 INSERT INTO source VALUES (2571, 'gadfly_transcript_cgid', 1, 'N', 4);
 INSERT INTO source VALUES (2572, 'gadfly_translation_cgid', 1, 'N', 4);
 
+# ciona intestinalis source 
+INSERT INTO source VALUES (2601, 'c_int_proteins_jgi_v1', 1, 'N', 4);
 
 
 

INSERT INTO source VALUES (2420, 'wormbase_transcript', 1, 'N', 4);
INSERT INTO source VALUES (2440, 'wormbase_pseudogene', 1, 'N', 4);


INSERT INTO source VALUES (2500, 'flybase_gff', 1, 'Y', 4);

INSERT INTO source VALUES (2510, 'flybase_gene_id', 1, 'N', 4);
INSERT INTO source VALUES (2520, 'flybase_transcript_id', 1, 'N', 4);
INSERT INTO source VALUES (2530, 'flybase_polypeptide_id', 1, 'N', 4);

#### SeqSquirt

## Uniprot
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
 (1, 7719, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_sprot.dat.gz', now(), now(), "UniProtParser");
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
 (2, 7719, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_trembl.dat.gz', now(), now(), "UniProtParser");

##       refseq
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
(3, 7719,'ftp://ftp.ncbi.nih.gov/refseq/release/vertebrate_other/vertebrate_other1.protein.gpff.gz',  now(), now(), "RefSeqGPFFParser");
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
(3, 7719,'ftp://ftp.ncbi.nih.gov/refseq/release/vertebrate_other/vertebrate_other2.protein.gpff.gz',  now(), now(), "RefSeqGPFFParser");
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
(3, 7719,'ftp://ftp.ncbi.nih.gov/refseq/release/vertebrate_other/vertebrate_other3.protein.gpff.gz',  now(), now(), "RefSeqGPFFParser");
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
 (4, 7719,'ftp://ftp.ncbi.nih.gov/refseq/release/vertebrate_other/vertebrate_other1.rna.fna.gz',  now(), now(), "RefSeqParser");
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
 (4, 7719,'ftp://ftp.ncbi.nih.gov/refseq/release/vertebrate_other/vertebrate_other2.rna.fna.gz',  now(), now(), "RefSeqParser");
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
 (4, 7719,'ftp://ftp.ncbi.nih.gov/refseq/release/vertebrate_other/vertebrate_other3.rna.fna.gz',  now(), now(), "RefSeqParser");

##       GO
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
(1070, 7719,'ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/gene_association.goa_uniprot.gz', now(), now(), "GOParser");

##      Interpro
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
(1300, 7719,'ftp://ftp.ebi.ac.uk/pub/databases/interpro/interpro.xml.gz', now(), now(), "InterproParser");


##      UniGene
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser) VALUES\
(6, 7719,'ftp://ftp.ncbi.nih.gov/repository/UniGene/Cin.seq.uniq.gz ftp://ftp.ncbi.nih.gov/repository/UniGene/Cin.data.gz',  now(), now(), "UniGeneParser");

## xrefs to protein-annotation from JGI on OLDER assembly version v1 
INSERT INTO source_url (source_id, species_id, url, file_modified_date, upload_date, parser)\
VALUES (2601, 7719,'ftp://ftp.jgi-psf.org/pub/JGI_data/Ciona/v1.0/ciona.prot.fasta.gz',now(),now(),'FastaProteinSeqParser');

################################################################################

