@Test public void getPresentTermsWorksIfBothPresentAndAbsentTermsProvided() { assertEquals(new HashSet<>(this.presentTerms), this.termsGenePanel.getPresentTerms()); }
@Override public Set<VocabularyTerm> getPresentTerms() { return this.presentTerms; }
DefaultGenePanelImpl implements GenePanel { @Override public Set<VocabularyTerm> getPresentTerms() { return this.presentTerms; } }
DefaultGenePanelImpl implements GenePanel { @Override public Set<VocabularyTerm> getPresentTerms() { return this.presentTerms; } DefaultGenePanelImpl(@Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms, @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(@Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms, final boolean generateMatchCount,
        @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(
        @Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms,
        @Nonnull final Collection<VocabularyTerm> rejectedGenes,
        @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(
        @Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms,
        @Nonnull final Collection<VocabularyTerm> rejectedGenes,
        final boolean generateMatchCount,
        @Nonnull final VocabularyManager vocabularyManager); }
DefaultGenePanelImpl implements GenePanel { @Override public Set<VocabularyTerm> getPresentTerms() { return this.presentTerms; } DefaultGenePanelImpl(@Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms, @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(@Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms, final boolean generateMatchCount,
        @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(
        @Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms,
        @Nonnull final Collection<VocabularyTerm> rejectedGenes,
        @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(
        @Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms,
        @Nonnull final Collection<VocabularyTerm> rejectedGenes,
        final boolean generateMatchCount,
        @Nonnull final VocabularyManager vocabularyManager); @Override Set<VocabularyTerm> getPresentTerms(); @Override Set<VocabularyTerm> getAbsentTerms(); @Override List<TermsForGene> getTermsForGeneList(); @Override List<MatchCount> getMatchCounts(); @Override JSONObject toJSON(); @Override JSONObject toJSON(final int fromIndex, final int toIndex); @Override int size(); }
DefaultGenePanelImpl implements GenePanel { @Override public Set<VocabularyTerm> getPresentTerms() { return this.presentTerms; } DefaultGenePanelImpl(@Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms, @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(@Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms, final boolean generateMatchCount,
        @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(
        @Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms,
        @Nonnull final Collection<VocabularyTerm> rejectedGenes,
        @Nonnull final VocabularyManager vocabularyManager);   DefaultGenePanelImpl(
        @Nonnull final Collection<VocabularyTerm> presentTerms,
        @Nonnull final Collection<VocabularyTerm> absentTerms,
        @Nonnull final Collection<VocabularyTerm> rejectedGenes,
        final boolean generateMatchCount,
        @Nonnull final VocabularyManager vocabularyManager); @Override Set<VocabularyTerm> getPresentTerms(); @Override Set<VocabularyTerm> getAbsentTerms(); @Override List<TermsForGene> getTermsForGeneList(); @Override List<MatchCount> getMatchCounts(); @Override JSONObject toJSON(); @Override JSONObject toJSON(final int fromIndex, final int toIndex); @Override int size();  }