anchor.diff:  
   <tmpl:stringTemplateWrap name="page">
   
  -
   <script type="text/javascript">
  -    jQuery(document).ready(function()
  -    {
  +    $(document).ready(function() {
           $("#squery").tablesorter({});
       });
   </script>
  
positive.code:         </div>
  
          <div class="hrClear" style="margin-top:20px;width:100%;">
          <hr/>
  
          <table id="squery" class="tablesorter">
          <thead>
              <tr class="header">
                  <th style="border-left:none" class="padded">Assay</th>
                  <th style="border-left:none" class="padded">Array</th>
                  <c:forEach var="factor" items="${experimentDesign.factors}" varStatus="r">
  		<th>${f:escapeXml(atlasProperties.curatedEfs[factor.name])}</th>
                  </c:forEach>
              </tr>
          </thead>
  
          <tbody>
  
          <c:forEach var="assay" items="${experimentDesign.assays}" varStatus="r">
              <tr>
                  <td class="padded genename" style="border-left:none">
                          ${assay.name}
                  </td>
                  <td>${assay.arrayDesignAccession}</td>
                  <c:forEach var="factorValue" items="${assay.factorValues}" varStatus="r">
                  <td class="padded wrapok">
                          ${factorValue}
                  </td>
                  </c:forEach>
              </tr>
          </c:forEach>
          </tbody>
      </table>
      </div>
  
      </div>
  </div>
  
negative.code: 
      <jsp:include page="../includes/query-includes.jsp"/>
  
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/jquery.tablesorter.min.js"></script>
  <script type="text/javascript" src="${pageContext.request.contextPath}/scripts/jquery-ui-1.7.2.atlas.min.js"></script>
  
  <link rel="stylesheet" href="${pageContext.request.contextPath}/structured-query.css" type="text/css"/>
  <link rel="stylesheet" href="${pageContext.request.contextPath}/listview.css" type="text/css"/>
  <link rel="stylesheet" href="${pageContext.request.contextPath}/geneView.css" type="text/css"/>
  <link rel="stylesheet" href="${pageContext.request.contextPath}/jquery-ui-1.7.2.atlas.css" type="text/css"/>
  
  <style type="text/css">
      @media print {
  