     _createOrderingMenu: ->
       menuOrdering = new MenuBuilder("Ordering")
       menuOrdering.addNode "ID", =>
-        @msa.ordering.orderSeqsAfterScheme "numeric"
+        @msa.ordering.setOrdering "numeric"
 
       menuOrdering.addNode "ID Desc", =>
-        @msa.ordering.orderSeqsAfterScheme "reverse-numeric"
+        @msa.ordering.setOrdering "reverse-numeric"
 
       menuOrdering.addNode "Label", =>
-        @msa.ordering.orderSeqsAfterScheme "alphabetic"
+        @msa.ordering.setOrdering "alphabetic"
 
       menuOrdering.addNode "Label Desc", =>
-        @msa.ordering.orderSeqsAfterScheme "reverse-alphabetic"
+        @msa.ordering.setOrdering "reverse-alphabetic"
 
       menuOrdering.buildDOM()

        else
          @msa.config.visibleElements.labels = true
          #$(this).children().first().text "Hide Labels"
        @msa.redrawEntire()

      menuFile.addNode "Hide Menu", =>
        @deleteMenu()

        else
          #$(this).children().first().text "Hide Marker"
          @msa.visibleElements.ruler = true
        @msa.redrawContainer()

      menuFile.addNode "Hide Labels", =>
        if @msa.config.visibleElements.labels is true
