anchor.diff:  
   <tmpl:stringTemplateWrap name="page">
   
  -
   <script type="text/javascript">
  -    jQuery(document).ready(function()
  -    {
  +    $(document).ready(function() {
           $("#squery").tablesorter({});
       });
   </script>
  
positive.code: 
      <jsp:include page="../includes/query-includes.jsp"/>
  
  <script type="text/javascript">
  $(function() {
  	$("a.lightbox").lightBox(); // Select all links with lightbox class
  });
  </script>
  
  <!--[if IE]><script language="javascript" type="text/javascript" src="${pageContext.request.contextPath}/scripts/excanvas.min.js"></script><![endif]-->
  <script language="javascript"
          type="text/javascript"
          src="${pageContext.request.contextPath}/scripts/jquery.flot.atlas.js"></script>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/jquery.pagination.js"></script>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/jquery.tablesorter.min.js"></script>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/jquery.selectboxes.min.js"></script>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/jquery-ui-1.7.2.atlas.min.js"></script>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/common-query.js"></script>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/experiment.js"></script>
  
  <link rel="stylesheet" href="${pageContext.request.contextPath}/structured-query.css" type="text/css"/>
  <link rel="stylesheet" href="${pageContext.request.contextPath}/listview.css" type="text/css"/>
  <link rel="stylesheet" href="${pageContext.request.contextPath}/geneView.css" type="text/css"/>
  <link rel="stylesheet" href="${pageContext.request.contextPath}/jquery-ui-1.7.2.atlas.css" type="text/css"/>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/jquery-lightbox-0.5/js/jquery.lightbox-0.5.js"></script>
  
  <style type="text/css">
      @media print {
  
negative.code:         </div>
  
          <div class="hrClear" style="margin-top:20px;width:100%;">
              <hr/>
  
              <table id="squery" class="tablesorter">
                  <thead>
                  <tr class="header">
                      <th style="border-left:none" class="padded">Assay</th>
                      <th style="border-left:none" class="padded">Array</th>
                      <c:forEach var="factor" items="${experimentDesign.factors}" varStatus="r">
                          <th>${f:escapeXml(atlasProperties.curatedEfs[factor.name])}</th>
                      </c:forEach>
                  </tr>
                  </thead>
  
                  <tbody>
  
                  <c:forEach var="assay" items="${experimentDesign.assays}" varStatus="r">
                      <tr>
                          <td class="padded genename" style="border-left:none">
                                  ${assay.name}
                          </td>
                          <td>${assay.arrayDesignAccession}</td>
                          <c:forEach var="factorValue" items="${assay.factorValues}" varStatus="r">
                              <td class="padded wrapok">
                                      ${factorValue}
                              </td>
                          </c:forEach>
                      </tr>
                  </c:forEach>
                  </tbody>
              </table>
          </div>
  
      </div>
  </div>
  