   score double,
   
   PRIMARY KEY (	repeat_feature_id ),
-  KEY contig_idx( contig_id, contig_start, analysis_id ),
+  KEY contig_idx( contig_id, contig_start ),
   KEY repeat_idx( repeat_consensus_id, contig_id, contig_start ),
   KEY analysis_idx( analysis_id )
 ) MAX_ROWS=100000000 AVG_ROW_LENGTH=80;


  PRIMARY KEY (	protein_align_feature_id ),
  KEY hit_idx( hit_name ),
  KEY ctg_idx( contig_id, contig_start, analysis_id )
) MAX_ROWS=100000000 AVG_ROW_LENGTH=80;




  PRIMARY KEY ( dna_align_feature_id ),
  KEY hit_idx( hit_name ),
  KEY ctg_idx( contig_id, contig_start ),
  KEY ana_idx( analysis_id )
) MAX_ROWS=100000000 AVG_ROW_LENGTH=80;


