anchor.diff:  			function getExpBitsHelp(event) {showWideHelpTip(event,text3); }
   		</script>
   
  -
  -<display:table name="coexpressedGenes" class="list" sort="list"
  -	requestURI="" id="foundGenes"
  -	decorator="ubic.gemma.web.taglib.displaytag.coexpressionSearch.CoexpressionWrapper"
  -	pagesize="200">
  -	<display:column property="nameLink" sortable="true"
  -		sortProperty="geneName" titleKey="gene.name" />
  -	<display:column property="geneOfficialName" maxLength="50"
  -		sortable="true" titleKey="gene.officialName" />
  -	<display:column property="linkCount" sortable="true"
  -		sortProperty="maxLinkCount"
  -		title="Support <a class='helpLink' name='?' href='' onclick='getCoexpressionHelp(event);return false;'>
  -					<img src='/Gemma/images/help.png' /> </a>" />
  -	<display:column property="goOverlap" sortable="true"
  -		title="GO overlap <a  class='helpLink' name='?' href='' onclick='getOverlapHelp(event);return false;'>
  -					<img src='/Gemma/images/help.png' /> </a>" />
  -	<display:column property="experimentBitImage" sortable="false"
  -		title="exps <a  class='helpLink' name='?' href='' onclick='getExpBitsHelp(event);return false;'>
  -					<img src='/Gemma/images/help.png' /> </a>" />
  -	<display:setProperty name="basic.empty.showtable" value="false" />
  -</display:table>
  -
  +<div id="coexpressed-genes" style="width:600px;">
  +	<display:table name="coexpressedGenes" class="list" sort="list" requestURI="" id="foundGenes"
  +		decorator="ubic.gemma.web.taglib.displaytag.coexpressionSearch.CoexpressionWrapper" pagesize="200">
  +		<display:column property="nameLink" sortable="true" sortProperty="geneName" titleKey="gene.name" />
  +		<display:column property="geneOfficialName" maxLength="50" sortable="true" titleKey="gene.officialName" />
  +		<display:column property="linkCount" sortable="true" sortProperty="maxLinkCount"
  +			title="Support <a class='helpLink' name='?' href='' onclick='getCoexpressionHelp(event);return false;'>
  +					<img src='/Gemma/images/help.png' /> </a>" />
  +		<display:column property="goOverlap" sortable="true"
  +			title="GO overlap <a  class='helpLink' name='?' href='' onclick='getOverlapHelp(event);return false;'>
  +					<img src='/Gemma/images/help.png' /> </a>" />
  +		<display:column property="experimentBitImage" sortable="false"
  +			title="exps <a  class='helpLink' name='?' href='' onclick='getExpBitsHelp(event);return false;'>
  +					<img src='/Gemma/images/help.png' /> </a>" />
  +		<display:setProperty name="basic.empty.showtable" value="false" />
  +	</display:table>
  +</div>
   
   <authz:authorize ifAnyGranted="admin">
   
  
positive.code: 		<c:if test="${numLinkedAlignedExpressionExperiments != 0}">
  
  			<!-- Toggles for the expand/hide datasetList table -->
  			<span class="alignedDatasetList"
  				onclick="return toggleVisibility('alignedDatasetList')"> <img
  					src="/Gemma/images/chart_organisation_add.png" /> </span>
  			<span class="alignedDatasetList" style="display:none"
  				onclick="return toggleVisibility('alignedDatasetList')"> <img
  					src="/Gemma/images/chart_organisation_delete.png" /> </span>
  		</c:if>
  		<b> <c:out value="${numUsedAlignedExpressionExperiments}" />
  			datasets had relevent Probe Aligned Region Coexpression data <c:if
  				test="${numLinkedAlignedExpressionExperiments != 0}">
  				<a href="#" onclick="return toggleVisibility('alignedDatasetList')">(details)</a>
  			</c:if> </b>
  
  		<br />
  		<div class="alignedDatasetList" style="display:none">
  
  			<display:table pagesize="100" name="alignedExpressionExperiments"
  				sort="list" defaultsort="2" class="list" requestURI=""
  				id="alignedExpressionExperimentList"
  				decorator="ubic.gemma.web.taglib.displaytag.expression.experiment.ExpressionExperimentWrapper">
  
  				<display:column property="rawCoexpressionLinkCount" sortable="true"
  					defaultorder="descending"
  					titleKey="expressionExperiment.rawLinkcount" />
  
  				<display:column property="coexpressionLinkCount" sortable="true"
  					defaultorder="descending" titleKey="expressionExperiment.linkcount" />
  
  				<display:column property="nameLink" sortable="true"
  					sortProperty="name" titleKey="expressionExperiment.name" />
  
  				<display:column property="shortName" sortable="true"
  					titleKey="expressionExperiment.shortName" />
  
  				<authz:authorize ifAnyGranted="admin">
  					<display:column property="arrayDesignLink" sortable="true"
  						title="Arrays" />
  				</authz:authorize>
  
  
  				<display:column property="assaysLink" sortable="true"
  					titleKey="bioAssays.title" />
  
  				<display:setProperty name="basic.empty.showtable" value="false" />
  			</display:table>
  
negative.code: 							document.getElementById('geneIdSearch').value = 'false';
  						}
  						">
  							<option value="">
  								[Select a gene or refine the search]
  							</option>
  							<option value="Refine Search">
  								[Refine Search]
  							</option>
  							<c:forEach items="${genes}" var="gene">
  								<option value="${gene.id}">
  									${gene.officialSymbol} : ${gene.officialName }
  								</option>
  							</c:forEach>
  						</select>
  
  						<input id="searchStringTextInput" disabled style="display:none" type="text" size=15
  							name="<c:out value="${status.expression}"/>" value="${status.value}" />
  						<input id="geneIdSearch" style="display:none" type="text" size=15 name="geneIdSearch" value="true" />
  					</spring:bind>
  					<spring:bind path="coexpressionSearchCommand.exactSearch">
  						<input style="display:none" id="exactSearchCheckbox" type="checkbox" name="${status.expression}"
  							<c:if test="${status.value == 'on'}">checked="checked"</c:if> />
  						<input type="hidden" name="_<c:out value="${status.expression}"/>">
  					</spring:bind>
  					<span id="exactSearchLabel" style="display:none"> Exact search </span>
  				</c:if>
  
  
  
  				<c:if test="${genes == null}">
  					<spring:bind path="coexpressionSearchCommand.searchString">
  						<input type="text" size=15 name="<c:out value="${status.expression}"/>"
  							value="<c:out value="${sourceGene.officialSymbol}"/>" />
  					</spring:bind>
  					<spring:bind path="coexpressionSearchCommand.exactSearch">
  						<input id="exactSearchCheckbox" type="checkbox" name="${status.expression}"
  							<c:if test="${status.value == 'on'}">checked="checked"</c:if> />
  						<input type="hidden" name="_<c:out value="${status.expression}"/>">
  					</spring:bind>
  					Exact search
  				</c:if>
  			</td>
  			<td>
  				<a class="helpLink" href="?"
  					onclick="showHelpTip(event, 
  				'Term(s) to identify a gene; check \'exact search\' if you know the official symbol for the gene.'); return false">
  					<img src="/Gemma/images/help.png" /> </a>
  			</td>
  		</tr>
  
  		<tr>
  			<td class='label' valign="top">
  				<b> Experiment keywords </b>
  			</td>
  			<td>
  				<spring:bind path="coexpressionSearchCommand.eeSearchString">
  					<input type="text" size=30 name="<c:out value="${status.expression}"/>" value="<c:out value="${status.value}"/>" />
  				</spring:bind>
  			</td>
  			<td>
  				<a class="helpLink" href="?"
  					onclick="showHelpTip(event, 
  				'keywords of experiments to use in the coexpression analysis'); return false"> <img
  						src="/Gemma/images/help.png" /> </a>
  			</td>
  		</tr>
  
  		<tr>
  			<td class='label' valign="top">
  				<b> <fmt:message key="label.species" /> </b>
  			</td>
  
  
  			<td>
  				<spring:bind path="coexpressionSearchCommand.taxon">
  					<select name="${status.expression}">
  						<c:forEach items="${taxa}" var="taxon">
  							<spring:transform value="${taxon}" var="scientificName" />
  							<option value="${scientificName}" <c:if test="${status.value == scientificName}">selected </c:if>>
  								${scientificName}
  							</option>
  						</c:forEach>
  					</select>
  
  				</spring:bind>
  			</td>
  			<td>
  				<a class="helpLink" href="?"
  					onclick="showHelpTip(event, 
  				'Species to use in the coexpression search'); return false"> <img
  						src="/Gemma/images/help.png" /> </a>
  			</td>
  		</tr>
  
  		<tr>
  			<td class='label' valign="top">
  				<b> <fmt:message key="label.stringency" /> </b>
  			</td>
  			<td>
  				<spring:bind path="coexpressionSearchCommand.stringency">
  					<input type="text" size=1 name="<c:out value="${status.expression}"/>" value="<c:out value="${status.value}"/>" />
  				</spring:bind>
  			</td>
  			<td>
  				<a class="helpLink" href="?"
  					onclick="showHelpTip(event, 
  				'The number of datasets (experiments) that coexpress the gene before it is considered a positive result'); return false">
  					<img src="/Gemma/images/help.png" /> </a>
  			</td>
  		</tr>
  		<tr>
  			<td>
  				&nbsp;
  			</td>
  			<td>
  				<input type="submit" class="button" name="submit" value="<fmt:message key="button.search"/>" />
  			</td>
  			<td>
  				&nbsp;
  			</td>
  		</tr>
  
  	</table>
  </form>
  
  <c:if test="${coexpressedGenes != null}">
  	<c:if test="${numLinkedExpressionExperiments != 0}">
  
  		<script type='text/javascript' src='/Gemma/scripts/prototype.js'></script>
  		<script type='text/javascript' src='/Gemma/scripts/expandableObjects.js'></script>
  
  		<!-- Toggles for the expand/hide datasetList table -->
  		<span class="datasetList" onclick="return toggleVisibility('datasetList')"> <img
  				src="/Gemma/images/chart_organisation_add.png" /> </span>
  		<span class="datasetList" style="display:none" onclick="return toggleVisibility('datasetList')"> <img
  				src="/Gemma/images/chart_organisation_delete.png" /> </span>
  	</c:if>
  	<b> <c:out value="${numUsedExpressionExperiments}" /> datasets had relevent coexpression data <br /> &emsp;&nbsp; <c:out
  			value="${numQuerySpecificEEs}" /> datasets probes for <c:out value="${sourceGene.officialSymbol}" /> without detected
  		cross-hybridization potential. <c:if test="${numLinkedExpressionExperiments != 0}">
  			<a href="#" onclick="return toggleVisibility('datasetList')">(details)</a>
  		</c:if> </b>
  
  	<br />
  	<div class="datasetList" style="display:none">
  
  		<display:table pagesize="200" name="expressionExperiments" sort="list" defaultsort="2" class="list" requestURI=""
  			id="expressionExperimentList"
  			decorator="ubic.gemma.web.taglib.displaytag.expression.experiment.ExpressionExperimentWrapper">
  
  			<display:column property="rawCoexpressionLinkCount" sortable="true" defaultorder="descending"
  				titleKey="expressionExperiment.rawLinkcount" />
  
  			<display:column property="coexpressionLinkCount" sortable="true" defaultorder="ascending"
  				titleKey="expressionExperiment.linkcount" />
  
  			<display:column property="nameLink" sortable="true" sortProperty="name" titleKey="expressionExperiment.name" />
  
  			<display:column property="shortName" sortable="true" titleKey="expressionExperiment.shortName" />
  
  			<display:column property="specific" sortable="true" titleKey="expressionExperiment.specific" />
  
  
  			<authz:authorize ifAnyGranted="admin">
  				<display:column property="arrayDesignLink" sortable="true" title="Arrays" />
  			</authz:authorize>
  
  
  			<display:column property="assaysLink" sortable="true" titleKey="bioAssays.title" />
  
  			<display:setProperty name="basic.empty.showtable" value="false" />
  		</display:table>
  