anchor.diff:  }
   
   else	{
  -	logger.debug("Doing transitional");
  +	
   	//process the transitional report
   	ResultsContainer resultsContainer = (ResultsContainer) session.getAttribute(sample);
   	String mode =  (String) request.getParameter("report");
  
positive.code: gov.nih.nci.nautilus.constants.NautilusConstants,
  java.text.DecimalFormat,
  java.util.*,
  gov.nih.nci.nautilus.ui.ReportGenerator,
  org.apache.log4j.Logger" %>
  
  <% /* dont need all these imports really */ %>
  
  
negative.code: //get the results container from the session with sample as key
  if(session.getAttribute(sample) == null)
  {
    	
    QueryCollection queryCollection = null;
    if(request.getAttribute(NautilusConstants.QUERY_KEY)==null)	{
  	links = "<a href=\"jsp/geneViewReportCSV.jsp\">[Download this report for Excel]</a> | <a href=\"javascript:void(window.print())\">[Print Report]</a> | <a href=\"#queryInfo\">[Query Info]</a> | <a href=\"menu.do\">[Back to Menu]</a>\n";	
      queryCollection = (QueryCollection) (session.getAttribute(NautilusConstants.QUERY_KEY));
    }
    else	{
      queryCollection = (QueryCollection)(request.getAttribute(NautilusConstants.QUERY_KEY));
      links = "<a href=\"javascript:window.close()\">[Close Window]</a> | <a href=\"javascript:void(window.print())\">[Print Report]</a> | <a href=\"#queryInfo\">[Query Info]</a>\n";
    }
  
  	CompoundQuery myCompoundQuery = queryCollection.getCompoundQuery();
  