anchor.diff:     Maximum number of aligned sequences to keep
   |
   %> -->
  -			</pre>
  +   </pre>
             </fieldset>
           </form>
         </div>
  
positive.code: 
    <body> 
      <div class="container">
  		<div class="banner" >BLAST Sequence(s)</div>	   
      <div class='extra_container'>
  		<form method="post" action="/">
            <div class="entryfield">
  			<textarea name="sequence" id="sequence" rows="10" cols="" placeholder="Paste your sequence(s) here..." ></textarea>
  		  </div>
  	      <fieldset class="blastmethods" >
   		    <div class="span-3">
         		  <input type="radio" name="method" value="blastp" id="blastp" class="span-1" title="Protein query; protein database."/>
          	  <label for="blastp" class="span-1" title="Protein query; protein database.">blastp</label>
    		    </div>
         	    <div class="span-3 clear">
         		  <input type="radio" name="method" value="tblastn" id="tblastn" class="span-1"  title="Protein query; six-frame translated nucleotide database." />
          	  <label for="tblastn" class="span-1" title="Protein query; six-frame translated nucleotide database.">tblastn</label>
   		    </div>
          	<div class="span-3 clear">
          	  <input type="radio" name="method" value="blastn" id="blastn" class="span-1" title="Nucleotide query; nucleotide database."/>
                <label for="blastn" class="span-1" title="Nucleotide query; nucleotide database.">blastn</label>
           	</div>
              <div class="span-3 clear">
                <input type="radio" name="method" value="blastx" id="blastx" class="span-1" title="Translated nucleotide query; protein database."/>
                <label for="blastx" class="span-1" title="Six-frame translated nucleotide query; protein database.">blastx</label>
  			</div>
              <div class="span-3 clear">
                <input type="radio" name="method" value="tblastx" id="tblastx" class="span-1" title="Six-frame translated nucleotide query; six-frame translated nucleotide database"/>
                <label for="tblastx" class="span-1" title="Six-frame translated nucleotide query; six-frame translated nucleotide database">tblastx</label>
  			</div>
            </fieldset>
         </div>
  	   <div class='extra_container'>
            <fieldset class="nucleotide databases">
  			<h2>Nucleotide databases</h2>
  <!--			  <input type="checkbox" class="span-1 clear" id="fff" name="asdfsadfxz" value="fff"/>
  			  <label for="fff" class="span-5 last">name placeholder 3</label>
  	-->		
  
  			<!--  Database list is actually dynamically loaded -->
  		          <% SequenceServer.get_db(:nucleotide).each_with_index do |db, i| %>
                    <input type="checkbox" class="dbcheckbox" id="pdb<%=i%>" name="db[nucleotide][]" value="<%=i%>"/>
                    <label for="ndb<%=i%>" class="dbdescription"><%= SequenceServer.db_title(db) or SequenceServer.db_name(db)%></label>
                    <% end %>
            </fieldset>
  			<fieldset class="protein databases">
  			<h2>Protein databases</h2>	
  <!--			  <input type="checkbox" class="span-1 clear" id="pdbasdf" name="asdfsadfxz" value="asdf"/>
      			  <label for="pdbasdf"   class="span-5 last">name placeholder</label>
  	    		  <input type="checkbox" class="span-1 clear" id="ffpdbasdf" name="asdfsadfxz" value="asdf"/>
  		     	  <label for="ffpdbasdf" class="span-5 last">name placeholder 2</label>
  	-->		   
  			<!--  Database list is actually dynamically loaded-->
                    <% SequenceServer.get_db(:protein).each_with_index do |db, i| %>
                    <input type="checkbox" class="dbcheckbox" id="pdb<%=i%>" name="db[protein][]" value="<%=i%>"/>
                    <label for="pdb<%=i%>" class="dbdescription"><%= SequenceServer.db_title(db) or SequenceServer.db_name(db)%></label>
                    <% end %>
            </fieldset>
  
  	      <div class="submit_button">
              <input type="submit" value="Blast!"/>
            </div>
  	</div>
            <fieldset class="advanced" >
              <h2>Advanced parameters (optional)</h2>
              <input type="text" name="advanced" id="advanced"/>
  			<span class='small'>Info for advanced params (hidden by default)</span><pre style='font-size: 8px;'>
  <!-- <%=        require 'cgi'
  			CGI.escapeHTML %|
  -evalue <Real>
     Expectation value (E) threshold for saving hits 
     Default = `10'
  
negative.code:     }
  
      .blastmethods {
        float						: left;
        width						: 15%;
        background				: #3f4555;
        border					: none;
        margin					: 0 2% 2% 0;
        border-top-right-radius	: 10px;
        border-top-left-radius	: 0px;
        border-bottom-right-radius: 10px;
        border-bottom-left-radius	:  0px;
        font-size					: 1.5em; font-family: georgia, serif; color: white;
      }
      .database_container {
        float  :left;
        clear  :both;
        width  :76%;
      }
      .databases_and_submit_container {
  }
  
       .databases {
        width       : 40%;
        background  : #3f4555;
        border      : none;
        margin      : 2%;
        border-radius  :10px;
        font-family : georgia, serif;
        color       : white;
        margin-top  :0;
      }
      .nucleotide {
        clear    :left;
        float    :left;
      }
      .protein {
        position  :relative;
       }
  
      .dbcheckbox {   /* within each "database box" */
         float:left;
         clear:both;
       }
      .dbdescription {
        float:left;
       }
  
      .submit_button {
        text-align: right;
     text-vertical-align: bottom;
        padding: 2%;
      }
      .submit_button input {
        background		: #3f4555;
        border			: 2px solid white;
        border-radius		: 10px;
        color				: white;
        padding			: 1%;
        cursor			: pointer;
        font-size			: 1.5em;
        font-family		: georgia, serif;
      }
     .submit_button input:active {
        color: #1f2126;
        border: 2px solid black;
     }
     .submit_button input:hover {
        color: #1f2126;
  
     }
  
  .advanced {
  