              logger.trace("Retrieving for second pass: %s",  # type: ignore[attr-defined]
                           retval.filename)
          return retval
  
      def process_batch(self, batch: "AlignerBatch") -> List[np.ndarray]:
          """ Pre process a batch object for re-aligning through the aligner.
  
          Parameters
          ----------
          batch: :class:`AlignerBatch`
 
</s> remove     def add_batch(self, batch: "AlignerBatch") -> None:
 </s> add     def add_batch(self, batch: AlignerBatch) -> None: </s> remove     def _re_insert_filtered(self, batch: "AlignerBatch", masks: np.ndarray) -> np.ndarray:
 </s> add     def _re_insert_filtered(self, batch: AlignerBatch, masks: np.ndarray) -> np.ndarray: </s> remove     def crop(self, batch: AlignerBatch, center_scale: np.ndarray) -> List[np.ndarray]:
 </s> add     def crop(self, batch: AlignerBatch, center_scale: np.ndarray) -> list[np.ndarray]: </s> remove     def _transform_to_frame(self, batch: "AlignerBatch") -> np.ndarray:
 </s> add     def _transform_to_frame(self, batch: AlignerBatch) -> np.ndarray: </s> remove     def _create_targets(self, batch: np.ndarray) -> List[np.ndarray]:
 </s> add     def _create_targets(self, batch: np.ndarray) -> list[np.ndarray]:
    def process_batch(self, batch: AlignerBatch) -> list[np.ndarray]:
              logger.trace("Retrieving for second pass: %s",  # type: ignore[attr-defined]
                           retval.filename)
          return retval
  
    def process_batch(self, batch: AlignerBatch) -> list[np.ndarray]:
          """ Pre process a batch object for re-aligning through the aligner.
  
          Parameters
          ----------
          batch: :class:`AlignerBatch`
keep keep keep keep replace keep keep keep keep keep
 Rebase code (#1326)

* Remove tensorflow_probability requirement

* setup.py - fix progress bars

* requirements.txt: Remove pre python 3.9 packages

* update apple requirements.txt

* update INSTALL.md

* Remove python<3.9 code

* setup.py - fix Windows Installer

* typing: python3.9 compliant

* Update pytest and readthedocs python versions

* typing fixes

* Python Version updates
  - Reduce max version to 3.10
  - Default to 3.10 in installers
  - Remove incompatible 3.11 tests

* Update dependencies

* Downgrade imageio dep for Windows

* typing: merge optional unions and fixes

* Updates
  - min python version 3.10
  - typing to python 3.10 spec
  - remove pre-tf2.10 code
  - Add conda tests

* train: re-enable optimizer saving

* Update dockerfiles

* Update setup.py
  - Apple Conda deps to setup.py
  - Better Cuda + dependency handling

* bugfix: Patch logging to prevent Autograph errors

* Update dockerfiles

* Setup.py - Setup.py - stdout to utf-8

* Add more OSes to github Actions

* suppress mac-os end to end test 
plugins/extract/align/_base/processing.py