}/{}/{}/setField/status/aa/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )\n \n # request a missing field\n url = \"http://{}/ca/{}/{}/{}/getField/othernonesuch/\".format(SITE_HOST, 'unittest', 'unit_anno', p.annoid)\n with pytest.raises(urllib2.HTTPError): \n req = urllib2.Request ( url )\n f = urllib2.urlopen ( url )", "metadata": "root.Test_Ramon.test_wrong_field", "header": "['class', 'Test_Ramon', ':', '___EOS___']", "index": 396 } ]

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Unused import

sunlightlabs/read_FEC/fecreader/formdata/management/commands/mark_superceded_body_rows.py

[ { "content": "from dateutil.parser import parse as dateparse\n\n\nfrom django.core.management.base import BaseCommand, CommandError\nfrom django.db.models import Sum, Max, Min\n\n\nfrom formdata.models import SkedA, SkedE\nfrom fec_alerts.models import new_filing\nfrom formdata.utils.fec_import_logging import fec_logger\n\n\n# for debugging\nfrom django.db import connection\n\n# superceded operations are slow bc of query structure -- need to hit indexes here\n \n \n \n \n \n \n \n \n \n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def mark_superceded_F24s(new_f3x_new_filing):\n \n # we only mark the child rows as superceded--the filing itself isn't, because it's possible, in theory, that it's *half* superceded. \n coverage_from_date = new_f3x_new_filing.coverage_from_date\n coverage_through_date = new_f3x_new_filing.coverage_to_date\n raw_filer_id = new_f3x_new_filing.fec_id\n \n filing_numbers = new_filing.objects.filter(fec_id=raw_filer_id, form_type__startswith='F24').values('filing_number')\n filing_array = []\n for i in filing_numbers:\n filing_array.append(i['filing_number'])\n \n updated = SkedE.objects.filter(filing_number__in=filing_array, superceded_by_amendment=False, expenditure_date_formatted__gte=coverage_from_date, expenditure_date_formatted__lte=coverage_through_date).update(superceded_by_amendment=True)\n if updated:\n print \"marked %s superceded F24s\" % updated", "metadata": "root.mark_superceded_F24s", "header": "['module', '___EOS___']", "index": 16 }, { "content": "def mark_superceded_F65s(new_f3x_new_filing):\n \n coverage_from_date = new_f3x_new_filing.coverage_from_date\n coverage_through_date = new_f3x_new_filing.coverage_to_date\n raw_filer_id = new_f3x_new_filing.fec_id\n \n filing_numbers = new_filing.objects.filter(fec_id=raw_filer_id, form_type__startswith='F6').values('filing_number')\n filing_array = []\n for i in filing_numbers:\n filing_array.append(i['filing_number'])\n updated = SkedA.objects.filter(filing_number__in=filing_array, superceded_by_amendment=False, contribution_date__gte=coverage_from_date, contribution_date__lte=coverage_through_date).update(superceded_by_amendment=True)\n if updated:\n print \"marked %s superceded F65s\" % updated", "metadata": "root.mark_superceded_F65s", "header": "['module', '___EOS___']", "index": 33 }, { "content": "def mark_superceded_F57s(new_monthly_f5):\n print \"marking superceded F57s\"\n \n coverage_from_date = new_monthly_f5.coverage_from_date\n coverage_through_date = new_monthly_f5.coverage_to_date\n raw_filer_id = new_monthly_f5.fec_id\n \n filing_numbers = new_filing.objects.filter(fec_id=raw_filer_id, is_f5_quarterly=False).values('filing_number')\n filing_array = []\n for i in filing_numbers:\n filing_array.append(i['filing_number'])\n updated = SkedE.objects.filter(form_type__istartswith='F57', filing_number__in=filing_array, superceded_by_amendment=False, expenditure_date_formatted__gte=coverage_from_date, expenditure_date_formatted__lte=coverage_through_date).update(superceded_by_amendment=True)\n if updated:\n print \"marked %s superceded F57s\" % updated", "metadata": "root.mark_superceded_F57s", "header": "['module', '___EOS___']", "index": 48 }, { "content": "def summarize_f24(new_filing):\n filing_ies = SkedE.objects.filter(filing_number=new_filing.filing_number)\n \n results = filing_ies.aggregate(tot_spent=Sum('expenditure_amount'), start_date=Min('expenditure_date_formatted'), end_date=Max('expenditure_date_formatted'))\n if results:\n new_filing.tot_spent = results['tot_spent']\n new_filing.tot_ies = results['tot_spent']\n new_filing.coverage_from_date = results['start_date']\n new_filing.coverage_to_date = results['end_date']\n new_filing.save()", "metadata": "root.summarize_f24", "header": "['module', '___EOS___']", "index": 64 }, { "content": "def summarize_f6(new_filing):\n filing_skeda = SkedA.objects.filter(filing_number=new_filing.filing_number)\n\n results = filing_skeda.aggregate(tot_raised=Sum('contribution_amount'), start_date=Min('contribution_date_formatted'), end_date=Max('contribution_date_formatted'))\n if results:\n new_filing.tot_raised = results['tot_raised']\n new_filing.coverage_from_date = results['start_date']\n new_filing.coverage_to_date = results['end_date']\n new_filing.save()", "metadata": "root.summarize_f6", "header": "['module', '___EOS___']", "index": 75 }, { "content": "def summarize_nonquarterly_f5(new_filing):\n filing_ies = SkedE.objects.filter(filing_number=new_filing.filing_number)\n \n results = filing_ies.aggregate(start_date=Min('expenditure_date_formatted'), end_date=Max('expenditure_date_formatted'))\n new_filing.coverage_from_date = results['start_date']\n new_filing.coverage_to_date = results['end_date']\n new_filing.save()", "metadata": "root.summarize_nonquarterly_f5", "header": "['module', '___EOS___']", "index": 85 }, { "content": "class Command(BaseCommand):\n help = \"Mark the body rows as being superceded as appropriate; also set the new_filing data for stuff that can only be calculated after body rows have run.\"\n requires_model_validation = False\n \n", "metadata": "root.Command", "header": "['module', '___EOS___']", "index": 94 }, { "content": " def handle(self, *args, **options):\n logger=fec_logger()\n \n filings_to_process = new_filing.objects.filter(previous_amendments_processed=True,header_is_processed=True, data_is_processed=True, body_rows_superceded=False).order_by('filing_number')\n \n for this_filing in filings_to_process:\n print \"processing %s \" % (this_filing.filing_number)\n \n \n # Create summary data for some forms that don't have it in the header. This script only runs after all the body rows of these filings have been entered; most other summary data is entered earlier in the process. \n if this_filing.form_type.upper() in ['F24', 'F24A', 'F24N']:\n summarize_f24(this_filing)\n elif this_filing.form_type.upper() in ['F6', 'F6A', 'F6N']:\n summarize_f6(this_filing)\n \n\n elif this_filing.form_type.startswith('F5') and not this_filing.is_f5_quarterly:\n summarize_nonquarterly_f5(this_filing)\n \n elif this_filing.form_type.startswith('F5') and this_filing.is_f5_quarterly:\n mark_superceded_F57s(this_filing)\n \n # if it's got sked E's and it's an F3X, overwrite 24 hr report\n elif this_filing.form_type.startswith('F3'): \n try:\n this_filing.lines_present['E']\n mark_superceded_F24s(this_filing)\n except KeyError:\n pass\n\n\n try:\n this_filing.lines_present['A']\n mark_superceded_F65s(this_filing)\n except KeyError:\n pass\n \n # By now we should have dates for all filings, including the ones that don't start with a coverage from date\n # that we added by finding the first transaction date, so we can safely set the cycle. \n if not this_filing.cycle:\n # we're about to save it, so don't hit the db twice.\n this_filing.set_cycle(save_now=False)\n \n this_filing.body_rows_superceded = True\n this_filing.save()", "metadata": "root.Command.handle", "header": "['class', 'Command', '(', 'BaseCommand', ')', ':', '___EOS___']", "index": 99 } ]

[ { "span": "from dateutil.parser import parse as dateparse", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 46 }, { "span": "from django.core.management.base import BaseCommand, CommandError", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 65 }, { "span": "from django.db import connection", "start_line": 13, "start_column": 0, "end_line": 13, "end_column": 32 } ]

[]

1

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Unused import

NikolayRag/typeTodo/PyMySQL/pymysql/tests/test_connection.py

[ { "content": "import datetime\nimport decimal\nimport time\nimport sys\nimport unittest2\nimport pymysql\nfrom pymysql.tests import base\n\n\n\n\n# A custom type and function to escape it\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class TestConnection(base.PyMySQLTestCase):\n\n\n\n\n\n\n\n\n\n", "metadata": "root.TestConnection", "header": "['module', '___EOS___']", "index": 9 }, { "content": " def test_utf8mb4(self):\n \"\"\"This test requires MySQL >= 5.5\"\"\"\n arg = self.databases[0].copy()\n arg['charset'] = 'utf8mb4'\n conn = pymysql.connect(**arg)", "metadata": "root.TestConnection.test_utf8mb4", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 10 }, { "content": " def test_largedata(self):\n \"\"\"Large query and response (>=16MB)\"\"\"\n cur = self.connections[0].cursor()\n cur.execute(\"SELECT @@max_allowed_packet\")\n if cur.fetchone()[0] < 16*1024*1024 + 10:\n print(\"Set max_allowed_packet to bigger than 17MB\")\n return\n t = 'a' * (16*1024*1024)\n cur.execute(\"SELECT '\" + t + \"'\")\n assert cur.fetchone()[0] == t", "metadata": "root.TestConnection.test_largedata", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 16 }, { "content": " def test_autocommit(self):\n con = self.connections[0]\n self.assertFalse(con.get_autocommit())\n\n cur = con.cursor()\n cur.execute(\"SET AUTOCOMMIT=1\")\n self.assertTrue(con.get_autocommit())\n\n con.autocommit(False)\n self.assertFalse(con.get_autocommit())\n cur.execute(\"SELECT @@AUTOCOMMIT\")\n self.assertEqual(cur.fetchone()[0], 0)", "metadata": "root.TestConnection.test_autocommit", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 27 }, { "content": " def test_select_db(self):\n con = self.connections[0]\n current_db = self.databases[0]['db']\n other_db = self.databases[1]['db']\n\n cur = con.cursor()\n cur.execute('SELECT database()')\n self.assertEqual(cur.fetchone()[0], current_db)\n\n con.select_db(other_db)\n cur.execute('SELECT database()')\n self.assertEqual(cur.fetchone()[0], other_db)", "metadata": "root.TestConnection.test_select_db", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 40 }, { "content": " def test_connection_gone_away(self):\n \"\"\"\n http://dev.mysql.com/doc/refman/5.0/en/gone-away.html\n http://dev.mysql.com/doc/refman/5.0/en/error-messages-client.html#error_cr_server_gone_error\n \"\"\"\n con = self.connections[0]\n cur = con.cursor()\n cur.execute(\"SET wait_timeout=1\")\n time.sleep(2)\n with self.assertRaises(pymysql.OperationalError) as cm:\n cur.execute(\"SELECT 1+1\")\n # error occures while reading, not writing because of socket buffer.\n #self.assertEquals(cm.exception.args[0], 2006)\n self.assertIn(cm.exception.args[0], (2006, 2013))", "metadata": "root.TestConnection.test_connection_gone_away", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 53 }, { "content": " def test_init_command(self):\n conn = pymysql.connect(\n init_command='SELECT \"bar\"; SELECT \"baz\"',\n **self.databases[0]\n )\n c = conn.cursor()\n c.execute('select \"foobar\";')\n self.assertEqual(('foobar',), c.fetchone())\n conn.close()\n with self.assertRaises(pymysql.err.Error):\n conn.ping(reconnect=False)", "metadata": "root.TestConnection.test_init_command", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 68 }, { "content": " def test_read_default_group(self):\n conn = pymysql.connect(\n read_default_group='client',\n **self.databases[0]\n )\n self.assertTrue(conn.open)", "metadata": "root.TestConnection.test_read_default_group", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 80 }, { "content": " def test_context(self):\n with self.assertRaises(ValueError):\n c = pymysql.connect(**self.databases[0])\n with c as cur:\n cur.execute('create table test ( a int )')\n c.begin()\n cur.execute('insert into test values ((1))')\n raise ValueError('pseudo abort')\n c.commit()\n c = pymysql.connect(**self.databases[0])\n with c as cur:\n cur.execute('select count(*) from test')\n self.assertEqual(0, cur.fetchone()[0])\n cur.execute('insert into test values ((1))')\n with c as cur:\n cur.execute('select count(*) from test')\n self.assertEqual(1,cur.fetchone()[0])\n cur.execute('drop table test')", "metadata": "root.TestConnection.test_context", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 87 }, { "content": " def test_set_charset(self):\n c = pymysql.connect(**self.databases[0])\n c.set_charset('utf8')\n # TODO validate setting here", "metadata": "root.TestConnection.test_set_charset", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 106 }, { "content": " def test_defer_connect(self):\n import socket\n for db in self.databases:\n d = db.copy()\n try:\n sock = socket.socket(socket.AF_UNIX, socket.SOCK_STREAM)\n sock.connect(d['unix_socket'])\n except KeyError:\n sock = socket.create_connection(\n (d.get('host', 'localhost'), d.get('port', 3306)))\n for k in ['unix_socket', 'host', 'port']:\n try:\n del d[k]\n except KeyError:\n pass\n\n c = pymysql.connect(defer_connect=True, **d)\n self.assertFalse(c.open)\n c.connect(sock)\n c.close()", "metadata": "root.TestConnection.test_defer_connect", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 111 }, { "content": " @unittest2.skipUnless(sys.version_info[0:2] >= (3,2), \"required py-3.2\")\n def test_no_delay_warning(self):\n current_db = self.databases[0].copy()\n current_db['no_delay'] = True\n with self.assertWarns(DeprecationWarning) as cm:\n conn = pymysql.connect(**current_db)", "metadata": "root.TestConnection.test_no_delay_warning", "header": "['class', 'TestConnection', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 132 }, { "content": "class Foo(object):\n value = \"bar\"", "metadata": "root.Foo", "header": "['module', '___EOS___']", "index": 141 }, { "content": "def escape_foo(x, d):\n return x.value", "metadata": "root.escape_foo", "header": "['module', '___EOS___']", "index": 145 }, { "content": "class TestEscape(base.PyMySQLTestCase):\n\n\n\n\n\n", "metadata": "root.TestEscape", "header": "['module', '___EOS___']", "index": 149 }, { "content": " def test_escape_string(self):\n con = self.connections[0]\n cur = con.cursor()\n\n self.assertEqual(con.escape(\"foo'bar\"), \"'foo\\\\'bar'\")\n # added NO_AUTO_CREATE_USER as not including it in 5.7 generates warnings\n cur.execute(\"SET sql_mode='NO_BACKSLASH_ESCAPES,NO_AUTO_CREATE_USER'\")\n self.assertEqual(con.escape(\"foo'bar\"), \"'foo''bar'\")", "metadata": "root.TestEscape.test_escape_string", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 150 }, { "content": " def test_escape_builtin_encoders(self):\n con = self.connections[0]\n cur = con.cursor()\n\n val = datetime.datetime(2012, 3, 4, 5, 6)\n self.assertEqual(con.escape(val, con.encoders), \"'2012-03-04 05:06:00'\")", "metadata": "root.TestEscape.test_escape_builtin_encoders", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 159 }, { "content": " def test_escape_custom_object(self):\n con = self.connections[0]\n cur = con.cursor()\n\n mapping = {Foo: escape_foo}\n self.assertEqual(con.escape(Foo(), mapping), \"bar\")", "metadata": "root.TestEscape.test_escape_custom_object", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 166 }, { "content": " def test_escape_fallback_encoder(self):\n con = self.connections[0]\n cur = con.cursor()\n\n class Custom(str):\n pass\n\n mapping = {pymysql.text_type: pymysql.escape_string}\n self.assertEqual(con.escape(Custom('foobar'), mapping), \"'foobar'\")", "metadata": "root.TestEscape.test_escape_fallback_encoder", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 173 }, { "content": " def test_escape_no_default(self):\n con = self.connections[0]\n cur = con.cursor()\n\n self.assertRaises(TypeError, con.escape, 42, {})", "metadata": "root.TestEscape.test_escape_no_default", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 183 }, { "content": " def test_escape_dict_value(self):\n con = self.connections[0]\n cur = con.cursor()\n\n mapping = con.encoders.copy()\n mapping[Foo] = escape_foo\n self.assertEqual(con.escape({'foo': Foo()}, mapping), {'foo': \"bar\"})", "metadata": "root.TestEscape.test_escape_dict_value", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 189 }, { "content": " def test_escape_list_item(self):\n con = self.connections[0]\n cur = con.cursor()\n\n mapping = con.encoders.copy()\n mapping[Foo] = escape_foo\n self.assertEqual(con.escape([Foo()], mapping), \"(bar)\")", "metadata": "root.TestEscape.test_escape_list_item", "header": "['class', 'TestEscape', '(', 'base', '.', 'PyMySQLTestCase', ')', ':', '___EOS___']", "index": 197 } ]

[ { "span": "import decimal", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 14 } ]

[]

1

false

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2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 4, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2 ]

Imprecise assert

rizar/attention-lvcsr/libs/Theano/theano/tensor/tests/test_subtensor.py

[ { "content": " def test1_ok_range_finite(self):\n n = self.shared(numpy.arange(3, dtype=self.dtype))\n t = n[0:2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [0, 1]).all())", "metadata": "root.T_subtensor.test1_ok_range_finite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 157 }, { "content": " def test2_ok_range_finite(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((3, 4)))\n # Also check negative index\n for idx in [(slice(0, 2), 3), ((slice(0, 2), -1)), (slice(0, 2), -4)]:\n t = n[idx] # l]#0:2,3]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.allclose(tval, n.get_value()[idx]))", "metadata": "root.T_subtensor.test2_ok_range_finite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 165 }, { "content": " def test1_ok_elem(self):\n n = self.shared(numpy.ones(1, dtype=self.dtype) * 5)\n t = n[0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == ())\n self.assertTrue(tval == 5.0)", "metadata": "root.T_subtensor.test1_ok_elem", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 191 }, { "content": " def test1_ok_range_infinite(self):\n n = self.shared(numpy.arange(3, dtype=self.dtype))\n t = n[1:]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [1.0, 2.0]).all())", "metadata": "root.T_subtensor.test1_ok_range_infinite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 199 }, { "content": " def test1_ok_strided(self):\n n = self.shared(numpy.arange(5, dtype=self.dtype))\n t = n[1::2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [1.0, 3.0]).all())\n\n t = n[0:-1:2] # 0 to 1 from the end stepping by 2\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue((tval == [0.0, 2.0]).all())", "metadata": "root.T_subtensor.test1_ok_strided", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 207 }, { "content": " def test2_ok_elem(self):\n n = self.shared(numpy.arange(6, dtype=self.dtype).reshape((2, 3)))\n t = n[0, 2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == ())\n self.assertTrue(numpy.all(tval == 2))", "metadata": "root.T_subtensor.test2_ok_elem", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 252 }, { "content": " def test2_ok_row(self):\n n = self.shared(numpy.arange(6, dtype=self.dtype).reshape((2, 3)))\n t = n[1]\n self.assertFalse(any(n.type.broadcastable))\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (3,))\n self.assertTrue(numpy.all(tval == [3, 4, 5]))", "metadata": "root.T_subtensor.test2_ok_row", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 260 }, { "content": " def test2_ok_col(self):\n n = self.shared(numpy.arange(6, dtype=self.dtype).reshape((2, 3)))\n t = n[:, 0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n self.assertFalse(any(n.type.broadcastable))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.all(tval == [0, 3]))", "metadata": "root.T_subtensor.test2_ok_col", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 269 }, { "content": " def test2_ok_rows_finite(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((4, 3)))\n t = n[1:3, 0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.all(tval == [3, 6]))", "metadata": "root.T_subtensor.test2_ok_rows_finite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 278 }, { "content": " def test2_ok_cols_infinite(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((4, 3)))\n t = n[1, 2:]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (1,))\n self.assertTrue(numpy.all(tval == 5))", "metadata": "root.T_subtensor.test2_ok_cols_infinite", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 286 }, { "content": " def test2_ok_strided(self):\n n = self.shared(numpy.arange(20, dtype=self.dtype).reshape((4, 5)))\n t = n[1:4:2, 1:5:2]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2, 2))\n self.assertTrue(numpy.all(tval == [[6, 8], [16, 18]]))", "metadata": "root.T_subtensor.test2_ok_strided", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 294 }, { "content": " def test3_ok_mat(self):\n n = self.shared(numpy.arange(24, dtype=self.dtype).reshape((2, 3, 4)))\n t = n[0, 0, 0]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == ())\n self.assertTrue(numpy.all(tval == 0))", "metadata": "root.T_subtensor.test3_ok_mat", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 302 }, { "content": " def test_long(self):\n n = self.shared(numpy.arange(12, dtype=self.dtype).reshape((4, 3)))\n t = n[L(1):L(4):L(2), L(1)]\n self.assertTrue(isinstance(t.owner.op, Subtensor))\n tval = self.eval_output_and_check(t)\n self.assertTrue(tval.shape == (2,))\n self.assertTrue(numpy.all(tval == [4, 10]))", "metadata": "root.T_subtensor.test_long", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 310 }, { "content": " def test_ok_list(self):\n for data, idx in [(rand(4), [1, 0]),\n (rand(4, 5), [2, 3, -1]),\n (rand(4, 2, 3), [0, 3]),\n (rand(4, 2, 3), [3, 3, 1, 1, 2, 2, 0, 0]),\n (rand(4, 2, 3), [3, 3, 1, 1, 2, 2, 0, 0,\n -1, -2, -3, -4]),\n # Test 4 dims as gpu code use another algo\n # in that case This new algo is not as much\n # optimized for that case.\n (rand(4, 4, 2, 3), [3,\n 3, 1, 1, 2, 2, 0, 0, -1, -2, -3, -4]),\n # Test with TensorConstant index.\n (rand(4, 2, 3),\n theano.tensor.constant([3, 3, 1, 1, 2, 2, 0, 0])),\n ]:\n data = numpy.asarray(data, dtype=self.dtype)\n n = self.shared(data)\n t = n[idx]\n\n # We test again AdvancedSubtensor1 as we transfer data to the cpu.\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor1))\n\n val = self.eval_output_and_check(t, list=True)\n if isinstance(idx, list):\n good = data[idx]\n else:\n good = data[idx.data]\n self.assertTrue(val.ndim == data.ndim)\n self.assertTrue(numpy.allclose(val, good), (val, good))\n\n # Test reuse of output memory\n if type(self.adv_sub1) == tensor.AdvancedSubtensor1:\n op = self.adv_sub1()\n # When idx is a TensorConstant.\n if hasattr(idx, \"data\"):\n idx = idx.data\n test_out = [[None]]\n op.perform(None, [data, idx], test_out)\n out1 = test_out[0][0]\n op.perform(None, [data, idx], test_out)\n out2 = test_out[0][0]\n assert out1 is out2\n\n # test the grad\n gn = theano.grad(t.sum(), n)\n g = self.function([], gn, op=self.adv_incsub1)\n utt.verify_grad(lambda m: m[[1, 3]],\n [numpy.random.rand(5, 5).astype(self.dtype)])\n g_0 = g()\n utt.verify_grad(lambda m: m[idx],\n [data])", "metadata": "root.T_subtensor.test_ok_list", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 437 }, { "content": " def test_adv_sub1_broadcast(self):\n v = numpy.arange(3, dtype=self.dtype).reshape((1, 3))\n n = self.shared(v*5, broadcastable=(True, False))\n idx = tensor.lvector()\n t = n[idx]\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor1))\n\n f = self.function([idx], t, op=self.adv_sub1)\n topo = f.maker.fgraph.toposort()\n topo_ = [node for node in topo if not isinstance(node.op,\n self.ignore_topo)]\n assert len(topo_) == 1\n self.assertTrue(isinstance(topo_[0].op, self.adv_sub1))\n f_0 = f([0])\n self.assertTrue(f_0.shape == (1, 3))\n self.assertTrue(numpy.allclose(f_0, v*5))\n f_00 = f([0, 0])\n self.assertTrue(f_00.shape == (2, 3))\n self.assertTrue(numpy.allclose(f_00, v*5))\n self.assertRaises(IndexError, f, [0, 1])\n\n # Test the gradient\n c = t.sum()\n gn = theano.grad(c, n)\n g = self.function([idx], gn, op=self.adv_incsub1)\n g_0 = g([0])\n self.assertTrue(g_0.shape == (1, 3))\n self.assertTrue(numpy.allclose(g_0, 1))\n g_00 = g([0, 0])\n self.assertTrue(g_00.shape == (1, 3))\n self.assertTrue(numpy.allclose(g_00, 2))\n\n utt.verify_grad(lambda m: m[[1, 3]],\n [numpy.random.rand(5, 5).astype(self.dtype)])\n\n def fun(x, y):\n return advanced_inc_subtensor1(x, y, [1, 3])\n utt.verify_grad(fun, [numpy.random.rand(5, 5).astype(self.dtype),\n numpy.random.rand(2, 5).astype(self.dtype)])\n\n def fun(x, y):\n return advanced_set_subtensor1(x, y, [1, 3])\n utt.verify_grad(fun, [numpy.random.rand(5, 5).astype(self.dtype),\n numpy.random.rand(2, 5).astype(self.dtype)])", "metadata": "root.T_subtensor.test_adv_sub1_broadcast", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 516 }, { "content": " def test_adv_sub1_idx_broadcast(self):\n # The idx can be a broadcastable vector.\n ones = numpy.ones((4, 3), dtype=self.dtype)\n n = self.shared(ones * 5)\n idx = tensor.TensorType(dtype='int64', broadcastable=(True,))()\n assert idx.type.broadcastable == (True,)\n t = n[idx]\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor1))\n\n f = self.function([idx], t, op=self.adv_sub1)\n topo = f.maker.fgraph.toposort()\n topo_ = [node for node in topo if not isinstance(node.op,\n self.ignore_topo)]\n assert len(topo_) == 1\n self.assertTrue(isinstance(topo_[0].op, self.adv_sub1))\n f_0 = f([0])\n self.assertTrue(f_0.shape == (1, 3))\n self.assertTrue(numpy.allclose(f_0, 5))\n\n # Test the gradient\n c = t.sum()\n gn = theano.grad(c, n)\n g = self.function([idx], gn, op=self.adv_incsub1)\n g_0 = g([0])\n self.assertTrue(g_0.shape == (4, 3))\n self.assertTrue(numpy.allclose(g_0[0], 1))\n self.assertTrue(numpy.allclose(g_0[1:], 0))", "metadata": "root.T_subtensor.test_adv_sub1_idx_broadcast", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 561 }, { "content": " def grad_list_(self, idxs, data):\n n = self.shared(data)\n\n for idx in idxs:\n # Should stay on the cpu.\n idx_ = _shared(numpy.asarray(idx))\n t = n[idx_]\n gn = theano.tensor.grad(theano.tensor.sum(theano.tensor.exp(t)), n)\n f = self.function([], [gn, gn.shape], op=self.adv_incsub1)\n topo = f.maker.fgraph.toposort()\n if not self.fast_compile:\n assert any([isinstance(node.op, self.\n adv_incsub1) and node.op.inplace for node in topo])\n else:\n assert any([isinstance(node.op, self.\n adv_incsub1) for node in topo])\n assert any([isinstance(node.op, self.adv_sub1) for node in topo])\n gval, gshape = f()\n good = numpy.zeros_like(data)\n # don't work when the same index is used many time\n # good[idx] += numpy.exp(data[idx])\n for i in idx:\n good[i] += numpy.exp(data[i])\n self.assertTrue(gval.ndim == data.ndim)\n self.assertTrue(numpy.allclose(gval, good), (gval, good))\n self.assertTrue(numpy.allclose(gshape, data.shape))\n\n def fct(t):\n return theano.tensor.sum(t[idx_])\n utt.verify_grad(fct, [data])\n\n # Test the grad of the grad (e.i. AdvancedIncSubtensor1.grad)\n def fct2(t):\n return theano.tensor.grad(theano.tensor.sum(t[idx_]), t)\n utt.verify_grad(fct2, [data])\n\n # Test shape of AdvancedIncSubtensor1 and AdvancedSubtensor1\n if not self.fast_compile:\n ops = (self.adv_incsub1, self.adv_sub1)\n else:\n ops = self.ops\n if idx is idxs[0]:\n f = self.function([], [gn.shape, n[idx_].shape],\n op=ops,\n N=0, N_fast=2)\n f()", "metadata": "root.T_subtensor.grad_list_", "header": "['class', 'T_subtensor', '(', 'unittest', '.', 'TestCase', ',', 'utt', '.', 'TestOptimizationMixin', ')', ':', '___EOS___']", "index": 777 }, { "content": " def test_index_w_int_and_vec(self):\n # like test_ok_list, but with a single index on the first one\n # data has to have at least 2 dimensions\n for data, idx in [(rand(4, 5), [2, 3]),\n (rand(2, 4, 3), [0, 3]),\n (rand(2, 4, 3), [3, 3, 1, 1, 2, 2, 0, 0]),\n (rand(2, 4, 3), [3, 3, 1, 1, 2, 2, 0, 0,\n -1, -2, -3, -4]),\n # Test 4 dims as gpu code use another algo\n # in that case This new algo is not as much\n # optimized for that case.\n (rand(4, 4, 2, 3), [3,\n 3, 1, 1, 2, 2, 0, 0, -1, -2, -3, -4]),\n # Test with TensorConstant index.\n (rand(2, 4, 3),\n theano.tensor.constant([3, 3, 1, 1, 2, 2, 0, 0])),\n ]:\n data = numpy.asarray(data, dtype=self.dtype)\n n = self.shared(data)\n t = n[0, idx]\n\n self.assertTrue(isinstance(t.owner.op, tensor.AdvancedSubtensor))\n\n val = self.eval_output_and_check(t)\n if isinstance(idx, list):\n good = data[0, idx]\n else:\n good = data[0, idx.data]\n self.assertTrue(val.ndim == data.ndim - 1)\n self.assertTrue(numpy.allclose(val, good), (val, good))", "metadata": "root.TestAdvancedSubtensor.test_index_w_int_and_vec", "header": "['class', 'TestAdvancedSubtensor', '(', 'unittest', '.', 'TestCase', ')', ':', '___NEWLINE___', '# test inc_subtensor', '___NL___', '# also tests set_subtensor', '___NL___', '___EOS___']", "index": 1307 } ]

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Unused import

fusionbox/django-widgy/widgy/__init__.py

[ { "content": "import traceback\nimport sys\n\nfrom django.core.exceptions import ImproperlyConfigured\n\n\n\n\n\n\nregistry = Registry()\nregister = registry.register\nunregister = registry.unregister\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class BaseRegistry(set):\n \"\"\"\n Container class for unique Django models.\n\n A model must be registered with a registry to be visible to Widgy.\n \"\"\"\n", "metadata": "root.BaseRegistry", "header": "['module', '___EOS___']", "index": 6 }, { "content": " def register(self, model):\n from django.db import models\n if model in self:\n raise ImproperlyConfigured(\n \"You cannot register the same model ('{0}') twice.\"\n .format(model)\n )\n if not issubclass(model, models.Model):\n raise ImproperlyConfigured((\"{0} is not a subclass of django.db.models.Model, \"\n \"so it cannot be registered\").format(model))\n if model._meta.abstract:\n raise ImproperlyConfigured(\"You cannot register the abstract class {0}\".format(model))\n self.add(model)\n\n # allow use as a decorator\n return model", "metadata": "root.BaseRegistry.register", "header": "['class', 'BaseRegistry', '(', 'set', ')', ':', '___EOS___']", "index": 12 }, { "content": " def unregister(self, model):\n self.remove(model)", "metadata": "root.BaseRegistry.unregister", "header": "['class', 'BaseRegistry', '(', 'set', ')', ':', '___EOS___']", "index": 29 }, { "content": "class Registry(BaseRegistry):\n \"\"\"\n Container class for all widgets available for use in widgy.\n\n A widget must be registered with the registry in order to appear in the\n available widgets box.\n \"\"\"\n", "metadata": "root.Registry", "header": "['module', '___EOS___']", "index": 33 }, { "content": " def register(self, content):\n from widgy.models import Content\n if not issubclass(content, Content):\n raise ImproperlyConfigured(\n \"{0} is not a subclass of Content, so it cannot be registered\".format(content)\n )\n return super(Registry, self).register(content)", "metadata": "root.Registry.register", "header": "['class', 'Registry', '(', 'BaseRegistry', ')', ':', '___EOS___']", "index": 41 } ]

[ { "span": "import traceback", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 16 }, { "span": "import sys", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 10 } ]

[]

1

false

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Unused import

scieloorg/scielo-manager/scielomanager/validator/tests/tests_pages.py

[ { "content": "# coding:utf-8\nfrom os import path\nimport unittest\nimport mocker\nfrom PIL import Image\nimport StringIO\n\nfrom django.core.urlresolvers import reverse\nfrom django_webtest import WebTest\nfrom django.conf import settings\nfrom django_factory_boy import auth\nfrom django.core.files.uploadedfile import InMemoryUploadedFile\n\nfrom . import doubles\nimport pkg_resources\n\nPACKTOOLS_VERSION = pkg_resources.get_distribution('packtools').version\n\n\n\n\n\n\n\n\n\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def _get_test_xml_abspath(filename):\n folder_path = settings.PROJECT_PATH\n folder_path = settings.PROJECT_PATH.split('/')\n folder_path.extend(['validator', 'tests', 'xml_tests_files', filename])\n return '/'.join(folder_path)", "metadata": "root._get_test_xml_abspath", "header": "['module', '___EOS___']", "index": 19 }, { "content": "def get_temporary_text_file():\n io = StringIO.StringIO()\n io.write('foo')\n text_file = InMemoryUploadedFile(io, field_name='file', name='foo.txt', content_type='text', size=io.len, charset='utf8')\n text_file.seek(0)\n return text_file", "metadata": "root.get_temporary_text_file", "header": "['module', '___EOS___']", "index": 26 }, { "content": "def get_temporary_image_file():\n io = StringIO.StringIO()\n size = (200, 200)\n color = (255, 0, 0, 0)\n image = Image.new(\"RGBA\", size, color)\n image.save(io, format='PNG')\n image_file = InMemoryUploadedFile(io, field_name='file', name='foo.png', content_type='png', size=io.len, charset=None)\n image_file.seek(0)\n return image_file", "metadata": "root.get_temporary_image_file", "header": "['module', '___EOS___']", "index": 34 }, { "content": "def get_temporary_xml_file(xml_abs_path):\n fp = open(xml_abs_path)\n io = StringIO.StringIO(fp.read())\n fp.close()\n xml_file = InMemoryUploadedFile(io, field_name='file', name='foo.xml', content_type='text/xml', size=io.len, charset='utf8')\n xml_file.seek(0)\n return xml_file", "metadata": "root.get_temporary_xml_file", "header": "['module', '___EOS___']", "index": 45 }, { "content": "class ValidatorTests(WebTest, mocker.MockerTestCase):\n\n\n\n\n\n\n", "metadata": "root.ValidatorTests", "header": "['module', '___EOS___']", "index": 54 }, { "content": " def test_access_unauthenticated_user(self):\n response = self.app.get(\n reverse('validator.packtools.stylechecker',),\n )\n self.assertEqual(response.status_code, 200)\n self.assertTemplateUsed(response, 'validator/stylechecker.html')", "metadata": "root.ValidatorTests.test_access_unauthenticated_user", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 56 }, { "content": " def test_access_authenticated_user(self):\n self.user = auth.UserF(is_active=True)\n response = self.app.get(\n reverse('validator.packtools.stylechecker',),\n user=self.user\n )\n self.assertEqual(response.status_code, 200)\n self.assertTemplateUsed(response, 'validator/stylechecker.html')", "metadata": "root.ValidatorTests.test_access_authenticated_user", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 63 }, { "content": " def test_link_is_present_at_homepage(self):\n response = self.app.get(\n reverse('index',),\n )\n # response redirecto to login\n self.assertEqual(response.status_code, 302)\n response = response.follow()\n self.assertEqual(response.status_code, 200)\n self.assertTemplateUsed(response, 'registration/login.html')\n expected_url = reverse('validator.packtools.stylechecker',)\n response.mustcontain('href=\"%s\"' % expected_url)", "metadata": "root.ValidatorTests.test_link_is_present_at_homepage", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 72 }, { "content": " def test_submit_empty_form_is_not_valid(self):\n # with\n page = self.app.get(\n reverse('validator.packtools.stylechecker',),\n )\n form = page.forms['xml_upload_form']\n # when\n response = form.submit()\n # then\n self.assertTemplateUsed(response, 'validator/stylechecker.html')\n self.assertFalse(response.context['form'].is_valid())\n form_errors = response.context['form'].errors\n expected_errors = {'file': [u'This field is required.']}\n self.assertEqual(form_errors, expected_errors)\n self.assertFalse(hasattr(response.context, 'results'))", "metadata": "root.ValidatorTests.test_submit_empty_form_is_not_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 84 }, { "content": " def test_submit_text_file_then_form_not_valid(self):\n \"\"\"\n Submitting a text file will raise a from validation error\n \"\"\"\n # with\n test_file = get_temporary_text_file()\n # when\n response = self.client.post(\n reverse('validator.packtools.stylechecker',),\n {\n 'file': test_file\n }\n )\n # then\n form = response.context['form']\n self.assertFalse(response.context['form'].is_valid())\n expected_errors = {\n 'file': [u'This type of file is not allowed! Please select another file.']\n }\n self.assertEqual(form.errors, expected_errors)", "metadata": "root.ValidatorTests.test_submit_text_file_then_form_not_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 100 }, { "content": " def test_submit_image_file_then_form_not_valid(self):\n \"\"\"\n Submitting a image file will raise a from validation error\n \"\"\"\n # with\n test_file = get_temporary_image_file()\n # when\n response = self.client.post(\n reverse('validator.packtools.stylechecker',),\n {\n 'file': test_file\n }\n )\n # then\n form = response.context['form']\n self.assertFalse(response.context['form'].is_valid())\n expected_errors = {'file': [u'This type of file is not allowed! Please select another file.']}\n self.assertEqual(form.errors, expected_errors)", "metadata": "root.ValidatorTests.test_submit_image_file_then_form_not_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 121 }, { "content": " def test_submit_valid_xml_file_then_get_annotations_form_valid(self):\n \"\"\"\n Submitting a xml file that generate annotations will let the form as valid,\n and xml validation will return annotations\n \"\"\"\n # with\n\n stub_analyze_xml = doubles.make_stub_analyze_xml('valid')\n mock_utils = self.mocker.replace('validator.utils')\n mock_utils.analyze_xml\n self.mocker.result(stub_analyze_xml)\n\n self.mocker.replay()\n\n test_file_path = _get_test_xml_abspath('with_style_errors.xml')\n test_file = get_temporary_xml_file(test_file_path)\n\n # when\n response = self.client.post(\n reverse('validator.packtools.stylechecker',),\n {\n 'file': test_file\n }\n )\n\n # then\n form = response.context['form']\n xml_exception = response.context['xml_exception']\n results = response.context['results']\n\n self.assertTrue(form.is_valid())\n self.assertTemplateUsed('validator/stylechecker.html')\n\n # the template cares about this keys\n self.assertEqual(results.keys(), ['validation_errors', 'meta', 'annotations'])", "metadata": "root.ValidatorTests.test_submit_valid_xml_file_then_get_annotations_form_valid", "header": "['class', 'ValidatorTests', '(', 'WebTest', ',', 'mocker', '.', 'MockerTestCase', ')', ':', '___EOS___']", "index": 140 } ]

[ { "span": "from os import path", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 19 }, { "span": "import unittest", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 15 } ]

[]

1

false

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Unused local variable

tornadoweb/tornado/tornado/gen.py

[ { "content": "def _make_coroutine_wrapper(func, replace_callback):\n \"\"\"The inner workings of ``@gen.coroutine`` and ``@gen.engine``.\n\n The two decorators differ in their treatment of the ``callback``\n argument, so we cannot simply implement ``@engine`` in terms of\n ``@coroutine``.\n \"\"\"\n # On Python 3.5, set the coroutine flag on our generator, to allow it\n # to be used with 'await'.\n if hasattr(types, 'coroutine'):\n func = types.coroutine(func)\n\n @functools.wraps(func)\n def wrapper(*args, **kwargs):\n future = TracebackFuture()\n\n if replace_callback and 'callback' in kwargs:\n callback = kwargs.pop('callback')\n IOLoop.current().add_future(\n future, lambda future: callback(future.result()))\n\n try:\n result = func(*args, **kwargs)\n except (Return, StopIteration) as e:\n result = _value_from_stopiteration(e)\n except Exception:\n future.set_exc_info(sys.exc_info())\n return future\n else:\n if isinstance(result, GeneratorType):\n # Inline the first iteration of Runner.run. This lets us\n # avoid the cost of creating a Runner when the coroutine\n # never actually yields, which in turn allows us to\n # use \"optional\" coroutines in critical path code without\n # performance penalty for the synchronous case.\n try:\n orig_stack_contexts = stack_context._state.contexts\n yielded = next(result)\n if stack_context._state.contexts is not orig_stack_contexts:\n yielded = TracebackFuture()\n yielded.set_exception(\n stack_context.StackContextInconsistentError(\n 'stack_context inconsistency (probably caused '\n 'by yield within a \"with StackContext\" block)'))\n except (StopIteration, Return) as e:\n future.set_result(_value_from_stopiteration(e))\n except Exception:\n future.set_exc_info(sys.exc_info())\n else:\n Runner(result, future, yielded)\n try:\n return future\n finally:\n # Subtle memory optimization: if next() raised an exception,\n # the future's exc_info contains a traceback which\n # includes this stack frame. This creates a cycle,\n # which will be collected at the next full GC but has\n # been shown to greatly increase memory usage of\n # benchmarks (relative to the refcount-based scheme\n # used in the absence of cycles). We can avoid the\n # cycle by clearing the local variable after we return it.\n future = None\n future.set_result(result)\n return future\n return wrapper", "metadata": "root._make_coroutine_wrapper", "header": "['module', '___EOS___']", "index": 247 } ]

[ { "span": "future ", "start_line": 308, "start_column": 20, "end_line": 308, "end_column": 26 } ]

[]

1

true

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Unreachable code

amrdraz/kodr/app/brython/www/src/Lib/test/test_asyncore.py

[ { "content": " def test_compact_traceback(self):\n try:\n raise Exception(\"I don't like spam!\")\n except:\n real_t, real_v, real_tb = sys.exc_info()\n r = asyncore.compact_traceback()\n else:\n self.fail(\"Expected exception\")\n\n (f, function, line), t, v, info = r\n self.assertEqual(os.path.split(f)[-1], 'test_asyncore.py')\n self.assertEqual(function, 'test_compact_traceback')\n self.assertEqual(t, real_t)\n self.assertEqual(v, real_v)\n self.assertEqual(info, '[%s|%s|%s]' % (f, function, line))", "metadata": "root.HelperFunctionTests.test_compact_traceback", "header": "['class', 'HelperFunctionTests', '(', 'unittest', '.', 'TestCase', ')', ':', '___EOS___']", "index": 221 }, { "content": " def test_handle_error(self):\n\n class TestClient(BaseClient):\n def handle_write(self):\n 1.0 / 0\n def handle_error(self):\n self.flag = True\n try:\n raise\n except ZeroDivisionError:\n pass\n else:\n raise Exception(\"exception not raised\")\n\n server = BaseServer(self.family, self.addr)\n client = TestClient(self.family, server.address)\n self.loop_waiting_for_flag(client)", "metadata": "root.BaseTestAPI.test_handle_error", "header": "['class', 'BaseTestAPI', ':', '___EOS___']", "index": 689 } ]

[ { "span": "self.fail(\"Expected exception\")", "start_line": 228, "start_column": 12, "end_line": 228, "end_column": 43 }, { "span": "raise Exception(\"exception not raised\")", "start_line": 701, "start_column": 20, "end_line": 701, "end_column": 59 } ]

[]

1

true

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Variable defined multiple times

networkx/networkx/networkx/algorithms/tests/test_cycles.py

[ { "content": " def test_cycle_basis(self):\n G=self.G\n cy=networkx.cycle_basis(G,0)\n sort_cy= sorted( sorted(c) for c in cy )\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5]])\n cy=networkx.cycle_basis(G,1)\n sort_cy= sorted( sorted(c) for c in cy )\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5]])\n cy=networkx.cycle_basis(G,9)\n sort_cy= sorted( sorted(c) for c in cy )\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5]])\n # test disconnected graphs\n nx.add_cycle(G, \"ABC\")\n cy=networkx.cycle_basis(G,9)\n sort_cy= sorted(sorted(c) for c in cy[:-1]) + [sorted(cy[-1])]\n assert_equal(sort_cy, [[0,1,2,3],[0,1,6,7,8],[0,3,4,5],['A','B','C']])", "metadata": "root.TestCycles.test_cycle_basis", "header": "['class', 'TestCycles', ':', '___EOS___']", "index": 25 }, { "content": " @raises(nx.NetworkXNotImplemented)\n def test_cycle_basis(self):\n G=nx.DiGraph()\n cy=networkx.cycle_basis(G,0)", "metadata": "root.TestCycles.test_cycle_basis", "header": "['class', 'TestCycles', ':', '___EOS___']", "index": 42 }, { "content": " def test_multidigraph_ignore2(self):\n # Loop traversed an edge while ignoring its orientation.\n G = nx.MultiDiGraph([(0,1), (1,2), (1,2)])\n x = list(find_cycle(G, [0,1,2], orientation='ignore'))\n x_ = [(1,2,0,FORWARD), (1,2,1,REVERSE)]\n assert_equal(x, x_)", "metadata": "root.TestFindCycle.test_multidigraph_ignore2", "header": "['class', 'TestFindCycle', '(', 'object', ')', ':', '___EOS___']", "index": 192 }, { "content": " def test_multidigraph_ignore2(self):\n # Node 2 doesn't need to be searched again from visited from 4.\n # The goal here is to cover the case when 2 to be researched from 4,\n # when 4 is visited from the first time (so we must make sure that 4\n # is not visited from 2, and hence, we respect the edge orientation).\n G = nx.MultiDiGraph([(0,1), (1,2), (2,3), (4,2)])\n assert_raises(nx.exception.NetworkXNoCycle,\n find_cycle, G, [0,1,2,3,4], orientation='original')", "metadata": "root.TestFindCycle.test_multidigraph_ignore2", "header": "['class', 'TestFindCycle', '(', 'object', ')', ':', '___EOS___']", "index": 199 } ]

[ { "span": "test_cycle_basis(", "start_line": 25, "start_column": 8, "end_line": 25, "end_column": 24 }, { "span": "test_multidigraph_ignore2(", "start_line": 192, "start_column": 8, "end_line": 192, "end_column": 33 } ]

[ { "span": "test_cycle_basis(", "start_line": 43, "start_column": 8, "end_line": 43, "end_column": 24 }, { "span": "test_multidigraph_ignore2(", "start_line": 199, "start_column": 8, "end_line": 199, "end_column": 33 } ]

1

true

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Unused local variable

django-import-export/django-import-export/tests/core/tests/resources_tests.py

[ { "content": " def test_link_to_nonexistent_field(self):\n with self.assertRaises(FieldDoesNotExist) as cm:\n class BrokenBook1(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('nonexistent__invalid',)\n self.assertEqual(\"Book.nonexistent: Book has no field named 'nonexistent'\",\n cm.exception.args[0])\n\n with self.assertRaises(FieldDoesNotExist) as cm:\n class BrokenBook2(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('author__nonexistent',)\n self.assertEqual(\"Book.author.nonexistent: Author has no field named \"\n \"'nonexistent'\", cm.exception.args[0])", "metadata": "root.ModelResourceTest.test_link_to_nonexistent_field", "header": "['class', 'ModelResourceTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 502 }, { "content": " def test_link_to_nonrelation_field(self):\n with self.assertRaises(KeyError) as cm:\n class BrokenBook1(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('published__invalid',)\n self.assertEqual(\"Book.published is not a relation\",\n cm.exception.args[0])\n\n with self.assertRaises(KeyError) as cm:\n class BrokenBook2(resources.ModelResource):\n class Meta:\n model = Book\n fields = ('author__name__invalid',)\n self.assertEqual(\"Book.author.name is not a relation\",\n cm.exception.args[0])", "metadata": "root.ModelResourceTest.test_link_to_nonrelation_field", "header": "['class', 'ModelResourceTest', '(', 'TestCase', ')', ':', '___EOS___']", "index": 519 } ]

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[]

1

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Except block handles 'BaseException'

GeoscienceAustralia/agdc/src/stacker.py

[ { "content": " def __init__(self, source_datacube=None, default_tile_type_id=1):\n \"\"\"Constructor\n Arguments:\n source_datacube: Optional DataCube object whose connection and data will be shared\n tile_type_id: Optional tile_type_id value (defaults to 1)\n \"\"\"\n \n if source_datacube:\n # Copy values from source_datacube and then override command line args\n self.__dict__ = copy(source_datacube.__dict__)\n \n args = self.parse_args()\n # Set instance attributes for every value in command line arguments file\n for attribute_name in args.__dict__.keys():\n attribute_value = args.__dict__[attribute_name]\n self.__setattr__(attribute_name, attribute_value)\n\n else:\n DataCube.__init__(self) # Call inherited constructor\n \n if self.debug:\n console_handler.setLevel(logging.DEBUG)\n \n # Attempt to parse dates from command line arguments or config file\n try:\n self.default_tile_type_id = int(self.default_tile_type_id) \n except:\n self.default_tile_type_id = default_tile_type_id # Use function argument value if not in command-line args\n try:\n self.start_date = datetime.strptime(self.start_date, '%Y%m%d').date()\n except:\n try:\n self.start_date = datetime.strptime(self.start_date, '%d/%m/%Y').date()\n except:\n self.start_date = None \n try:\n self.end_date = datetime.strptime(self.end_date, '%Y%m%d').date()\n except:\n try:\n self.end_date = datetime.strptime(self.end_date, '%d/%m/%Y').date()\n except:\n self.end_date= None \n try:\n self.x_index = int(self.x_index) \n except:\n self.x_index = None\n try:\n self.y_index = int(self.y_index) \n except:\n self.y_index = None\n\n # Path/Row values to permit single-scene stacking\n try:\n self.path = int(self.path) \n except:\n self.path = None\n try:\n self.row = int(self.row) \n except:\n self.row = None\n \n # Other variables set from config file only - not used\n try:\n self.min_path = int(self.min_path) \n except:\n self.min_path = None\n try:\n self.max_path = int(self.max_path) \n except:\n self.max_path = None\n try:\n self.min_row = int(self.min_row) \n except:\n self.min_row = None\n try:\n self.max_row = int(self.max_row) \n except:\n self.max_row = None\n\n # Create nested dict for given lookup_scheme_name with levels keyed by:\n # tile_type_id, satellite_tag, sensor_name, level_name, band_tag\n band_lookup = BandLookup(self) # Don't bother initialising it - we only want the lookup dict\n self.band_lookup_dict = band_lookup.band_lookup_dict[self.band_lookup_scheme]", "metadata": "root.Stacker.__init__", "header": "['class', 'Stacker', '(', 'DataCube', ')', ':', '___EOS___']", "index": 138 } ]

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[]

1

true

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Unused import

DexterInd/GrovePi/Projects/OLED_Weather Station/weather_station.py

[ { "content": "# Adapted from home_temp_hum_display.py\n'''\n\nThe MIT License (MIT)\n\nGrovePi for the Raspberry Pi: an open source platform for connecting Grove Sensors to the Raspberry Pi.\nCopyright (C) 2015 Dexter Industries\n\nPermission is hereby granted, free of charge, to any person obtaining a copy\nof this software and associated documentation files (the \"Software\"), to deal\nin the Software without restriction, including without limitation the rights\nto use, copy, modify, merge, publish, distribute, sublicense, and/or sell\ncopies of the Software, and to permit persons to whom the Software is\nfurnished to do so, subject to the following conditions:\n\nThe above copyright notice and this permission notice shall be included in\nall copies or substantial portions of the Software.\n\nTHE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\nIMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\nFITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE\nAUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\nLIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,\nOUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN\nTHE SOFTWARE.\n\n'''\n\nfrom grovepi import *\nfrom grove_oled import *\n\nimport threading\n\ndht_sensor_port = 7 # Connect the DHt sensor to port 7\n\n#Start and initialize the OLED\noled_init()\noled_clearDisplay()\noled_setNormalDisplay()\noled_setVerticalMode()\ntime.sleep(.1)\n\n\n\n\n\nwhile True:\n try:\n # Get the temperature and Humidity from the DHT sensor\n [temp, hum] = dht(dht_sensor_port, 1)\n print((\"Temp =\", temp, \"C\\tHumidity =\", hum, \"%\"))\n t = str(temp)\n h = str(hum)\n\n #outside_thread = threading.Thread(target=update_outside_weather)\n #outside_thread.start()\n\n oled_setTextXY(0, 1) # Print \"INSIDE\" at line 1\n oled_putString(\"INSIDE\")\n\n oled_setTextXY(2, 0) # Print \"TEMP\" and the temperature in line 3\n oled_putString(\"Temp:\")\n oled_putString(t + \"C\")\n\n oled_setTextXY(3, 0) # Print \"HUM :\" and the humidity in line 4\n oled_putString(\"Hum :\")\n oled_putString(h + \"%\")\n\n #outside_thread.join()\n update_outside_weather()\n\n except (IOError, TypeError, Exception) as e:\n print((\"Error:\" + str(e)))\n finally:\n #outside_thread.join()\n pass\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "def get_outside_weather(location='Bucharest,ro'):\n import pyowm # Do a 'sudo pip install pyowm' to get this module\n\n owm = pyowm.OWM()\n\n #forecast = owm.daily_forecast(location)\n\n observation = owm.weather_at_place(location)\n weather = observation.get_weather()\n\n return weather", "metadata": "root.get_outside_weather", "header": "['module', '___EOS___']", "index": 43 }, { "content": "def update_outside_weather():\n # This uses OpenWeatherMap via the PyOWM module;\n # pywom module needs to be installed via pip,\n # see https://github.com/csparpa/pyowm\n weather = get_outside_weather()\n # by default location is Bucharest,ro; change it to your own\n\n oled_setTextXY(5, 1)\n oled_putString(\"OUTSIDE\")\n\n oled_setTextXY(7, 0)\n oled_putString(\"Temp:\")\n oled_putString(str(weather.get_temperature(\"celsius\")['temp']) + \"C\")\n\n oled_setTextXY(8, 0)\n oled_putString(\"Hum :\")\n oled_putString(str(weather.get_humidity()) + \"%\")\n\n oled_setTextXY(9, 0)\n oled_putString(\"Rain:\")\n\n rain = weather.get_rain()\n if len(rain) > 0:\n pass\n else:\n oled_putString(\"0%\")\n\n print((\"Weather: \", weather.get_temperature(\"celsius\")))\n print((\"Humidity: \", weather.get_humidity()))", "metadata": "root.update_outside_weather", "header": "['module', '___EOS___']", "index": 56 } ]

[ { "span": "import threading", "start_line": 31, "start_column": 0, "end_line": 31, "end_column": 16 } ]

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Unused import

rlpy/rlpy/rlpy/__init__.py

[ { "content": "import rlpy.Agents\nimport rlpy.Tools\nimport rlpy.Domains\nimport rlpy.MDPSolvers\nimport rlpy.Experiments\nimport rlpy.Policies\nimport rlpy.Representations\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 } ]

[ { "span": "import rlpy.Agents", "start_line": 0, "start_column": 0, "end_line": 0, "end_column": 18 }, { "span": "import rlpy.Tools", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 17 }, { "span": "import rlpy.Domains", "start_line": 2, "start_column": 0, "end_line": 2, "end_column": 19 }, { "span": "import rlpy.MDPSolvers", "start_line": 3, "start_column": 0, "end_line": 3, "end_column": 22 }, { "span": "import rlpy.Experiments", "start_line": 4, "start_column": 0, "end_line": 4, "end_column": 23 }, { "span": "import rlpy.Policies", "start_line": 5, "start_column": 0, "end_line": 5, "end_column": 20 }, { "span": "import rlpy.Representations", "start_line": 6, "start_column": 0, "end_line": 6, "end_column": 27 } ]

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Unused import

sccn/SNAP/src/modules/Sample3.py

[ { "content": "from framework.latentmodule import LatentModule\nimport random\nimport time\n\n", "metadata": "root", "header": "['module', '___EOS___']", "index": 0 }, { "content": "class Main(LatentModule):\n", "metadata": "root.Main", "header": "['module', '___EOS___']", "index": 4 }, { "content": " def __init__(self):\n LatentModule.__init__(self)\n \n # set defaults for some configurable parameters:\n self.speed = 2", "metadata": "root.Main.__init__", "header": "['class', 'Main', '(', 'LatentModule', ')', ':', '___EOS___']", "index": 5 }, { "content": " def run(self):\n self.write('In the next part, please hit the A key whenever the ball hits the ground!\\nSpace when ready.','space')\n watcher = self.watchfor_multiple_begin(['a'])\n \n vel = [self.speed,0] # velocity\n pos = [-0.7,0.7] # position\n \n ball = self.picture('ball.png',duration=10000,scale=0.03,pos=pos,block=False)\n now = time.time()\n t_end = now + 20\n while True:\n # calc amount of time passed\n dt = time.time() - now \n now = time.time()\n if now > t_end:\n break\n \n # move the ball\n pos[0] += vel[0] * dt\n pos[1] += vel[1] * dt\n ball.setPos(pos[0],0,pos[1])\n # decelerate the ball and apply gravity\n vel[0] = vel[0]*0.98**dt\n vel[1] = vel[1]*0.98**dt - 2*dt\n # bounce\n if abs(pos[0]) > base.getAspectRatio():\n vel[0] = abs(vel[0]) * (-1 if pos[0]>0 else +1)\n if abs(pos[1]) > 1:\n vel[1] = abs(vel[1]) * (-1 if pos[1]>0 else +1)\n \n self.sleep(0.01)\n ball.destroy()\n \n results = self.watchfor_multiple_end(watcher)\n self.write('You pressed the A key at the following times:\\n%s\\n. Press space to end the experiment.' % str(results['a']),'space')\n self.write('You have successfully completed the experiment!')", "metadata": "root.Main.run", "header": "['class', 'Main', '(', 'LatentModule', ')', ':', '___EOS___']", "index": 11 } ]

[ { "span": "import random", "start_line": 1, "start_column": 0, "end_line": 1, "end_column": 13 } ]

[]

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