output
stringlengths 926
21.5k
| instruction
stringlengths 45
1.08k
|
|---|---|
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>De-Identified C@17:18:46</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>De-Identified CT Reports</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\De-Identified CT Reports\</item_key>
<item_icon>LAE</item_icon>
<tooltip>\ i2b2 \ Reports \ De-Identified CT Reports \</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all de-identified CT reports in the i2b2 repository with any timing and specificity, using the panel 1 with an accuracy scale of 100, and the item name is "De-Identified CT Reports", located at the path "i2b2\Reports\De-Identified CT Reports". This query is not inverted and has a total of one item occurrence. The class is ENC and it is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:37:38</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database at any time with a specificity scale of 0, a panel timing of ANY, an accuracy scale of 100, and a total of 1 item occurrence, with the item being "Diagnoses" from the i2b2_DIAG category, classified as an ENC (Encounter) and not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:43:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with no specificity or timing constraints, and with a high level of accuracy, displaying the results in a panel labeled "Diagnoses" using the icon "FA". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:45:40</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with a specificity scale of 0, panel timing set to ANY, a panel accuracy scale of 100, and only one item occurrence. The query should include the Diagnoses element with the key \\i2b2_DIAG\i2b2\Diagnoses\ and the class set to ENC. The query should not be a synonym and has a query name of "Diagnoses@1:45:40" and a query timing of ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:51:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with an accuracy scale of 100% and a specificity scale of 0, regardless of the timing, and the query should be named "Diagnoses@1:51:21". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Insul@14:13:56</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>Insulin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME148) hormones\(LME150) antidiabetic agents\(LME152) insulin\insulin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ hormones \ antidiabetic agents \ insulin \ insulin</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with Essential hypertension, Diabetes mellitus, and have a record of being prescribed Insulin medication. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diagn-Antin-Anti-@19:09:11</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Diagnostic and nonsurgical procedures</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\PRC\ICD9 (Inpatient)\(87-99) Diagnostic and nonsurgical procedures\</item_key>
<item_icon>FA</item_icon>
<tooltip>Procedures \ ICD9 (Inpatient) \ Diagnostic and nonsurgical procedures</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Antineoplastics</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME55) antineoplastics\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ antineoplastics</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Anti-infectives</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have had Diagnostic and nonsurgical procedures (ICD9 codes 87-99) in the inpatient setting and have been prescribed Antineoplastics (LME5) and Anti-infectives (LME10) medications, with no specific timing requirements for the occurrence of these events. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:46:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a specificity scale of 0, any timing, and a panel accuracy scale of 100, with the query named "Diagnoses@1:46:59" and panel number 1, where the item name is "Diagnoses" and the item key is "\\i2b2_DIAG\i2b2\Diagnoses\", with a tooltip of "Diagnoses" and the class being "ENC". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:54:14</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with no specific timeframe or accuracy level specified, and without any inversion of the results. The query will search for the term "Diagnoses" under the category "i2b2_DIAG\i2b2\Diagnoses\" and display it using the ENC (Encounter) class. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:57:04</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a high level of specificity (1000%) and no time constraint, where the query is named "Diagnoses@1:57:04" and the panel number is 1, with no inversion of the data. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@12:01:36</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database at any time with a specificity scale of 0 and an accuracy scale of 100, with a single item occurrence and no synonyms used, using the "Diagnoses" panel with the key "\\i2b2_DIAG\i2b2\Diagnoses\". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@12:18:01</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a specificity scale of 0 and an accuracy scale of 100, with no inversion, and the query should include a single panel with any timing. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Female-Male@20:16:08</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Single</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Single\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Single</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Single</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Single\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Single</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find female patients with a marital status of single who have been diagnosed with mental disorders, and male patients with a marital status of single who have been diagnosed with mental disorders. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>HGB A1C (LOINC:@18:23:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>HGB A1C (LOINC:4548-4)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\Hemoglobin\GHBA1C\LOINC:4548-4\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Hemoglobin \ GHBA1C (Group:GHBA1C) \ Hgb a1c (LOINC:4548-4)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>6</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of Hemoglobin A1C (HGB A1C) laboratory tests (LOINC:4548-4) with a value greater than 6% within any timeframe, grouped under the GHBA1C panel, with a specificity scale of 0 and an accuracy scale of 100, and displayed as an ENC class with a tooltip indicating "Labtests \ Chemistry \ Hemoglobin \ GHBA1C (Group:GHBA1C) \ Hgb a1c (LOINC:4548-4)". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@12:22:29</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with no specific time constraint, using a 100% accuracy scale, and considering only the primary diagnosis (hlevel 1), with no inversion of the results, and the query should return a single panel of results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@12:23:24</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a specificity scale of 0, a panel timing of ANY, an accuracy scale of 100, and a total item occurrence of 1. This query will return a single panel with the item name "Diagnoses" and the key "\\i2b2_DIAG\i2b2\Diagnoses\" as a synonym, and the icon FA. The query has a query name of "Diagnoses@12:23:24" and a query timing of ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@12:24:33</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any timing and 100% accuracy scale, using the "Diagnoses" item from the "i2b2_DIAG\i2b2\Diagnoses" key, with a specificity scale of 0 and panel number 1. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@12:26:46</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a specificity scale of 0 and a panel accuracy scale of 100, displaying the results in panel 1, where the data was collected at any time (ANY timing). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@13:20:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any specificity, at any time, with a total occurrence of 1, using the "Diagnoses" panel with a class of ENC and a specificity scale of 0. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 18--Princ-HMG-C@15:30:39</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 55-64 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 65-74 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\65-74 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 65-74 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 75-84 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\75-84 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 75-84 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 85 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 85 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 85 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Mixed hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-2) Mixed hyperlipidemia\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Mixed hyperlipidemia</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Other and unspecified hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>HMG-CoA reductase inhibitors</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME5) antihyperlipidemic agents\(LME8) HMG-CoA reductase inhibitors\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ antihyperlipidemic agents \ hmg-coa reductase inhibitors</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients who are 555-64 years old, 65-74 years old, or 75-84 years old, with a diagnosis of mixed hyperlipidemia or other unspecified hyperlipidemia, and have been prescribed HMG-CoA reductase inhibitors as medication, regardless of the time frame for any of these factors. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Insul@14:14:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>Insulin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME148) hormones\(LME150) antidiabetic agents\(LME152) insulin\insulin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ hormones \ antidiabetic agents \ insulin \ insulin</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension and diabetes mellitus who have been prescribed insulin medication. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@12:25:11</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any timing and a specificity scale of 0, using a panel with 100% accuracy and a single item occurrence, focusing on the item "Diagnoses" with the key "\\i2b2_DIAG\i2b2\Diagnoses\" and a class of ENC. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@13:20:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any specificity, at any time, and with a high level of accuracy (1000%), including only one occurrence of the diagnoses item in the query panel, and with no synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@14:06:16</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any specificity, accuracy, and timing, using the panel named "Diagnoses" with the item key "\\i2b2_DIAG\i2b2\Diagnoses\" and an icon of "FA". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>16 years old@15:14:55</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>16 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\16 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 16 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>17 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\17 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 17 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>55 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\55 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 55 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>56 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\56 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 56 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>57 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\57 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 57 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>58 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\58 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 58 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>59 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\59 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 59 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>60 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\60 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 60 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Living</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Vital Status\Living\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Vital Status \ Living</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>5</hlevel>
<item_name>Acute pancreatitis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Digestive system (520-579)\Other diseases of digestive system (570-579)\(577) Diseases of pancreas\(577-0) Acute pancreatitis\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Digestive system \ Other diseases of digestive system \ Diseases of pancreas \ Acute pancreatitis</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Digestive system (520-579)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with the following demographics: age between 0-17 years old, 18-24 years old, 25-34 years old, 35-44 years old, 45-54 years old, 555-64 years old, and living status, and diagnosed with acute pancreatitis as their principal diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Living-16 year@15:17:00</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Living</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Vital Status\Living\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Vital Status \ Living</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>16 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\16 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 16 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>17 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\17 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 17 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients who are currently living and are between the ages of 16 and 17 years old or 18 to 34 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit Diagnosis@19:08:06</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the digestive system (k00-k94)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(K00-K94) Dise~rl1r\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the digestive system (k00-k94)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Admit Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(K00-K94) Dise~rl1r\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to diseases of the digestive system (ICD10 codes K00-K94) that were recorded as the patient's admit diagnosis, with a specificity scale of 0, a panel accuracy scale of 100, and a timing set to ANY, within a single panel of the query. The query should be named "Admit Diagnosis@19:08:06" and the tooltip should read "Diagnoses - Diseases of the digestive system (k0-k94)". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 65--Endoc-Endoc@14:03:57</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 65-74 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\65-74 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 65-74 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 75-84 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\75-84 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 75-84 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 85 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 85 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 85 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Endocrine disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Endocrine, nutritional and metabolic diseases (e00-e89)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who are 65 years or older with endocrine disorders, specifically those aged 65-74, 75-84, or 85 years and older, and who have been diagnosed with any endocrine, nutritional, or metabolic diseases (ICD-9 codes E0-E89). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@13:21:39</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with no specific time frame or accuracy level applied, and with the category being "Diagnoses" displayed as a panel item with a class of "ENC" and no synonyms applied. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@13:21:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database at any time with a high level of accuracy (1000%) and no specificity scale applied, including synonyms, with a single panel and no inversion applied. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 55--Endoc-Chemi@14:12:33</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 55-64 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 65-74 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\65-74 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 65-74 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 75-84 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\75-84 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 75-84 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 85 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 85 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 85 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Endocrine disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Chemistry</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with endocrine disorders (ICD-9 codes 240-259) who are 555-64 years old, 65-74 years old, 75-84 years old, or greater than or equal to 85 years old, and who have had a chemistry lab test performed on them. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Insul@14:15:39</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>Insulin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME148) hormones\(LME150) antidiabetic agents\(LME152) insulin\insulin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ hormones \ antidiabetic agents \ insulin \ insulin</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>0</hlevel>
<item_name>Patient Set for "Outpa-Prima-Diabe-Person_#1000000045@11:39:24"Patient setFINISHED</item_name>
<item_key>patient_set_coll_id:6485</item_key>
<tooltip>Patient Set for "Outpa-Prima-Diabe-Person_#1000000045@11:39:24"Patient setFINISHED</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension, diabetes mellitus, and who have been prescribed insulin medication within a specific time frame, using the panel named "Outpa-Prima-Diabe-Person_#100000045@1:39:24"Patient setFINISHED". The specificity scale is set to 0, indicating that the query will return all possible matches, and the accuracy scale is set to 100, meaning that all items must be present for a match to be returned. The query timing is set to ANY, meaning that there is no time restriction on when the diagnosis or medication occurred. The panel number and panel timing are also set to ANY, indicating that the query will search for these conditions at any point in time. The class is set to ENC, which stands for "encounter" and the item_is_synonym is set to false, meaning that the items are not synonyms. The hlevel and item_key values provide more specific information on where to search for the diagnoses and medication within the database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Hyp-Dis-CHO-Ant@14:20:20</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Hypertensive diseases (i10-i15)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\(I10-I15) Hype~5igm\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99) \ Hypertensive diseases (i10-i15)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Disorders of lipoprotein metabolism and other lipidemias</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>CHOLESTEROL (LOINC:2093-3)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB17) Lipid Tests\CHOL\LOINC:2093-3\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Lipid Tests \ Cholesterol (Group:CHOL) \ Cholesterol (LOINC:2093-3)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>200</value_constraint>
<value_unit_of_measure>mg/dl</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>4</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>1</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Antihyperlipidemic agents</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME5) antihyperlipidemic agents\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ antihyperlipidemic agents</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with hypertensive diseases (ICD-10 codes I10-I15), have disorders of lipoprotein metabolism and other lipidemias (ICD-9 codes E70-E88), have had a cholesterol test result greater than 20 mg/dl (LOINC code 2093-3), and have not taken any antihyperlipidemic agents (Medication class LME5). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Living-16 year@15:17:52</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Living</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Vital Status\Living\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Vital Status \ Living</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>16 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\16 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 16 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>17 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\17 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 17 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>55 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\55 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 55 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>56 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\56 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 56 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>57 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\57 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 57 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>58 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\58 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 58 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>59 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\59 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 59 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>60 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\60 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 60 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who are between the ages of 10 and 64 years old, including those who are 10, 111, 12, 13, 14, 15, 16, 17, 55, 6, 7, 8, 9, 10, 111, 12, 13, 14, 15, 16, 17, 55, 56, 57, 58, 59, and 60 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Livin-16 ye-Princ@15:19:05</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Living</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Vital Status\Living\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Vital Status \ Living</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>16 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\16 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 16 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>17 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\17 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old \ 17 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>55 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\55 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 55 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>56 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\56 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 56 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>57 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\57 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 57 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>58 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\58 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 58 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>59 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\59 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 59 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>60 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\60 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old \ 60 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>Acute pancreatitis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Digestive system (520-579)\Other diseases of digestive system (570-579)\(577) Diseases of pancreas\(577-0) Acute pancreatitis\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Digestive system \ Other diseases of digestive system \ Diseases of pancreas \ Acute pancreatitis</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Digestive system (520-579)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find the age range of patients who were diagnosed with acute pancreatitis as their principal diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 0-9 years old@15:22:05</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 0-9 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\0-9 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 0-9 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 10-17 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\10-17 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 10-17 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who are between the ages of 0-9 years old, 10-17 years old, 18-34 years old, and 35-44 years old, with a specificity scale of 0 and a panel timing of SAMEVISIT, and with a total of 1 item occurrence in the panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Incom-Menta-Disea@18:09:03</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Marital Status</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Marital Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Mental and behavioral disorders (f01-f99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(F01-F99) Ment~44ly\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental and behavioral disorders (f01-f99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the digestive system (k00-k94)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(K00-K94) Dise~rl1r\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the digestive system (k00-k94)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with diagnoses related to mental and behavioral disorders (ICD codes F01-F9) and diseases of the digestive system (ICD codes K0-K9), along with their demographic information such as income and marital status. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essenti-Diabete@14:16:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension (Essential hypertension) and diabetes mellitus (Diabetes mellitus) in the i2b2 database using the query builder. The specificity scale is set to 0, and the panel timing is set to ANY, meaning that the query will return all records containing either of these diagnoses, regardless of the time of diagnosis. The accuracy scale is set to 100, indicating a high level of accuracy in the search results. Both panels have a single item occurrence, and the query is not inverted. The hierarchy level (hlevel) is set to 4 for both items, and the class is set to ENC, which stands for Encounter. The tooltips provide a brief description of the location of the diagnoses within the database hierarchy: Diagnoses > Circulatory system > Hypertensive disease > Essential hypertension, and Diagnoses > Endocrine disorders > Other endocrine gland diseases > Diabetes mellitus. The query is named "Essenti-Diabete@14:1 |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Educa-Socio-Marit@18:13:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Education</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Education</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the circulatory system (i00-i99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the skin and subcutaneous tissue (l00-l99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(L00-L99) Dise~05o1\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the skin and subcutaneous tissue (l00-l99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Marital Status</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Marital Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Mental and behavioral disorders (f01-f99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(F01-F99) Ment~44ly\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental and behavioral disorders (f01-f99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with education information, socioeconomic status, and marital status, as well as those who have been diagnosed with diseases of the circulatory system, diseases of the skin and subcutaneous tissue, and mental and behavioral disorders. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 35-- 35-- 35-@18:29:33</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Low income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\Low income\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Income \ Low income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Symptoms involving digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\Symptoms (780-789)\(787) Symptoms involving digestiv~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions \ Symptoms \ Symptoms involving digestive system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Medium income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\Medium income\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Income \ Medium income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Symptoms involving digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\Symptoms (780-789)\(787) Symptoms involving digestiv~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions \ Symptoms \ Symptoms involving digestive system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>High income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\High income\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Income \ High income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Symptoms involving digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\Symptoms (780-789)\(787) Symptoms involving digestiv~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions \ Symptoms \ Symptoms involving digestive system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find encounters where the patient is between the ages of 35-44 years old, has a medium or high income, is married, and has a mental disorder with symptoms involving the digestive system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 18-- 35-- 45-@18:46:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Symptoms, signs, and ill-defined conditions</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Respiratory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Musculoskeletal and connective tissue</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Musculoskeletal and connective tissue (710-739)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Musculoskeletal and connective tissue</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Injury and poisoning</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Injury and poisoning (800-999)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Injury and poisoning</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Injury and poisoning</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Injury and poisoning (800-999)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Injury and poisoning</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Symptoms, signs, and ill-defined conditions</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Respiratory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Musculoskeletal and connective tissue</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Musculoskeletal and connective tissue (710-739)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Musculoskeletal and connective tissue</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Musculoskeletal and connective tissue</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Musculoskeletal and connective tissue (710-739)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Musculoskeletal and connective tissue</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Symptoms, signs, and ill-defined conditions</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Respiratory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Injury and poisoning</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Injury and poisoning (800-999)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Injury and poisoning</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients between the ages of 45-54 years old who have a principal diagnosis of symptoms, signs, and ill-defined conditions, and who have a diagnosis in the respiratory system or musculoskeletal and connective tissue categories, with an income level and race information included, and their age group, diagnoses, and demographics are all within the specified ranges. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-PATIE@14:30:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>PATIENT:HIVE:1000000045</item_name>
<item_key>PATIENT:HIVE:1000000045</item_key>
<tooltip>PATIENT:HIVE:1000000045</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension and diabetes mellitus, specifically looking at the endocrine disorders and circulatory system categories, and I also want to include a specific patient with the ID PATIENT:HIVE:100000045 in the search results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Perso@19:59:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Essential (primary) hypertension</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\(I10-I15) Hype~5igm\(I10) Essentia~sbwm\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99) \ Hypertensive diseases (i10-i15) \ Essential (primary) hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Person_#1000000045</item_name>
<item_key>masterid:8542</item_key>
<tooltip>Person_#1000000045</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find a query that identifies patients with essential (primary) hypertension (I10) and diabetes mellitus (E08-E13) in their diagnoses, with a specificity scale of 0 and accuracy scale of 100, for any time period, and limited to a specific person with the master ID 8522. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 35-- 35-- 35-@18:34:25</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Low income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\Low income\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Income \ Low income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Symptoms involving digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\Symptoms (780-789)\(787) Symptoms involving digestiv~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions \ Symptoms \ Symptoms involving digestive system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Medium income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\Medium income\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Income \ Medium income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Symptoms involving digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\Symptoms (780-789)\(787) Symptoms involving digestiv~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions \ Symptoms \ Symptoms involving digestive system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>High income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\High income\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Income \ High income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Symptoms involving digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\Symptoms (780-789)\(787) Symptoms involving digestiv~\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions \ Symptoms \ Symptoms involving digestive system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who are between the ages of 35 and 444, have a high income, are married, have been diagnosed with a mental disorder, and have symptoms involving the digestive system, with the age range being 45-54 or 65 and above. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name> 18-- 35-- 45-@18:39:48</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Symptoms, signs, and ill-defined conditions</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Respiratory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Injury and poisoning</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Injury and poisoning (800-999)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Injury and poisoning</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Symptoms, signs, and ill-defined conditions</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Musculoskeletal and connective tissue</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Musculoskeletal and connective tissue (710-739)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Musculoskeletal and connective tissue</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Symptoms, signs, and ill-defined conditions</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Symptoms, signs, and ill-defined conditions</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Symptoms, signs, and ill-defined conditions (780-799)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients between the ages of 35-54, who have an income level, and a principal diagnosis of symptoms, signs, and ill-defined conditions (ICD-9 codes 780-79) related to musculoskeletal and connective tissue disorders (ICD-9 codes 710-739). Additionally, I want to analyze the distribution of these patients based on their race and age group. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:26:42</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses in the i2b2 database with any timing and specificity, using the Diagnoses panel with an accuracy scale of 100, and displaying only the first panel with no inversion, and with a single occurrence of the Diagnoses item, which is of the ENC class and is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:29:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with no specific timeframe or accuracy requirements, and with the term "Diagnoses" displayed in the user interface. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Perso@14:31:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Person_#1000000045</item_name>
<item_key>masterid:3740</item_key>
<tooltip>Person_#1000000045</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension and diabetes mellitus, with a specificity scale of 0 and any timing, and who are associated with the person ID 100000045. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabetes mellit@01:58:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of diabetes mellitus diagnoses in the i2b2 database, with any level of specificity and accuracy, using the Endocrine disorders > Other endocrine gland diseases > Diabetes mellitus category hierarchy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Female@20:17:50</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find female patients who are 20-70 years old with a mental disorder diagnosis and are married. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Aralen -Metroni@21:23:54</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>Aralen Hydrochloride 50 mg/ml solution Sanofi Winthrop Pharmaceuticals</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME11) amebicides\chloroquine\00024007401\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ amebicides \ chloroquine \ aralen hydrochloride 50 mg/ml solution sanofi winthrop pharmaceuticals</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Metronidazole</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\(LME11) amebicides\metronidazole\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives \ amebicides \ metronidazole</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who have taken Aralen Hydrochloride 50 mg/ml solution by Sanofi Winthrop Pharmaceuticals (an anti-infective and amebicide medication) and Metronidazole (another anti-infective and amebicide medication) at any time, with a specificity scale of 0 and accuracy scale of 100. The query will look for these medications within the i2b2 Medications category, under the Anti-infectives subcategory, and the Amebicides sub-subcategory. The query will not include synonyms for these medications. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Adrenal cortica@21:24:52</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Adrenal cortical steroids</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME148) hormones\(LME149) adrenal cortical steroids\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ hormones \ adrenal cortical steroids</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find any patient who has taken adrenal cortical steroids as a medication, with a specificity scale of 0, a panel timing of ANY, an accuracy scale of 100, and a total of 1 item occurrence in the panel, using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Endocrine disor@21:27:07</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Endocrine disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of Endocrine disorders (ICD codes 240-259) in the i2b2 database, regardless of the timing, with a specificity scale of 0 and an accuracy scale of 100, and the query should be applied to the first panel of the analysis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essenti-Diabete@14:32:46</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension (ICD-9-CM code 401) and diabetes mellitus (ICD-9-CM code 250) with no specific timing or accuracy requirements, and without inverting the results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Female@20:26:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all female patients who have been diagnosed with any mental disorder, and who are currently married, with no specific time constraint. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Female-Female@20:28:24</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Psychosis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\Psychosis (290-299)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders \ Psychosis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Divorced</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Divorced\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Divorced</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Psychosis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\Psychosis (290-299)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders \ Psychosis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find female patients with a diagnosis of psychosis who are either married or divorced. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Female-Female@20:34:30</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Mental and behavioral disorders (f01-f99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(F01-F99) Ment~44ly\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental and behavioral disorders (f01-f99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Single</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Single\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Single</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Mental and behavioral disorders (f01-f99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(F01-F99) Ment~44ly\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental and behavioral disorders (f01-f99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find female patients with a diagnosis of mental and behavioral disorders (ICD-9 codes F01-F9) who are either married or single, regardless of the timing of their visit. The query is divided into two panels, with the first panel including married females and the second panel including single females. The specificity scale is set to 0, indicating that all occurrences of the items in the query should be considered. The panel accuracy scale is set to 100, meaning that all items in the panel must be true for the patient to be included in the query. The class is set to ENC, which stands for "Encounter" and the item is not a synonym. The query is designed to capture all female patients with a diagnosis of mental and behavioral disorders, regardless of their marital status. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diseases of the@21:28:56</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the skin and subcutaneous tissue (l00-l99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(L00-L99) Dise~05o1\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the skin and subcutaneous tissue (l00-l99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find diagnoses related to diseases of the skin and subcutaneous tissue, specifically within the ICD-10 and ICD-9 codes ranging from L0 to L9, with a specificity scale of 0 and an accuracy scale of 100, including only one item on the panel, and with the panel timing set to ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>HGB A1C (LOINC:@18:23:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>HGB A1C (LOINC:4548-4)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\Hemoglobin\GHBA1C\LOINC:4548-4\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Hemoglobin \ GHBA1C (Group:GHBA1C) \ Hgb a1c (LOINC:4548-4)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>7</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a hemoglobin A1C (Hgb A1C) result that is greater than 7% (LOINC code: 4548-4) within any timeframe, with a high level of specificity and accuracy, and display it in a panel with a single item. The result should be constrained by the value and displayed using the Encounter (ENC) class. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>CT Reports@21:25:48</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>CT Reports</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\CT Reports\</item_key>
<item_icon>LAE</item_icon>
<tooltip>i2b2 \ Reports \ CT Reports</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all CT Reports in the i2b2 Reports folder with a specificity scale of 0 and a panel accuracy scale of 100, regardless of the timing. This query will search for the exact term "CT Reports" within the specified folder and will return results with a high level of accuracy. The query is not inverted and only one item occurrence is required. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diseases of the@21:26:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the digestive system (k00-k94)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(K00-K94) Dise~rl1r\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the digestive system (k00-k94)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to diseases of the digestive system, as classified in the ICD-10 and ICD-9 coding systems under the range of codes K0-K94, with a specificity scale of 0 and any timing, and display the results on panel 1 with an accuracy scale of 100 and a single occurrence. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Mental Disorder@21:27:43</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of diagnoses related to mental disorders (ICD-9 codes 290-319) in the i2b2 database, with a specificity scale of 0, panel timing set to ANY, and a total of 1 item occurrence. The query should have a high accuracy scale of 100 and should not be inverted. The panel number is 1, and the query name is "Mental Disorder@21:27:43". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diseases of the@21:28:42</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the respiratory system (j00-j99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to diseases of the respiratory system, specifically those coded within the range of J00-J9 in the ICD10 and ICD9 classification systems, with a high level of specificity (100%) and no inversion of the search results. The query will be applied to any time frame and the panel will be the first one in the analysis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Disease-Events @21:29:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the skin and subcutaneous tissue (l00-l99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(L00-L99) Dise~05o1\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the skin and subcutaneous tissue (l00-l99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Events of pregnancy</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Events of pregnancy (630-677)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Events of pregnancy</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with diagnoses related to diseases of the skin and subcutaneous tissue (ICD10-ICD9 codes L0-L9) and events of pregnancy (ICD10-ICD9 codes 630-67). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Takin@14:33:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Taking Insulin</item_name>
<item_key>masterid:3728</item_key>
<tooltip>Taking Insulin</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with Essential hypertension, Diabetes mellitus, and are currently taking insulin. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Female@20:17:50@21:30:29</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Female@20:17:50</item_name>
<item_key>masterid:2998</item_key>
<tooltip>Female@20:17:50</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all female patients who have been seen between 20:17:50 and 21:30:29 with no specific time constraint, and I want this query to have a high level of accuracy (1000%) and be part of a panel with one item. This item should be a synonym of the previous query, with the key "masterid:298". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@11:01:25</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with any specificity and accuracy scale, for any time period, with a single occurrence, and using the Diagnoses element as the search criteria. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnos-Diagnos@11:10:32</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with any diagnoses recorded in the i2b2 database, with a specificity scale of 0 and a panel accuracy scale of 100, looking at all occurrences of the diagnoses panel, with no synonyms and no inversion of the panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:20:41</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a high level of specificity and no time constraint. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:42:38</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any specificity, time range, and accuracy level, using the Diagnoses panel with the item key \i2b2_DIAG\i2b2\Diagnoses\ and a class of ENC, displaying the results in a single panel with no inversion of the results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essen-Diabe-Takin@14:35:15</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Taking Insulin</item_name>
<item_key>masterid:3728</item_key>
<tooltip>Taking Insulin</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of essential hypertension, diabetes mellitus, and who are currently taking insulin. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Gender-English@15:05:57</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>English</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Language\English\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Language \ English</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with the demographic information of gender and language where the gender is recorded as male or female and the language is recorded as English. The query should be applied to any time period, with 1000% accuracy and specificity set to 0. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Antiviral agent@21:31:03</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Antiviral agent@19:00:16</item_name>
<item_key>masterid:1351</item_key>
<tooltip>Antiviral agent@19:00:16</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find any instances of the use of antiviral agents in the patient's medical records, with a specificity scale of 0 and a high accuracy level, and the query should include only one item from the panel with the name "Antiviral agent@19:00:16" and the key "masterid:1351". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@01:09:58</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, regardless of specificity or time frame, with a high level of accuracy and a single occurrence per item, using the Diagnoses panel in the query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@01:29:00</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a specificity scale of 0, any timing, and an accuracy scale of 100, with the panel number and panel timing set to 1, and the item hlevel set to 1, and the item key set to "\\i2b2_DIAG\i2b2\Diagnoses\", with a tooltip of "Diagnoses" and the class set to ENC, without any synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@01:30:10</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with a specificity scale of 0 and a panel accuracy scale of 100, considering any timing, and with a single occurrence of the item "Diagnoses" in the panel, which is a synonym for the key "\i2b2_DIAG\i2b2\Diagnoses\". The query is named "Diagnoses@01:30:10". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory sys@17:05:01</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all diagnoses related to the circulatory system (ICD codes 390-459) in the i2b2 database, with a specificity scale of 0 and a panel accuracy scale of 100, with the results including any timing and displaying only one panel with a single item, which is the Circulatory System category, and the item is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnos-Diagnos@11:10:14</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all encounters where any diagnosis is present, with a high level of specificity and accuracy, and the timeframe is not restricted. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:27:01</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any specificity and time frame, and display them in a panel with a 100% accuracy scale, showing the most recent diagnosis first. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:28:01</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, regardless of time, with 1000% accuracy, using the specific item 'Diagnoses' from the 'Diagnoses' panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:34:05</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with any specificity, at any time, and with 1000% accuracy, including synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>MMSE sc-22@08:45:11</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>MMSE score</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mild Alzheimers disease</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>22</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\22\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 22</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of Mild Alzheimer's disease with an MMSE score of 2 in the OASIS Clinical Measures section of the BIRN database. The query will search for any occurrences of this condition within the specified timeframe and prioritize high accuracy in the results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>21@15:56:23</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>21</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\21\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 21</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have a Mild Alzheimer's disease diagnosis with a MMSE score of 21 in the OASIS Clinical Measures panel, with any timing, and a specificity scale of 0, accuracy scale of 100, and no inversion. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Wiccan@10:34:29</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Wiccan</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Religion\Wiccan\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Religion \ Wiccan</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with the religion 'Wiccan' in the demographics section of their medical record, with a specificity scale of 0 and an accuracy scale of 100, using any time frame for the query, and displaying the results on panel 1. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:03:54</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database with any specificity, time frame, and accuracy level, using the "Diagnoses" element (\\i2b2_DIAG\i2b2\Diagnoses\) as the primary search criteria, and display the results in a panel with a total of one item occurrence. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Acute r-20@08:41:58</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Acute rheumatic fever (i00-i02)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\(I00-I02) Acut~bzf4\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99) \ Acute rheumatic fever (i00-i02)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>20</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\20\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 20</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of Acute Rheumatic Fever (ICD10-ICD9 code I00-I02) and a MMSE score indicating Mild Alzheimer's disease (20 points) within any time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>MMSE sc-22@08:42:18</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>MMSE score</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mild Alzheimers disease</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>22</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\22\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 22</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients who have a MMSE score of 2 in the 'Mild Alzheimers disease' category, with a specificity scale of 0 and any timing, within the OASIS clinical measures panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>MMSE sc-22@08:43:14</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>MMSE score</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mild Alzheimers disease</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>22</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\22\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 22</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a Mild Alzheimer's disease diagnosis and an MMSE score of 2 in the OASIS Clinical Measures data section. The query should search for any time period and have a high level of accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@20:27:16</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Married</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\Married\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Marital Status \ Married</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Skin diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Skin diseases (680-709)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Skin diseases</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find male patients aged 65 years or older who are married and have been diagnosed with skin diseases. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Oasis-Rx Si-Antin@13:30:41</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Oasis</item_name>
<item_key>\\BIRN\BIRN\oasis\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Medications</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\</item_key>
<item_icon>FA</item_icon>
<tooltip>Medications</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Antineoplastics</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME55) antineoplastics\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ antineoplastics</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the term "Oasis" in the BIRN section of the ENC (Encounter) table, and then constrain the search to only include medications (from the i2b2_MEDS table) with the Rx Sig modifier, specifically those that belong to the antineoplastics category (LME5) in the MUL section of the i2b2_MEDS table. The search should be performed with 100% accuracy and include all timings (ANY). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@02:31:32</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses in the i2b2 database with a specificity scale of 0 and a panel accuracy scale of 100, with the query named "Diagnoses@02:31:32" and the timing set to "ANY". This query is part of a panel with panel number 1 and panel timing set to "ANY". The total number of items in this query is 1, and it includes a single item called "Diagnoses" with an icon of "FA" and a class of "ENC". This query has no synonyms associated with it. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>MMSE -Mild -22@08:40:49</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>MMSE score</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Mild Alzheimers disease</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>22</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\22\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 22</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a Mild Alzheimer's disease diagnosis and a Mini-Mental State Examination (MMSE) score of 2, within any time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@03:18:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database at any time with a high level of accuracy (1000%) and no specificity scaling, with a single item panel and no inversion applied, using the "Diagnoses" concept from the "i2b2_DIAG" namespace. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@03:29:34</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with no specific time frame or accuracy level specified, and with no inversion applied, using the "Diagnoses" item from the "ENC" class in the first panel of the query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diagnoses@04:31:34</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses recorded in the i2b2 database, with no specific time frame or accuracy requirements, and I want to include only the top-level diagnosis category. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Essential (prim@22:18:31</query_name>
<query_timing>SAMEVISIT</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Essential (primary) hypertension</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\(I10-I15) Hype~5igm\(I10) Essentia~sbwm\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99) \ Hypertensive diseases (i10-i15) \ Essential (primary) hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with Essential (primary) hypertension (ICD code I10) and Diabetes mellitus (ICD code E08-E13) during the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>MMSE sc-22@08:43:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>MMSE score</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mild Alzheimers disease</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>22</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\22\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 22</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with a Mild Alzheimer's disease diagnosis and a MMSE score of 2. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>MMSE sc-22@08:45:24</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>MMSE score</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mild Alzheimers disease</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>22</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\22\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ Mild Alzheimer's disease \ 22</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a MMSE score of 2 in the Mild Alzheimer's disease category within the Clinical Measures section of the BIRN Oasis database, with a specificity scale of 0 and a query timing set to ANY. The panel timing and accuracy scale are both set to ANY and 100 respectively, and the panel number is set to 1 and 2 for the two different panels specified. The query is not inverted, and there is a total of 1 item occurrence per panel. The hlevel for the first item is 3, with a key of "\\BIRN\BIRN\oasis\Clinical Measures\MMSE score", and the second item has an hlevel of 4 and a key of "\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease". The third item has an hlevel of 5 and a key of "\\BIRN\BIRN\oasis\Clinical Measures\MMSE score\Mild Alzheimers disease\2". All |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Socioec-Socioec@19:45:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Digestive system (520-579)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Digestive system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Medications</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\</item_key>
<item_icon>FA</item_icon>
<tooltip>Medications</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Events of pregnancy</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Events of pregnancy (630-677)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Events of pregnancy</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Medications</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\</item_key>
<item_icon>FA</item_icon>
<tooltip>Medications</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with information on their socioeconomic status from the "oasis \ Demographics" section and diagnoses related to the digestive system (520-579) or events of pregnancy (63-67), along with their medications listed in the "Medications" section, with a specificity scale of 0 and a query timing of ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Socio-Socio-Socio@19:48:48</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with socioeconomic status, race, and mental disorders (290-319) diagnoses, with any timing and 1000% accuracy, using the i2b2 query builder. The query will have three panels, each with one occurrence of the specified items. The first panel includes Socioeconomic Status from the oasis Demographics section, Race from the Demographics section, and Mental Disorders from the Diagnoses section. The second and third panels are similar, with the same items from the same sections. |
Subsets and Splits
No saved queries yet
Save your SQL queries to embed, download, and access them later. Queries will appear here once saved.