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```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Type ->= 85-Hyper@13:20:05</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Type 2 diabetes mellitus without complications</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\(E11) Type 2 d~5ycb\(E11.9) Type 2~2d9f\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13) \ Type 2 diabetes mellitus
\ Type 2 diabetes mellitus without complications</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>>= 85 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 85 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 85 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Hypertensive disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with Type 2 diabetes mellitus without complications, who are aged 85 years or older, and have a history of hypertensive disease. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Admit Diagnosis@23:21:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Infectious and parasitic diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Infectious and parasitic diseases (001-139)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Infectious and parasitic diseases</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Infectious and parasitic diseases (001-139)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of infectious and parasitic diseases (ICD-9 codes 01-139) that were listed as the admit diagnosis in the patient's medical record, with a specificity scale of 0 and a panel accuracy scale of 100, within any time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>40 year-Male@06:39:28</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>40 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\40 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old \ 40 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all male patients who are 40 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>GHBA1C (Group:G@10:34:07</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>GHBA1C (Group:GHBA1C)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\Hemoglobin\GHBA1C\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Hemoglobin \ GHBA1C (Group:GHBA1C)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>2</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of GHBA1C (Group:GHBA1C) lab tests with a hemoglobin level less than 2% in the i2b2 database, within any time frame, with 1000% accuracy, and display the result in a panel named "Labtests \ Chemistry \ Hemoglobin \ GHBA1C (Group:GHBA1C)" on the query builder interface. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Female-Male@22:46:15</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find a query that will return results for both female and male patients, with any timing, and with a specificity scale of 0 and an accuracy scale of 100 for each panel. The query will include two panels, one for female patients with the key "\\i2b2_DEMO\i2b2\Demographics\Gender\Female\" and one for male patients with the key "\\i2b2_DEMO\i2b2\Demographics\Gender\Male\". The query is named "Female-Male@2:46:15" and the panel number for each panel is 1 and 2 respectively. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Tuber-Menta-Disea@15:53:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Tuberculosis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Infectious and parasitic diseases (001-139)\Tuberculosis (010-018)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Infectious and parasitic diseases \ Tuberculosis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Mental retardation</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\Mental retardation (317-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders \ Mental retardation</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diseases of nail</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Skin diseases (680-709)\Other diseases (700-709)\(703) Diseases of nail\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Skin diseases \ Other diseases \ Diseases of nail</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of tuberculosis, who have a socioeconomic status recorded in their medical record, and also have a diagnosis of mental retardation or a disease of the nail. The query is designed to look for these specific conditions within the Infectious and Parasitic Diseases, Mental Disorders, and Skin Diseases categories, and the search will return results for any time frame (ANY timing). The accuracy scale is set to 100, indicating a high level of specificity. The results will include all three panels: Tuberculosis, Socioeconomic Status, and Diseases of the Nail. The query will not be inverted, meaning that the results will only include patients with all three conditions present. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Tuber-Menta-Disea@15:53:52</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Tuberculosis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Infectious and parasitic diseases (001-139)\Tuberculosis (010-018)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Infectious and parasitic diseases \ Tuberculosis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Socioeconomic Status</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Socioeconomic Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics \ Socioeconomic Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Mental retardation</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\Mental retardation (317-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders \ Mental retardation</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Conditions in the perinatal period</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Conditions in the perinatal period (760-779)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Conditions in the perinatal period</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diseases of nail</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Skin diseases (680-709)\Other diseases (700-709)\(703) Diseases of nail\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Skin diseases \ Other diseases \ Diseases of nail</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Genitourinary system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Genitourinary system (580-629)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Genitourinary system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with diagnoses of tuberculosis, mental retardation, and diseases of the nail, as well as information on their socioeconomic status and conditions in the perinatal period, along with any diagnoses related to the genitourinary system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circu-Bacte-Anti-@15:55:44</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Bacterial and viral infectious agents (b95-b97)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(A00-B99) Cert~ugmm\(B95-B97) Bact~28iq\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Certain infectious and parasitic diseases (a00-b99) \ Bacterial and viral infectious agents (b95-b97)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Anti-infectives</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME10) anti-infectives\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ anti-infectives</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who have been diagnosed with circulatory system disorders and have been treated with anti-infectives, while also having a history of bacterial or viral infections. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>High -Male-Princ@08:32:24</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>High school grad.</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\High school grad.\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ High school grad.</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Less than high school grad.</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\Less than high school grad.\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ Less than high school grad.</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Nutritional deficiences</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Nutritional deficiences (260-269)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Nutritional deficiences</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Nutritional deficiences (260-269)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all male patients who have a principal diagnosis of nutritional deficiencies (ICD-9 codes 260-269) or mental disorders (ICD-9 codes 290-319) and have a high school education level or less. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asian-Skin di@13:11:51</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Asian</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Asian\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Asian</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Hispanic</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Hispanic\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Hispanic</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Black</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Black\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Black</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>White</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\White\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ White</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Skin diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Skin diseases (680-709)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Skin diseases</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who are of Asian race and have been diagnosed with skin diseases, excluding those who are Hispanic or Black, and including White patients, with a high level of specificity and accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>mild dementia@05:15:09</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>mild dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\mild dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ mild dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances where a patient has been diagnosed with mild dementia as indicated by the Clinical Dementia Rating (CDR) scale, with a specificity scale of 0 and a panel accuracy scale of 100, and the query timing set to ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circulatory sys@12:02:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) using the i2b2 query builder, with a specificity scale of 0 and accuracy scale of 100, and with a panel timing of "ANY" and a query timing of "ANY". This query is named "Circulatory sys@12:02:31" and is part of a panel with a panel number of 1 and a total item occurrence of 1. The item is at level 2 and has a class of ENC, with an icon of FA. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabe-Essen-TOTAL@12:54:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>TOTAL LDH (LOINC:2532-0)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB20) Cardiac Tests\LDH\LOINC:2532-0\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Cardiac Tests \ LDH (Group:LDH) \ TOTAL LDH (LOINC:2532-0)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>200</value_constraint>
<value_unit_of_measure>u/l</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of Diabetes Mellitus and Essential Hypertension, who have had a Total LDH (LOINC:2532-0) test result greater than 20 u/l at any time. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabe-Essen-TOTAL@13:00:02</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>TOTAL LDH (LOINC:2532-0)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB20) Cardiac Tests\LDH\LOINC:2532-0\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Cardiac Tests \ LDH (Group:LDH) \ TOTAL LDH (LOINC:2532-0)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>200</value_constraint>
<value_unit_of_measure>u/l</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of diabetes mellitus and essential hypertension, and who have had a total LDH (LOINC:2532-0) result greater than 20 u/l at any time during their medical history. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma@12:23:36</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Asthma</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J45) Asthma\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Asthma</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have been diagnosed with asthma, a chronic lower respiratory disease, at any point in time, using the ICD-9 or ICD-10 coding system with a specificity scale of 0 and accuracy scale of 100%. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>mild de-moderat@05:14:54</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>mild dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\mild dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ mild dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>moderate dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\moderate dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ moderate dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of mild or moderate dementia, using the Clinical Dementia Rating (CDR) scale, with any timing, and an accuracy scale of 1000%, and the results should include both mild and moderate dementia diagnoses from the OASIS (Online Assessment of Symptoms and Illness Severity) system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Admit D-Princip@14:31:34</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Certain conditions originating in the perinatal period (p00-p96)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(P00-P96) Cert~6976\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Certain conditions originating in the perinatal period (p00-p96)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Admit Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(P00-P96) Cert~6976\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Certain conditions originating in the perinatal period (p00-p96)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(P00-P96) Cert~6976\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Certain conditions originating in the perinatal period (p00-p96)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Principal Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(P00-P96) Cert~6976\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Certain conditions originating in the perinatal period (p00-p96)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(P00-P96) Cert~6976\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Certain conditions originating in the perinatal period (p00-p96)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Principal Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(P00-P96) Cert~6976\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who have certain conditions originating in the perinatal period (p0-p96) as either an admission diagnosis or a principal diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>VITAM-Busul-Alkyl@15:32:55</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>VITAMIN B12 UNSAT BIND CAPA (LOINC:2171-7)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB31) Anemia Related Studies\B12USAT\LOINC:2171-7\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Anemia Related Studies \ B12 Unsaturated Binding (Group:B12USAT) \ Vitamin b12 unsat bind capa (LOINC:2171-7)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Busulfan</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME55) antineoplastics\(LME56) alkylating agents\busulfan\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ antineoplastics \ alkylating agents \ busulfan</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Alkylating agents</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME55) antineoplastics\(LME56) alkylating agents\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ antineoplastics \ alkylating agents</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Alkylating agents</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME55) antineoplastics\(LME56) alkylating agents\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ antineoplastics \ alkylating agents</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who have had a Vitamin B12 Unsaturated Binding (LOINC:2171-7) lab test result and were prescribed Busulfan medication, as well as those who were prescribed other alkylating agents as part of their treatment. The query should have a specificity scale of 0 and a panel timing of "ANY," indicating that the order of the events does not matter. The accuracy scale for each panel is set to 100, meaning that all items in each panel must be present for the patient to match the query. Panel 1 focuses on the Vitamin B12 Unsaturated Binding test, while Panel 2 and 3 focus on the medications, with Panel 2 specifically looking for Busulfan and Panel 3 looking for any alkylating agents. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma@12:23:58</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Asthma</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J40-J47) Chro~fbox\(J45) Asthma\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Chronic lower respiratory diseases (j40-j47) \ Asthma</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of Asthma diagnoses within the Chronic Lower Respiratory Diseases category in the ICD-10 and ICD-9 coding systems, with a specificity scale of 0 and a total item occurrence of 1, using any timing and with a panel accuracy scale of 100. The query is named "Asthma@12:23:58" and is considered synonymous with the term "Diagnoses of the Respiratory System (j0-j9) Chronic Lower Respiratory Diseases (j40-j47) Asthma". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certa-Male-HEMAT@11:14:54</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Certain conditions originating in the perinatal period (p00-p96)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(P00-P96) Cert~6976\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Certain conditions originating in the perinatal period (p00-p96)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>HEMATOCRIT (LOINC:4544-3)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB53) Hematology\(LLB57) Complete Blood Count\HCT\LOINC:4544-3\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Hematology \ Complete Blood Count \ HCT (Group:HCT) \ Hct (LOINC:4544-3)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>100</value_constraint>
<value_unit_of_measure>%</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find male patients who have been diagnosed with certain conditions originating in the perinatal period (p0-p96) and have a hematocrit (HCT) value less than 10%. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circulatory sys@11:47:56</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to the circulatory system (ICD codes 390-459) in the i2b2 database, with a specificity scale of 0, accuracy scale of 100, and no inversion applied, with the query named "Circulatory sys@1:47:56" and timing set to "ANY". |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circula-Gender@11:48:51</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find diagnoses related to the circulatory system (ICD codes 390-459) and gender information for patients in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabe-Essen-TOTAL@13:31:11</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>TOTAL LDH (LOINC:2532-0)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB20) Cardiac Tests\LDH\LOINC:2532-0\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Cardiac Tests \ LDH (Group:LDH) \ TOTAL LDH (LOINC:2532-0)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>200</value_constraint>
<value_unit_of_measure>u/l</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of Diabetes mellitus, Essential hypertension, and TOTAL LDH (LOINC:2532-0) level greater than 20 u/l within any timeframe. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>75 year-Admit D@17:47:02</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>75 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\75-84 years old\75 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 75-84 years old \ 75 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who are 75 years old with a circulatory system diagnosis as their admit diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Conditions in t@11:51:03</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Conditions in the perinatal period</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Conditions in the perinatal period (760-779)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Conditions in the perinatal period</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to conditions in the perinatal period (ICD-9 codes 760-79) with a specificity scale of 0 and an accuracy scale of 100, and display them in a panel with a total of 1 item occurrence, for any timing, and with a query name of "Conditions in the perinatal period" using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Congenital anom@11:51:40</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Congenital anomalies</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Congenital anomalies (740-759)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Congenital anomalies</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of Congenital anomalies (ICD-9 codes 740-759) within the i2b2 data repository, with a specificity scale of 0, panel timing set to ANY, and panel accuracy scale set to 100, with a single item occurrence, and the item class set to ENC. This query will return all diagnoses related to congenital anomalies, with the highest level of accuracy and no synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diabete-Huchard@17:07:44</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>Huchard's disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\(401-9) Unspecified essential hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension \ Unspecified essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of diabetes mellitus (hlevel 4) and unspecified essential hypertension (hlevel 5) within the specified time frame (ANY), with a specificity scale of 0 and a panel accuracy scale of 100, where the items are not inverted. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Influen-White@10:42:03</query_name>
<query_timing>SAMEVISIT</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>White</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\White\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ White</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of Influenza and pneumonia (ICD10 codes J09-J18) during the same visit as their encounter, and who are also identified as White in their demographics. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diabetes mellit@07:31:35</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with a diagnosis of Diabetes mellitus (e08-e13) in the Endocrine, nutritional and metabolic diseases (e0-e89) category, with any timing, 100% accuracy, and 1 specificity scale, using the ICD10_ICD9 diagnoses code (e08-e13) Diabetes mellitus (e08-e13). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diabetes mellit@07:35:41</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with a diagnosis of Diabetes mellitus (e08-e13) in the Endocrine, nutritional and metabolic diseases (e0-e89) category, with a specificity scale of 0, accuracy scale of 100, and panel timing set to ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> 0-9 years old@17:46:02</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 0-9 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\0-9 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 0-9 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>75 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\75-84 years old\75 years old\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Age \ 75-84 years old \ 75 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients aged 0-9 years old and 75 years old in the i2b2 Demographics category. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>mild dementia@12:58:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>mild dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\mild dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ mild dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>moderate dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\moderate dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ moderate dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Intracerebral hemorrhage</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Cerebrovascular disease (430-438)\(431) Intracerebral hemorrhage\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Cerebrovascular disease \ Intracerebral hemorrhage</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of mild or moderate dementia, as well as those with a history of intracerebral hemorrhage, with a specificity scale of 0 and a panel accuracy scale of 100, covering any time period (ANY). The query should include the following panels: the first panel, which includes items related to mild dementia, moderate dementia, and intracerebral hemorrhage. The first two items are from the "oasis" clinical measures category, while the third item is from the "Diagnoses" category. The query will not include synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Principal Diagn@14:37:50</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Acute Rheumatic fever</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Acute Rheumatic fever (390-392)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Acute Rheumatic fever</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a principal diagnosis of Acute Rheumatic Fever within the Circulatory System category (ICD-9 code range 390-459) in the i2b2 database, with a specificity scale of 0 and accuracy scale of 100, and the query timing set to ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Principal Diagn@00:13:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Normal delivery</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Events of pregnancy (630-677)\(650) Normal delivery\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Events of pregnancy \ Normal delivery</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Events of pregnancy (630-677)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have a principal diagnosis of "Normal delivery" in the Events of pregnancy category (codes 630-67) within the Diagnoses domain, with a specificity scale of 0 and a panel accuracy scale of 100, for any time period, and the query will not be inverted. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diabetes mellit@07:34:16</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of Diabetes mellitus (e08-e13) in the Endocrine, nutritional and metabolic diseases category (e00-e89) with a specificity scale of 0, panel timing set to ANY, and a total of 1 item occurrence. This query will search for the mentioned ICD10 and ICD9 codes and return results with 100% accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diabetes mellit@07:34:56</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with a diagnosis of Diabetes mellitus (e08-e13) in the Endocrine, nutritional and metabolic diseases category (e00-e89) using the ICD10 and ICD9 coding systems, with a specificity scale of 0 and a total of 1 item occurrence. The query will be applied to any time period and will have an accuracy scale of 100. The query will be displayed on the first panel, with no inversion of the results, and the icon used will be FA. This query will be labeled as Diabetes mellit@07:34:56. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Gende-Other-Medic@20:59:58</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Other viral and chlamydial diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Infectious and parasitic diseases (001-139)\Other viral and chlamydial diseases (070-079)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Infectious and parasitic diseases \ Other viral and chlamydial diseases</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Medications</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\</item_key>
<item_icon>FA</item_icon>
<tooltip>Medications</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find the demographic information of gender and diagnoses related to other viral and chlamydial diseases along with medications taken by the patients in the study. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Operati-Inpatie@21:14:49</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Operations on integument</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\PRC\ICD9 (Inpatient)\(85-86) Operations on integument\</item_key>
<item_icon>FA</item_icon>
<tooltip>Procedures \ ICD9 (Inpatient) \ Operations on integument</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Inpatient visit</item_name>
<item_key>\\i2b2_VISIT\i2b2\Visit Details\Visit type\Inpatient visit\</item_key>
<item_icon>LA</item_icon>
<tooltip>Visit Details \ Visit type \ Inpatient visit</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all inpatient visits that have a procedure related to operations on the integument (skin) as coded in the ICD9 (Inpatient) classification system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Principal Diagn@14:38:52</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Hypertensive disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Hypertensive disease</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Secondary Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Secondary Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Circulatory system (390-459)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a diagnosis of hypertensive disease (ICD-9 codes 401-405) in the Circulatory system (390-459) section, either as a principal diagnosis or a secondary diagnosis, with no specific time constraint and a high level of accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> 18-34-Group B@10:20:57</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name> 18-34 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\18-34 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 18-34 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 35-44 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\35-44 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 35-44 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 45-54 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\45-54 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 45-54 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name> 55-64 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\55-64 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ 55-64 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Group B hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-1) Pure hyperglyceridemia\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Pure hyperglyceridemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, Group B</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-1) Pure hyperglyceridemia\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Pure hyperglyceridemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mixed hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-2) Mixed hyperlipidemia\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Mixed hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Group A hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-0) Pure hypercholesterolemia\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Pure hypercholesterolemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, Group A</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-0) Pure hypercholesterolemia\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Pure hypercholesterolemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Combined hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Familial combined hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Familial multiple lipoprotein-type hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, combined</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia NOS</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, other and unspecified</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Multiple-type hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Other and unspecified hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-4) Other and unspecified hyp~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Other and unspecified hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Group D hyperlipidemia</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Metabolic and immunity disorders (270-279)\(272) Disorders of lipoid metabol~\(272-3) Hyperchylomicronemia\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ Metabolic and immunity disorders \ Disorders of lipoid metabolism \ Hyperchylomicronemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Combined hyperlipidemia nos</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.2) Mixed~z0ea\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Combined hyperlipidemia nos</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Familial combined hyperlipidemia</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.4) Other~p8ow\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Familial combined hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group a</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.0) Pure h~vvif\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group a</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group b</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.1) Pure h~lfbf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group b</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group c</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.2) Mixed~z0ea\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group c</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group d</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.3) Hyperc~ggag\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group d</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, unspecified</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.5) Hyperl~kij0\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, unspecified</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mixed hyperlipidemia</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.2) Mixed~z0ea\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Mixed hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group d</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.3) Hyperc~ggag\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group d</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group b</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.1) Pure h~lfbf\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group b</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Combined hyperlipidemia nos</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.2) Mixed~z0ea\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Combined hyperlipidemia nos</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group c</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.2) Mixed~z0ea\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group c</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Mixed hyperlipidemia</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.2) Mixed~z0ea\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Mixed hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, group a</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.0) Pure h~vvif\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, group a</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Familial combined hyperlipidemia</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.4) Other~p8ow\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Familial combined hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Hyperlipidemia, unspecified</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.5) Hyperl~kij0\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Hyperlipidemia, unspecified</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Other hyperlipidemia</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E70-E88) Meta~6ibb\(E78) Disorder~ylaw\(E78.4) Other~p8ow\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Metabolic disorders (e70-e88) \ Disorders of lipoprotein metabolism and other lipidemias
\ Other hyperlipidemia</tooltip>
<class>ENC</class>
<item_is_synonym>true</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a diagnosis of hyperlipidemia, including combined hyperlipidemia, hyperlipidemia group C, mixed hyperlipidemia, hyperlipidemia group A, familial combined hyperlipidemia, and other types of hyperlipidemia, within the categories of endocrine, nutritional, and metabolic diseases, specifically within the subcategory of metabolic disorders related to lipoprotein metabolism and other lipidemias. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diabetes mellit@07:42:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with a diagnosis of Diabetes mellitus (e08-e13) in the Endocrine, nutritional and metabolic diseases (e0-e89) category, with a specificity scale of 0, accuracy scale of 100, and any timing for the query. This query will search for patients with a diagnosis of diabetes using the ICD10 and ICD9 coding system, and the results will include all cases regardless of time. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Oasis@14:50:27</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Oasis</item_name>
<item_key>\\BIRN\BIRN\oasis\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of the term "Oasis" in the BIRN section of the i2b2 database, with a specificity scale of 0, accuracy scale of 100, and a single panel, regardless of the timing. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Oasis-Clinica@14:51:00</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Oasis</item_name>
<item_key>\\BIRN\BIRN\oasis\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Clinical Dementia Rating (CDR)</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find any instances of the term "Oasis" in the BIRN section of the chart notes, as well as any mentions of "Clinical Dementia Rating (CDR)" within the Clinical Measures section of the Oasis chart notes. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Demog-Admit-Patie@21:11:23</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Demographics</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\</item_key>
<item_icon>FA</item_icon>
<tooltip>oasis \ Demographics</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Injury and poisoning</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Injury and poisoning (800-999)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Injury and poisoning</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Injury and poisoning (800-999)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Medications</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\</item_key>
<item_icon>FA</item_icon>
<tooltip>Medications</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with a demographic record and an injury or poisoning diagnosis as an admission diagnosis who have also received medication instructions. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diabetes mellit@17:28:17</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>>= 65 years old</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Age\>= 65 years old\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Age \ >= 65 years old</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of diabetes mellitus (ICD10 code E08-E13) who are 65 years old or older, with no specific time frame and high accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Social -Pregnan@18:24:13</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Social history</item_name>
<item_key>\\i2b2_REP\i2b2\Reports\Medical History\Social History\</item_key>
<item_icon>LA</item_icon>
<tooltip>i2b2 \ Reports \ Medical History \ Social History</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Events of pregnancy</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Events of pregnancy (630-677)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Events of pregnancy</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Pregnancy, childbirth and the puerperium (o00-o99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(O00-O99) Preg~e5ik\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Pregnancy, childbirth and the puerperium (o00-o99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have social history reports containing events of pregnancy and have been diagnosed with conditions related to pregnancy, childbirth, and the puerperium (ICD-10 codes O0-O9) in their medical records, with a high level of specificity and no time constraints. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Skin -Gende-Proce@21:04:10</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Skin diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Skin diseases (680-709)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Skin diseases</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Procedures</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\</item_key>
<item_icon>FA</item_icon>
<tooltip>Procedures</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with skin diseases, regardless of their gender, who have had any procedure performed on them. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>ICD9 -Gende-Incom@21:06:08</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>ICD9 (Inpatient)</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\PRC\ICD9 (Inpatient)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Procedures \ ICD9 (Inpatient)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find the inpatient ICD9 codes along with gender and income information for patients in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Male-High -Admit@21:07:03</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>High income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\High income\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographics \ Income \ High income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Injury and poisoning</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Injury and poisoning (800-999)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Injury and poisoning</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Admit Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Injury and poisoning (800-999)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find male patients with a high income who have been admitted and have an injury or poisoning diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Gender-Admit D@21:08:12</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the nervous system (g00-g99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(G00-G99) Dise~j8kq\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the nervous system (g00-g99)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Admit Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Admit Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(G00-G99) Dise~j8kq\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with any diagnoses related to diseases of the nervous system (ICD codes G0-G9) as their admit diagnosis, categorized by gender. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Neurolo-Gender@14:24:09</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Neurologic Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Neurologic Disorders (320-389)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Neurologic Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with neurological disorders and their corresponding gender information. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Incom-Neopl-Gende@21:19:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Neoplasms</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Neoplasms (140-239)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Neoplasms</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find a query that searches for demographic information on income, neoplasms, and gender with any timing, 1000% accuracy, and no inversion. The query includes three panels: the first panel focuses on income, the second on neoplasms, and the third on gender, all with a high specificity scale of 100. The first panel contains one item related to income, the second panel contains one item related to neoplasms, and the third panel contains one item related to gender. The query is named "Incom-Neopl-Gende@21:19:21" and has a specificity scale of 0. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Endocrine disor@12:06:14</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Endocrine disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find diagnoses related to Endocrine disorders in the ICD-9-CM codes range 240-259, with a specificity scale of 0, panel timing set to ANY, and panel accuracy scale set to 100. The query is named "Endocrine disor@12:06:14" and has a single panel with a total of one item occurrence. The panel is not inverted, and the class is set to ENC. The tooltip for the item is "Diagnoses \ Endocrine disorders." |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabetes mellit@16:49:51</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of "Diabetes mellitus" as a diagnosis in the Endocrine disorders section, specifically under Other endocrine gland diseases, using the ICD-9-CM coding system, with a specificity scale of 0 and accuracy scale of 100, and with no inversion of the panel. The query timing is set to ANY, meaning it will search for all occurrences regardless of when they were recorded. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>very mi-nondeme@11:25:39</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>very mild dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\very mild dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ very mild dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>moderate dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\moderate dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ moderate dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>moderate dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\moderate dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ moderate dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>nondemented</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\nondemented\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ nondemented</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients with a diagnosis of very mild dementia or moderate dementia, as well as those who are nondemented, within any timeframe, using the Clinical Dementia Rating (CDR) and the Mini-Mental State Examination (MMSE) score in the OASIS clinical measures. The specificity scale is set to 0, and the panel accuracy scale is set to 100. The panel timing is set to ANY, and the invert option is set to 0. This query consists of two panels, each with a total of one item occurrence. In the first panel, there are two items related to dementia, and in the second panel, there is one item related to nondemented patients. The class for all items is ENC, and none of the items are marked as synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Intraoperative @16:35:45</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>6</hlevel>
<item_name>Intraoperative cholangiogram</item_name>
<item_key>\\i2b2_PROC\i2b2\Procedures\PRC\ICD9 (Inpatient)\(87-99) Diagnostic and nonsurgical procedures\(p87) Diagnostic Radiology\(p87-5) Biliary tract x-ray\(p87-53) Intraoperative cholangio~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Procedures \ ICD9 (Inpatient) \ Diagnostic and nonsurgical procedures \ Diagnostic Radiology \ Biliary tract x-ray \ Intraoperative cholangiogram</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances where an intraoperative cholangiogram procedure was performed during any time in the patient's medical history, with a specificity scale of 0 and an accuracy scale of 100, using the ICD9 (Inpatient) code for Diagnostic Radiology and Biliary Tract X-ray procedures. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Psychotherapeut@14:19:13</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Psychotherapeutic agents</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME203) psychotherapeutic agents\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ psychotherapeutic agents</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Delgado, Luisa, MD</item_name>
<item_key>\\i2b2_PROV\i2b2\Providers\Medicine\Primary Care\Delgado, Luisa, MD\</item_key>
<item_icon>LA</item_icon>
<tooltip>i2b2 \ Providers \ Medicine \ Primary Care \ Delgado, Luisa, MD</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of the use of psychotherapeutic agents in the medical records, within any time frame, with a high level of accuracy, and filter the results by patients treated by Dr. Luisa Delgado, a primary care physician. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>nondeme-very mi@17:43:37</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>nondemented</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\nondemented\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ MMSE score \ nondemented</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>very mild dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\very mild dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ very mild dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients who have been assessed as non-demented and also have a very mild dementia diagnosis in their clinical records. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabetes mellit@16:52:35</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of "Diabetes mellitus" in the Endocrine disorders category, specifically within the Other endocrine gland diseases subcategory, with a specificity scale of 0 and a high accuracy level of 100. This query will search for any occurrences of this condition at any time and will not be inverted. The query is named "Diabetes mellitus" and is part of panel number 1, which has an accuracy scale of 100. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabe-Essen-TOTAL@07:12:08</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>TOTAL LDH (LOINC:2532-0)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB20) Cardiac Tests\LDH\LOINC:2532-0\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Cardiac Tests \ LDH (Group:LDH) \ TOTAL LDH (LOINC:2532-0)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>200</value_constraint>
<value_unit_of_measure>u/l</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of diabetes mellitus, essential hypertension, and elevated levels of total LDH (greater than 20 units/liter) in their lab results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Influen-Asian@10:47:12</query_name>
<query_timing>SAMEVISIT</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Asian</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Asian\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Asian</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with Influenza and pneumonia (ICD10 codes J00-J18) during the same visit, and who are also of Asian race (demographic information) in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>very mild demen@17:43:44</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>very mild dementia</item_name>
<item_key>\\BIRN\BIRN\oasis\Clinical Measures\Clinical Dementia Rating (CDR)\very mild dementia\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Clinical Measures \ Clinical Dementia Rating (CDR) \ very mild dementia</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of very mild dementia at any time, using the Clinical Dementia Rating (CDR) scale in the Oasis Clinical Measures section of the BIRN (Boston Informatics Research Network) database, with a specificity scale of 0 and a panel accuracy of 100%, and the panel inverted to 0. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Principal Diagn@13:33:00</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the eye and adnexa (h00-h59)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(H00-H59) Dise~6ji8\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the eye and adnexa (h00-h59)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Principal Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(H00-H59) Dise~6ji8\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of principal diagnoses related to diseases of the eye and adnexa (ICD-9 codes H0-H59) within the specified time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabe-Essen-TOTAL@07:19:19</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Diabetes mellitus</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Endocrine disorders (240-259)\Other endocrine gland diseases (250-259)\(250) Diabetes mellitus\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine disorders \ Other endocrine gland diseases \ Diabetes mellitus</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Essential hypertension</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>TOTAL LDH (LOINC:2532-0)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB20) Cardiac Tests\LDH\LOINC:2532-0\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Cardiac Tests \ LDH (Group:LDH) \ TOTAL LDH (LOINC:2532-0)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>GT</value_operator>
<value_constraint>200</value_constraint>
<value_unit_of_measure>u/l</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of diabetes mellitus, essential hypertension, and a total LDH value greater than 20 u/l. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@02:25:16</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all male patients with any age and any visit date in the i2b2 database using the Demographics panel with a high level of specificity (1000%) and accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Influen-Asian@10:47:28</query_name>
<query_timing>SAMEVISIT</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Asian</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Asian\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Asian</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with Influenza and pneumonia (ICD10 codes J00-J9) during the same visit and who are of Asian race in the demographics section of their medical record. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Cancer of colon@03:39:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>6</hlevel>
<item_name>Cancer of colon</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Neoplasms (140-239)\Malignant neoplasms (140-208)\Digestive organs and peritoneum (150-159)\(153) Malignant neoplasm of colon\(153-9) Malignant neoplasm of col~\</item_key>
<item_icon>LA</item_icon>
<tooltip>Diagnoses \ ... \ Malignant neoplasms \ Digestive organs and peritoneum \ Malignant neoplasm of colon \ Malignant neoplasm of colon, unspecified</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all instances of malignant neoplasm of the colon, unspecified, with a specificity scale of 0 and an accuracy scale of 100, using the i2b2 query builder with the diagnosis concept of "Cancer of colon" in the first panel, and without any synonyms. The query timing and panel timing are set to ANY, meaning that it will search for occurrences of this condition at any time during the patient's medical history. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Person_#1000000045@10:10:27</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Primary hypertension NOS</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Insulin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME148) hormones\(LME150) antidiabetic agents\(LME152) insulin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ hormones \ antidiabetic agents \ insulin</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of primary hypertension (NOS), diabetes mellitus (ICD10-ICD9 code e08-e13), and who have been prescribed insulin medication (LME150-LME152) at any time in their medical history. The specificity scale is set to 0, and the accuracy scale for each panel is set to 100, meaning that the search will be inclusive of all possible matches. The panel numbers represent different categories of data to be searched: the first panel is for the diagnosis of primary hypertension, the second panel is for the diagnosis of diabetes mellitus, and the third panel is for insulin medication. The hlevel values indicate the hierarchy level of the items within each panel, and the tooltips provide more detailed descriptions of the categories being searched. The class attribute is set to "ENC," which stands for "Encounter," indicating that the query is searching for encounters where these conditions or medications were documented. The item_is_synonym attribute is set to "false," |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@02:25:08</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all male patients in the i2b2 database, regardless of the time or specificity, with a high accuracy level of 100, and the query will be focused on the demographics category, specifically the gender attribute. The query will be named "Male@02:25:08" and will be part of the first panel in the analysis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Influen-Indian@10:47:53</query_name>
<query_timing>SAMEVISIT</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Indian</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Indian\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Indian</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with diagnoses of influenza and pneumonia (ICD-9 codes J09-J18) who also have the race attribute of Indian, within the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@02:28:04</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all male patients with any timing, regardless of specificity, in the Demographics panel, with an accuracy scale of 100, and without inverting the results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Female-Appendi@09:20:59</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Appendicitis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Digestive system (520-579)\Appendicitis (540-543)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Digestive system \ Appendicitis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find female patients with a diagnosis of appendicitis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Female@08:08:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Female</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Female\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Female</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all female patients in the database with no specific time constraint and a high level of accuracy, focusing on the demographic information regarding gender. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Gende-Circu-Chemi@08:18:11</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Chemistry</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all patients with demographic information on gender, any diagnoses related to the circulatory system, and any lab tests related to chemistry. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diagnoses@19:56:00</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diagnoses</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Hyperlipidemia@19:53:46</item_name>
<item_key>masterid:4343</item_key>
<tooltip>Hyperlipidemia@19:53:46</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Acute pancreati@19:52:55</item_name>
<item_key>masterid:4340</item_key>
<tooltip>Acute pancreati@19:52:55</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery) 18-34 years o@19:53:30</item_name>
<item_key>masterid:4342</item_key>
<tooltip> 18-34 years o@19:53:30</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of hyperlipidemia, acute pancreatitis, or within the age range of 18-34 years old, with no specificity or timing constraints, and with a total of 1 occurrence for each item in the panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Incom-Princ-Anemi@08:22:03</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Congenital anomalies</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Congenital anomalies (740-759)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Congenital anomalies</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Congenital anomalies (740-759)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Anemia Related Studies</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB31) Anemia Related Studies\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Anemia Related Studies</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a principal diagnosis of congenital anomalies (ICD-9 codes 740-759) who have had anemia-related lab tests performed and have an income recorded in the demographics section of their medical record. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Language@13:39:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Language</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Language\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Language</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with any recorded language information in the Demographics section of their electronic health record, using the i2b2 query builder with the specificity scale set to 0 and the accuracy scale set to 100. This query is saved with the name "Language@13:39:22" and is not a synonym for another query. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Languag-Gender@13:39:58</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Language@13:39:22</item_name>
<item_key>masterid:3910</item_key>
<tooltip>Language@13:39:22</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with any language and gender information recorded in their medical records. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Languag-LDL (Gr@13:42:07</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>0</hlevel>
<item_name>(PrevQuery)Language@13:39:22</item_name>
<item_key>masterid:3910</item_key>
<tooltip>Language@13:39:22</tooltip>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>LDL (Group:LDL)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB17) Lipid Tests\LDL\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Chemistry \ Lipid Tests \ LDL (Group:LDL)</tooltip>
<class>ENC</class>
<constrain_by_value>
<value_operator>LT</value_operator>
<value_constraint>1000</value_constraint>
<value_unit_of_measure>mg/dl</value_unit_of_measure>
<value_type>NUMBER</value_type>
</constrain_by_value>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all patients who have had a language-related encounter at 13:39:22 and also have a low-density lipoprotein (LDL) lab result from the chemistry lipid tests panel that is less than 1000 mg/dl. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Influen-Indian@10:48:28</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Indian</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Indian\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Indian</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients who have been diagnosed with Influenza and pneumonia (ICD-10 codes J00-J9, specifically J09-J18) and are of Indian race according to their demographics. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Race-Princ-Rx Si@08:24:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Race</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Race</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Skin diseases</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Skin diseases (680-709)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Skin diseases</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Skin diseases (680-709)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Medications</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\</item_key>
<item_icon>FA</item_icon>
<tooltip>Medications</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Rx Sig</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\RxSig\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the digestive system (k00-k94)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(K00-K94) Dise~rl1r\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the digestive system (k00-k94)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a principal diagnosis of skin diseases (680-709) and who have taken medications, while also considering their race demographics. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Marit-Menta-Facto@08:26:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Marital Status</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Marital Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Religion</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Religion\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Religion</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Mental Disorders</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>SAMEVISIT</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Factors influencing health status and contact with health services (z00-z99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(Z00-Z99) Fact~rmj9\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Factors influencing health status and contact with health services (z00-z99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a combination of demographic information such as marital status and religion, mental disorders, and factors influencing health status and contact with health services (z0-z9) within the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Gende-Princ-Princ@08:29:36</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Marital Status</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Marital Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Mental and behavioral disorders (f01-f99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(F01-F99) Ment~44ly\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental and behavioral disorders (f01-f99)</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\ICD10_ICD9\Principal Diagnosis\</modifier_key>
<applied_path>\Diagnoses\(F01-F99) Ment~44ly\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Complications of labor and delivery</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Events of pregnancy (630-677)\Complications of labor and delivery (660-669)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Events of pregnancy \ Complications of labor and delivery</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Events of pregnancy (630-677)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a principal diagnosis of mental and behavioral disorders (ICD-9 codes F01-F9) and a principal diagnosis of complications of labor and delivery (ICD-9 codes 60-69) within the context of demographics, specifically their gender and marital status. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>High -Male-Princ@08:31:44</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>High school grad.</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\High school grad.\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ High school grad.</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Less than high school grad.</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\Less than high school grad.\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ Less than high school grad.</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Nutritional deficiences</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Nutritional deficiences (260-269)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Nutritional deficiences</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Nutritional deficiences (260-269)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all male patients who have been diagnosed with nutritional deficiencies (ICD-9 codes 260-269) as their principal diagnosis and have either a high school graduation level of education or less than high school education. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Mild@13:02:38</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Asthma</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Respiratory system (460-519)\Chronic obstructive diseases (490-496)\(493) Asthma\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Respiratory system \ Chronic obstructive diseases \ Asthma</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Mild</modifier_name>
<modifier_key>\\i2b2_DIAG\Severity\Mild\</modifier_key>
<applied_path>\i2b2\Diagnoses\Respiratory system (460-519)\Chronic obstructive diseases (490-496)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of mild asthma diagnoses within the Respiratory system - Chronic obstructive diseases category, with a specificity scale of 0 and accuracy scale of 100, with the results being returned for any time period. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>High -Male-Princ@08:31:55</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>High school grad.</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\High school grad.\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ High school grad.</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>4</hlevel>
<item_name>Less than high school grad.</item_name>
<item_key>\\BIRN\BIRN\oasis\Demographics\Education\Less than high school grad.\</item_key>
<item_icon>LA</item_icon>
<tooltip>oasis \ Demographics \ Education \ Less than high school grad.</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Male</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\Male\</item_key>
<item_icon>LA</item_icon>
<tooltip>Demographic \ Gender \ Male</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Nutritional deficiences</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Nutritional deficiences (260-269)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Nutritional deficiences</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Nutritional deficiences (260-269)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find male patients who have been diagnosed with nutritional deficiencies (ICD code range 260-269) as their principal diagnosis, and have either a high school education or less than high school education. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circulatory sys@10:07:53</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) with a specificity scale of 0, any timing, and an accuracy scale of 100, within a single panel. This query is inverted, has a total of 1 item occurrence, and is a synonym-free ENC (Encounter) class item. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circulatory sys@10:08:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to the Circulatory system (ICD codes 390-459) with a specificity scale of 0, accuracy scale of 100, and no inversion applied, covering any time period, in a single panel with total occurrences of 1, and the item being a synonym of 'Circulatory system' in the Diagnoses section of the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Patient Instruc@17:58:26</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Hormones</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME148) hormones\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ hormones</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Patient Instructions</modifier_name>
<modifier_key>\\i2b2_MEDS\Medication\Instructions\</modifier_key>
<applied_path>\i2b2\Medications\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find any patient instruction related to hormones medications within the i2b2 database using the Medication Instructions path. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>numberofvisitPerson_#1000000045@10:11:11</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Primary hypertension NOS</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\Hypertensive disease (401-405)\(401) Essential hypertension\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system \ Hypertensive disease \ Essential hypertension</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Diabetes mellitus (e08-e13)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(E00-E89) Endo~c157\(E08-E13) Diab~1uxc\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Endocrine, nutritional and metabolic diseases (e00-e89) \ Diabetes mellitus (e08-e13)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>4</hlevel>
<item_name>Insulin</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME148) hormones\(LME150) antidiabetic agents\(LME152) insulin\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ hormones \ antidiabetic agents \ insulin</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of primary hypertension, who have been diagnosed with diabetes mellitus, and have a record of using insulin medication, within any time frame, with a high level of specificity and accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Syste-Syste-Syste@16:14:54</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Systemic lupus erythematosus (sle)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(M00-M99) Dise~6mvn\(M30-M36) Syst~csr9\(M32) Systemic~v244\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the musculoskeletal system and connective tissue (m00-m99) \ Systemic connective tissue disorders (m30-m36)
\ Systemic lupus erythematosus (sle)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Systemic sclerosis [scleroderma]</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(M00-M99) Dise~6mvn\(M30-M36) Syst~csr9\(M34) Systemic~2pxg\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the musculoskeletal system and connective tissue (m00-m99) \ Systemic connective tissue disorders (m30-m36)
\ Systemic sclerosis [scleroderma]</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>3</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Systemic sclerosis [scleroderma]</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(M00-M99) Dise~6mvn\(M30-M36) Syst~csr9\(M34) Systemic~2pxg\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the musculoskeletal system and connective tissue (m00-m99) \ Systemic connective tissue disorders (m30-m36)
\ Systemic sclerosis [scleroderma]</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find patients with a diagnosis of Systemic Lupus Erythematosus (SLE) and Systemic Sclerosis (Scleroderma) within the Diagnoses category of Diseases of the musculoskeletal system and connective tissue (m0-m9) and Systemic connective tissue disorders (m30-m36). The query will search for these conditions with 1000% accuracy and no specific timing constraints. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Gender-Princip@08:52:21</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Gender</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Gender\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Gender</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Income</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Income\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographics \ Income</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>2</hlevel>
<item_name>Marital Status</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Marital Status\</item_key>
<item_icon>FA</item_icon>
<tooltip>Demographic \ Marital Status</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Digestive system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Digestive system (520-579)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Digestive system</tooltip>
<class>ENC</class>
<constrain_by_modifier>
<modifier_name>Principal Diagnosis</modifier_name>
<modifier_key>\\i2b2_DIAG\Principal Diagnosis\</modifier_key>
<applied_path>\i2b2\Diagnoses\Digestive system (520-579)\%</applied_path>
</constrain_by_modifier>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with demographic information on gender, income, and marital status, as well as those with a principal diagnosis related to the digestive system (ICD-9 codes 52-579). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Diseases of the@14:53:30</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the circulatory system (i00-i99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find diagnoses related to diseases of the circulatory system, specifically those coded in the ICD10-ICD9 range from I0 to I9, with any level of specificity and a high level of accuracy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Disease-Coagula@14:54:35</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>1</hlevel>
<item_name>Diseases of the circulatory system (i00-i99)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(I00-I99) Dise~3w8h\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the circulatory system (i00-i99)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Coagulation Factor Studies</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB6) Coagulation\(LLB8) Coagulation Factor Studies\</item_key>
<item_icon>FA</item_icon>
<tooltip>Labtests \ Coagulation \ Coagulation Factor Studies</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with diagnoses related to diseases of the circulatory system (ICD codes I0-I9) and who have had Coagulation Factor Studies (LLB6, LLB8) performed as lab tests, with no specific time constraints for the diagnosis or lab test. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>O2 SATURATION (@17:46:22</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>5</hlevel>
<item_name>O2 SATURATION (LOINC:2711-0)</item_name>
<item_key>\\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB24) Blood Gases\O2 Sat\LOINC:2711-0\</item_key>
<item_icon>LA</item_icon>
<tooltip>Labtests \ Chemistry \ Blood Gases \ O2 Saturation (Group:O2 Sat) \ O2 SATURATION (LOINC:2711-0)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of O2 Saturation (LOINC:271-0) measurements recorded in the i2b2 database, with a specificity scale of 0 and an accuracy scale of 100, regardless of the timing of the measurement. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Influenza and p@10:48:47</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Influenza and pneumonia (j09-j18)</item_name>
<item_key>\\ICD10_ICD9\Diagnoses\(J00-J99) Dise~45pn\(J09-J18) Infl~7z2l\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Diseases of the respiratory system (j00-j99) \ Influenza and pneumonia (j09-j18)</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>Indian</item_name>
<item_key>\\i2b2_DEMO\i2b2\Demographics\Race\Indian\</item_key>
<item_icon>MA</item_icon>
<tooltip>Demographic \ Race \ Indian</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns4:query_definition>
``` |
I want to find all instances of patients with diagnoses of Influenza and pneumonia (J00-J9) in the ICD10_ICD9 database, and I want to filter the results to only include those who are of Indian race, according to their demographics. The specificity scale is set to 0, meaning all matches will be included, and the timing is set to ANY, indicating that the query applies to any time frame. The panel accuracy scale is set to 100, and the panel is not inverted. The total number of items included in the query is 1. The query name is "Influenza and p@10:48:47." |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circulatory sys@12:34:56</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to the Circulatory system (ICD codes 390-459) with a specificity scale of 0, accuracy scale of 100, and a panel timing of ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circulatory sys@12:35:31</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find any diagnoses related to the Circulatory system (ICD-9 codes 390-459) within the i2b2 dataset using the panel_number 1, with a specificity_scale of 0, panel_timing set to ANY, and a panel_accuracy_scale of 100, and the query_timing also set to ANY. The query is named "Circulatory sys@12:35:31" and the invert flag is set to 0. The item is located at the hlevel 2 and is represented by the icon "FA". The class of the item is ENC and it is not a synonym. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Circulatory sys@12:36:10</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>2</hlevel>
<item_name>Circulatory system</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Circulatory system (390-459)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Circulatory system</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find all diagnoses related to the circulatory system (ICD codes 390-459) within the i2b2 database, with any specificity scale, and with a high level of accuracy (1000%). This query is named "Circulatory sys@12:36:10" and is part of panel 1 in the query definition. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns3:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/">
<query_name>Psychos-Antipsy@14:14:24</query_name>
<query_timing>ANY</query_timing>
<specificity_scale>0</specificity_scale>
<panel>
<panel_number>1</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Psychosis</item_name>
<item_key>\\i2b2_DIAG\i2b2\Diagnoses\Mental Disorders (290-319)\Psychosis (290-299)\</item_key>
<item_icon>FA</item_icon>
<tooltip>Diagnoses \ Mental Disorders \ Psychosis</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
<panel>
<panel_number>2</panel_number>
<panel_timing>ANY</panel_timing>
<panel_accuracy_scale>100</panel_accuracy_scale>
<invert>0</invert>
<total_item_occurrences>1</total_item_occurrences>
<item>
<hlevel>3</hlevel>
<item_name>Antipsychotics</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME203) psychotherapeutic agents\(LME209) antipsychotics\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ psychotherapeutic agents \ antipsychotics</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
<item>
<hlevel>3</hlevel>
<item_name>CNS stimulants</item_name>
<item_key>\\i2b2_MEDS\i2b2\Medications\MUL\(LME203) psychotherapeutic agents\(LME218) CNS stimulants\</item_key>
<item_icon>FA</item_icon>
<tooltip>medications \ psychotherapeutic agents \ cns stimulants</tooltip>
<class>ENC</class>
<item_is_synonym>false</item_is_synonym>
</item>
</panel>
</ns3:query_definition>
``` |
I want to find patients with a diagnosis of psychosis and who have been prescribed antipsychotic medications or CNS stimulants, with a high level of specificity and accuracy, at any time during their medical history. |
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