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Due to recent advances in synthetic biology and artificial life, the origin of life is currently a hot topic of research. We review the literature and argue that the two traditionally competing "replicator-first" and "metabolism-first" approaches are merging into one integrated theory of individuation and evolution. We contribute to the maturation of this more inclusive approach by highlighting some problematic assumptions that still lead to an impoverished conception of the phenomenon of life. In particular, we argue that the new consensus has so far failed to consider the relevance of intermediate timescales. We propose that an adequate theory of life must account for the fact that all living beings are situated in at least four distinct timescales, which are typically associated with metabolism, motility, development, and evolution. On this view, self-movement, adaptive behavior and morphological changes could have already been present at the origin of life. In order to illustrate this possibility we analyze a minimal model of life-like phenomena, namely of precarious, individuated, dissipative structures that can be found in simple reaction-diffusion systems. Based on our analysis we suggest that processes in intermediate timescales could have already been operative in prebiotic systems. They may have facilitated and constrained changes occurring in the faster- and slower-paced timescales of chemical self-individuation and evolution by natural selection, respectively.
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We investigated the possibility of using a machine-learning scheme in conjunction with commercial wearable EEG-devices for translating listener's subjective experience of music into scores that can be used for the automated annotation of music in popular on-demand streaming services. Based on the established -neuroscientifically sound- concepts of brainwave frequency bands, activation asymmetry index and cross-frequency-coupling (CFC), we introduce a Brain Computer Interface (BCI) system that automatically assigns a rating score to the listened song. Our research operated in two distinct stages: i) a generic feature engineering stage, in which features from signal-analytics were ranked and selected based on their ability to associate music induced perturbations in brainwaves with listener's appraisal of music. ii) a personalization stage, during which the efficiency of ex- treme learning machines (ELMs) is exploited so as to translate the derived pat- terns into a listener's score. Encouraging experimental results, from a pragmatic use of the system, are presented.
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In this meta-ethnography, we explore three different angles of ethical artificial intelligence (AI) design implementation including the philosophical ethical viewpoint, the technical perspective, and framing through a political lens. Our qualitative research includes a literature review that highlights the cross-referencing of these angles by discussing the value and drawbacks of contrastive top-down, bottom-up, and hybrid approaches previously published. The novel contribution to this framework is the political angle, which constitutes ethics in AI either being determined by corporations and governments and imposed through policies or law (coming from the top), or ethics being called for by the people (coming from the bottom), as well as top-down, bottom-up, and hybrid technicalities of how AI is developed within a moral construct and in consideration of its users, with expected and unexpected consequences and long-term impact in the world. There is a focus on reinforcement learning as an example of a bottom-up applied technical approach and AI ethics principles as a practical top-down approach. This investigation includes real-world case studies to impart a global perspective, as well as philosophical debate on the ethics of AI and theoretical future thought experimentation based on historical facts, current world circumstances, and possible ensuing realities.
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The technologies and algorithms are growing at an exponential rate. The technologies are capable enough to solve technically challenging and complex problems which seemed impossible task. However, the trending methods and approaches are facing multiple challenges on various fronts of data, algorithms, software, computational complexities, and energy efficiencies. Nature also faces similar challenges. Nature has solved those challenges and formulation of those are available as Nature Inspired Algorithms (NIA), which are derived based on the study of nature. A novel method based on TRIZ to map the real-world problems to nature problems is explained here.TRIZ is a Theory of inventive problem solving. Using the proposed framework, best NIA can be identified to solve the real-world problems. For this framework to work, a novel classification of NIA based on the end goal that nature is trying to achieve is devised. The application of the this framework along with examples is also discussed.
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Artificial Intelligence has looked into biological systems as a source of inspiration. Although there are many aspects of the brain yet to be discovered, neuroscience has found evidence that the connections between neurons continuously grow and reshape as a part of the learning process. This differs from the design of Artificial Neural Networks, that achieve learning by evolving the weights in the synapses between them and their topology stays unaltered through time. This project has explored rules for growing the connections between the neurons in Spiking Neural Networks as a learning mechanism. These rules have been implemented on a multi-agent system for creating simple logic functions, that establish a base for building up more complex systems and architectures. Results in a simulation environment showed that for a given set of parameters it is possible to reach topologies that reproduce the tested functions. This project also opens the door to the usage of techniques like genetic algorithms for obtaining the best suited values for the model parameters, and hence creating neural networks that can adapt to different functions.
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Traditionally, Deep Artificial Neural Networks (DNN's) are trained through gradient descent. Recent research shows that Deep Neuroevolution (DNE) is also capable of evolving multi-million-parameter DNN's, which proved to be particularly useful in the field of Reinforcement Learning (RL). This is mainly due to its excellent scalability and simplicity compared to the traditional MDP-based RL methods. So far, DNE has only been applied to complex single-agent problems. As evolutionary methods are a natural choice for multi-agent problems, the question arises whether DNE can also be applied in a complex multi-agent setting. In this paper, we describe and validate a new approach based on Coevolution. To validate our approach, we benchmark two Deep Coevolutionary Algorithms on a range of multi-agent Atari games and compare our results against the results of Ape-X DQN. Our results show that these Deep Coevolutionary algorithms (1) can be successfully trained to play various games, (2) outperform Ape-X DQN in some of them, and therefore (3) show that Coevolution can be a viable approach to solving complex multi-agent decision-making problems.
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We examine an evolutionary naming-game model where communicating agents are equipped with an evolutionarily selected learning ability. Such a coupling of biological and linguistic ingredients results in an abrupt transition: upon a small change of a model control parameter a poorly communicating group of linguistically unskilled agents transforms into almost perfectly communicating group with large learning abilities. When learning ability is kept fixed, the transition appears to be continuous. Genetic imprinting of the learning abilities proceeds via Baldwin effect: initially unskilled communicating agents learn a language and that creates a niche in which there is an evolutionary pressure for the increase of learning ability.Our model suggests that when linguistic (or cultural) processes became intensive enough, a transition took place where both linguistic performance and biological endowment of our species experienced an abrupt change that perhaps triggered the rapid expansion of human civilization.
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Interpersonal relations are fickle, with close friendships often dissolving into enmity. In this work, we explore linguistic cues that presage such transitions by studying dyadic interactions in an online strategy game where players form alliances and break those alliances through betrayal. We characterize friendships that are unlikely to last and examine temporal patterns that foretell betrayal. We reveal that subtle signs of imminent betrayal are encoded in the conversational patterns of the dyad, even if the victim is not aware of the relationship's fate. In particular, we find that lasting friendships exhibit a form of balance that manifests itself through language. In contrast, sudden changes in the balance of certain conversational attributes---such as positive sentiment, politeness, or focus on future planning---signal impending betrayal.
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Public debates are a common platform for presenting and juxtaposing diverging views on important issues. In this work we propose a methodology for tracking how ideas flow between participants throughout a debate. We use this approach in a case study of Oxford-style debates---a competitive format where the winner is determined by audience votes---and show how the outcome of a debate depends on aspects of conversational flow. In particular, we find that winners tend to make better use of a debate's interactive component than losers, by actively pursuing their opponents' points rather than promoting their own ideas over the course of the conversation.
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Existing neural conversational models process natural language primarily on a lexico-syntactic level, thereby ignoring one of the most crucial components of human-to-human dialogue: its affective content. We take a step in this direction by proposing three novel ways to incorporate affective/emotional aspects into long short term memory (LSTM) encoder-decoder neural conversation models: (1) affective word embeddings, which are cognitively engineered, (2) affect-based objective functions that augment the standard cross-entropy loss, and (3) affectively diverse beam search for decoding. Experiments show that these techniques improve the open-domain conversational prowess of encoder-decoder networks by enabling them to produce emotionally rich responses that are more interesting and natural.
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Questions play a prominent role in social interactions, performing rhetorical functions that go beyond that of simple informational exchange. The surface form of a question can signal the intention and background of the person asking it, as well as the nature of their relation with the interlocutor. While the informational nature of questions has been extensively examined in the context of question-answering applications, their rhetorical aspects have been largely understudied. In this work we introduce an unsupervised methodology for extracting surface motifs that recur in questions, and for grouping them according to their latent rhetorical role. By applying this framework to the setting of question sessions in the UK parliament, we show that the resulting typology encodes key aspects of the political discourse---such as the bifurcation in questioning behavior between government and opposition parties---and reveals new insights into the effects of a legislator's tenure and political career ambitions.
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The ever-growing datasets published on Linked Open Data mainly contain encyclopedic information. However, there is a lack of quality structured and semantically annotated datasets extracted from unstructured real-time sources. In this paper, we present principles for developing a knowledge graph of interlinked events using the case study of news headlines published on Twitter which is a real-time and eventful source of fresh information. We represent the essential pipeline containing the required tasks ranging from choosing background data model, event annotation (i.e., event recognition and classification), entity annotation and eventually interlinking events. The state-of-the-art is limited to domain-specific scenarios for recognizing and classifying events, whereas this paper plays the role of a domain-agnostic road-map for developing a knowledge graph of interlinked events.
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Multi-channel speech enhancement with ad-hoc sensors has been a challenging task. Speech model guided beamforming algorithms are able to recover natural sounding speech, but the speech models tend to be oversimplified or the inference would otherwise be too complicated. On the other hand, deep learning based enhancement approaches are able to learn complicated speech distributions and perform efficient inference, but they are unable to deal with variable number of input channels. Also, deep learning approaches introduce a lot of errors, particularly in the presence of unseen noise types and settings. We have therefore proposed an enhancement framework called DEEPBEAM, which combines the two complementary classes of algorithms. DEEPBEAM introduces a beamforming filter to produce natural sounding speech, but the filter coefficients are determined with the help of a monaural speech enhancement neural network. Experiments on synthetic and real-world data show that DEEPBEAM is able to produce clean, dry and natural sounding speech, and is robust against unseen noise.
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One of the main challenges online social systems face is the prevalence of antisocial behavior, such as harassment and personal attacks. In this work, we introduce the task of predicting from the very start of a conversation whether it will get out of hand. As opposed to detecting undesirable behavior after the fact, this task aims to enable early, actionable prediction at a time when the conversation might still be salvaged. To this end, we develop a framework for capturing pragmatic devices---such as politeness strategies and rhetorical prompts---used to start a conversation, and analyze their relation to its future trajectory. Applying this framework in a controlled setting, we demonstrate the feasibility of detecting early warning signs of antisocial behavior in online discussions.
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Social media platforms may provide potential space for discourses that contain hate speech, and even worse, can act as a propagation mechanism for hate crimes. The FBI's Uniform Crime Reporting (UCR) Program collects hate crime data and releases statistic report yearly. These statistics provide information in determining national hate crime trends. The statistics can also provide valuable holistic and strategic insight for law enforcement agencies or justify lawmakers for specific legislation. However, the reports are mostly released next year and lag behind many immediate needs. Recent research mainly focuses on hate speech detection in social media text or empirical studies on the impact of a confirmed crime. This paper proposes a framework that first utilizes text mining techniques to extract hate crime events from New York Times news, then uses the results to facilitate predicting American national-level and state-level hate crime trends. Experimental results show that our method can significantly enhance the prediction performance compared with time series or regression methods without event-related factors. Our framework broadens the methods of national-level and state-level hate crime trends prediction.
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Fighting the ongoing COVID-19 infodemic has been declared as one of the most important focus areas by the World Health Organization since the onset of the COVID-19 pandemic. While the information that is consumed and disseminated consists of promoting fake cures, rumors, and conspiracy theories to spreading xenophobia and panic, at the same time there is information (e.g., containing advice, promoting cure) that can help different stakeholders such as policy-makers. Social media platforms enable the infodemic and there has been an effort to curate the content on such platforms, analyze and debunk them. While a majority of the research efforts consider one or two aspects (e.g., detecting factuality) of such information, in this study we focus on a multifaceted approach, including an API,\url{https://app.swaggerhub.com/apis/yifan2019/Tanbih/0.8.0/} and a demo system,\url{https://covid19.tanbih.org}, which we made freely and publicly available. We believe that this will facilitate researchers and different stakeholders. A screencast of the API services and demo is available.\url{https://youtu.be/zhbcSvxEKMk}
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The last decade has witnessed a surge in the interaction of people through social networking platforms. While there are several positive aspects of these social platforms, the proliferation has led them to become the breeding ground for cyber-bullying and hate speech. Recent advances in NLP have often been used to mitigate the spread of such hateful content. Since the task of hate speech detection is usually applicable in the context of social networks, we introduce CRUSH, a framework for hate speech detection using user-anchored self-supervision and contextual regularization. Our proposed approach secures ~ 1-12% improvement in test set metrics over best performing previous approaches on two types of tasks and multiple popular english social media datasets.
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Affective responses to music are highly personal. Despite consensus that idiosyncratic factors play a key role in regulating how listeners emotionally respond to music, precisely measuring the marginal effects of these variables has proved challenging. To address this gap, we develop computational methods to measure affective responses to music from over 403M listener comments on a Chinese social music platform. Building on studies from music psychology in systematic and quasi-causal analyses, we test for musical, lyrical, contextual, demographic, and mental health effects that drive listener affective responses. Finally, motivated by the social phenomenon known as w\v{a}ng-y\`i-y\'un, we identify influencing factors of platform user self-disclosures, the social support they receive, and notable differences in discloser user activity.
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Various recent experimental results show that large language models (LLM) exhibit emergent abilities that are not present in small models. System performance is greatly improved after passing a certain critical threshold of scale. In this letter, we provide a simple explanation for such a phase transition phenomenon. For this, we model an LLM as a sequence-to-sequence random function. Instead of using instant generation at each step, we use a list decoder that keeps a list of candidate sequences at each step and defers the generation of the output sequence at the end. We show that there is a critical threshold such that the expected number of erroneous candidate sequences remains bounded when an LLM is below the threshold, and it grows exponentially when an LLM is above the threshold. Such a threshold is related to the basic reproduction number in a contagious disease.
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We present Text-to-OverpassQL, a task designed to facilitate a natural language interface for querying geodata from OpenStreetMap (OSM). The Overpass Query Language (OverpassQL) allows users to formulate complex database queries and is widely adopted in the OSM ecosystem. Generating Overpass queries from natural language input serves multiple use-cases. It enables novice users to utilize OverpassQL without prior knowledge, assists experienced users with crafting advanced queries, and enables tool-augmented large language models to access information stored in the OSM database. In order to assess the performance of current sequence generation models on this task, we propose OverpassNL, a dataset of 8,352 queries with corresponding natural language inputs. We further introduce task specific evaluation metrics and ground the evaluation of the Text-to-OverpassQL task by executing the queries against the OSM database. We establish strong baselines by finetuning sequence-to-sequence models and adapting large language models with in-context examples. The detailed evaluation reveals strengths and weaknesses of the considered learning strategies, laying the foundations for further research into the Text-to-OverpassQL task.
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We assess the ability of GPT -- a large language model -- to serve as a financial robo-advisor for the masses, by using a financial literacy test. Davinci and ChatGPT based on GPT-3.5 score 66% and 65% on the financial literacy test, respectively, compared to a baseline of 33%. However, ChatGPT based on GPT-4 achieves a near-perfect 99% score, pointing to financial literacy becoming an emergent ability of state-of-the-art models. We use the Judge-Advisor System and a savings dilemma to illustrate how researchers might assess advice-utilization from large language models. We also present a number of directions for future research.
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Historical emphasis on writing mastery has shifted with advances in generative AI, especially in scientific writing. This study analysed six AI chatbots for scholarly writing in humanities and archaeology. Using methods that assessed factual correctness and scientific contribution, ChatGPT-4 showed the highest quantitative accuracy, closely followed by ChatGPT-3.5, Bing, and Bard. However, Claude 2 and Aria scored considerably lower. Qualitatively, all AIs exhibited proficiency in merging existing knowledge, but none produced original scientific content. Inter-estingly, our findings suggest ChatGPT-4 might represent a plateau in large language model size. This research emphasizes the unique, intricate nature of human research, suggesting that AI's emulation of human originality in scientific writing is challenging. As of 2023, while AI has transformed content generation, it struggles with original contributions in humanities. This may change as AI chatbots continue to evolve into LLM-powered software.
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We introduce a new cross-modal fusion technique designed for generative error correction in automatic speech recognition (ASR). Our methodology leverages both acoustic information and external linguistic representations to generate accurate speech transcription contexts. This marks a step towards a fresh paradigm in generative error correction within the realm of n-best hypotheses. Unlike the existing ranking-based rescoring methods, our approach adeptly uses distinct initialization techniques and parameter-efficient algorithms to boost ASR performance derived from pre-trained speech and text models. Through evaluation across diverse ASR datasets, we evaluate the stability and reproducibility of our fusion technique, demonstrating its improved word error rate relative (WERR) performance in comparison to n-best hypotheses by relatively 37.66%. To encourage future research, we have made our code and pre-trained models open source at https://github.com/Srijith-rkr/Whispering-LLaMA.
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The Minimum Description Length (MDL) principle is solidly based on a provably ideal method of inference using Kolmogorov complexity. We test how the theory behaves in practice on a general problem in model selection: that of learning the best model granularity. The performance of a model depends critically on the granularity, for example the choice of precision of the parameters. Too high precision generally involves modeling of accidental noise and too low precision may lead to confusion of models that should be distinguished. This precision is often determined ad hoc. In MDL the best model is the one that most compresses a two-part code of the data set: this embodies ``Occam's Razor.'' In two quite different experimental settings the theoretical value determined using MDL coincides with the best value found experimentally. In the first experiment the task is to recognize isolated handwritten characters in one subject's handwriting, irrespective of size and orientation. Based on a new modification of elastic matching, using multiple prototypes per character, the optimal prediction rate is predicted for the learned parameter (length of sampling interval) considered most likely by MDL, which is shown to coincide with the best value found experimentally. In the second experiment the task is to model a robot arm with two degrees of freedom using a three layer feed-forward neural network where we need to determine the number of nodes in the hidden layer giving best modeling performance. The optimal model (the one that extrapolizes best on unseen examples) is predicted for the number of nodes in the hidden layer considered most likely by MDL, which again is found to coincide with the best value found experimentally.
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Gesture recognition is mainly apprehensive on analyzing the functionality of human wits. The main goal of gesture recognition is to create a system which can recognize specific human gestures and use them to convey information or for device control. Hand gestures provide a separate complementary modality to speech for expressing ones ideas. Information associated with hand gestures in a conversation is degree,discourse structure, spatial and temporal structure. The approaches present can be mainly divided into Data-Glove Based and Vision Based approaches. An important face feature point is the nose tip. Since nose is the highest protruding point from the face. Besides that, it is not affected by facial expressions.Another important function of the nose is that it is able to indicate the head pose. Knowledge of the nose location will enable us to align an unknown 3D face with those in a face database. Eye detection is divided into eye position detection and eye contour detection. Existing works in eye detection can be classified into two major categories: traditional image-based passive approaches and the active IR based approaches. The former uses intensity and shape of eyes for detection and the latter works on the assumption that eyes have a reflection under near IR illumination and produce bright/dark pupil effect. The traditional methods can be broadly classified into three categories: template based methods,appearance based methods and feature based methods. The purpose of this paper is to compare various human Gesture recognition systems for interfacing machines directly to human wits without any corporeal media in an ambient environment.
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Quantum information technologies, and intelligent learning systems, are both emergent technologies that will likely have a transforming impact on our society. The respective underlying fields of research -- quantum information (QI) versus machine learning (ML) and artificial intelligence (AI) -- have their own specific challenges, which have hitherto been investigated largely independently. However, in a growing body of recent work, researchers have been probing the question to what extent these fields can learn and benefit from each other. QML explores the interaction between quantum computing and ML, investigating how results and techniques from one field can be used to solve the problems of the other. Recently, we have witnessed breakthroughs in both directions of influence. For instance, quantum computing is finding a vital application in providing speed-ups in ML, critical in our "big data" world. Conversely, ML already permeates cutting-edge technologies, and may become instrumental in advanced quantum technologies. Aside from quantum speed-up in data analysis, or classical ML optimization used in quantum experiments, quantum enhancements have also been demonstrated for interactive learning, highlighting the potential of quantum-enhanced learning agents. Finally, works exploring the use of AI for the very design of quantum experiments, and for performing parts of genuine research autonomously, have reported their first successes. Beyond the topics of mutual enhancement, researchers have also broached the fundamental issue of quantum generalizations of ML/AI concepts. This deals with questions of the very meaning of learning and intelligence in a world that is described by quantum mechanics. In this review, we describe the main ideas, recent developments, and progress in a broad spectrum of research investigating machine learning and artificial intelligence in the quantum domain.
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We consider the case in which a robot has to navigate in an unknown environment but does not have enough on-board power or payload to carry a traditional depth sensor (e.g., a 3D lidar) and thus can only acquire a few (point-wise) depth measurements. We address the following question: is it possible to reconstruct the geometry of an unknown environment using sparse and incomplete depth measurements? Reconstruction from incomplete data is not possible in general, but when the robot operates in man-made environments, the depth exhibits some regularity (e.g., many planar surfaces with only a few edges); we leverage this regularity to infer depth from a small number of measurements. Our first contribution is a formulation of the depth reconstruction problem that bridges robot perception with the compressive sensing literature in signal processing. The second contribution includes a set of formal results that ascertain the exactness and stability of the depth reconstruction in 2D and 3D problems, and completely characterize the geometry of the profiles that we can reconstruct. Our third contribution is a set of practical algorithms for depth reconstruction: our formulation directly translates into algorithms for depth estimation based on convex programming. In real-world problems, these convex programs are very large and general-purpose solvers are relatively slow. For this reason, we discuss ad-hoc solvers that enable fast depth reconstruction in real problems. The last contribution is an extensive experimental evaluation in 2D and 3D problems, including Monte Carlo runs on simulated instances and testing on multiple real datasets. Empirical results confirm that the proposed approach ensures accurate depth reconstruction, outperforms interpolation-based strategies, and performs well even when the assumption of structured environment is violated.
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The 11th Summer Workshop on Multimodal Interfaces eNTERFACE 2015 was hosted by the Numediart Institute of Creative Technologies of the University of Mons from August 10th to September 2015. During the four weeks, students and researchers from all over the world came together in the Numediart Institute of the University of Mons to work on eight selected projects structured around intelligent interfaces. Eight projects were selected and their reports are shown here.
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Currently, many critical care indices are repetitively assessed and recorded by overburdened nurses, e.g. physical function or facial pain expressions of nonverbal patients. In addition, many essential information on patients and their environment are not captured at all, or are captured in a non-granular manner, e.g. sleep disturbance factors such as bright light, loud background noise, or excessive visitations. In this pilot study, we examined the feasibility of using pervasive sensing technology and artificial intelligence for autonomous and granular monitoring of critically ill patients and their environment in the Intensive Care Unit (ICU). As an exemplar prevalent condition, we also characterized delirious and non-delirious patients and their environment. We used wearable sensors, light and sound sensors, and a high-resolution camera to collected data on patients and their environment. We analyzed collected data using deep learning and statistical analysis. Our system performed face detection, face recognition, facial action unit detection, head pose detection, facial expression recognition, posture recognition, actigraphy analysis, sound pressure and light level detection, and visitation frequency detection. We were able to detect patient's face (Mean average precision (mAP)=0.94), recognize patient's face (mAP=0.80), and their postures (F1=0.94). We also found that all facial expressions, 11 activity features, visitation frequency during the day, visitation frequency during the night, light levels, and sound pressure levels during the night were significantly different between delirious and non-delirious patients (p-value<0.05). In summary, we showed that granular and autonomous monitoring of critically ill patients and their environment is feasible and can be used for characterizing critical care conditions and related environment factors.
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Tumor segmentation in oncological PET is challenging, a major reason being the partial-volume effects that arise due to low system resolution and finite voxel size. The latter results in tissue-fraction effects, i.e. voxels contain a mixture of tissue classes. Conventional segmentation methods are typically designed to assign each voxel in the image as belonging to a certain tissue class. Thus, these methods are inherently limited in modeling tissue-fraction effects. To address the challenge of accounting for partial-volume effects, and in particular, tissue-fraction effects, we propose a Bayesian approach to tissue-fraction estimation for oncological PET segmentation. Specifically, this Bayesian approach estimates the posterior mean of fractional volume that the tumor occupies within each voxel of the image. The proposed method, implemented using a deep-learning-based technique, was first evaluated using clinically realistic 2-D simulation studies with known ground truth, in the context of segmenting the primary tumor in PET images of patients with lung cancer. The evaluation studies demonstrated that the method accurately estimated the tumor-fraction areas and significantly outperformed widely used conventional PET segmentation methods, including a U-net-based method, on the task of segmenting the tumor. In addition, the proposed method was relatively insensitive to partial-volume effects and yielded reliable tumor segmentation for different clinical-scanner configurations. The method was then evaluated using clinical images of patients with stage IIB/III non-small cell lung cancer from ACRIN 6668/RTOG 0235 multi-center clinical trial. Here, the results showed that the proposed method significantly outperformed all other considered methods and yielded accurate tumor segmentation on patient images with Dice similarity coefficient (DSC) of 0.82 (95 % CI: [0.78, 0.86]).
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This study evaluated generative methods to potentially mitigate AI bias when diagnosing diabetic retinopathy (DR) resulting from training data imbalance, or domain generalization which occurs when deep learning systems (DLS) face concepts at test/inference time they were not initially trained on. The public domain Kaggle-EyePACS dataset (88,692 fundi and 44,346 individuals, originally diverse for ethnicity) was modified by adding clinician-annotated labels and constructing an artificial scenario of data imbalance and domain generalization by disallowing training (but not testing) exemplars for images of retinas with DR warranting referral (DR-referable) and from darker-skin individuals, who presumably have greater concentration of melanin within uveal melanocytes, on average, contributing to retinal image pigmentation. A traditional/baseline diagnostic DLS was compared against new DLSs that would use training data augmented via generative models for debiasing. Accuracy (95% confidence intervals [CI]) of the baseline diagnostics DLS for fundus images of lighter-skin individuals was 73.0% (66.9%, 79.2%) vs. darker-skin of 60.5% (53.5%, 67.3%), demonstrating bias/disparity (delta=12.5%) (Welch t-test t=2.670, P=.008) in AI performance across protected subpopulations. Using novel generative methods for addressing missing subpopulation training data (DR-referable darker-skin) achieved instead accuracy, for lighter-skin, of 72.0% (65.8%, 78.2%), and for darker-skin, of 71.5% (65.2%,77.8%), demonstrating closer parity (delta=0.5%) in accuracy across subpopulations (Welch t-test t=0.111, P=.912). Findings illustrate how data imbalance and domain generalization can lead to disparity of accuracy across subpopulations, and show that novel generative methods of synthetic fundus images may play a role for debiasing AI.
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A core problem in cognitive science and machine learning is to understand how humans derive semantic representations from perceptual objects, such as color from an apple, pleasantness from a musical chord, or seriousness from a face. Markov Chain Monte Carlo with People (MCMCP) is a prominent method for studying such representations, in which participants are presented with binary choice trials constructed such that the decisions follow a Markov Chain Monte Carlo acceptance rule. However, while MCMCP has strong asymptotic properties, its binary choice paradigm generates relatively little information per trial, and its local proposal function makes it slow to explore the parameter space and find the modes of the distribution. Here we therefore generalize MCMCP to a continuous-sampling paradigm, where in each iteration the participant uses a slider to continuously manipulate a single stimulus dimension to optimize a given criterion such as 'pleasantness'. We formulate both methods from a utility-theory perspective, and show that the new method can be interpreted as 'Gibbs Sampling with People' (GSP). Further, we introduce an aggregation parameter to the transition step, and show that this parameter can be manipulated to flexibly shift between Gibbs sampling and deterministic optimization. In an initial study, we show GSP clearly outperforming MCMCP; we then show that GSP provides novel and interpretable results in three other domains, namely musical chords, vocal emotions, and faces. We validate these results through large-scale perceptual rating experiments. The final experiments use GSP to navigate the latent space of a state-of-the-art image synthesis network (StyleGAN), a promising approach for applying GSP to high-dimensional perceptual spaces. We conclude by discussing future cognitive applications and ethical implications.
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Our objective is to show the feasibility of using simulated mammograms to detect mammographically-occult (MO) cancer in women with dense breasts and a normal screening mammogram who could be triaged for additional screening with magnetic resonance imaging (MRI) or ultrasound. We developed a Conditional Generative Adversarial Network (CGAN) to simulate a mammogram with normal appearance using the opposite mammogram as the condition. We used a Convolutional Neural Network (CNN) trained on Radon Cumulative Distribution Transform (RCDT) processed mammograms to detect MO cancer. For training CGAN, we used screening mammograms of 1366 women. For MO cancer detection, we used screening mammograms of 333 women (97 MO cancer) with dense breasts. We simulated the right mammogram for normal controls and the cancer side for MO cancer cases. We created two RCDT images, one from a real mammogram pair and another from a real-simulated mammogram pair. We finetuned a VGG16 on resulting RCDT images to classify the women with MO cancer. We compared the classification performance of the CNN trained on fused RCDT images, CNN_{Fused} to that of trained only on real RCDT images, CNN_{Real}, and to that of trained only on simulated RCDT images, CNN_{Simulated}. The test AUC for CNN_{Fused} was 0.77 with a 95% confidence interval (95CI) of [0.71, 0.83], which was statistically better (p-value < 0.02) than the CNN_{Real} AUC of 0.70 with a 95CI of [0.64, 0.77] and CNN_{Simulated} AUC of 0.68 with a 95CI of [0.62, 0.75]. It showed that CGAN simulated mammograms can help MO cancer detection.
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Advanced attack campaigns span across multiple stages and stay stealthy for long time periods. There is a growing trend of attackers using off-the-shelf tools and pre-installed system applications (such as \emph{powershell} and \emph{wmic}) to evade the detection because the same tools are also used by system administrators and security analysts for legitimate purposes for their routine tasks. To start investigations, event logs can be collected from operational systems; however, these logs are generic enough and it often becomes impossible to attribute a potential attack to a specific attack group. Recent approaches in the literature have used anomaly detection techniques, which aim at distinguishing between malicious and normal behavior of computers or network systems. Unfortunately, anomaly detection systems based on point anomalies are too rigid in a sense that they could miss the malicious activity and classify the attack, not an outlier. Therefore, there is a research challenge to make better detection of malicious activities. To address this challenge, in this paper, we leverage Group Anomaly Detection (GAD), which detects anomalous collections of individual data points. Our approach is to build a neural network model utilizing Adversarial Autoencoder (AAE-$\alpha$) in order to detect the activity of an attacker who leverages off-the-shelf tools and system applications. In addition, we also build \textit{Behavior2Vec} and \textit{Command2Vec} sentence embedding deep learning models specific for feature extraction tasks. We conduct extensive experiments to evaluate our models on real-world datasets collected for a period of two months. The empirical results demonstrate that our approach is effective and robust in discovering targeted attacks, pen-tests, and attack campaigns leveraging custom tools.
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Convolutional Neural Networks (CNNs) achieve excellent computer-assisted diagnosis with sufficient annotated training data. However, most medical imaging datasets are small and fragmented. In this context, Generative Adversarial Networks (GANs) can synthesize realistic/diverse additional training images to fill the data lack in the real image distribution; researchers have improved classification by augmenting data with noise-to-image (e.g., random noise samples to diverse pathological images) or image-to-image GANs (e.g., a benign image to a malignant one). Yet, no research has reported results combining noise-to-image and image-to-image GANs for further performance boost. Therefore, to maximize the DA effect with the GAN combinations, we propose a two-step GAN-based DA that generates and refines brain Magnetic Resonance (MR) images with/without tumors separately: (i) Progressive Growing of GANs (PGGANs), multi-stage noise-to-image GAN for high-resolution MR image generation, first generates realistic/diverse 256 X 256 images; (ii) Multimodal UNsupervised Image-to-image Translation (MUNIT) that combines GANs/Variational AutoEncoders or SimGAN that uses a DA-focused GAN loss, further refines the texture/shape of the PGGAN-generated images similarly to the real ones. We thoroughly investigate CNN-based tumor classification results, also considering the influence of pre-training on ImageNet and discarding weird-looking GAN-generated images. The results show that, when combined with classic DA, our two-step GAN-based DA can significantly outperform the classic DA alone, in tumor detection (i.e., boosting sensitivity 93.67% to 97.48%) and also in other medical imaging tasks.
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As artificial intelligence and machine learning algorithms make further inroads into society, calls are increasing from multiple stakeholders for these algorithms to explain their outputs. At the same time, these stakeholders, whether they be affected citizens, government regulators, domain experts, or system developers, present different requirements for explanations. Toward addressing these needs, we introduce AI Explainability 360 (http://aix360.mybluemix.net/), an open-source software toolkit featuring eight diverse and state-of-the-art explainability methods and two evaluation metrics. Equally important, we provide a taxonomy to help entities requiring explanations to navigate the space of explanation methods, not only those in the toolkit but also in the broader literature on explainability. For data scientists and other users of the toolkit, we have implemented an extensible software architecture that organizes methods according to their place in the AI modeling pipeline. We also discuss enhancements to bring research innovations closer to consumers of explanations, ranging from simplified, more accessible versions of algorithms, to tutorials and an interactive web demo to introduce AI explainability to different audiences and application domains. Together, our toolkit and taxonomy can help identify gaps where more explainability methods are needed and provide a platform to incorporate them as they are developed.
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To interact with humans in collaborative environments, machines need to be able to predict (i.e., anticipate) future events, and execute actions in a timely manner. However, the observation of the human limb movements may not be sufficient to anticipate their actions unambiguously. In this work, we consider two additional sources of information (i.e., context) over time, gaze, movement and object information, and study how these additional contextual cues improve the action anticipation performance. We address action anticipation as a classification task, where the model takes the available information as the input and predicts the most likely action. We propose to use the uncertainty about each prediction as an online decision-making criterion for action anticipation. Uncertainty is modeled as a stochastic process applied to a time-based neural network architecture, which improves the conventional class-likelihood (i.e., deterministic) criterion. The main contributions of this paper are four-fold: (i) We propose a novel and effective decision-making criterion that can be used to anticipate actions even in situations of high ambiguity; (ii) we propose a deep architecture that outperforms previous results in the action anticipation task when using the Acticipate collaborative dataset; (iii) we show that contextual information is important to disambiguate the interpretation of similar actions; and (iv) we also provide a formal description of three existing performance metrics that can be easily used to evaluate action anticipation models.Our results on the Acticipate dataset showed the importance of contextual information and the uncertainty criterion for action anticipation. We achieve an average accuracy of 98.75% in the anticipation task using only an average of 25% of observations.
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Sequential pulling policies to flatten and smooth fabrics have applications from surgery to manufacturing to home tasks such as bed making and folding clothes. Due to the complexity of fabric states and dynamics, we apply deep imitation learning to learn policies that, given color (RGB), depth (D), or combined color-depth (RGBD) images of a rectangular fabric sample, estimate pick points and pull vectors to spread the fabric to maximize coverage. To generate data, we develop a fabric simulator and an algorithmic supervisor that has access to complete state information. We train policies in simulation using domain randomization and dataset aggregation (DAgger) on three tiers of difficulty in the initial randomized configuration. We present results comparing five baseline policies to learned policies and report systematic comparisons of RGB vs D vs RGBD images as inputs. In simulation, learned policies achieve comparable or superior performance to analytic baselines. In 180 physical experiments with the da Vinci Research Kit (dVRK) surgical robot, RGBD policies trained in simulation attain coverage of 83% to 95% depending on difficulty tier, suggesting that effective fabric smoothing policies can be learned from an algorithmic supervisor and that depth sensing is a valuable addition to color alone. Supplementary material is available at https://sites.google.com/view/fabric-smoothing.
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Deep neural networks (DNN) have shown great success in many computer vision applications. However, they are also known to be susceptible to backdoor attacks. When conducting backdoor attacks, most of the existing approaches assume that the targeted DNN is always available, and an attacker can always inject a specific pattern to the training data to further fine-tune the DNN model. However, in practice, such attack may not be feasible as the DNN model is encrypted and only available to the secure enclave. In this paper, we propose a novel black-box backdoor attack technique on face recognition systems, which can be conducted without the knowledge of the targeted DNN model. To be specific, we propose a backdoor attack with a novel color stripe pattern trigger, which can be generated by modulating LED in a specialized waveform. We also use an evolutionary computing strategy to optimize the waveform for backdoor attack. Our backdoor attack can be conducted in a very mild condition: 1) the adversary cannot manipulate the input in an unnatural way (e.g., injecting adversarial noise); 2) the adversary cannot access the training database; 3) the adversary has no knowledge of the training model as well as the training set used by the victim party. We show that the backdoor trigger can be quite effective, where the attack success rate can be up to $88\%$ based on our simulation study and up to $40\%$ based on our physical-domain study by considering the task of face recognition and verification based on at most three-time attempts during authentication. Finally, we evaluate several state-of-the-art potential defenses towards backdoor attacks, and find that our attack can still be effective. We highlight that our study revealed a new physical backdoor attack, which calls for the attention of the security issue of the existing face recognition/verification techniques.
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Autonomous navigation consists in an agent being able to navigate without human intervention or supervision, it affects both high level planning and low level control. Navigation is at the crossroad of multiple disciplines, it combines notions of computer vision, robotics and control. This work aimed at creating, in a simulation, a navigation pipeline whose transfer to the real world could be done with as few efforts as possible. Given the limited time and the wide range of problematic to be tackled, absolute navigation performances while important was not the main objective. The emphasis was rather put on studying the sim2real gap which is one the major bottlenecks of modern robotics and autonomous navigation. To design the navigation pipeline four main challenges arise; environment, localization, navigation and planning. The iGibson simulator is picked for its photo-realistic textures and physics engine. A topological approach to tackle space representation was picked over metric approaches because they generalize better to new environments and are less sensitive to change of conditions. The navigation pipeline is decomposed as a localization module, a planning module and a local navigation module. These modules utilize three different networks, an image representation extractor, a passage detector and a local policy. The laters are trained on specifically tailored tasks with some associated datasets created for those specific tasks. Localization is the ability for the agent to localize itself against a specific space representation. It must be reliable, repeatable and robust to a wide variety of transformations. Localization is tackled as an image retrieval task using a deep neural network trained on an auxiliary task as a feature descriptor extractor. The local policy is trained with behavioral cloning from expert trajectories gathered with ROS navigation stack.
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We present iGibson 1.0, a novel simulation environment to develop robotic solutions for interactive tasks in large-scale realistic scenes. Our environment contains 15 fully interactive home-sized scenes with 108 rooms populated with rigid and articulated objects. The scenes are replicas of real-world homes, with distribution and the layout of objects aligned to those of the real world. iGibson 1.0 integrates several key features to facilitate the study of interactive tasks: i) generation of high-quality virtual sensor signals (RGB, depth, segmentation, LiDAR, flow and so on), ii) domain randomization to change the materials of the objects (both visual and physical) and/or their shapes, iii) integrated sampling-based motion planners to generate collision-free trajectories for robot bases and arms, and iv) intuitive human-iGibson interface that enables efficient collection of human demonstrations. Through experiments, we show that the full interactivity of the scenes enables agents to learn useful visual representations that accelerate the training of downstream manipulation tasks. We also show that iGibson 1.0 features enable the generalization of navigation agents, and that the human-iGibson interface and integrated motion planners facilitate efficient imitation learning of human demonstrated (mobile) manipulation behaviors. iGibson 1.0 is open-source, equipped with comprehensive examples and documentation. For more information, visit our project website: http://svl.stanford.edu/igibson/
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Artificial intelligence (AI) systems struggle to generalize beyond their training data and abstract general properties from the specifics of the training examples. We propose a model that reproduces the apparent human ability to come up with a number sense through unsupervised everyday experience. The ability to understand and manipulate numbers and quantities emerges during childhood, but the mechanism through which humans acquire and develop this ability is still poorly understood. In particular, it is not known whether acquiring such a number sense is possible without supervision from a teacher. We explore this question through a model, assuming that the learner is able to pick and place small objects and will spontaneously engage in undirected manipulation. We assume that the learner's visual system will monitor the changing arrangements of objects in the scene and will learn to predict the effects of each action by comparing perception with the efferent signal of the motor system. We model perception using standard deep networks for feature extraction and classification. We find that, from learning the unrelated task of action prediction, an unexpected image representation emerges exhibiting regularities that foreshadow the perception and representation of numbers. These include distinct categories for the first few natural numbers, a strict ordering of the numbers, and a one-dimensional signal that correlates with numerical quantity. As a result, our model acquires the ability to estimate numerosity and subitize. Remarkably, subitization and numerosity estimation extrapolate to scenes containing many objects, far beyond the three objects used during training. We conclude that important aspects of a facility with numbers and quantities may be learned without teacher supervision.
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In deformable registration, the geometric framework - large deformation diffeomorphic metric mapping or LDDMM, in short - has inspired numerous techniques for comparing, deforming, averaging and analyzing shapes or images. Grounded in flows, which are akin to the equations of motion used in fluid dynamics, LDDMM algorithms solve the flow equation in the space of plausible deformations, i.e. diffeomorphisms. In this work, we make use of deep residual neural networks to solve the non-stationary ODE (flow equation) based on a Euler's discretization scheme. The central idea is to represent time-dependent velocity fields as fully connected ReLU neural networks (building blocks) and derive optimal weights by minimizing a regularized loss function. Computing minimizing paths between deformations, thus between shapes, turns to find optimal network parameters by back-propagating over the intermediate building blocks. Geometrically, at each time step, ResNet-LDDMM searches for an optimal partition of the space into multiple polytopes, and then computes optimal velocity vectors as affine transformations on each of these polytopes. As a result, different parts of the shape, even if they are close (such as two fingers of a hand), can be made to belong to different polytopes, and therefore be moved in different directions without costing too much energy. Importantly, we show how diffeomorphic transformations, or more precisely bilipshitz transformations, are predicted by our algorithm. We illustrate these ideas on diverse registration problems of 3D shapes under complex topology-preserving transformations. We thus provide essential foundations for more advanced shape variability analysis under a novel joint geometric-neural networks Riemannian-like framework, i.e. ResNet-LDDMM.
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With the advance in user-friendly and powerful video editing tools, anyone can easily manipulate videos without leaving prominent visual traces. Frame-rate up-conversion (FRUC), a representative temporal-domain operation, increases the motion continuity of videos with a lower frame-rate and is used by malicious counterfeiters in video tampering such as generating fake frame-rate video without improving the quality or mixing temporally spliced videos. FRUC is based on frame interpolation schemes and subtle artifacts that remain in interpolated frames are often difficult to distinguish. Hence, detecting such forgery traces is a critical issue in video forensics. This paper proposes a frame-rate conversion detection network (FCDNet) that learns forensic features caused by FRUC in an end-to-end fashion. The proposed network uses a stack of consecutive frames as the input and effectively learns interpolation artifacts using network blocks to learn spatiotemporal features. This study is the first attempt to apply a neural network to the detection of FRUC. Moreover, it can cover the following three types of frame interpolation schemes: nearest neighbor interpolation, bilinear interpolation, and motion-compensated interpolation. In contrast to existing methods that exploit all frames to verify integrity, the proposed approach achieves a high detection speed because it observes only six frames to test its authenticity. Extensive experiments were conducted with conventional forensic methods and neural networks for video forensic tasks to validate our research. The proposed network achieved state-of-the-art performance in terms of detecting the interpolated artifacts of FRUC. The experimental results also demonstrate that our trained model is robust for an unseen dataset, unlearned frame-rate, and unlearned quality factor.
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Plot-based Graphic API recommendation (Plot2API) is an unstudied but meaningful issue, which has several important applications in the context of software engineering and data visualization, such as the plotting guidance of the beginner, graphic API correlation analysis, and code conversion for plotting. Plot2API is a very challenging task, since each plot is often associated with multiple APIs and the appearances of the graphics drawn by the same API can be extremely varied due to the different settings of the parameters. Additionally, the samples of different APIs also suffer from extremely imbalanced. Considering the lack of technologies in Plot2API, we present a novel deep multi-task learning approach named Semantic Parsing Guided Neural Network (SPGNN) which translates the Plot2API issue as a multi-label image classification and an image semantic parsing tasks for the solution. In SPGNN, the recently advanced Convolutional Neural Network (CNN) named EfficientNet is employed as the backbone network for API recommendation. Meanwhile, a semantic parsing module is complemented to exploit the semantic relevant visual information in feature learning and eliminate the appearance-relevant visual information which may confuse the visual-information-based API recommendation. Moreover, the recent data augmentation technique named random erasing is also applied for alleviating the imbalance of API categories. We collect plots with the graphic APIs used to drawn them from Stack Overflow, and release three new Plot2API datasets corresponding to the graphic APIs of R and Python programming languages for evaluating the effectiveness of Plot2API techniques. Extensive experimental results not only demonstrate the superiority of our method over the recent deep learning baselines but also show the practicability of our method in the recommendation of graphic APIs.
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Understanding the reasons behind the predictions made by deep neural networks is critical for gaining human trust in many important applications, which is reflected in the increasing demand for explainability in AI (XAI) in recent years. Saliency-based feature attribution methods, which highlight important parts of images that contribute to decisions by classifiers, are often used as XAI methods, especially in the field of computer vision. In order to compare various saliency-based XAI methods quantitatively, several approaches for automated evaluation schemes have been proposed; however, there is no guarantee that such automated evaluation metrics correctly evaluate explainability, and a high rating by an automated evaluation scheme does not necessarily mean a high explainability for humans. In this study, instead of the automated evaluation, we propose a new human-based evaluation scheme using crowdsourcing to evaluate XAI methods. Our method is inspired by a human computation game, "Peek-a-boom", and can efficiently compare different XAI methods by exploiting the power of crowds. We evaluate the saliency maps of various XAI methods on two datasets with automated and crowd-based evaluation schemes. Our experiments show that the result of our crowd-based evaluation scheme is different from those of automated evaluation schemes. In addition, we regard the crowd-based evaluation results as ground truths and provide a quantitative performance measure to compare different automated evaluation schemes. We also discuss the impact of crowd workers on the results and show that the varying ability of crowd workers does not significantly impact the results.
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Positron Emission Tomography (PET) is an important tool for studying Alzheimer's disease (AD). PET scans can be used as diagnostics tools, and to provide molecular characterization of patients with cognitive disorders. However, multiple tracers are needed to measure glucose metabolism (18F-FDG), synaptic vesicle protein (11C-UCB-J), and $\beta$-amyloid (11C-PiB). Administering multiple tracers to patient will lead to high radiation dose and cost. In addition, access to PET scans using new or less-available tracers with sophisticated production methods and short half-life isotopes may be very limited. Thus, it is desirable to develop an efficient multi-tracer PET synthesis model that can generate multi-tracer PET from single-tracer PET. Previous works on medical image synthesis focus on one-to-one fixed domain translations, and cannot simultaneously learn the feature from multi-tracer domains. Given 3 or more tracers, relying on previous methods will also create a heavy burden on the number of models to be trained. To tackle these issues, we propose a 3D unified anatomy-aware cyclic adversarial network (UCAN) for translating multi-tracer PET volumes with one unified generative model, where MR with anatomical information is incorporated. Evaluations on a multi-tracer PET dataset demonstrate the feasibility that our UCAN can generate high-quality multi-tracer PET volumes, with NMSE less than 15% for all PET tracers.
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For people who ardently love painting but unfortunately have visual impairments, holding a paintbrush to create a work is a very difficult task. People in this special group are eager to pick up the paintbrush, like Leonardo da Vinci, to create and make full use of their own talents. Therefore, to maximally bridge this gap, we propose a painting navigation system to assist blind people in painting and artistic creation. The proposed system is composed of cognitive system and guidance system. The system adopts drawing board positioning based on QR code, brush navigation based on target detection and bush real-time positioning. Meanwhile, this paper uses human-computer interaction on the basis of voice and a simple but efficient position information coding rule. In addition, we design a criterion to efficiently judge whether the brush reaches the target or not. According to the experimental results, the thermal curves extracted from the faces of testers show that it is relatively well accepted by blindfolded and even blind testers. With the prompt frequency of 1s, the painting navigation system performs best with the completion degree of 89% with SD of 8.37% and overflow degree of 347% with SD of 162.14%. Meanwhile, the excellent and good types of brush tip trajectory account for 74%, and the relative movement distance is 4.21 with SD of 2.51. This work demonstrates that it is practicable for the blind people to feel the world through the brush in their hands. In the future, we plan to deploy Angle's Eyes on the phone to make it more portable. The demo video of the proposed painting navigation system is available at: https://doi.org/10.6084/m9.figshare.9760004.v1.
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The capability of a mobile robot to efficiently and safely perform complex missions is limited by its knowledge of the environment, namely the situation. Advanced reasoning, decision-making, and execution skills enable an intelligent agent to act autonomously in unknown environments. Situational Awareness (SA) is a fundamental capability of humans that has been deeply studied in various fields, such as psychology, military, aerospace, and education. Nevertheless, it has yet to be considered in robotics, which has focused on single compartmentalized concepts such as sensing, spatial perception, sensor fusion, state estimation, and Simultaneous Localization and Mapping (SLAM). Hence, the present research aims to connect the broad multidisciplinary existing knowledge to pave the way for a complete SA system for mobile robotics that we deem paramount for autonomy. To this aim, we define the principal components to structure a robotic SA and their area of competence. Accordingly, this paper investigates each aspect of SA, surveying the state-of-the-art robotics algorithms that cover them, and discusses their current limitations. Remarkably, essential aspects of SA are still immature since the current algorithmic development restricts their performance to only specific environments. Nevertheless, Artificial Intelligence (AI), particularly Deep Learning (DL), has brought new methods to bridge the gap that maintains these fields apart from the deployment to real-world scenarios. Furthermore, an opportunity has been discovered to interconnect the vastly fragmented space of robotic comprehension algorithms through the mechanism of Situational Graph (S-Graph), a generalization of the well-known scene graph. Therefore, we finally shape our vision for the future of robotic Situational Awareness by discussing interesting recent research directions.
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Depth estimation-based obstacle avoidance has been widely adopted by autonomous systems (drones and vehicles) for safety purpose. It normally relies on a stereo camera to automatically detect obstacles and make flying/driving decisions, e.g., stopping several meters ahead of the obstacle in the path or moving away from the detected obstacle. In this paper, we explore new security risks associated with the stereo vision-based depth estimation algorithms used for obstacle avoidance. By exploiting the weaknesses of the stereo matching in depth estimation algorithms and the lens flare effect in optical imaging, we propose DoubleStar, a long-range attack that injects fake obstacle depth by projecting pure light from two complementary light sources. DoubleStar includes two distinctive attack formats: beams attack and orbs attack, which leverage projected light beams and lens flare orbs respectively to cause false depth perception. We successfully attack two commercial stereo cameras designed for autonomous systems (ZED and Intel RealSense). The visualization of fake depth perceived by the stereo cameras illustrates the false stereo matching induced by DoubleStar. We further use Ardupilot to simulate the attack and demonstrate its impact on drones. To validate the attack on real systems, we perform a real-world attack towards a commercial drone equipped with state-of-the-art obstacle avoidance algorithms. Our attack can continuously bring a flying drone to a sudden stop or drift it away across a long distance under various lighting conditions, even bypassing sensor fusion mechanisms. Specifically, our experimental results show that DoubleStar creates fake depth up to 15 meters in distance at night and up to 8 meters during the daytime. To mitigate this newly discovered threat, we provide discussions on potential countermeasures to defend against DoubleStar.
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The prevalence of diabetic retinopathy (DR) has reached 34.6% worldwide and is a major cause of blindness among middle-aged diabetic patients. Regular DR screening using fundus photography helps detect its complications and prevent its progression to advanced levels. As manual screening is time-consuming and subjective, machine learning (ML) and deep learning (DL) have been employed to aid graders. However, the existing CNN-based methods use either pre-trained CNN models or a brute force approach to design new CNN models, which are not customized to the complexity of fundus images. To overcome this issue, we introduce an approach for custom-design of CNN models, whose architectures are adapted to the structural patterns of fundus images and better represent the DR-relevant features. It takes the leverage of k-medoid clustering, principal component analysis (PCA), and inter-class and intra-class variations to automatically determine the depth and width of a CNN model. The designed models are lightweight, adapted to the internal structures of fundus images, and encode the discriminative patterns of DR lesions. The technique is validated on a local dataset from King Saud University Medical City, Saudi Arabia, and two challenging benchmark datasets from Kaggle: EyePACS and APTOS2019. The custom-designed models outperform the famous pre-trained CNN models like ResNet152, Densnet121, and ResNeSt50 with a significant decrease in the number of parameters and compete well with the state-of-the-art CNN-based DR screening methods. The proposed approach is helpful for DR screening under diverse clinical settings and referring the patients who may need further assessment and treatment to expert ophthalmologists.
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Background & Aims: Hepatic steatosis is a major cause of chronic liver disease. 2D ultrasound is the most widely used non-invasive tool for screening and monitoring, but associated diagnoses are highly subjective. We developed a scalable deep learning (DL) algorithm for quantitative scoring of liver steatosis from 2D ultrasound images. Approach & Results: Using retrospectively collected multi-view ultrasound data from 3,310 patients, 19,513 studies, and 228,075 images, we trained a DL algorithm to diagnose steatosis stages (healthy, mild, moderate, or severe) from ultrasound diagnoses. Performance was validated on two multi-scanner unblinded and blinded (initially to DL developer) histology-proven cohorts (147 and 112 patients) with histopathology fatty cell percentage diagnoses, and a subset with FibroScan diagnoses. We also quantified reliability across scanners and viewpoints. Results were evaluated using Bland-Altman and receiver operating characteristic (ROC) analysis. The DL algorithm demonstrates repeatable measurements with a moderate number of images (3 for each viewpoint) and high agreement across 3 premium ultrasound scanners. High diagnostic performance was observed across all viewpoints: area under the curves of the ROC to classify >=mild, >=moderate, =severe steatosis grades were 0.85, 0.90, and 0.93, respectively. The DL algorithm outperformed or performed at least comparably to FibroScan with statistically significant improvements for all levels on the unblinded histology-proven cohort, and for =severe steatosis on the blinded histology-proven cohort. Conclusions: The DL algorithm provides a reliable quantitative steatosis assessment across view and scanners on two multi-scanner cohorts. Diagnostic performance was high with comparable or better performance than FibroScan.
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Background. With the rise of highly portable, wireless, and low-cost ultrasound devices and automatic ultrasound acquisition techniques, an automated interpretation method requiring only a limited set of views as input could make preliminary cardiovascular disease diagnoses more accessible. In this study, we developed a deep learning (DL) method for automated detection of impaired left ventricular (LV) function and aortic valve (AV) regurgitation from apical four-chamber (A4C) ultrasound cineloops and investigated which anatomical structures or temporal frames provided the most relevant information for the DL model to enable disease classification. Methods and Results. A4C ultrasounds were extracted from 3,554 echocardiograms of patients with either impaired LV function (n=928), AV regurgitation (n=738), or no significant abnormalities (n=1,888). Two convolutional neural networks (CNNs) were trained separately to classify the respective disease cases against normal cases. The overall classification accuracy of the impaired LV function detection model was 86%, and that of the AV regurgitation detection model was 83%. Feature importance analyses demonstrated that the LV myocardium and mitral valve were important for detecting impaired LV function, while the tip of the mitral valve anterior leaflet, during opening, was considered important for detecting AV regurgitation. Conclusion. The proposed method demonstrated the feasibility of a 3D CNN approach in detection of impaired LV function and AV regurgitation using A4C ultrasound cineloops. The current research shows that DL methods can exploit large training data to detect diseases in a different way than conventionally agreed upon methods, and potentially reveal unforeseen diagnostic image features.
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Particle image velocimetry (PIV) is essential in experimental fluid dynamics. In the current work, we propose a new velocity field estimation paradigm, which achieves a synergetic combination of the deep learning method and the traditional cross-correlation method. Specifically, the deep learning method is used to optimize and correct a coarse velocity guess to achieve a super-resolution calculation. And the cross-correlation method provides the initial velocity field based on a coarse correlation with a large interrogation window. As a reference, the coarse velocity guess helps with improving the robustness of the proposed algorithm. This fully convolutional network with embedded cross-correlation is named as CC-FCN. CC-FCN has two types of input layers, one is for the particle images, and the other is for the initial velocity field calculated using cross-correlation with a coarse resolution. Firstly, two pyramidal modules extract features of particle images and initial velocity field respectively. Then the fusion module appropriately fuses these features. Finally, CC-FCN achieves the super-resolution calculation through a series of deconvolution layers to obtain the single-pixel velocity field. As the supervised learning strategy is considered, synthetic data sets including ground-truth fluid motions are generated to train the network parameters. Synthetic and real experimental PIV data sets are used to test the trained neural network in terms of accuracy, precision, spatial resolution and robustness. The test results show that these attributes of CC-FCN are further improved compared with those of other tested PIV algorithms. The proposed model could therefore provide competitive and robust estimations for PIV experiments.
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Federated learning, which shares the weights of the neural network across clients, is gaining attention in the healthcare sector as it enables training on a large corpus of decentralized data while maintaining data privacy. For example, this enables neural network training for COVID-19 diagnosis on chest X-ray (CXR) images without collecting patient CXR data across multiple hospitals. Unfortunately, the exchange of the weights quickly consumes the network bandwidth if highly expressive network architecture is employed. So-called split learning partially solves this problem by dividing a neural network into a client and a server part, so that the client part of the network takes up less extensive computation resources and bandwidth. However, it is not clear how to find the optimal split without sacrificing the overall network performance. To amalgamate these methods and thereby maximize their distinct strengths, here we show that the Vision Transformer, a recently developed deep learning architecture with straightforward decomposable configuration, is ideally suitable for split learning without sacrificing performance. Even under the non-independent and identically distributed data distribution which emulates a real collaboration between hospitals using CXR datasets from multiple sources, the proposed framework was able to attain performance comparable to data-centralized training. In addition, the proposed framework along with heterogeneous multi-task clients also improves individual task performances including the diagnosis of COVID-19, eliminating the need for sharing large weights with innumerable parameters. Our results affirm the suitability of Transformer for collaborative learning in medical imaging and pave the way forward for future real-world implementations.
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Purpose: To assess whether the three-dimensional (3D) structural configuration of the central retinal vessel trunk and its branches (CRVT&B) could be used as a diagnostic marker for glaucoma. Method: We trained a deep learning network to automatically segment the CRVT&B from the B-scans of the optical coherence tomography (OCT) volume of the optic nerve head (ONH). Subsequently, two different approaches were used for glaucoma diagnosis using the structural configuration of the CRVT&B as extracted from the OCT volumes. In the first approach, we aimed to provide a diagnosis using only 3D CNN and the 3D structure of the CRVT&B. For the second approach, we projected the 3D structure of the CRVT&B orthographically onto three planes to obtain 2D images, and then a 2D CNN was used for diagnosis. The segmentation accuracy was evaluated using the Dice coefficient, whereas the diagnostic accuracy was assessed using the area under the receiver operating characteristic curves (AUC). The diagnostic performance of the CRVT&B was also compared with that of retinal nerve fiber layer (RNFL) thickness. Results: Our segmentation network was able to efficiently segment retinal blood vessels from OCT scans. On a test set, we achieved a Dice coefficient of 0.81\pm0.07. The 3D and 2D diagnostic networks were able to differentiate glaucoma from non-glaucoma subjects with accuracies of 82.7% and 83.3%, respectively. The corresponding AUCs for CRVT&B were 0.89 and 0.90, higher than those obtained with RNFL thickness alone. Conclusions: Our work demonstrated that the diagnostic power of the CRVT&B is superior to that of a gold-standard glaucoma parameter, i.e., RNFL thickness. Our work also suggested that the major retinal blood vessels form a skeleton -- the configuration of which may be representative of major ONH structural changes as typically observed with the development and progression of glaucoma.
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Breast cancer is the most commonly diagnosed cancer and registers the highest number of deaths for women with cancer. Recent advancements in diagnostic activities combined with large-scale screening policies have significantly lowered the mortality rates for breast cancer patients. However, the manual inspection of tissue slides by the pathologists is cumbersome, time-consuming, and is subject to significant inter- and intra-observer variability. Recently, the advent of whole-slide scanning systems have empowered the rapid digitization of pathology slides, and enabled to develop digital workflows. These advances further enable to leverage Artificial Intelligence (AI) to assist, automate, and augment pathological diagnosis. But the AI techniques, especially Deep Learning (DL), require a large amount of high-quality annotated data to learn from. Constructing such task-specific datasets poses several challenges, such as, data-acquisition level constrains, time-consuming and expensive annotations, and anonymization of private information. In this paper, we introduce the BReAst Carcinoma Subtyping (BRACS) dataset, a large cohort of annotated Hematoxylin & Eosin (H&E)-stained images to facilitate the characterization of breast lesions. BRACS contains 547 Whole-Slide Images (WSIs), and 4539 Regions of Interest (ROIs) extracted from the WSIs. Each WSI, and respective ROIs, are annotated by the consensus of three board-certified pathologists into different lesion categories. Specifically, BRACS includes three lesion types, i.e., benign, malignant and atypical, which are further subtyped into seven categories. It is, to the best of our knowledge, the largest annotated dataset for breast cancer subtyping both at WSI- and ROI-level. Further, by including the understudied atypical lesions, BRACS offers an unique opportunity for leveraging AI to better understand their characteristics.
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In the last decade, convolutional neural networks (ConvNets) have been a major focus of research in medical image analysis. However, the performances of ConvNets may be limited by a lack of explicit consideration of the long-range spatial relationships in an image. Recently Vision Transformer architectures have been proposed to address the shortcomings of ConvNets and have produced state-of-the-art performances in many medical imaging applications. Transformers may be a strong candidate for image registration because their substantially larger receptive field enables a more precise comprehension of the spatial correspondence between moving and fixed images. Here, we present TransMorph, a hybrid Transformer-ConvNet model for volumetric medical image registration. This paper also presents diffeomorphic and Bayesian variants of TransMorph: the diffeomorphic variants ensure the topology-preserving deformations, and the Bayesian variant produces a well-calibrated registration uncertainty estimate. We extensively validated the proposed models using 3D medical images from three applications: inter-patient and atlas-to-patient brain MRI registration and phantom-to-CT registration. The proposed models are evaluated in comparison to a variety of existing registration methods and Transformer architectures. Qualitative and quantitative results demonstrate that the proposed Transformer-based model leads to a substantial performance improvement over the baseline methods, confirming the effectiveness of Transformers for medical image registration.
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Spectral super-resolution (SSR) refers to the hyperspectral image (HSI) recovery from an RGB counterpart. Due to the one-to-many nature of the SSR problem, a single RGB image can be reprojected to many HSIs. The key to tackle this ill-posed problem is to plug into multi-source prior information such as the natural spatial context-prior of RGB images, deep feature-prior or inherent statistical-prior of HSIs, etc., so as to effectively alleviate the degree of ill-posedness. However, most current approaches only consider the general and limited priors in their customized convolutional neural networks (CNNs), which leads to the inability to guarantee the confidence and fidelity of reconstructed spectra. In this paper, we propose a novel holistic prior-embedded relation network (HPRN) to integrate comprehensive priors to regularize and optimize the solution space of SSR. Basically, the core framework is delicately assembled by several multi-residual relation blocks (MRBs) that fully facilitate the transmission and utilization of the low-frequency content prior of RGBs. Innovatively, the semantic prior of RGB inputs is introduced to mark category attributes, and a semantic-driven spatial relation module (SSRM) is invented to perform the feature aggregation of clustered similar range for refining recovered characteristics. Additionally, we develop a transformer-based channel relation module (TCRM), which breaks the habit of employing scalars as the descriptors of channel-wise relations in the previous deep feature-prior, and replaces them with certain vectors to make the mapping function more robust and smoother. In order to maintain the mathematical correlation and spectral consistency between hyperspectral bands, the second-order prior constraints (SOPC) are incorporated into the loss function to guide the HSI reconstruction.
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Objective: Multiple Sclerosis (MS) is an autoimmune, and demyelinating disease that leads to lesions in the central nervous system. This disease can be tracked and diagnosed using Magnetic Resonance Imaging (MRI). Up to now a multitude of multimodality automatic biomedical approaches is used to segment lesions which are not beneficial for patients in terms of cost, time, and usability. The authors of the present paper propose a method employing just one modality (FLAIR image) to segment MS lesions accurately. Methods: A patch-based Convolutional Neural Network (CNN) is designed, inspired by 3D-ResNet and spatial-channel attention module, to segment MS lesions. The proposed method consists of three stages: (1) the contrast-limited adaptive histogram equalization (CLAHE) is applied to the original images and concatenated to the extracted edges in order to create 4D images; (2) the patches of size 80 * 80 * 80 * 2 are randomly selected from the 4D images; and (3) the extracted patches are passed into an attention-based CNN which is used to segment the lesions. Finally, the proposed method was compared to previous studies of the same dataset. Results: The current study evaluates the model, with a test set of ISIB challenge data. Experimental results illustrate that the proposed approach significantly surpasses existing methods in terms of Dice similarity and Absolute Volume Difference while the proposed method use just one modality (FLAIR) to segment the lesions. Conclusions: The authors have introduced an automated approach to segment the lesions which is based on, at most, two modalities as an input. The proposed architecture is composed of convolution, deconvolution, and an SCA-VoxRes module as an attention module. The results show, the proposed method outperforms well compare to other methods.
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Today, deep convolutional neural networks (CNNs) have demonstrated state-of-the-art performance for medical image segmentation, on various imaging modalities and tasks. Despite early success, segmentation networks may still generate anatomically aberrant segmentations, with holes or inaccuracies near the object boundaries. To enforce anatomical plausibility, recent research studies have focused on incorporating prior knowledge such as object shape or boundary, as constraints in the loss function. Prior integrated could be low-level referring to reformulated representations extracted from the ground-truth segmentations, or high-level representing external medical information such as the organ's shape or size. Over the past few years, prior-based losses exhibited a rising interest in the research field since they allow integration of expert knowledge while still being architecture-agnostic. However, given the diversity of prior-based losses on different medical imaging challenges and tasks, it has become hard to identify what loss works best for which dataset. In this paper, we establish a benchmark of recent prior-based losses for medical image segmentation. The main objective is to provide intuition onto which losses to choose given a particular task or dataset. To this end, four low-level and high-level prior-based losses are selected. The considered losses are validated on 8 different datasets from a variety of medical image segmentation challenges including the Decathlon, the ISLES and the WMH challenge. Results show that whereas low-level prior-based losses can guarantee an increase in performance over the Dice loss baseline regardless of the dataset characteristics, high-level prior-based losses can increase anatomical plausibility as per data characteristics.
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Ultrasound is the second most used modality in medical imaging. It is cost effective, hazardless, portable and implemented routinely in numerous clinical procedures. Nonetheless, image quality is characterized by granulated appearance, poor SNR and speckle noise. Specific for malignant tumors, the margins are blurred and indistinct. Thus, there is a great need for improving ultrasound image quality. We hypothesize that this can be achieved, using neural networks, by translation into a more realistic display which mimics an anatomical cut through the tissue. In order to achieve this goal, the preferable approach would be to use a set of paired images. However, this is practically impossible in our case. Therefore, Cycle Generative Adversarial Network (CycleGAN) was used, in order to learn each domain properties separately and enforce cross domain cycle consistency. The two datasets which were used for training the model were "Breast Ultrasound Images" (BUSI) and a set of optic images of poultry breast tissue samples acquired at our lab. The generated pseudo anatomical images provide improved visual discrimination of the lesions with clearer border definition and pronounced contrast. In order to evaluate the preservation of the anatomical features, the lesions in the ultrasonic images and the generated pseudo anatomical images were both automatically segmented and compared. This comparison yielded median dice score of 0.91 for the benign tumors and 0.70 for the malignant ones. The median lesion center error was 0.58% and 3.27% for the benign and malignancies respectively and the median area error index was 0.40% and 4.34% for the benign and malignancies respectively. In conclusion, these generated pseudo anatomical images, which are presented in a more intuitive way, enhance tissue anatomy and can potentially simplify the diagnosis and improve the clinical outcome.
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Synthetic digital twins based on medical data accelerate the acquisition, labelling and decision making procedure in digital healthcare. A core part of digital healthcare twins is model-based data synthesis, which permits the generation of realistic medical signals without requiring to cope with the modelling complexity of anatomical and biochemical phenomena producing them in reality. Unfortunately, algorithms for cardiac data synthesis have been so far scarcely studied in the literature. An important imaging modality in the cardiac examination is three-directional CINE multi-slice myocardial velocity mapping (3Dir MVM), which provides a quantitative assessment of cardiac motion in three orthogonal directions of the left ventricle. The long acquisition time and complex acquisition produce make it more urgent to produce synthetic digital twins of this imaging modality. In this study, we propose a hybrid deep learning (HDL) network, especially for synthetic 3Dir MVM data. Our algorithm is featured by a hybrid UNet and a Generative Adversarial Network with a foreground-background generation scheme. The experimental results show that from temporally down-sampled magnitude CINE images (six times), our proposed algorithm can still successfully synthesise high temporal resolution 3Dir MVM CMR data (PSNR=42.32) with precise left ventricle segmentation (DICE=0.92). These performance scores indicate that our proposed HDL algorithm can be implemented in real-world digital twins for myocardial velocity mapping data simulation. To the best of our knowledge, this work is the first one in the literature investigating digital twins of the 3Dir MVM CMR, which has shown great potential for improving the efficiency of clinical studies via synthesised cardiac data.
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A critical step in virtual dental treatment planning is to accurately delineate all tooth-bone structures from CBCT with high fidelity and accurate anatomical information. Previous studies have established several methods for CBCT segmentation using deep learning. However, the inherent resolution discrepancy of CBCT and the loss of occlusal and dentition information largely limited its clinical applicability. Here, we present a Deep Dental Multimodal Analysis (DDMA) framework consisting of a CBCT segmentation model, an intraoral scan (IOS) segmentation model (the most accurate digital dental model), and a fusion model to generate 3D fused crown-root-bone structures with high fidelity and accurate occlusal and dentition information. Our model was trained with a large-scale dataset with 503 CBCT and 28,559 IOS meshes manually annotated by experienced human experts. For CBCT segmentation, we use a five-fold cross validation test, each with 50 CBCT, and our model achieves an average Dice coefficient and IoU of 93.99% and 88.68%, respectively, significantly outperforming the baselines. For IOS segmentations, our model achieves an mIoU of 93.07% and 95.70% on the maxillary and mandible on a test set of 200 IOS meshes, which are 1.77% and 3.52% higher than the state-of-art method. Our DDMA framework takes about 20 to 25 minutes to generate the fused 3D mesh model following the sequential processing order, compared to over 5 hours by human experts. Notably, our framework has been incorporated into a software by a clear aligner manufacturer, and real-world clinical cases demonstrate that our model can visualize crown-root-bone structures during the entire orthodontic treatment and can predict risks like dehiscence and fenestration. These findings demonstrate the potential of multi-modal deep learning to improve the quality of digital dental models and help dentists make better clinical decisions.
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The high prevalence of work-related musculoskeletal disorders (WMSDs) could be addressed by optimizing Human-Robot Collaboration (HRC) frameworks for manufacturing applications. In this context, this paper proposes two hypotheses for ergonomically effective task delegation and HRC. The first hypothesis states that it is possible to quantify ergonomically professional tasks using motion data from a reduced set of sensors. Then, the most dangerous tasks can be delegated to a collaborative robot. The second hypothesis is that by including gesture recognition and spatial adaptation, the ergonomics of an HRC scenario can be improved by avoiding needless motions that could expose operators to ergonomic risks and by lowering the physical effort required of operators. An HRC scenario for a television manufacturing process is optimized to test both hypotheses. For the ergonomic evaluation, motion primitives with known ergonomic risks were modeled for their detection in professional tasks and to estimate a risk score based on the European Assembly Worksheet (EAWS). A Deep Learning gesture recognition module trained with egocentric television assembly data was used to complement the collaboration between the human operator and the robot. Additionally, a skeleton-tracking algorithm provided the robot with information about the operator's pose, allowing it to spatially adapt its motion to the operator's anthropometrics. Three experiments were conducted to determine the effect of gesture recognition and spatial adaptation on the operator's range of motion. The rate of spatial adaptation was used as a key performance indicator (KPI), and a new KPI for measuring the reduction in the operator's motion is presented in this paper.
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Purpose - To develop and validate a deep learning (DL) framework for the detection and quantification of drusen and reticular pseudodrusen (RPD) on optical coherence tomography scans. Design - Development and validation of deep learning models for classification and feature segmentation. Methods - A DL framework was developed consisting of a classification model and an out-of-distribution (OOD) detection model for the identification of ungradable scans; a classification model to identify scans with drusen or RPD; and an image segmentation model to independently segment lesions as RPD or drusen. Data were obtained from 1284 participants in the UK Biobank (UKBB) with a self-reported diagnosis of age-related macular degeneration (AMD) and 250 UKBB controls. Drusen and RPD were manually delineated by five retina specialists. The main outcome measures were sensitivity, specificity, area under the ROC curve (AUC), kappa, accuracy and intraclass correlation coefficient (ICC). Results - The classification models performed strongly at their respective tasks (0.95, 0.93, and 0.99 AUC, respectively, for the ungradable scans classifier, the OOD model, and the drusen and RPD classification model). The mean ICC for drusen and RPD area vs. graders was 0.74 and 0.61, respectively, compared with 0.69 and 0.68 for intergrader agreement. FROC curves showed that the model's sensitivity was close to human performance. Conclusions - The models achieved high classification and segmentation performance, similar to human performance. Application of this robust framework will further our understanding of RPD as a separate entity from drusen in both research and clinical settings.
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We present a large-scale study of imitating human demonstrations on tasks that require a virtual robot to search for objects in new environments -- (1) ObjectGoal Navigation (e.g. 'find & go to a chair') and (2) Pick&Place (e.g. 'find mug, pick mug, find counter, place mug on counter'). First, we develop a virtual teleoperation data-collection infrastructure -- connecting Habitat simulator running in a web browser to Amazon Mechanical Turk, allowing remote users to teleoperate virtual robots, safely and at scale. We collect 80k demonstrations for ObjectNav and 12k demonstrations for Pick&Place, which is an order of magnitude larger than existing human demonstration datasets in simulation or on real robots. Second, we attempt to answer the question -- how does large-scale imitation learning (IL) (which hasn't been hitherto possible) compare to reinforcement learning (RL) (which is the status quo)? On ObjectNav, we find that IL (with no bells or whistles) using 70k human demonstrations outperforms RL using 240k agent-gathered trajectories. The IL-trained agent demonstrates efficient object-search behavior -- it peeks into rooms, checks corners for small objects, turns in place to get a panoramic view -- none of these are exhibited as prominently by the RL agent, and to induce these behaviors via RL would require tedious reward engineering. Finally, accuracy vs. training data size plots show promising scaling behavior, suggesting that simply collecting more demonstrations is likely to advance the state of art further. On Pick&Place, the comparison is starker -- IL agents achieve ${\sim}$18% success on episodes with new object-receptacle locations when trained with 9.5k human demonstrations, while RL agents fail to get beyond 0%. Overall, our work provides compelling evidence for investing in large-scale imitation learning. Project page: https://ram81.github.io/projects/habitat-web.
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This study established a feature-enhanced adversarial semi-supervised semantic segmentation model to automatically annotate pulmonary embolism lesion areas in computed tomography pulmonary angiogram (CTPA) images. In current studies, all of the PE CTPA image segmentation methods are trained by supervised learning. However, the supervised learning models need to be retrained and the images need to be relabeled when the CTPA images come from different hospitals. This study proposed a semi-supervised learning method to make the model applicable to different datasets by adding a small amount of unlabeled images. By training the model with both labeled and unlabeled images, the accuracy of unlabeled images can be improved and the labeling cost can be reduced. Our semi-supervised segmentation model includes a segmentation network and a discriminator network. We added feature information generated from the encoder of segmentation network to the discriminator so that it can learn the similarity between predicted mask and ground truth mask. This HRNet-based architecture can maintain a higher resolution for convolutional operations so the prediction of small PE lesion areas can be improved. We used the labeled open-source dataset and the unlabeled National Cheng Kung University Hospital (NCKUH) (IRB number: B-ER-108-380) dataset to train the semi-supervised learning model, and the resulting mean intersection over union (mIOU), dice score, and sensitivity achieved 0.3510, 0.4854, and 0.4253, respectively on the NCKUH dataset. Then, we fine-tuned and tested the model with a small amount of unlabeled PE CTPA images from China Medical University Hospital (CMUH) (IRB number: CMUH110-REC3-173) dataset. Comparing the results of our semi-supervised model with the supervised model, the mIOU, dice score, and sensitivity improved from 0.2344, 0.3325, and 0.3151 to 0.3721, 0.5113, and 0.4967, respectively.
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Ischemic strokes are often caused by large vessel occlusions (LVOs), which can be visualized and diagnosed with Computed Tomography Angiography scans. As time is brain, a fast, accurate and automated diagnosis of these scans is desirable. Human readers compare the left and right hemispheres in their assessment of strokes. A large training data set is required for a standard deep learning-based model to learn this strategy from data. As labeled medical data in this field is rare, other approaches need to be developed. To both include the prior knowledge of side comparison and increase the amount of training data, we propose an augmentation method that generates artificial training samples by recombining vessel tree segmentations of the hemispheres or hemisphere subregions from different patients. The subregions cover vessels commonly affected by LVOs, namely the internal carotid artery (ICA) and middle cerebral artery (MCA). In line with the augmentation scheme, we use a 3D-DenseNet fed with task-specific input, fostering a side-by-side comparison between the hemispheres. Furthermore, we propose an extension of that architecture to process the individual hemisphere subregions. All configurations predict the presence of an LVO, its side, and the affected subregion. We show the effect of recombination as an augmentation strategy in a 5-fold cross validated ablation study. We enhanced the AUC for patient-wise classification regarding the presence of an LVO of all investigated architectures. For one variant, the proposed method improved the AUC from 0.73 without augmentation to 0.89. The best configuration detects LVOs with an AUC of 0.91, LVOs in the ICA with an AUC of 0.96, and in the MCA with 0.91 while accurately predicting the affected side.
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[Purpose] The pathology is decisive for disease diagnosis, but relies heavily on the experienced pathologists. Recently, pathological artificial intelligence (PAI) is thought to improve diagnostic accuracy and efficiency. However, the high performance of PAI based on deep learning in the laboratory generally cannot be reproduced in the clinic. [Methods] Because the data preparation is important for PAI, the paper has reviewed PAI-related studies in the PubMed database published from January 2017 to February 2022, and 118 studies were included. The in-depth analysis of methods for preparing data is performed, including obtaining slides of pathological tissue, cleaning, screening, and then digitizing. Expert review, image annotation, dataset division for model training and validation are also discussed. We further discuss the reasons why the high performance of PAI is not reproducible in the clinical practices and show some effective ways to improve clinical performances of PAI. [Results] The robustness of PAI depend on randomized collection of representative disease slides, including rigorous quality control and screening, correction of digital discrepancies, reasonable annotation, and the amount of data. The digital pathology is fundamental of clinical-grade PAI, and the techniques of data standardization and weakly supervised learning methods based on whole slide image (WSI) are effective ways to overcome obstacles of performance reproduction. [Conclusion] The representative data, the amount of labeling and consistency from multi-centers is the key to performance reproduction. The digital pathology for clinical diagnosis, data standardization and technique of WSI-based weakly supervised learning hopefully build clinical-grade PAI. Keywords: pathological artificial intelligence; data preparation; clinical-grade; deep learning
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Eosinophilic esophagitis (EoE) is a chronic allergic inflammatory condition of the esophagus associated with elevated esophageal eosinophils. Second only to gastroesophageal reflux disease, EoE is one of the leading causes of chronic refractory dysphagia in adults and children. EoE diagnosis requires enumerating the density of esophageal eosinophils in esophageal biopsies, a somewhat subjective task that is time-consuming, thus reducing the ability to process the complex tissue structure. Previous artificial intelligence (AI) approaches that aimed to improve histology-based diagnosis focused on recapitulating identification and quantification of the area of maximal eosinophil density. However, this metric does not account for the distribution of eosinophils or other histological features, over the whole slide image. Here, we developed an artificial intelligence platform that infers local and spatial biomarkers based on semantic segmentation of intact eosinophils and basal zone distributions. Besides the maximal density of eosinophils (referred to as Peak Eosinophil Count [PEC]) and a maximal basal zone fraction, we identify two additional metrics that reflect the distribution of eosinophils and basal zone fractions. This approach enables a decision support system that predicts EoE activity and classifies the histological severity of EoE patients. We utilized a cohort that includes 1066 biopsy slides from 400 subjects to validate the system's performance and achieved a histological severity classification accuracy of 86.70%, sensitivity of 84.50%, and specificity of 90.09%. Our approach highlights the importance of systematically analyzing the distribution of biopsy features over the entire slide and paves the way towards a personalized decision support system that will assist not only in counting cells but can also potentially improve diagnosis and provide treatment prediction.
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With the increasing popularity and accessibility of high dynamic range (HDR) photography, tone mapping operators (TMOs) for dynamic range compression are practically demanding. In this paper, we develop a two-stage neural network-based TMO that is self-calibrated and perceptually optimized. In Stage one, motivated by the physiology of the early stages of the human visual system, we first decompose an HDR image into a normalized Laplacian pyramid. We then use two lightweight deep neural networks (DNNs), taking the normalized representation as input and estimating the Laplacian pyramid of the corresponding LDR image. We optimize the tone mapping network by minimizing the normalized Laplacian pyramid distance (NLPD), a perceptual metric aligning with human judgments of tone-mapped image quality. In Stage two, the input HDR image is self-calibrated to compute the final LDR image. We feed the same HDR image but rescaled with different maximum luminances to the learned tone mapping network, and generate a pseudo-multi-exposure image stack with different detail visibility and color saturation. We then train another lightweight DNN to fuse the LDR image stack into a desired LDR image by maximizing a variant of the structural similarity index for multi-exposure image fusion (MEF-SSIM), which has been proven perceptually relevant to fused image quality. The proposed self-calibration mechanism through MEF enables our TMO to accept uncalibrated HDR images, while being physiology-driven. Extensive experiments show that our method produces images with consistently better visual quality. Additionally, since our method builds upon three lightweight DNNs, it is among the fastest local TMOs.
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Precipitation governs Earth's hydroclimate, and its daily spatiotemporal fluctuations have major socioeconomic effects. Advances in Numerical weather prediction (NWP) have been measured by the improvement of forecasts for various physical fields such as temperature and pressure; however, large biases exist in precipitation prediction. We augment the output of the well-known NWP model CFSv2 with deep learning to create a hybrid model that improves short-range global precipitation at 1-, 2-, and 3-day lead times. To hybridise, we address the sphericity of the global data by using modified DLWP-CS architecture which transforms all the fields to cubed-sphere projection. Dynamical model precipitation and surface temperature outputs are fed into a modified DLWP-CS (UNET) to forecast ground truth precipitation. While CFSv2's average bias is +5 to +7 mm/day over land, the multivariate deep learning model decreases it to within -1 to +1 mm/day. Hurricane Katrina in 2005, Hurricane Ivan in 2004, China floods in 2010, India floods in 2005, and Myanmar storm Nargis in 2008 are used to confirm the substantial enhancement in the skill for the hybrid dynamical-deep learning model. CFSv2 typically shows a moderate to large bias in the spatial pattern and overestimates the precipitation at short-range time scales. The proposed deep learning augmented NWP model can address these biases and vastly improve the spatial pattern and magnitude of predicted precipitation. Deep learning enhanced CFSv2 reduces mean bias by 8x over important land regions for 1 day lead compared to CFSv2. The spatio-temporal deep learning system opens pathways to further the precision and accuracy in global short-range precipitation forecasts.
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Automated segmentation and volumetry of brain magnetic resonance imaging (MRI) scans are essential for the diagnosis of Parkinson's disease (PD) and Parkinson's plus syndromes (P-plus). To enhance the diagnostic performance, we adopt deep learning (DL) models in brain segmentation and compared their performance with the gold-standard non-DL method. We collected brain MRI scans of healthy controls (n=105) and patients with PD (n=105), multiple systemic atrophy (n=132), and progressive supranuclear palsy (n=69) at Samsung Medical Center from January 2017 to December 2020. Using the gold-standard non-DL model, FreeSurfer (FS), we segmented six brain structures: midbrain, pons, caudate, putamen, pallidum, and third ventricle, and considered them as annotating data for DL models, the representative V-Net and UNETR. The Dice scores and area under the curve (AUC) for differentiating normal, PD, and P-plus cases were calculated. The segmentation times of V-Net and UNETR for the six brain structures per patient were 3.48 +- 0.17 and 48.14 +- 0.97 s, respectively, being at least 300 times faster than FS (15,735 +- 1.07 s). Dice scores of both DL models were sufficiently high (>0.85), and their AUCs for disease classification were superior to that of FS. For classification of normal vs. P-plus and PD vs. multiple systemic atrophy (cerebellar type), the DL models and FS showed AUCs above 0.8. DL significantly reduces the analysis time without compromising the performance of brain segmentation and differential diagnosis. Our findings may contribute to the adoption of DL brain MRI segmentation in clinical settings and advance brain research.
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The growth of unruptured intracranial aneurysms (UIAs) is a predictor of rupture. Therefore, for further imaging surveillance and treatment planning, it is important to be able to predict if an UIA is likely to grow based on an initial baseline Time-of-Flight MRA (TOF-MRA). It is known that the size and shape of UIAs are predictors of aneurysm growth and/or rupture. We perform a feasibility study of using a mesh convolutional neural network for future UIA growth prediction from baseline TOF-MRAs. We include 151 TOF-MRAs, with 169 UIAs where 49 UIAs were classified as growing and 120 as stable, based on the clinical definition of growth (>1 mm increase in size in follow-up scan). UIAs were segmented from TOF-MRAs and meshes were automatically generated. We investigate the input of both UIA mesh only and region-of-interest (ROI) meshes including UIA and surrounding parent vessels. We develop a classification model to predict UIAs that will grow or remain stable. The model consisted of a mesh convolutional neural network including additional novel input edge features of shape index and curvedness which describe the surface topology. It was investigated if input edge mid-point co-ordinates influenced the model performance. The model with highest AUC (63.8%) for growth prediction was using UIA meshes with input edge mid-point co-ordinate features (average F1 score = 62.3%, accuracy = 66.9%, sensitivity = 57.3%, specificity = 70.8%). We present a future UIA growth prediction model based on a mesh convolutional neural network with promising results.
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Social engineering (SE) is a form of deception that aims to trick people into giving access to data, information, networks and even money. For decades SE has been a key method for attackers to gain access to an organization, virtually skipping all lines of defense. Attackers also regularly use SE to scam innocent people by making threatening phone calls which impersonate an authority or by sending infected emails which look like they have been sent from a loved one. SE attacks will likely remain a top attack vector for criminals because humans are the weakest link in cyber security. Unfortunately, the threat will only get worse now that a new technology called deepfakes as arrived. A deepfake is believable media (e.g., videos) created by an AI. Although the technology has mostly been used to swap the faces of celebrities, it can also be used to `puppet' different personas. Recently, researchers have shown how this technology can be deployed in real-time to clone someone's voice in a phone call or reenact a face in a video call. Given that any novice user can download this technology to use it, it is no surprise that criminals have already begun to monetize it to perpetrate their SE attacks. In this paper, we propose a lightweight application which can protect organizations and individuals from deepfake SE attacks. Through a challenge and response approach, we leverage the technical and theoretical limitations of deepfake technologies to expose the attacker. Existing defence solutions are too heavy as an end-point solution and can be evaded by a dynamic attacker. In contrast, our approach is lightweight and breaks the reactive arms race, putting the attacker at a disadvantage.
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Device Model Generalization (DMG) is a practical yet under-investigated research topic for on-device machine learning applications. It aims to improve the generalization ability of pre-trained models when deployed on resource-constrained devices, such as improving the performance of pre-trained cloud models on smart mobiles. While quite a lot of works have investigated the data distribution shift across clouds and devices, most of them focus on model fine-tuning on personalized data for individual devices to facilitate DMG. Despite their promising, these approaches require on-device re-training, which is practically infeasible due to the overfitting problem and high time delay when performing gradient calculation on real-time data. In this paper, we argue that the computational cost brought by fine-tuning can be rather unnecessary. We consequently present a novel perspective to improving DMG without increasing computational cost, i.e., device-specific parameter generation which directly maps data distribution to parameters. Specifically, we propose an efficient Device-cloUd collaborative parametErs generaTion framework DUET. DUET is deployed on a powerful cloud server that only requires the low cost of forwarding propagation and low time delay of data transmission between the device and the cloud. By doing so, DUET can rehearse the device-specific model weight realizations conditioned on the personalized real-time data for an individual device. Importantly, our DUET elegantly connects the cloud and device as a 'duet' collaboration, frees the DMG from fine-tuning, and enables a faster and more accurate DMG paradigm. We conduct an extensive experimental study of DUET on three public datasets, and the experimental results confirm our framework's effectiveness and generalisability for different DMG tasks.
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Autonomous vehicles have limited computational resources; hence, their control systems must be efficient. The cost and size of sensors have limited the development of self-driving cars. To overcome these restrictions, this study proposes an efficient framework for the operation of vision-based automatic vehicles; the framework requires only a monocular camera and a few inexpensive radars. The proposed algorithm comprises a multi-task UNet (MTUNet) network for extracting image features and constrained iterative linear quadratic regulator (CILQR) and vision predictive control (VPC) modules for rapid motion planning and control. MTUNet is designed to simultaneously solve lane line segmentation, the ego vehicle's heading angle regression, road type classification, and traffic object detection tasks at approximately 40 FPS (frames per second) for 228 x 228 pixel RGB input images. The CILQR controllers then use the MTUNet outputs and radar data as inputs to produce driving commands for lateral and longitudinal vehicle guidance within only 1 ms. In particular, the VPC algorithm is included to reduce steering command latency to below actuator latency to prevent vehicle understeer during tight turns. The VPC algorithm uses road curvature data from MTUNet to estimate the correction of the current steering angle at a look-ahead point to adjust the turning amount. Including the VPC algorithm in a VPC-CILQR controller leads to higher performance than CILQR alone; this controller can minimize the influence of command lag, maintaining the ego car's speed and lateral offset at 76 km/h and within 0.52 m, respectively, on a simulated road with a curvature of 0.03 1/m. Our experiments demonstrate that the proposed autonomous driving system, which does not require high-definition maps, could be applied in current autonomous vehicles.
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Purpose: (1) To develop a deep learning algorithm to automatically segment structures of the optic nerve head (ONH) and macula in 3D wide-field optical coherence tomography (OCT) scans; (2) To assess whether 3D macula or ONH structures (or the combination of both) provide the best diagnostic power for glaucoma. Methods: A cross-sectional comparative study was performed which included wide-field swept-source OCT scans from 319 glaucoma subjects and 298 non-glaucoma subjects. All scans were compensated to improve deep-tissue visibility. We developed a deep learning algorithm to automatically label all major ONH tissue structures by using 270 manually annotated B-scans for training. The performance of our algorithm was assessed using the Dice coefficient (DC). A glaucoma classification algorithm (3D CNN) was then designed using a combination of 500 OCT volumes and their corresponding automatically segmented masks. This algorithm was trained and tested on 3 datasets: OCT scans cropped to contain the macular tissues only, those to contain the ONH tissues only, and the full wide-field OCT scans. The classification performance for each dataset was reported using the AUC. Results: Our segmentation algorithm was able to segment ONH and macular tissues with a DC of 0.94 $\pm$ 0.003. The classification algorithm was best able to diagnose glaucoma using wide-field 3D-OCT volumes with an AUC of 0.99 $\pm$ 0.01, followed by ONH volumes with an AUC of 0.93 $\pm$ 0.06, and finally macular volumes with an AUC of 0.91 $\pm$ 0.11. Conclusions: this study showed that using wide-field OCT as compared to the typical OCT images containing just the ONH or macular may allow for a significantly improved glaucoma diagnosis. This may encourage the mainstream adoption of 3D wide-field OCT scans. For clinical AI studies that use traditional machines, we would recommend the use of ONH scans as opposed to macula scans.
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While vision transformers (ViTs) have continuously achieved new milestones in the field of computer vision, their sophisticated network architectures with high computation and memory costs have impeded their deployment on resource-limited edge devices. In this paper, we propose a hardware-efficient image-adaptive token pruning framework called HeatViT for efficient yet accurate ViT acceleration on embedded FPGAs. By analyzing the inherent computational patterns in ViTs, we first design an effective attention-based multi-head token selector, which can be progressively inserted before transformer blocks to dynamically identify and consolidate the non-informative tokens from input images. Moreover, we implement the token selector on hardware by adding miniature control logic to heavily reuse existing hardware components built for the backbone ViT. To improve the hardware efficiency, we further employ 8-bit fixed-point quantization, and propose polynomial approximations with regularization effect on quantization error for the frequently used nonlinear functions in ViTs. Finally, we propose a latency-aware multi-stage training strategy to determine the transformer blocks for inserting token selectors and optimize the desired (average) pruning rates for inserted token selectors, in order to improve both the model accuracy and inference latency on hardware. Compared to existing ViT pruning studies, under the similar computation cost, HeatViT can achieve 0.7%$\sim$8.9% higher accuracy; while under the similar model accuracy, HeatViT can achieve more than 28.4%$\sim$65.3% computation reduction, for various widely used ViTs, including DeiT-T, DeiT-S, DeiT-B, LV-ViT-S, and LV-ViT-M, on the ImageNet dataset. Compared to the baseline hardware accelerator, our implementations of HeatViT on the Xilinx ZCU102 FPGA achieve 3.46$\times$$\sim$4.89$\times$ speedup.
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Purpose: Surgery scene understanding with tool-tissue interaction recognition and automatic report generation can play an important role in intra-operative guidance, decision-making and postoperative analysis in robotic surgery. However, domain shifts between different surgeries with inter and intra-patient variation and novel instruments' appearance degrade the performance of model prediction. Moreover, it requires output from multiple models, which can be computationally expensive and affect real-time performance. Methodology: A multi-task learning (MTL) model is proposed for surgical report generation and tool-tissue interaction prediction that deals with domain shift problems. The model forms of shared feature extractor, mesh-transformer branch for captioning and graph attention branch for tool-tissue interaction prediction. The shared feature extractor employs class incremental contrastive learning (CICL) to tackle intensity shift and novel class appearance in the target domain. We design Laplacian of Gaussian (LoG) based curriculum learning into both shared and task-specific branches to enhance model learning. We incorporate a task-aware asynchronous MTL optimization technique to fine-tune the shared weights and converge both tasks optimally. Results: The proposed MTL model trained using task-aware optimization and fine-tuning techniques reported a balanced performance (BLEU score of 0.4049 for scene captioning and accuracy of 0.3508 for interaction detection) for both tasks on the target domain and performed on-par with single-task models in domain adaptation. Conclusion: The proposed multi-task model was able to adapt to domain shifts, incorporate novel instruments in the target domain, and perform tool-tissue interaction detection and report generation on par with single-task models.
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The Artemis program requires robotic and crewed lunar rovers for resource prospecting and exploitation, construction and maintenance of facilities, and human exploration. These rovers must support navigation for 10s of kilometers (km) from base camps. A lunar science rover mission concept - Endurance-A, has been recommended by the new Decadal Survey as the highest priority medium-class mission of the Lunar Discovery and Exploration Program, and would be required to traverse approximately 2000 km in the South Pole-Aitkin (SPA) Basin, with individual drives of several kilometers between stops for downlink. These rover mission scenarios require functionality that provides onboard, autonomous, global position knowledge ( aka absolute localization). However, planetary rovers have no onboard global localization capability to date; they have only used relative localization, by integrating combinations of wheel odometry, visual odometry, and inertial measurements during each drive to track position relative to the start of each drive. In this work, we summarize recent developments from the LunarNav project, where we have developed algorithms and software to enable lunar rovers to estimate their global position and heading on the Moon with a goal performance of position error less than 5 meters (m) and heading error less than 3-degree, 3-sigma, in sunlit areas. This will be achieved autonomously onboard by detecting craters in the vicinity of the rover and matching them to a database of known craters mapped from orbit. The overall technical framework consists of three main elements: 1) crater detection, 2) crater matching, and 3) state estimation. In previous work, we developed crater detection algorithms for three different sensing modalities. Our results suggest that rover localization with an error less than 5 m is highly probable during daytime operations.
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Challenges in strawberry picking made selective harvesting robotic technology demanding. However, selective harvesting of strawberries is complicated forming a few scientific research questions. Most available solutions only deal with a specific picking scenario, e.g., picking only a single variety of fruit in isolation. Nonetheless, most economically viable (e.g. high-yielding and/or disease-resistant) varieties of strawberry are grown in dense clusters. The current perception technology in such use cases is inefficient. In this work, we developed a novel system capable of harvesting strawberries with several unique features. The features allow the system to deal with very complex picking scenarios, e.g. dense clusters. Our concept of a modular system makes our system reconfigurable to adapt to different picking scenarios. We designed, manufactured, and tested a picking head with 2.5 DOF (2 independent mechanisms and 1 dependent cutting system) capable of removing possible occlusions and harvesting targeted strawberries without contacting fruit flesh to avoid damage and bruising. In addition, we developed a novel perception system to localise strawberries and detect their key points, picking points, and determine their ripeness. For this purpose, we introduced two new datasets. Finally, we tested the system in a commercial strawberry growing field and our research farm with three different strawberry varieties. The results show the effectiveness and reliability of the proposed system. The designed picking head was able to remove occlusions and harvest strawberries effectively. The perception system was able to detect and determine the ripeness of strawberries with 95% accuracy. In total, the system was able to harvest 87% of all detected strawberries with a success rate of 83% for all pluckable fruits. We also discuss a series of open research questions in the discussion section.
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There is growing concern that male reproduction is affected by environmental chemicals. One way to determine the adverse effect of environmental pollutants is to use wild animals as monitors and evaluate testicular toxicity using histopathology. Automated methods are necessary tools in the quantitative assessment of histopathology to overcome the subjectivity of manual evaluation and accelerate the process. We propose an automated method to process histology images of testicular tissue. Segmenting the epithelial layer of the seminiferous tubule is a prerequisite for developing automated methods to detect abnormalities in tissue. We suggest an encoder-decoder fully connected convolutional neural network (F-CNN) model to segment the epithelial layer of the seminiferous tubules in histological images. Using ResNet-34 modules in the encoder adds a shortcut mechanism to avoid the gradient vanishing and accelerate the network convergence. The squeeze & excitation (SE) attention block is integrated into the encoding module improving the segmentation and localization of epithelium. We applied the proposed method for the 2-class problem where the epithelial layer of the tubule is the target class. The f-score and IoU of the proposed method are 0.85 and 0.92. Although the proposed method is trained on a limited training set, it performs well on an independent dataset and outperforms other state-of-the-art methods. The pretrained ResNet-34 in the encoder and attention block suggested in the decoder result in better segmentation and generalization. The proposed method can be applied to testicular tissue images from any mammalian species and can be used as the first part of a fully automated testicular tissue processing pipeline. The dataset and codes are publicly available on GitHub.
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Artificial intelligence methods show great promise in increasing the quality and speed of work with large astronomical datasets, but the high complexity of these methods leads to the extraction of dataset-specific, non-robust features. Therefore, such methods do not generalize well across multiple datasets. We present a universal domain adaptation method, \textit{DeepAstroUDA}, as an approach to overcome this challenge. This algorithm performs semi-supervised domain adaptation and can be applied to datasets with different data distributions and class overlaps. Non-overlapping classes can be present in any of the two datasets (the labeled source domain, or the unlabeled target domain), and the method can even be used in the presence of unknown classes. We apply our method to three examples of galaxy morphology classification tasks of different complexities ($3$-class and $10$-class problems), with anomaly detection: 1) datasets created after different numbers of observing years from a single survey (LSST mock data of $1$ and $10$ years of observations); 2) data from different surveys (SDSS and DECaLS); and 3) data from observing fields with different depths within one survey (wide field and Stripe 82 deep field of SDSS). For the first time, we demonstrate the successful use of domain adaptation between very discrepant observational datasets. \textit{DeepAstroUDA} is capable of bridging the gap between two astronomical surveys, increasing classification accuracy in both domains (up to $40\%$ on the unlabeled data), and making model performance consistent across datasets. Furthermore, our method also performs well as an anomaly detection algorithm and successfully clusters unknown class samples even in the unlabeled target dataset.
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Patient motion during PET is inevitable. Its long acquisition time not only increases the motion and the associated artifacts but also the patient's discomfort, thus PET acceleration is desirable. However, accelerating PET acquisition will result in reconstructed images with low SNR, and the image quality will still be degraded by motion-induced artifacts. Most of the previous PET motion correction methods are motion type specific that require motion modeling, thus may fail when multiple types of motion present together. Also, those methods are customized for standard long acquisition and could not be directly applied to accelerated PET. To this end, modeling-free universal motion correction reconstruction for accelerated PET is still highly under-explored. In this work, we propose a novel deep learning-aided motion correction and reconstruction framework for accelerated PET, called Fast-MC-PET. Our framework consists of a universal motion correction (UMC) and a short-to-long acquisition reconstruction (SL-Reon) module. The UMC enables modeling-free motion correction by estimating quasi-continuous motion from ultra-short frame reconstructions and using this information for motion-compensated reconstruction. Then, the SL-Recon converts the accelerated UMC image with low counts to a high-quality image with high counts for our final reconstruction output. Our experimental results on human studies show that our Fast-MC-PET can enable 7-fold acceleration and use only 2 minutes acquisition to generate high-quality reconstruction images that outperform/match previous motion correction reconstruction methods using standard 15 minutes long acquisition data.
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Large-scale embedding-based retrieval (EBR) is the cornerstone of search-related industrial applications. Given a user query, the system of EBR aims to identify relevant information from a large corpus of documents that may be tens or hundreds of billions in size. The storage and computation turn out to be expensive and inefficient with massive documents and high concurrent queries, making it difficult to further scale up. To tackle the challenge, we propose a binary embedding-based retrieval (BEBR) engine equipped with a recurrent binarization algorithm that enables customized bits per dimension. Specifically, we compress the full-precision query and document embeddings, formulated as float vectors in general, into a composition of multiple binary vectors using a lightweight transformation model with residual multilayer perception (MLP) blocks. We can therefore tailor the number of bits for different applications to trade off accuracy loss and cost savings. Importantly, we enable task-agnostic efficient training of the binarization model using a new embedding-to-embedding strategy. We also exploit the compatible training of binary embeddings so that the BEBR engine can support indexing among multiple embedding versions within a unified system. To further realize efficient search, we propose Symmetric Distance Calculation (SDC) to achieve lower response time than Hamming codes. We successfully employed the introduced BEBR to Tencent products, including Sogou, Tencent Video, QQ World, etc. The binarization algorithm can be seamlessly generalized to various tasks with multiple modalities. Extensive experiments on offline benchmarks and online A/B tests demonstrate the efficiency and effectiveness of our method, significantly saving 30%~50% index costs with almost no loss of accuracy at the system level.
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The promising research on Artificial Intelligence usages in suicide prevention has principal gaps, including black box methodologies, inadequate outcome measures, and scarce research on non-verbal inputs, such as social media images (despite their popularity today, in our digital era). This study addresses these gaps and combines theory-driven and bottom-up strategies to construct a hybrid and interpretable prediction model of valid suicide risk from images. The lead hypothesis was that images contain valuable information about emotions and interpersonal relationships, two central concepts in suicide-related treatments and theories. The dataset included 177,220 images by 841 Facebook users who completed a gold-standard suicide scale. The images were represented with CLIP, a state-of-the-art algorithm, which was utilized, unconventionally, to extract predefined features that served as inputs to a simple logistic-regression prediction model (in contrast to complex neural networks). The features addressed basic and theory-driven visual elements using everyday language (e.g., bright photo, photo of sad people). The results of the hybrid model (that integrated theory-driven and bottom-up methods) indicated high prediction performance that surpassed common bottom-up algorithms, thus providing a first proof that images (alone) can be leveraged to predict validated suicide risk. Corresponding with the lead hypothesis, at-risk users had images with increased negative emotions and decreased belonginess. The results are discussed in the context of non-verbal warning signs of suicide. Notably, the study illustrates the advantages of hybrid models in such complicated tasks and provides simple and flexible prediction strategies that could be utilized to develop real-life monitoring tools of suicide.
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Adversarial attacks are valuable for evaluating the robustness of deep learning models. Existing attacks are primarily conducted on the visible light spectrum (e.g., pixel-wise texture perturbation). However, attacks targeting texture-free X-ray images remain underexplored, despite the widespread application of X-ray imaging in safety-critical scenarios such as the X-ray detection of prohibited items. In this paper, we take the first step toward the study of adversarial attacks targeted at X-ray prohibited item detection, and reveal the serious threats posed by such attacks in this safety-critical scenario. Specifically, we posit that successful physical adversarial attacks in this scenario should be specially designed to circumvent the challenges posed by color/texture fading and complex overlapping. To this end, we propose X-adv to generate physically printable metals that act as an adversarial agent capable of deceiving X-ray detectors when placed in luggage. To resolve the issues associated with color/texture fading, we develop a differentiable converter that facilitates the generation of 3D-printable objects with adversarial shapes, using the gradients of a surrogate model rather than directly generating adversarial textures. To place the printed 3D adversarial objects in luggage with complex overlapped instances, we design a policy-based reinforcement learning strategy to find locations eliciting strong attack performance in worst-case scenarios whereby the prohibited items are heavily occluded by other items. To verify the effectiveness of the proposed X-Adv, we conduct extensive experiments in both the digital and the physical world (employing a commercial X-ray security inspection system for the latter case). Furthermore, we present the physical-world X-ray adversarial attack dataset XAD.
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U-10Zr-based nuclear fuel is pursued as a primary candidate for next-generation sodium-cooled fast reactors. However, more advanced characterization and analysis are needed to form a fundamental understating of the fuel performance, and make U-10Zr fuel qualify for commercial use. The movement of lanthanides across the fuel section from the hot fuel center to the cool cladding surface is one of the key factors to affect fuel performance. In the advanced annular U-10Zr fuel, the lanthanides present as fission gas bubbles. Due to a lack of annotated data, existing literature utilized a multiple-threshold method to separate the bubbles and calculate bubble statistics on an annular fuel. However, the multiple-threshold method cannot achieve robust performance on images with different qualities and contrasts, and cannot distinguish different bubbles. This paper proposes a hybrid framework for efficient bubble segmentation. We develop a bubble annotation tool and generate the first fission gas bubble dataset with more than 3000 bubbles from 24 images. A multi-task deep learning network integrating U-Net and ResNet is designed to accomplish instance-level bubble segmentation. Combining the segmentation results and image processing step achieves the best recall ratio of more than 90% with very limited annotated data. Our model shows outstanding improvement by comparing the previously proposed thresholding method. The proposed method has promising to generate a more accurate quantitative analysis of fission gas bubbles on U-10Zr annular fuels. The results will contribute to identifying the bubbles with lanthanides and finally build the relationship between the thermal gradation and lanthanides movements of U-10Zr annular fuels. Mover, the deep learning model is applicable to other similar material micro-structure segmentation tasks.
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For robots to follow instructions from people, they must be able to connect the rich semantic information in human vocabulary, e.g. "can you get me the pink stuffed whale?" to their sensory observations and actions. This brings up a notably difficult challenge for robots: while robot learning approaches allow robots to learn many different behaviors from first-hand experience, it is impractical for robots to have first-hand experiences that span all of this semantic information. We would like a robot's policy to be able to perceive and pick up the pink stuffed whale, even if it has never seen any data interacting with a stuffed whale before. Fortunately, static data on the internet has vast semantic information, and this information is captured in pre-trained vision-language models. In this paper, we study whether we can interface robot policies with these pre-trained models, with the aim of allowing robots to complete instructions involving object categories that the robot has never seen first-hand. We develop a simple approach, which we call Manipulation of Open-World Objects (MOO), which leverages a pre-trained vision-language model to extract object-identifying information from the language command and image, and conditions the robot policy on the current image, the instruction, and the extracted object information. In a variety of experiments on a real mobile manipulator, we find that MOO generalizes zero-shot to a wide range of novel object categories and environments. In addition, we show how MOO generalizes to other, non-language-based input modalities to specify the object of interest such as finger pointing, and how it can be further extended to enable open-world navigation and manipulation. The project's website and evaluation videos can be found at https://robot-moo.github.io/
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Multi-modal fusion of sensors is a commonly used approach to enhance the performance of odometry estimation, which is also a fundamental module for mobile robots. However, the question of \textit{how to perform fusion among different modalities in a supervised sensor fusion odometry estimation task?} is still one of challenging issues remains. Some simple operations, such as element-wise summation and concatenation, are not capable of assigning adaptive attentional weights to incorporate different modalities efficiently, which make it difficult to achieve competitive odometry results. Recently, the Transformer architecture has shown potential for multi-modal fusion tasks, particularly in the domains of vision with language. In this work, we propose an end-to-end supervised Transformer-based LiDAR-Inertial fusion framework (namely TransFusionOdom) for odometry estimation. The multi-attention fusion module demonstrates different fusion approaches for homogeneous and heterogeneous modalities to address the overfitting problem that can arise from blindly increasing the complexity of the model. Additionally, to interpret the learning process of the Transformer-based multi-modal interactions, a general visualization approach is introduced to illustrate the interactions between modalities. Moreover, exhaustive ablation studies evaluate different multi-modal fusion strategies to verify the performance of the proposed fusion strategy. A synthetic multi-modal dataset is made public to validate the generalization ability of the proposed fusion strategy, which also works for other combinations of different modalities. The quantitative and qualitative odometry evaluations on the KITTI dataset verify the proposed TransFusionOdom could achieve superior performance compared with other related works.
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The Metaverse offers a second world beyond reality, where boundaries are non-existent, and possibilities are endless through engagement and immersive experiences using the virtual reality (VR) technology. Many disciplines can benefit from the advancement of the Metaverse when accurately developed, including the fields of technology, gaming, education, art, and culture. Nevertheless, developing the Metaverse environment to its full potential is an ambiguous task that needs proper guidance and directions. Existing surveys on the Metaverse focus only on a specific aspect and discipline of the Metaverse and lack a holistic view of the entire process. To this end, a more holistic, multi-disciplinary, in-depth, and academic and industry-oriented review is required to provide a thorough study of the Metaverse development pipeline. To address these issues, we present in this survey a novel multi-layered pipeline ecosystem composed of (1) the Metaverse computing, networking, communications and hardware infrastructure, (2) environment digitization, and (3) user interactions. For every layer, we discuss the components that detail the steps of its development. Also, for each of these components, we examine the impact of a set of enabling technologies and empowering domains (e.g., Artificial Intelligence, Security & Privacy, Blockchain, Business, Ethics, and Social) on its advancement. In addition, we explain the importance of these technologies to support decentralization, interoperability, user experiences, interactions, and monetization. Our presented study highlights the existing challenges for each component, followed by research directions and potential solutions. To the best of our knowledge, this survey is the most comprehensive and allows users, scholars, and entrepreneurs to get an in-depth understanding of the Metaverse ecosystem to find their opportunities and potentials for contribution.
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Multimodal emotion recognition identifies human emotions from various data modalities like video, text, and audio. However, we found that this task can be easily affected by noisy information that does not contain useful semantics. To this end, we present a novel paradigm that attempts to extract noise-resistant features in its pipeline and introduces a noise-aware learning scheme to effectively improve the robustness of multimodal emotion understanding. Our new pipeline, namely Noise-Resistant Multimodal Transformer (NORM-TR), mainly introduces a Noise-Resistant Generic Feature (NRGF) extractor and a Transformer for the multimodal emotion recognition task. In particular, we make the NRGF extractor learn a generic and disturbance-insensitive representation so that consistent and meaningful semantics can be obtained. Furthermore, we apply a Transformer to incorporate Multimodal Features (MFs) of multimodal inputs based on their relations to the NRGF. Therefore, the possible insensitive but useful information of NRGF could be complemented by MFs that contain more details. To train the NORM-TR properly, our proposed noise-aware learning scheme complements normal emotion recognition losses by enhancing the learning against noises. Our learning scheme explicitly adds noises to either all the modalities or a specific modality at random locations of a multimodal input sequence. We correspondingly introduce two adversarial losses to encourage the NRGF extractor to learn to extract the NRGFs invariant to the added noises, thus facilitating the NORM-TR to achieve more favorable multimodal emotion recognition performance. In practice, on several popular multimodal datasets, our NORM-TR achieves state-of-the-art performance and outperforms existing methods by a large margin, which demonstrates that the ability to resist noisy information is important for effective emotion recognition.
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Ocular Toxoplasmosis (OT), is a common eye infection caused by T. gondii that can cause vision problems. Diagnosis is typically done through a clinical examination and imaging, but these methods can be complicated and costly, requiring trained personnel. To address this issue, we have created a benchmark study that evaluates the effectiveness of existing pre-trained networks using transfer learning techniques to detect OT from fundus images. Furthermore, we have also analysed the performance of transfer-learning based segmentation networks to segment lesions in the images. This research seeks to provide a guide for future researchers looking to utilise DL techniques and develop a cheap, automated, easy-to-use, and accurate diagnostic method. We have performed in-depth analysis of different feature extraction techniques in order to find the most optimal one for OT classification and segmentation of lesions. For classification tasks, we have evaluated pre-trained models such as VGG16, MobileNetV2, InceptionV3, ResNet50, and DenseNet121 models. Among them, MobileNetV2 outperformed all other models in terms of Accuracy (Acc), Recall, and F1 Score outperforming the second-best model, InceptionV3 by 0.7% higher Acc. However, DenseNet121 achieved the best result in terms of Precision, which was 0.1% higher than MobileNetv2. For the segmentation task, this work has exploited U-Net architecture. In order to utilize transfer learning the encoder block of the traditional U-Net was replaced by MobileNetV2, InceptionV3, ResNet34, and VGG16 to evaluate different architectures moreover two different two different loss functions (Dice loss and Jaccard loss) were exploited in order to find the most optimal one. The MobileNetV2/U-Net outperformed ResNet34 by 0.5% and 2.1% in terms of Acc and Dice Score, respectively when Jaccard loss function is employed during the training.
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Humans and animals have a rich and flexible understanding of the physical world, which enables them to infer the underlying dynamical trajectories of objects and events, plausible future states, and use that to plan and anticipate the consequences of actions. However, the neural mechanisms underlying these computations are unclear. We combine a goal-driven modeling approach with dense neurophysiological data and high-throughput human behavioral readouts to directly impinge on this question. Specifically, we construct and evaluate several classes of sensory-cognitive networks to predict the future state of rich, ethologically-relevant environments, ranging from self-supervised end-to-end models with pixel-wise or object-centric objectives, to models that future predict in the latent space of purely static image-based or dynamic video-based pretrained foundation models. We find strong differentiation across these model classes in their ability to predict neural and behavioral data both within and across diverse environments. In particular, we find that neural responses are currently best predicted by models trained to predict the future state of their environment in the latent space of pretrained foundation models optimized for dynamic scenes in a self-supervised manner. Notably, models that future predict in the latent space of video foundation models that are optimized to support a diverse range of sensorimotor tasks, reasonably match both human behavioral error patterns and neural dynamics across all environmental scenarios that we were able to test. Overall, these findings suggest that the neural mechanisms and behaviors of primate mental simulation are thus far most consistent with being optimized to future predict on dynamic, reusable visual representations that are useful for Embodied AI more generally.
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HomeRobot (noun): An affordable compliant robot that navigates homes and manipulates a wide range of objects in order to complete everyday tasks. Open-Vocabulary Mobile Manipulation (OVMM) is the problem of picking any object in any unseen environment, and placing it in a commanded location. This is a foundational challenge for robots to be useful assistants in human environments, because it involves tackling sub-problems from across robotics: perception, language understanding, navigation, and manipulation are all essential to OVMM. In addition, integration of the solutions to these sub-problems poses its own substantial challenges. To drive research in this area, we introduce the HomeRobot OVMM benchmark, where an agent navigates household environments to grasp novel objects and place them on target receptacles. HomeRobot has two components: a simulation component, which uses a large and diverse curated object set in new, high-quality multi-room home environments; and a real-world component, providing a software stack for the low-cost Hello Robot Stretch to encourage replication of real-world experiments across labs. We implement both reinforcement learning and heuristic (model-based) baselines and show evidence of sim-to-real transfer. Our baselines achieve a 20% success rate in the real world; our experiments identify ways future research work improve performance. See videos on our website: https://ovmm.github.io/.
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Cerebral Microbleeds (CMBs) are chronic deposits of small blood products in the brain tissues, which have explicit relation to various cerebrovascular diseases depending on their anatomical location, including cognitive decline, intracerebral hemorrhage, and cerebral infarction. However, manual detection of CMBs is a time-consuming and error-prone process because of their sparse and tiny structural properties. The detection of CMBs is commonly affected by the presence of many CMB mimics that cause a high false-positive rate (FPR), such as calcification and pial vessels. This paper proposes a novel 3D deep learning framework that does not only detect CMBs but also inform their anatomical location in the brain (i.e., lobar, deep, and infratentorial regions). For the CMB detection task, we propose a single end-to-end model by leveraging the U-Net as a backbone with Region Proposal Network (RPN). To significantly reduce the FPs within the same single model, we develop a new scheme, containing Feature Fusion Module (FFM) that detects small candidates utilizing contextual information and Hard Sample Prototype Learning (HSPL) that mines CMB mimics and generates additional loss term called concentration loss using Convolutional Prototype Learning (CPL). The anatomical localization task does not only tell to which region the CMBs belong but also eliminate some FPs from the detection task by utilizing anatomical information. The results show that the proposed RPN that utilizes the FFM and HSPL outperforms the vanilla RPN and achieves a sensitivity of 94.66% vs. 93.33% and an average number of false positives per subject (FPavg) of 0.86 vs. 14.73. Also, the anatomical localization task further improves the detection performance by reducing the FPavg to 0.56 while maintaining the sensitivity of 94.66%.
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Recent developments and the beginning market introduction of high-resolution imaging 4D (3+1D) radar sensors have initialized deep learning-based radar perception research. We investigate deep learning-based models operating on radar point clouds for 3D object detection. 3D object detection on lidar point cloud data is a mature area of 3D vision. Many different architectures have been proposed, each with strengths and weaknesses. Due to similarities between 3D lidar point clouds and 3+1D radar point clouds, those existing 3D object detectors are a natural basis to start deep learning-based 3D object detection on radar data. Thus, the first step is to analyze the detection performance of the existing models on the new data modality and evaluate them in depth. In order to apply existing 3D point cloud object detectors developed for lidar point clouds to the radar domain, they need to be adapted first. While some detectors, such as PointPillars, have already been adapted to be applicable to radar data, we have adapted others, e.g., Voxel R-CNN, SECOND, PointRCNN, and PV-RCNN. To this end, we conduct a cross-model validation (evaluating a set of models on one particular data set) as well as a cross-data set validation (evaluating all models in the model set on several data sets). The high-resolution radar data used are the View-of-Delft and Astyx data sets. Finally, we evaluate several adaptations of the models and their training procedures. We also discuss major factors influencing the detection performance on radar data and propose possible solutions indicating potential future research avenues.
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Quantitative organ assessment is an essential step in automated abdominal disease diagnosis and treatment planning. Artificial intelligence (AI) has shown great potential to automatize this process. However, most existing AI algorithms rely on many expert annotations and lack a comprehensive evaluation of accuracy and efficiency in real-world multinational settings. To overcome these limitations, we organized the FLARE 2022 Challenge, the largest abdominal organ analysis challenge to date, to benchmark fast, low-resource, accurate, annotation-efficient, and generalized AI algorithms. We constructed an intercontinental and multinational dataset from more than 50 medical groups, including Computed Tomography (CT) scans with different races, diseases, phases, and manufacturers. We independently validated that a set of AI algorithms achieved a median Dice Similarity Coefficient (DSC) of 90.0\% by using 50 labeled scans and 2000 unlabeled scans, which can significantly reduce annotation requirements. The best-performing algorithms successfully generalized to holdout external validation sets, achieving a median DSC of 89.5\%, 90.9\%, and 88.3\% on North American, European, and Asian cohorts, respectively. They also enabled automatic extraction of key organ biology features, which was labor-intensive with traditional manual measurements. This opens the potential to use unlabeled data to boost performance and alleviate annotation shortages for modern AI models.
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