# AUTOGENERATED BY NBDEV! DO NOT EDIT!

__all__ = ["index", "modules", "custom_doc_links", "git_url"]

index = {"Config": "00_learner.ipynb",
         "energy_score": "00_learner.ipynb",
         "EnsemblePredict": "00_learner.ipynb",
         "EnsembleLearner": "00_learner.ipynb",
         "ARCHITECTURES": "01_models.ipynb",
         "ENCODERS": "01_models.ipynb",
         "get_pretrained_options": "01_models.ipynb",
         "create_smp_model": "01_models.ipynb",
         "save_smp_model": "01_models.ipynb",
         "load_smp_model": "01_models.ipynb",
         "show": "02_data.ipynb",
         "preprocess_mask": "02_data.ipynb",
         "DeformationField": "02_data.ipynb",
         "BaseDataset": "02_data.ipynb",
         "RandomTileDataset": "02_data.ipynb",
         "TileDataset": "02_data.ipynb",
         "Dice": "03_metrics.ipynb",
         "Iou": "03_metrics.ipynb",
         "Recorder.plot_metrics": "03_metrics.ipynb",
         "LOSSES": "05_losses.ipynb",
         "FastaiLoss": "05_losses.ipynb",
         "WeightedLoss": "05_losses.ipynb",
         "JointLoss": "05_losses.ipynb",
         "get_loss": "05_losses.ipynb",
         "unzip": "06_utils.ipynb",
         "install_package": "06_utils.ipynb",
         "import_package": "06_utils.ipynb",
         "compose_albumentations": "06_utils.ipynb",
         "ensemble_results": "06_utils.ipynb",
         "plot_results": "06_utils.ipynb",
         "iou": "06_utils.ipynb",
         "label_mask": "06_utils.ipynb",
         "get_candidates": "06_utils.ipynb",
         "iou_mapping": "06_utils.ipynb",
         "calculate_roi_measures": "06_utils.ipynb",
         "export_roi_set": "06_utils.ipynb",
         "calc_iterations": "06_utils.ipynb",
         "get_label_fn": "06_utils.ipynb",
         "save_mask": "06_utils.ipynb",
         "save_unc": "06_utils.ipynb",
         "rot90": "07_tta.ipynb",
         "hflip": "07_tta.ipynb",
         "vflip": "07_tta.ipynb",
         "BaseTransform": "07_tta.ipynb",
         "Chain": "07_tta.ipynb",
         "Transformer": "07_tta.ipynb",
         "Compose": "07_tta.ipynb",
         "Merger": "07_tta.ipynb",
         "HorizontalFlip": "07_tta.ipynb",
         "VerticalFlip": "07_tta.ipynb",
         "Rotate90": "07_tta.ipynb",
         "GRID_COLS": "08_gui.ipynb",
         "set_css_in_cell_output": "08_gui.ipynb",
         "tooltip_css": "08_gui.ipynb",
         "ZipUpload": "08_gui.ipynb",
         "ItemsPerPage": "08_gui.ipynb",
         "BaseParamWidget": "08_gui.ipynb",
         "BaseUI": "08_gui.ipynb",
         "PathSelector": "08_gui.ipynb",
         "PathDownloads": "08_gui.ipynb",
         "PathConfig": "08_gui.ipynb",
         "GTDataSB": "08_gui.ipynb",
         "GTEstSB": "08_gui.ipynb",
         "GTEstUI": "08_gui.ipynb",
         "TrainDataSB": "08_gui.ipynb",
         "TrainModelSB": "08_gui.ipynb",
         "TrainValidSB": "08_gui.ipynb",
         "LRWidget": "08_gui.ipynb",
         "BasePopUpParamWidget": "08_gui.ipynb",
         "ParamWidget": "08_gui.ipynb",
         "MWWidget": "08_gui.ipynb",
         "TrainUI": "08_gui.ipynb",
         "PredInputSB": "08_gui.ipynb",
         "PredSB": "08_gui.ipynb",
         "PredUI": "08_gui.ipynb",
         "GUI": "08_gui.ipynb",
         "import_sitk": "09_gt.ipynb",
         "staple": "09_gt.ipynb",
         "m_voting": "09_gt.ipynb",
         "msk_show": "09_gt.ipynb",
         "GTEstimator": "09_gt.ipynb"}

modules = ["learner.py",
           "models.py",
           "data.py",
           "metrics.py",
           "losses.py",
           "utils.py",
           "tta.py",
           "gui.py",
           "gt.py"]

doc_url = "https://matjesg.github.io/deepflash2/"

git_url = "https://github.com/matjesg/deepflash2/tree/master/"

def custom_doc_links(name): return None
