diff --git a/geopandas/tools/clip.py b/geopandas/tools/clip.py
index 8a1d6d1e..da76e0f2 100644
--- a/geopandas/tools/clip.py
+++ b/geopandas/tools/clip.py
@@ -66,7 +66,7 @@ def _clip_line_poly(gdf, poly):
     # Clip the data with the polygon
     if isinstance(gdf_sub, GeoDataFrame):
         clipped = gdf_sub.copy()
-        clipped["geometry"] = gdf_sub.intersection(poly)
+        clipped[gdf.geometry.name] = gdf_sub.intersection(poly)
     else:
         # GeoSeries
         clipped = gdf_sub.intersection(poly)

BUG: the clip function don't take dynamically the geometry column name  
Hi, today i noticed that the clip function didn't work for me but then i found which was the problem.

Import geodataframes with geometry called "WKT":
```
field_map = pd.read_csv('./field_map.csv')
field_map['WKT'] = field_map['WKT'].apply(wkt.loads)
field_map = gpd.GeoDataFrame(field_map, geometry = 'WKT', crs = {'init': 'epsg:4326'})

print(field_map.columns)

boundary_map = pd.read_csv('./boundary_map.csv')
boundary_map['WKT'] = boundary_map['WKT'].apply(wkt.loads)
boundary_map = gpd.GeoDataFrame(boundary_map, geometry = 'WKT', crs = {'init': 'epsg:4326'})

print(boundary_map.columns)

> Index(['Unnamed: 0', 'IDX', 'Value', 'WKT', 'WKTTypeID', 'IDXmaster'], dtype='object')
> Index(['Unnamed: 0', 'WKT'], dtype='object')

```
Clip the map and plot to validate:
```
clip_map = gpd.clip(field_map, boundary_map)

fig, ax = plt.subplots(figsize=(10,10))
clip_map.plot(ax=ax)
boundary_map.geometry.boundary.plot(ax=ax, color='red')
```
![image](https://user-images.githubusercontent.com/25191329/89591504-baa2b580-d820-11ea-84b0-3f5b41577ef2.png)

it seems that the clip has not worked but if we look at the of clip_map columns we see "WKT" and "geometry"

![image](https://user-images.githubusercontent.com/25191329/89591734-52080880-d821-11ea-8d30-ccb5f95e5f33.png)


**SOLUTION:**
This worked for me, renaming the geometry column as "geometry"

```
field_map = field_map.rename_geometry('geometry')
boundary_map = boundary_map.rename_geometry('geometry')

clip_map = gpd.clip(field_map, boundary_map)

fig, ax = plt.subplots(figsize=(10,10))
clip_map.plot(ax=ax)
boundary_map.geometry.boundary.plot(ax=ax, color='red')
```

![image](https://user-images.githubusercontent.com/25191329/89591886-ba56ea00-d821-11ea-8961-e39db3c8a4c1.png)

The clip function now work correctly
Regards


diff --git a/geopandas/tools/tests/test_clip.py b/geopandas/tools/tests/test_clip.py
index 40abaa04..328bc92f 100644
--- a/geopandas/tools/tests/test_clip.py
+++ b/geopandas/tools/tests/test_clip.py
@@ -203,6 +203,20 @@ def test_clip_points(point_gdf, single_rectangle_gdf):
     assert_geodataframe_equal(clip_pts, exp)
 
 
+def test_clip_points_geom_col_rename(point_gdf, single_rectangle_gdf):
+    """Test clipping a points GDF with a generic polygon geometry."""
+    point_gdf_geom_col_rename = point_gdf.rename_geometry("geometry2")
+    clip_pts = clip(point_gdf_geom_col_rename, single_rectangle_gdf)
+    pts = np.array([[2, 2], [3, 4], [9, 8]])
+    exp = GeoDataFrame(
+        [Point(xy) for xy in pts],
+        columns=["geometry2"],
+        crs="EPSG:4326",
+        geometry="geometry2",
+    )
+    assert_geodataframe_equal(clip_pts, exp)
+
+
 def test_clip_poly(buffered_locations, single_rectangle_gdf):
     """Test clipping a polygon GDF with a generic polygon geometry."""
     clipped_poly = clip(buffered_locations, single_rectangle_gdf)
@@ -210,6 +224,16 @@ def test_clip_poly(buffered_locations, single_rectangle_gdf):
     assert all(clipped_poly.geom_type == "Polygon")
 
 
+def test_clip_poly_geom_col_rename(buffered_locations, single_rectangle_gdf):
+    """Test clipping a polygon GDF with a generic polygon geometry."""
+
+    poly_gdf_geom_col_rename = buffered_locations.rename_geometry("geometry2")
+    clipped_poly = clip(poly_gdf_geom_col_rename, single_rectangle_gdf)
+    assert len(clipped_poly.geometry) == 3
+    assert "geometry" not in clipped_poly.keys()
+    assert "geometry2" in clipped_poly.keys()
+
+
 def test_clip_poly_series(buffered_locations, single_rectangle_gdf):
     """Test clipping a polygon GDF with a generic polygon geometry."""
     clipped_poly = clip(buffered_locations.geometry, single_rectangle_gdf)

environment.yml
pip install -e .
parse_log_pytest
environment.yml
pytest
3.9
pytest --no-header -rA --tb=line --color=no -p no:cacheprovider -W ignore::DeprecationWarning
attrs @ file:///home/conda/feedstock_root/build_artifacts/attrs_1741918516150/work
black @ file:///home/conda/feedstock_root/build_artifacts/black-recipe_1742502760723/work
Brotli @ file:///home/conda/feedstock_root/build_artifacts/brotli-split_1648883617327/work
certifi @ file:///home/conda/feedstock_root/build_artifacts/certifi_1739515848642/work/certifi
cffi @ file:///home/conda/feedstock_root/build_artifacts/cffi_1636046055389/work
cfgv @ file:///home/conda/feedstock_root/build_artifacts/cfgv_1734267080977/work
charset-normalizer @ file:///home/conda/feedstock_root/build_artifacts/charset-normalizer_1735929714516/work
click @ file:///home/conda/feedstock_root/build_artifacts/click_1734858813237/work
click-plugins @ file:///home/conda/feedstock_root/build_artifacts/click-plugins_1733731077999/work
cligj @ file:///home/conda/feedstock_root/build_artifacts/cligj_1733749956636/work
codecov @ file:///home/conda/feedstock_root/build_artifacts/codecov_1734975286850/work
colorama @ file:///home/conda/feedstock_root/build_artifacts/colorama_1733218098505/work
contourpy @ file:///home/conda/feedstock_root/build_artifacts/contourpy_1652954513473/work
coverage @ file:///home/conda/feedstock_root/build_artifacts/coverage_1743381221492/work
cycler @ file:///home/conda/feedstock_root/build_artifacts/cycler_1733332471406/work
descartes @ file:///home/conda/feedstock_root/build_artifacts/descartes_1734602598660/work
distlib @ file:///home/conda/feedstock_root/build_artifacts/distlib_1733238395481/work
exceptiongroup @ file:///home/conda/feedstock_root/build_artifacts/exceptiongroup_1733208806608/work
filelock @ file:///home/conda/feedstock_root/build_artifacts/filelock_1741969488311/work
Fiona==1.8.20
fonttools @ file:///home/conda/feedstock_root/build_artifacts/fonttools_1651017733844/work
GDAL==3.3.2
geographiclib @ file:///home/conda/feedstock_root/build_artifacts/geographiclib_1734342349249/work
-e git+https://github.com/geopandas/geopandas.git@0b804ea8afc9cf743643016048c65c8b07818af8#egg=geopandas
geopy @ file:///home/conda/feedstock_root/build_artifacts/geopy_1734341931581/work
greenlet @ file:///home/conda/feedstock_root/build_artifacts/greenlet_1648882382645/work
h2 @ file:///home/conda/feedstock_root/build_artifacts/h2_1738578511449/work
hpack @ file:///home/conda/feedstock_root/build_artifacts/hpack_1737618293087/work
hyperframe @ file:///home/conda/feedstock_root/build_artifacts/hyperframe_1737618333194/work
identify @ file:///home/conda/feedstock_root/build_artifacts/identify_1741502659866/work
idna @ file:///home/conda/feedstock_root/build_artifacts/idna_1733211830134/work
importlib_resources @ file:///home/conda/feedstock_root/build_artifacts/importlib_resources_1736252299705/work
iniconfig @ file:///home/conda/feedstock_root/build_artifacts/iniconfig_1733223141826/work
kiwisolver @ file:///home/conda/feedstock_root/build_artifacts/kiwisolver_1648854392795/work
matplotlib @ file:///croot/matplotlib-suite_1713336378214/work
munch @ file:///home/conda/feedstock_root/build_artifacts/munch_1734441240299/work
munkres==1.1.4
mypy_extensions @ file:///home/conda/feedstock_root/build_artifacts/mypy_extensions_1733230897951/work
nodeenv @ file:///home/conda/feedstock_root/build_artifacts/nodeenv_1734112117269/work
numpy @ file:///home/conda/feedstock_root/build_artifacts/numpy_1651020388495/work
olefile @ file:///home/conda/feedstock_root/build_artifacts/olefile_1734769783178/work
packaging @ file:///home/conda/feedstock_root/build_artifacts/packaging_1733203243479/work
pandas==1.4.2
pathspec @ file:///home/conda/feedstock_root/build_artifacts/pathspec_1733233363808/work
Pillow @ file:///home/conda/feedstock_root/build_artifacts/pillow_1630696601414/work
platformdirs @ file:///home/conda/feedstock_root/build_artifacts/bld/rattler-build_platformdirs_1742485085/work
pluggy @ file:///home/conda/feedstock_root/build_artifacts/pluggy_1733222765875/work
pre_commit @ file:///home/conda/feedstock_root/build_artifacts/pre-commit_1742475552107/work
psycopg2 @ file:///home/conda/feedstock_root/build_artifacts/psycopg2-split_1636701485031/work
pycparser @ file:///home/conda/feedstock_root/build_artifacts/bld/rattler-build_pycparser_1733195786/work
pyparsing @ file:///home/conda/feedstock_root/build_artifacts/pyparsing_1652235407899/work
pyproj @ file:///home/conda/feedstock_root/build_artifacts/pyproj_1650803091911/work
PyQt5==5.12.3
PyQt5_sip==4.19.18
PyQtChart==5.12
PyQtWebEngine==5.12.1
PySocks @ file:///home/conda/feedstock_root/build_artifacts/pysocks_1733217236728/work
pytest @ file:///home/conda/feedstock_root/build_artifacts/pytest_1740946542080/work
pytest-cov @ file:///home/conda/feedstock_root/build_artifacts/pytest-cov_1733223023082/work
python-dateutil @ file:///home/conda/feedstock_root/build_artifacts/python-dateutil_1733215673016/work
pytz @ file:///home/conda/feedstock_root/build_artifacts/pytz_1742920838005/work
PyYAML @ file:///home/conda/feedstock_root/build_artifacts/pyyaml_1648757097602/work
requests @ file:///home/conda/feedstock_root/build_artifacts/requests_1733217035951/work
rtree @ file:///home/conda/feedstock_root/build_artifacts/rtree_1741378561624/work
Shapely @ file:///home/conda/feedstock_root/build_artifacts/shapely_1635194355088/work
six @ file:///home/conda/feedstock_root/build_artifacts/six_1733380938961/work
SQLAlchemy @ file:///home/conda/feedstock_root/build_artifacts/sqlalchemy_1651017976253/work
toml @ file:///home/conda/feedstock_root/build_artifacts/toml_1734091811753/work
tomli @ file:///home/conda/feedstock_root/build_artifacts/tomli_1733256695513/work
tornado @ file:///home/conda/feedstock_root/build_artifacts/tornado_1648827245914/work
typing_extensions @ file:///home/conda/feedstock_root/build_artifacts/bld/rattler-build_typing_extensions_1743201626/work
ukkonen @ file:///home/conda/feedstock_root/build_artifacts/ukkonen_1649407036294/work
unicodedata2 @ file:///home/conda/feedstock_root/build_artifacts/unicodedata2_1649111919389/work
urllib3 @ file:///home/conda/feedstock_root/build_artifacts/urllib3_1734859416348/work
virtualenv @ file:///home/conda/feedstock_root/build_artifacts/virtualenv_1741337798015/work
zipp @ file:///home/conda/feedstock_root/build_artifacts/zipp_1732827521216/work
zstandard @ file:///croot/zstandard_1677013143055/work

name: geopandas
channels:
  - defaults
  - https://repo.anaconda.com/pkgs/main
  - https://repo.anaconda.com/pkgs/r
  - conda-forge
dependencies:
  - _libgcc_mutex=0.1=main
  - _openmp_mutex=5.1=1_gnu
  - alsa-lib=1.2.3.2=h166bdaf_0
  - attrs=25.3.0=pyh71513ae_0
  - black=25.1.0=pyha5154f8_0
  - boost-cpp=1.74.0=h312852a_4
  - brotli=1.0.9=h166bdaf_7
  - brotli-bin=1.0.9=h166bdaf_7
  - brotli-python=1.0.9=py39h5a03fae_7
  - bzip2=1.0.8=h7f98852_4
  - c-ares=1.18.1=h7f98852_0
  - ca-certificates=2025.2.25=h06a4308_0
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  - cfitsio=3.470=hb418390_7
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  - click=8.1.8=pyh707e725_0
  - click-plugins=1.1.1=pyhd8ed1ab_1
  - cligj=0.7.2=pyhd8ed1ab_2
  - codecov=2.1.13=pyhd8ed1ab_1
  - colorama=0.4.6=pyhd8ed1ab_1
  - contourpy=1.0.2=py39hf939315_2
  - coverage=7.8.0=pyhe1237c8_0
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  - dbus=1.13.6=h48d8840_2
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  - jbig=2.1=h7f98852_2003
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  - krb5=1.19.3=h3790be6_0
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  - ld_impl_linux-64=2.40=h12ee557_0
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  - python=3.9.7=hb7a2778_3_cpython
  - python-dateutil=2.9.0.post0=pyhff2d567_1
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  - sqlalchemy=1.4.36=py39hb9d737c_0
  - sqlite=3.45.3=h5eee18b_0
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  - typing_extensions=4.13.0=pyh29332c3_1
  - tzcode=2022a=h166bdaf_0
  - tzdata=2025a=h04d1e81_0
  - ukkonen=1.0.1=py39hf939315_2
  - unicodedata2=14.0.0=py39hb9d737c_1
  - urllib3=2.3.0=pyhd8ed1ab_0
  - virtualenv=20.29.3=pyhd8ed1ab_0
  - wheel=0.45.1=py39h06a4308_0
  - xerces-c=3.2.3=h9d8b166_3
  - xorg-kbproto=1.0.7=h7f98852_1002
  - xorg-libice=1.0.10=h7f98852_0
  - xorg-libsm=1.2.3=hd9c2040_1000
  - xorg-libx11=1.7.2=h7f98852_0
  - xorg-libxau=1.0.9=h7f98852_0
  - xorg-libxdmcp=1.1.3=h7f98852_0
  - xorg-libxext=1.3.4=h7f98852_1
  - xorg-libxrender=0.9.10=h7f98852_1003
  - xorg-renderproto=0.11.1=h7f98852_1002
  - xorg-xextproto=7.3.0=h7f98852_1002
  - xorg-xproto=7.0.31=h7f98852_1007
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  - yaml=0.2.5=h7f98852_2
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  - zstandard=0.19.0=py39h5eee18b_0
  - zstd=1.5.0=ha95c52a_0
prefix: /opt/conda/envs/geopandas

geopandas/tools/tests/test_clip.py::test_clip_poly_geom_col_rename
geopandas/tools/tests/test_clip.py::test_not_gdf geopandas/tools/tests/test_clip.py::test_returns_gdf geopandas/tools/tests/test_clip.py::test_returns_series geopandas/tools/tests/test_clip.py::test_non_overlapping_geoms geopandas/tools/tests/test_clip.py::test_clip_points geopandas/tools/tests/test_clip.py::test_clip_points_geom_col_rename geopandas/tools/tests/test_clip.py::test_clip_poly geopandas/tools/tests/test_clip.py::test_clip_poly_series geopandas/tools/tests/test_clip.py::test_clip_multipoly_keep_slivers geopandas/tools/tests/test_clip.py::test_clip_multipoly_keep_geom_type geopandas/tools/tests/test_clip.py::test_clip_single_multipoly_no_extra_geoms geopandas/tools/tests/test_clip.py::test_clip_multiline geopandas/tools/tests/test_clip.py::test_clip_multipoint geopandas/tools/tests/test_clip.py::test_clip_lines geopandas/tools/tests/test_clip.py::test_clip_with_multipolygon geopandas/tools/tests/test_clip.py::test_mixed_geom geopandas/tools/tests/test_clip.py::test_mixed_series geopandas/tools/tests/test_clip.py::test_clip_warning_no_extra_geoms geopandas/tools/tests/test_clip.py::test_clip_with_polygon geopandas/tools/tests/test_clip.py::test_clip_with_line_extra_geom geopandas/tools/tests/test_clip.py::test_clip_line_keep_slivers geopandas/tools/tests/test_clip.py::test_clip_no_box_overlap geopandas/tools/tests/test_clip.py::test_clip_box_overlap geopandas/tools/tests/test_clip.py::test_warning_extra_geoms_mixed geopandas/tools/tests/test_clip.py::test_warning_geomcoll geopandas/tools/tests/test_clip.py::test_warning_crs_mismatch
geopandas/tools/clip.py
geopandas/tools/clip.py