anchor.diff:  Gem::Specification.new do |s|
     s.name = 'bio'
  -  s.version = "1.2.9.9001"
  +  s.version = "1.2.9.9501"
   
     s.author = "BioRuby project"
     s.email = "staff@bioruby.org"
  
positive.code:   s.platform = Gem::Platform::RUBY
    s.files = [
      <% ###### Below is executed in ERB environment ######
      # Gets file list from the "git-ls-files" command.
      files = `git-ls-files 2>/dev/null`.to_s.split(/\r?\n/)
      files.delete_if { |x| x.empty? }
      # When git-ls-files isn't available, creates a list from current files.
      unless $?.success? or files.size <= 0 then
  
negative.code:           rdoc_files = [ 'README.rdoc', 'README_DEV.rdoc',
                           'doc/Changes-1.3.rdoc' ]
          end
          rdoc_files.push "ChangeLog" unless rdoc_files.include?("ChangeLog")
          rdoc_files.collect { |x| x.dump }.join(",\n    ")
          ###### Above is executed in ERB environment ######
      %>
    ]
    s.rdoc_options << '--main' << 'README.rdoc'
    s.rdoc_options << '--title' << 'BioRuby API documentation'
    s.rdoc_options << '--exclude' << '\.yaml\z'
    s.rdoc_options << '--line-numbers' << '--inline-source'
  
    s.require_path = 'lib'
    s.autorequire = 'bio'
  