|
--- |
|
license: apache-2.0 |
|
language: |
|
- en |
|
|
|
|
|
|
|
tags: |
|
- pubmed |
|
- medical |
|
- medicine |
|
- NIH |
|
- science |
|
pretty_name: dataclysm-arxiv |
|
size_categories: |
|
- 10M<n<100M |
|
--- |
|
|
|
# DATACLYSM PATCH 0.0.4: PUBMED |
|
## USE THE NOTEBOOK TO GET STARTED! |
|
https://github.com/somewheresystems/dataclysm |
|
|
|
# somewheresystems/dataclysm-pubmed |
|
|
|
This dataset comprises of 35.7 million PubMed metadata entries including title and some (~69% with) abstracts, with two new columns added: title-embeddings and abstract-embeddings. These additional columns were generated using the bge-small-en-v1.5 embeddings model. The dataset was sourced from the PubMed Baseline as of December 12, 2023. https://ftp.ncbi.nlm.nih.gov/pubmed/baseline/ |
|
|
|
# Embeddings Model |
|
|
|
We used https://huggingface.co/BAAI/bge-small-en-v1.5 to embed the `title` and `abstract` fields. |
|
|
|
## Contact |
|
|
|
Please contact [email protected] for inquiries. |