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dnanexus/dx-toolkit | src/python/dxpy/app_builder.py | get_enabled_regions | def get_enabled_regions(app_spec, from_command_line):
"""Returns a list of the regions in which the app should be enabled.
Also validates that app_spec['regionalOptions'], if supplied, is
well-formed.
:param app_spec: app specification
:type app_spec: dict
:param from_command_line: The regions specified on the command-line
via --region
:type from_command_line: list or None
"""
enabled_regions = dxpy.executable_builder.get_enabled_regions('app', app_spec, from_command_line, AppBuilderException)
if enabled_regions is not None and len(enabled_regions) == 0:
raise AssertionError("This app should be enabled in at least one region")
return enabled_regions | python | def get_enabled_regions(app_spec, from_command_line):
"""Returns a list of the regions in which the app should be enabled.
Also validates that app_spec['regionalOptions'], if supplied, is
well-formed.
:param app_spec: app specification
:type app_spec: dict
:param from_command_line: The regions specified on the command-line
via --region
:type from_command_line: list or None
"""
enabled_regions = dxpy.executable_builder.get_enabled_regions('app', app_spec, from_command_line, AppBuilderException)
if enabled_regions is not None and len(enabled_regions) == 0:
raise AssertionError("This app should be enabled in at least one region")
return enabled_regions | Returns a list of the regions in which the app should be enabled.
Also validates that app_spec['regionalOptions'], if supplied, is
well-formed.
:param app_spec: app specification
:type app_spec: dict
:param from_command_line: The regions specified on the command-line
via --region
:type from_command_line: list or None | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/app_builder.py#L918-L935 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | exit_with_error | def exit_with_error(msg):
'''
:param msg: string message to print before exiting
Print the error message, as well as a blurb on where to find the
job workspaces
'''
msg += '\n'
msg += 'Local job workspaces can be found in: ' + str(environ.get('DX_TEST_JOB_HOMEDIRS'))
sys.exit(msg) | python | def exit_with_error(msg):
'''
:param msg: string message to print before exiting
Print the error message, as well as a blurb on where to find the
job workspaces
'''
msg += '\n'
msg += 'Local job workspaces can be found in: ' + str(environ.get('DX_TEST_JOB_HOMEDIRS'))
sys.exit(msg) | :param msg: string message to print before exiting
Print the error message, as well as a blurb on where to find the
job workspaces | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L39-L48 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | has_local_job_refs | def has_local_job_refs(io_hash):
'''
:param io_hash: input/output hash
:type io_hash: dict
:returns: boolean indicating whether any job-based object references are found in *io_hash*
'''
q = []
for field in io_hash:
if is_job_ref(io_hash[field]):
if get_job_from_jbor(io_hash[field]).startswith('localjob'):
return True
elif isinstance(io_hash[field], list) or isinstance(io_hash[field], dict):
q.append(io_hash[field])
while len(q) > 0:
thing = q.pop()
if isinstance(thing, list):
for i in range(len(thing)):
if is_job_ref(thing[i]):
if get_job_from_jbor(thing[i]).startswith('localjob'):
return True
elif isinstance(thing[i], list) or isinstance(thing[i], dict):
q.append(thing[i])
else:
for field in thing:
if is_job_ref(thing[field]):
if get_job_from_jbor(thing[field]).startswith('localjob'):
return True
elif isinstance(thing[field], list) or isinstance(thing[field], dict):
q.append(thing[field])
return False | python | def has_local_job_refs(io_hash):
'''
:param io_hash: input/output hash
:type io_hash: dict
:returns: boolean indicating whether any job-based object references are found in *io_hash*
'''
q = []
for field in io_hash:
if is_job_ref(io_hash[field]):
if get_job_from_jbor(io_hash[field]).startswith('localjob'):
return True
elif isinstance(io_hash[field], list) or isinstance(io_hash[field], dict):
q.append(io_hash[field])
while len(q) > 0:
thing = q.pop()
if isinstance(thing, list):
for i in range(len(thing)):
if is_job_ref(thing[i]):
if get_job_from_jbor(thing[i]).startswith('localjob'):
return True
elif isinstance(thing[i], list) or isinstance(thing[i], dict):
q.append(thing[i])
else:
for field in thing:
if is_job_ref(thing[field]):
if get_job_from_jbor(thing[field]).startswith('localjob'):
return True
elif isinstance(thing[field], list) or isinstance(thing[field], dict):
q.append(thing[field])
return False | :param io_hash: input/output hash
:type io_hash: dict
:returns: boolean indicating whether any job-based object references are found in *io_hash* | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L50-L82 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | resolve_job_ref | def resolve_job_ref(jbor, job_outputs={}, should_resolve=True):
'''
:param jbor: a dict that is a valid job-based object reference
:type jbor: dict
:param job_outputs: a dict of finished local jobs to their output hashes
:type job_outputs: :class:`collections.OrderedDict`
:returns: the referenced value if present
:raises: :exc:`Exception` if the job-based object reference cannot be resolved
TODO: Support metadata references
'''
ref_job_id = get_job_from_jbor(jbor)
ref_job_field = get_field_from_jbor(jbor)
ref_job_index = get_index_from_jbor(jbor)
def resolve_from_hash(output_hash):
if ref_job_index is None:
return output_hash[ref_job_field]
else:
return output_hash[ref_job_field][ref_job_index]
if is_localjob_id(ref_job_id):
if job_outputs.get(ref_job_id) is None:
if should_resolve:
raise Exception('Job ' + ref_job_id + ' not found in local finished jobs')
else:
return jbor
if ref_job_field not in job_outputs[ref_job_id]:
raise Exception('Cannot resolve a JBOR with job ID ' + ref_job_id + ' because field "' + ref_job_field + '" was not found in its output')
return resolve_from_hash(job_outputs[ref_job_id])
else:
dxjob = dxpy.DXJob(ref_job_id)
try:
dxjob.wait_on_done()
except Exception as e:
raise Exception('Could not wait for ' + ref_job_id + ' to finish: ' + str(e))
job_desc = dxjob.describe()
if ref_job_field not in job_desc['output']:
raise Exception('Cannot resolve a JBOR with job ID ' + ref_job_id + ' because field "' + ref_job_field + '" was not found in its output')
return resolve_from_hash(job_desc['output']) | python | def resolve_job_ref(jbor, job_outputs={}, should_resolve=True):
'''
:param jbor: a dict that is a valid job-based object reference
:type jbor: dict
:param job_outputs: a dict of finished local jobs to their output hashes
:type job_outputs: :class:`collections.OrderedDict`
:returns: the referenced value if present
:raises: :exc:`Exception` if the job-based object reference cannot be resolved
TODO: Support metadata references
'''
ref_job_id = get_job_from_jbor(jbor)
ref_job_field = get_field_from_jbor(jbor)
ref_job_index = get_index_from_jbor(jbor)
def resolve_from_hash(output_hash):
if ref_job_index is None:
return output_hash[ref_job_field]
else:
return output_hash[ref_job_field][ref_job_index]
if is_localjob_id(ref_job_id):
if job_outputs.get(ref_job_id) is None:
if should_resolve:
raise Exception('Job ' + ref_job_id + ' not found in local finished jobs')
else:
return jbor
if ref_job_field not in job_outputs[ref_job_id]:
raise Exception('Cannot resolve a JBOR with job ID ' + ref_job_id + ' because field "' + ref_job_field + '" was not found in its output')
return resolve_from_hash(job_outputs[ref_job_id])
else:
dxjob = dxpy.DXJob(ref_job_id)
try:
dxjob.wait_on_done()
except Exception as e:
raise Exception('Could not wait for ' + ref_job_id + ' to finish: ' + str(e))
job_desc = dxjob.describe()
if ref_job_field not in job_desc['output']:
raise Exception('Cannot resolve a JBOR with job ID ' + ref_job_id + ' because field "' + ref_job_field + '" was not found in its output')
return resolve_from_hash(job_desc['output']) | :param jbor: a dict that is a valid job-based object reference
:type jbor: dict
:param job_outputs: a dict of finished local jobs to their output hashes
:type job_outputs: :class:`collections.OrderedDict`
:returns: the referenced value if present
:raises: :exc:`Exception` if the job-based object reference cannot be resolved
TODO: Support metadata references | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L84-L121 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | resolve_job_references | def resolve_job_references(io_hash, job_outputs, should_resolve=True):
'''
:param io_hash: an input or output hash in which to resolve any job-based object references possible
:type io_hash: dict
:param job_outputs: a mapping of finished local jobs to their output hashes
:type job_outputs: dict
:param should_resolve: whether it is an error if a job-based object reference in *io_hash* cannot be resolved yet
:type should_resolve: boolean
Modifies *io_hash* in-place.
'''
q = []
for field in io_hash:
if is_job_ref(io_hash[field]):
io_hash[field] = resolve_job_ref(io_hash[field], job_outputs, should_resolve)
elif isinstance(io_hash[field], list) or isinstance(io_hash[field], dict):
q.append(io_hash[field])
while len(q) > 0:
thing = q.pop()
if isinstance(thing, list):
for i in range(len(thing)):
if is_job_ref(thing[i]):
thing[i] = resolve_job_ref(thing[i], job_outputs, should_resolve)
elif isinstance(thing[i], list) or isinstance(thing[i], dict):
q.append(thing[i])
else:
for field in thing:
if is_job_ref(thing[field]):
thing[field] = resolve_job_ref(thing[field], job_outputs, should_resolve)
elif isinstance(thing[field], list) or isinstance(thing[field], dict):
q.append(thing[field]) | python | def resolve_job_references(io_hash, job_outputs, should_resolve=True):
'''
:param io_hash: an input or output hash in which to resolve any job-based object references possible
:type io_hash: dict
:param job_outputs: a mapping of finished local jobs to their output hashes
:type job_outputs: dict
:param should_resolve: whether it is an error if a job-based object reference in *io_hash* cannot be resolved yet
:type should_resolve: boolean
Modifies *io_hash* in-place.
'''
q = []
for field in io_hash:
if is_job_ref(io_hash[field]):
io_hash[field] = resolve_job_ref(io_hash[field], job_outputs, should_resolve)
elif isinstance(io_hash[field], list) or isinstance(io_hash[field], dict):
q.append(io_hash[field])
while len(q) > 0:
thing = q.pop()
if isinstance(thing, list):
for i in range(len(thing)):
if is_job_ref(thing[i]):
thing[i] = resolve_job_ref(thing[i], job_outputs, should_resolve)
elif isinstance(thing[i], list) or isinstance(thing[i], dict):
q.append(thing[i])
else:
for field in thing:
if is_job_ref(thing[field]):
thing[field] = resolve_job_ref(thing[field], job_outputs, should_resolve)
elif isinstance(thing[field], list) or isinstance(thing[field], dict):
q.append(thing[field]) | :param io_hash: an input or output hash in which to resolve any job-based object references possible
:type io_hash: dict
:param job_outputs: a mapping of finished local jobs to their output hashes
:type job_outputs: dict
:param should_resolve: whether it is an error if a job-based object reference in *io_hash* cannot be resolved yet
:type should_resolve: boolean
Modifies *io_hash* in-place. | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L123-L155 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | get_implicit_depends_on | def get_implicit_depends_on(input_hash, depends_on):
'''
Add DNAnexus links to non-closed data objects in input_hash to depends_on
'''
q = []
for field in input_hash:
possible_dep = get_nonclosed_data_obj_link(input_hash[field])
if possible_dep is not None:
depends_on.append(possible_dep)
elif isinstance(input_hash[field], list) or isinstance(input_hash[field], dict):
q.append(input_hash[field])
while len(q) > 0:
thing = q.pop()
if isinstance(thing, list):
for i in range(len(thing)):
possible_dep = get_nonclosed_data_obj_link(thing[i])
if possible_dep is not None:
depends_on.append(possible_dep)
elif isinstance(thing[i], list) or isinstance(thing[i], dict):
q.append(thing[i])
else:
for field in thing:
possible_dep = get_nonclosed_data_obj_link(thing[field])
if possible_dep is not None:
depends_on.append(possible_dep)
elif isinstance(thing[field], list) or isinstance(thing[field], dict):
q.append(thing[field]) | python | def get_implicit_depends_on(input_hash, depends_on):
'''
Add DNAnexus links to non-closed data objects in input_hash to depends_on
'''
q = []
for field in input_hash:
possible_dep = get_nonclosed_data_obj_link(input_hash[field])
if possible_dep is not None:
depends_on.append(possible_dep)
elif isinstance(input_hash[field], list) or isinstance(input_hash[field], dict):
q.append(input_hash[field])
while len(q) > 0:
thing = q.pop()
if isinstance(thing, list):
for i in range(len(thing)):
possible_dep = get_nonclosed_data_obj_link(thing[i])
if possible_dep is not None:
depends_on.append(possible_dep)
elif isinstance(thing[i], list) or isinstance(thing[i], dict):
q.append(thing[i])
else:
for field in thing:
possible_dep = get_nonclosed_data_obj_link(thing[field])
if possible_dep is not None:
depends_on.append(possible_dep)
elif isinstance(thing[field], list) or isinstance(thing[field], dict):
q.append(thing[field]) | Add DNAnexus links to non-closed data objects in input_hash to depends_on | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L171-L199 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | queue_entry_point | def queue_entry_point(function, input_hash, depends_on=[], name=None):
'''
:param function: function to run
:param input_hash: input to new job
:param depends_on: list of data object IDs and/or job IDs (local or remote) to wait for before the job can be run
:type depends_on: list of strings
:param name: job name (optional)
:returns: new local job ID
This function should only be called by a locally running job, so
all relevant DX_TEST_* environment variables should be set.
This function will set up the home directory for the job, add an
entry in job_outputs.json, and append the job information to the
job_queue.json file. (Both files found in
$DX_TEST_JOB_HOMEDIRS.)
'''
ensure_env_vars()
all_job_outputs_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json')
with open(all_job_outputs_path, 'r') as fd:
all_job_outputs = json.load(fd, object_pairs_hook=collections.OrderedDict)
job_id = 'localjob-' + str(len(all_job_outputs))
with open(all_job_outputs_path, write_mode) as fd:
all_job_outputs[job_id] = None
json.dump(all_job_outputs, fd, indent=4)
fd.write(eol)
job_homedir = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], job_id)
os.mkdir(job_homedir)
job_queue_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_queue.json')
with open(job_queue_path, 'r') as fd:
job_queue = json.load(fd)
job_entry = {"id": job_id,
"function": function,
"input_hash": input_hash,
"depends_on": depends_on}
if name is not None:
job_entry['name'] = name
job_queue.append(job_entry)
with open(job_queue_path, write_mode) as fd:
json.dump(job_queue, fd, indent=4)
fd.write(eol)
return job_id | python | def queue_entry_point(function, input_hash, depends_on=[], name=None):
'''
:param function: function to run
:param input_hash: input to new job
:param depends_on: list of data object IDs and/or job IDs (local or remote) to wait for before the job can be run
:type depends_on: list of strings
:param name: job name (optional)
:returns: new local job ID
This function should only be called by a locally running job, so
all relevant DX_TEST_* environment variables should be set.
This function will set up the home directory for the job, add an
entry in job_outputs.json, and append the job information to the
job_queue.json file. (Both files found in
$DX_TEST_JOB_HOMEDIRS.)
'''
ensure_env_vars()
all_job_outputs_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json')
with open(all_job_outputs_path, 'r') as fd:
all_job_outputs = json.load(fd, object_pairs_hook=collections.OrderedDict)
job_id = 'localjob-' + str(len(all_job_outputs))
with open(all_job_outputs_path, write_mode) as fd:
all_job_outputs[job_id] = None
json.dump(all_job_outputs, fd, indent=4)
fd.write(eol)
job_homedir = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], job_id)
os.mkdir(job_homedir)
job_queue_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_queue.json')
with open(job_queue_path, 'r') as fd:
job_queue = json.load(fd)
job_entry = {"id": job_id,
"function": function,
"input_hash": input_hash,
"depends_on": depends_on}
if name is not None:
job_entry['name'] = name
job_queue.append(job_entry)
with open(job_queue_path, write_mode) as fd:
json.dump(job_queue, fd, indent=4)
fd.write(eol)
return job_id | :param function: function to run
:param input_hash: input to new job
:param depends_on: list of data object IDs and/or job IDs (local or remote) to wait for before the job can be run
:type depends_on: list of strings
:param name: job name (optional)
:returns: new local job ID
This function should only be called by a locally running job, so
all relevant DX_TEST_* environment variables should be set.
This function will set up the home directory for the job, add an
entry in job_outputs.json, and append the job information to the
job_queue.json file. (Both files found in
$DX_TEST_JOB_HOMEDIRS.) | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L228-L275 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | run_one_entry_point | def run_one_entry_point(job_id, function, input_hash, run_spec, depends_on, name=None):
'''
:param job_id: job ID of the local job to run
:type job_id: string
:param function: function to run
:type function: string
:param input_hash: input for the job (may include job-based object references)
:type input_hash: dict
:param run_spec: run specification from the dxapp.json of the app
:type run_spec: dict
Runs the specified entry point and retrieves the job's output,
updating job_outputs.json (in $DX_TEST_JOB_HOMEDIRS) appropriately.
'''
print('======')
job_homedir = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], job_id)
job_env = environ.copy()
job_env['HOME'] = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], job_id)
all_job_outputs_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json')
with open(all_job_outputs_path, 'r') as fd:
all_job_outputs = json.load(fd, object_pairs_hook=collections.OrderedDict)
if isinstance(name, basestring):
name += ' (' + job_id + ':' + function + ')'
else:
name = job_id + ':' + function
job_name = BLUE() + BOLD() + name + ENDC()
print(job_name)
# Resolve local job-based object references
try:
resolve_job_references(input_hash, all_job_outputs)
except Exception as e:
exit_with_error(job_name + ' ' + JOB_STATES('failed') + ' when resolving input:\n' + fill(str(e)))
# Get list of non-closed data objects in the input that appear as
# DNAnexus links; append to depends_on
if depends_on is None:
depends_on = []
get_implicit_depends_on(input_hash, depends_on)
try:
wait_for_depends_on(depends_on, all_job_outputs)
except Exception as e:
exit_with_error(job_name + ' ' + JOB_STATES('failed') + ' when processing depends_on:\n' + fill(str(e)))
# Save job input to job_input.json
with open(os.path.join(job_homedir, 'job_input.json'), 'w') as fd:
json.dump(input_hash, fd, indent=4)
fd.write('\n')
print(job_output_to_str(input_hash, title=(BOLD() + 'Input: ' + ENDC()),
title_len=len("Input: ")).lstrip())
if run_spec['interpreter'] == 'bash':
# Save job input to env vars
env_path = os.path.join(job_homedir, 'environment')
with open(env_path, 'w') as fd:
job_input_file = os.path.join(job_homedir, 'job_input.json')
var_defs_hash = file_load_utils.gen_bash_vars(job_input_file, job_homedir=job_homedir)
for key, val in list(var_defs_hash.items()):
fd.write("{}={}\n".format(key, val))
print(BOLD() + 'Logs:' + ENDC())
start_time = datetime.datetime.now()
if run_spec['interpreter'] == 'bash':
script = '''
cd {homedir};
. {env_path};
. {code_path};
if [[ $(type -t {function}) == "function" ]];
then {function};
else echo "$0: Global scope execution complete. Not invoking entry point function {function} because it was not found" 1>&2;
fi'''.format(homedir=pipes.quote(job_homedir),
env_path=pipes.quote(os.path.join(job_env['HOME'], 'environment')),
code_path=pipes.quote(environ['DX_TEST_CODE_PATH']),
function=function)
invocation_args = ['bash', '-c', '-e'] + (['-x'] if environ.get('DX_TEST_X_FLAG') else []) + [script]
elif run_spec['interpreter'] == 'python2.7':
script = '''#!/usr/bin/env python
import os
os.chdir({homedir})
{code}
import dxpy, json
if dxpy.utils.exec_utils.RUN_COUNT == 0:
dxpy.run()
'''.format(homedir=repr(job_homedir),
code=run_spec['code'])
job_env['DX_TEST_FUNCTION'] = function
invocation_args = ['python', '-c', script]
if USING_PYTHON2:
invocation_args = [arg.encode(sys.stdout.encoding) for arg in invocation_args]
env = {k: v.encode(sys.stdout.encoding) for k, v in job_env.items()}
else:
env = job_env
fn_process = subprocess.Popen(invocation_args, env=env)
fn_process.communicate()
end_time = datetime.datetime.now()
if fn_process.returncode != 0:
exit_with_error(job_name + ' ' + JOB_STATES('failed') + ', exited with error code ' + str(fn_process.returncode) + ' after ' + str(end_time - start_time))
# Now updating job output aggregation file with job's output
job_output_path = os.path.join(job_env['HOME'], 'job_output.json')
if os.path.exists(job_output_path):
try:
with open(job_output_path, 'r') as fd:
job_output = json.load(fd, object_pairs_hook=collections.OrderedDict)
except Exception as e:
exit_with_error('Error: Could not load output of ' + job_name + ':\n' + fill(str(e.__class__) + ': ' + str(e)))
else:
job_output = {}
print(job_name + ' -> ' + GREEN() + 'finished running' + ENDC() + ' after ' + str(end_time - start_time))
print(job_output_to_str(job_output, title=(BOLD() + "Output: " + ENDC()),
title_len=len("Output: ")).lstrip())
with open(os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json'), 'r') as fd:
all_job_outputs = json.load(fd, object_pairs_hook=collections.OrderedDict)
all_job_outputs[job_id] = job_output
# Before dumping, see if any new jbors should be resolved now
for other_job_id in all_job_outputs:
if all_job_outputs[other_job_id] is None:
# Skip if job is not done yet (true for ancestor jobs)
continue
resolve_job_references(all_job_outputs[other_job_id], all_job_outputs, should_resolve=False)
with open(os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json'), write_mode) as fd:
json.dump(all_job_outputs, fd, indent=4)
fd.write(eol) | python | def run_one_entry_point(job_id, function, input_hash, run_spec, depends_on, name=None):
'''
:param job_id: job ID of the local job to run
:type job_id: string
:param function: function to run
:type function: string
:param input_hash: input for the job (may include job-based object references)
:type input_hash: dict
:param run_spec: run specification from the dxapp.json of the app
:type run_spec: dict
Runs the specified entry point and retrieves the job's output,
updating job_outputs.json (in $DX_TEST_JOB_HOMEDIRS) appropriately.
'''
print('======')
job_homedir = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], job_id)
job_env = environ.copy()
job_env['HOME'] = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], job_id)
all_job_outputs_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json')
with open(all_job_outputs_path, 'r') as fd:
all_job_outputs = json.load(fd, object_pairs_hook=collections.OrderedDict)
if isinstance(name, basestring):
name += ' (' + job_id + ':' + function + ')'
else:
name = job_id + ':' + function
job_name = BLUE() + BOLD() + name + ENDC()
print(job_name)
# Resolve local job-based object references
try:
resolve_job_references(input_hash, all_job_outputs)
except Exception as e:
exit_with_error(job_name + ' ' + JOB_STATES('failed') + ' when resolving input:\n' + fill(str(e)))
# Get list of non-closed data objects in the input that appear as
# DNAnexus links; append to depends_on
if depends_on is None:
depends_on = []
get_implicit_depends_on(input_hash, depends_on)
try:
wait_for_depends_on(depends_on, all_job_outputs)
except Exception as e:
exit_with_error(job_name + ' ' + JOB_STATES('failed') + ' when processing depends_on:\n' + fill(str(e)))
# Save job input to job_input.json
with open(os.path.join(job_homedir, 'job_input.json'), 'w') as fd:
json.dump(input_hash, fd, indent=4)
fd.write('\n')
print(job_output_to_str(input_hash, title=(BOLD() + 'Input: ' + ENDC()),
title_len=len("Input: ")).lstrip())
if run_spec['interpreter'] == 'bash':
# Save job input to env vars
env_path = os.path.join(job_homedir, 'environment')
with open(env_path, 'w') as fd:
job_input_file = os.path.join(job_homedir, 'job_input.json')
var_defs_hash = file_load_utils.gen_bash_vars(job_input_file, job_homedir=job_homedir)
for key, val in list(var_defs_hash.items()):
fd.write("{}={}\n".format(key, val))
print(BOLD() + 'Logs:' + ENDC())
start_time = datetime.datetime.now()
if run_spec['interpreter'] == 'bash':
script = '''
cd {homedir};
. {env_path};
. {code_path};
if [[ $(type -t {function}) == "function" ]];
then {function};
else echo "$0: Global scope execution complete. Not invoking entry point function {function} because it was not found" 1>&2;
fi'''.format(homedir=pipes.quote(job_homedir),
env_path=pipes.quote(os.path.join(job_env['HOME'], 'environment')),
code_path=pipes.quote(environ['DX_TEST_CODE_PATH']),
function=function)
invocation_args = ['bash', '-c', '-e'] + (['-x'] if environ.get('DX_TEST_X_FLAG') else []) + [script]
elif run_spec['interpreter'] == 'python2.7':
script = '''#!/usr/bin/env python
import os
os.chdir({homedir})
{code}
import dxpy, json
if dxpy.utils.exec_utils.RUN_COUNT == 0:
dxpy.run()
'''.format(homedir=repr(job_homedir),
code=run_spec['code'])
job_env['DX_TEST_FUNCTION'] = function
invocation_args = ['python', '-c', script]
if USING_PYTHON2:
invocation_args = [arg.encode(sys.stdout.encoding) for arg in invocation_args]
env = {k: v.encode(sys.stdout.encoding) for k, v in job_env.items()}
else:
env = job_env
fn_process = subprocess.Popen(invocation_args, env=env)
fn_process.communicate()
end_time = datetime.datetime.now()
if fn_process.returncode != 0:
exit_with_error(job_name + ' ' + JOB_STATES('failed') + ', exited with error code ' + str(fn_process.returncode) + ' after ' + str(end_time - start_time))
# Now updating job output aggregation file with job's output
job_output_path = os.path.join(job_env['HOME'], 'job_output.json')
if os.path.exists(job_output_path):
try:
with open(job_output_path, 'r') as fd:
job_output = json.load(fd, object_pairs_hook=collections.OrderedDict)
except Exception as e:
exit_with_error('Error: Could not load output of ' + job_name + ':\n' + fill(str(e.__class__) + ': ' + str(e)))
else:
job_output = {}
print(job_name + ' -> ' + GREEN() + 'finished running' + ENDC() + ' after ' + str(end_time - start_time))
print(job_output_to_str(job_output, title=(BOLD() + "Output: " + ENDC()),
title_len=len("Output: ")).lstrip())
with open(os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json'), 'r') as fd:
all_job_outputs = json.load(fd, object_pairs_hook=collections.OrderedDict)
all_job_outputs[job_id] = job_output
# Before dumping, see if any new jbors should be resolved now
for other_job_id in all_job_outputs:
if all_job_outputs[other_job_id] is None:
# Skip if job is not done yet (true for ancestor jobs)
continue
resolve_job_references(all_job_outputs[other_job_id], all_job_outputs, should_resolve=False)
with open(os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json'), write_mode) as fd:
json.dump(all_job_outputs, fd, indent=4)
fd.write(eol) | :param job_id: job ID of the local job to run
:type job_id: string
:param function: function to run
:type function: string
:param input_hash: input for the job (may include job-based object references)
:type input_hash: dict
:param run_spec: run specification from the dxapp.json of the app
:type run_spec: dict
Runs the specified entry point and retrieves the job's output,
updating job_outputs.json (in $DX_TEST_JOB_HOMEDIRS) appropriately. | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L277-L417 |
dnanexus/dx-toolkit | src/python/dxpy/utils/local_exec_utils.py | run_entry_points | def run_entry_points(run_spec):
'''
:param run_spec: run specification from the dxapp.json of the app
:type run_spec: dict
Runs all job entry points found in
$DX_TEST_JOB_HOMEDIRS/job_queue.json in a first-in, first-out
manner until it is an empty array (or an error occurs).
'''
job_queue_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_queue.json')
all_job_outputs_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json')
while True:
with open(job_queue_path, 'r') as fd:
job_queue = json.load(fd)
if len(job_queue) == 0:
return
with open(all_job_outputs_path, 'r') as fd:
all_job_outputs = json.load(fd)
entry_point_to_run = None
for i, entry_point in enumerate(job_queue):
runnable = True
# See if its inputs are ready
while has_local_job_refs(entry_point['input_hash']):
try:
resolve_job_references(entry_point['input_hash'], all_job_outputs)
except:
runnable = False
break
if runnable:
entry_point_to_run = job_queue.pop(i)
break
if entry_point_to_run is None:
# Just run the first entry point and let the runner throw
# the appropriate error
entry_point_to_run = job_queue.pop(0)
with open(job_queue_path, write_mode) as fd:
# Update job queue with updated inputs and after having
# popped the entry point to be run
json.dump(job_queue, fd)
fd.write(eol)
run_one_entry_point(job_id=entry_point_to_run['id'],
function=entry_point_to_run['function'],
input_hash=entry_point_to_run['input_hash'],
run_spec=run_spec,
depends_on=entry_point_to_run.get('depends_on', []),
name=entry_point_to_run.get('name')) | python | def run_entry_points(run_spec):
'''
:param run_spec: run specification from the dxapp.json of the app
:type run_spec: dict
Runs all job entry points found in
$DX_TEST_JOB_HOMEDIRS/job_queue.json in a first-in, first-out
manner until it is an empty array (or an error occurs).
'''
job_queue_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_queue.json')
all_job_outputs_path = os.path.join(environ['DX_TEST_JOB_HOMEDIRS'], 'job_outputs.json')
while True:
with open(job_queue_path, 'r') as fd:
job_queue = json.load(fd)
if len(job_queue) == 0:
return
with open(all_job_outputs_path, 'r') as fd:
all_job_outputs = json.load(fd)
entry_point_to_run = None
for i, entry_point in enumerate(job_queue):
runnable = True
# See if its inputs are ready
while has_local_job_refs(entry_point['input_hash']):
try:
resolve_job_references(entry_point['input_hash'], all_job_outputs)
except:
runnable = False
break
if runnable:
entry_point_to_run = job_queue.pop(i)
break
if entry_point_to_run is None:
# Just run the first entry point and let the runner throw
# the appropriate error
entry_point_to_run = job_queue.pop(0)
with open(job_queue_path, write_mode) as fd:
# Update job queue with updated inputs and after having
# popped the entry point to be run
json.dump(job_queue, fd)
fd.write(eol)
run_one_entry_point(job_id=entry_point_to_run['id'],
function=entry_point_to_run['function'],
input_hash=entry_point_to_run['input_hash'],
run_spec=run_spec,
depends_on=entry_point_to_run.get('depends_on', []),
name=entry_point_to_run.get('name')) | :param run_spec: run specification from the dxapp.json of the app
:type run_spec: dict
Runs all job entry points found in
$DX_TEST_JOB_HOMEDIRS/job_queue.json in a first-in, first-out
manner until it is an empty array (or an error occurs). | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/utils/local_exec_utils.py#L419-L470 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | analysis_add_tags | def analysis_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def analysis_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /analysis-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FaddTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L13-L19 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | analysis_describe | def analysis_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def analysis_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /analysis-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L21-L27 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | analysis_remove_tags | def analysis_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def analysis_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /analysis-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FremoveTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L29-L35 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | analysis_set_properties | def analysis_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def analysis_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /analysis-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2FsetProperties | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L37-L43 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | analysis_terminate | def analysis_terminate(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/terminate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2Fterminate
"""
return DXHTTPRequest('/%s/terminate' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def analysis_terminate(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /analysis-xxxx/terminate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2Fterminate
"""
return DXHTTPRequest('/%s/terminate' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /analysis-xxxx/terminate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#API-method%3A-%2Fanalysis-xxxx%2Fterminate | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L45-L51 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | app_add_developers | def app_add_developers(app_name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /app-xxxx/addDevelopers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Apps#API-method:-/app-xxxx%5B/yyyy%5D/addDevelopers
"""
fully_qualified_version = app_name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/addDevelopers' % fully_qualified_version, input_params, always_retry=always_retry, **kwargs) | python | def app_add_developers(app_name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /app-xxxx/addDevelopers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Apps#API-method:-/app-xxxx%5B/yyyy%5D/addDevelopers
"""
fully_qualified_version = app_name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/addDevelopers' % fully_qualified_version, input_params, always_retry=always_retry, **kwargs) | Invokes the /app-xxxx/addDevelopers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Apps#API-method:-/app-xxxx%5B/yyyy%5D/addDevelopers | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L71-L78 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | app_run | def app_run(app_name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /app-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Apps#API-method:-/app-xxxx%5B/yyyy%5D/run
"""
input_params_cp = Nonce.update_nonce(input_params)
fully_qualified_version = app_name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/run' % fully_qualified_version, input_params_cp, always_retry=always_retry, **kwargs) | python | def app_run(app_name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /app-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Apps#API-method:-/app-xxxx%5B/yyyy%5D/run
"""
input_params_cp = Nonce.update_nonce(input_params)
fully_qualified_version = app_name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/run' % fully_qualified_version, input_params_cp, always_retry=always_retry, **kwargs) | Invokes the /app-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Apps#API-method:-/app-xxxx%5B/yyyy%5D/run | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L197-L205 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_add_tags | def applet_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L243-L249 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_describe | def applet_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L251-L257 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_get | def applet_get(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/get API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Fget
"""
return DXHTTPRequest('/%s/get' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_get(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/get API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Fget
"""
return DXHTTPRequest('/%s/get' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/get API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Fget | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L259-L265 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_get_details | def applet_get_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails
"""
return DXHTTPRequest('/%s/getDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_get_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails
"""
return DXHTTPRequest('/%s/getDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L267-L273 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_list_projects | def applet_list_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects
"""
return DXHTTPRequest('/%s/listProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_list_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects
"""
return DXHTTPRequest('/%s/listProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L275-L281 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_remove_tags | def applet_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L283-L289 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_rename | def applet_rename(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename
"""
return DXHTTPRequest('/%s/rename' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_rename(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename
"""
return DXHTTPRequest('/%s/rename' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L291-L297 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_validate_batch | def applet_validate_batch(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/validateBatch API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2FvalidateBatch
"""
return DXHTTPRequest('/%s/validateBatch' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_validate_batch(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/validateBatch API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2FvalidateBatch
"""
return DXHTTPRequest('/%s/validateBatch' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/validateBatch API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2FvalidateBatch | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L299-L305 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_run | def applet_run(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Frun
"""
input_params_cp = Nonce.update_nonce(input_params)
return DXHTTPRequest('/%s/run' % object_id, input_params_cp, always_retry=always_retry, **kwargs) | python | def applet_run(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Frun
"""
input_params_cp = Nonce.update_nonce(input_params)
return DXHTTPRequest('/%s/run' % object_id, input_params_cp, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fapplet-xxxx%2Frun | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L307-L314 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | applet_set_properties | def applet_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def applet_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /applet-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /applet-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L316-L322 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_clone | def container_clone(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/clone API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2Fclone
"""
return DXHTTPRequest('/%s/clone' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_clone(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/clone API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2Fclone
"""
return DXHTTPRequest('/%s/clone' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/clone API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2Fclone | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L333-L339 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_describe | def container_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Containers-for-Execution#API-method%3A-%2Fcontainer-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Containers-for-Execution#API-method%3A-%2Fcontainer-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Containers-for-Execution#API-method%3A-%2Fcontainer-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L341-L347 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_destroy | def container_destroy(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/destroy API method.
"""
return DXHTTPRequest('/%s/destroy' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_destroy(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/destroy API method.
"""
return DXHTTPRequest('/%s/destroy' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/destroy API method. | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L349-L353 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_list_folder | def container_list_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FlistFolder
"""
return DXHTTPRequest('/%s/listFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_list_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FlistFolder
"""
return DXHTTPRequest('/%s/listFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FlistFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L355-L361 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_move | def container_move(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/move API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2Fmove
"""
return DXHTTPRequest('/%s/move' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_move(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/move API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2Fmove
"""
return DXHTTPRequest('/%s/move' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/move API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2Fmove | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L363-L369 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_new_folder | def container_new_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/newFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FnewFolder
"""
return DXHTTPRequest('/%s/newFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_new_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /container-xxxx/newFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FnewFolder
"""
return DXHTTPRequest('/%s/newFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/newFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FnewFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L371-L377 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_remove_folder | def container_remove_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/removeFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveFolder
"""
return DXHTTPRequest('/%s/removeFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_remove_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/removeFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveFolder
"""
return DXHTTPRequest('/%s/removeFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/removeFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L379-L385 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_remove_objects | def container_remove_objects(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/removeObjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveObjects
"""
return DXHTTPRequest('/%s/removeObjects' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_remove_objects(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/removeObjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveObjects
"""
return DXHTTPRequest('/%s/removeObjects' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/removeObjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveObjects | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L387-L393 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | container_rename_folder | def container_rename_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/renameFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FrenameFolder
"""
return DXHTTPRequest('/%s/renameFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def container_rename_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /container-xxxx/renameFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FrenameFolder
"""
return DXHTTPRequest('/%s/renameFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /container-xxxx/renameFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FrenameFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L395-L401 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_add_tags | def database_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L403-L409 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_add_types | def database_add_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/addTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FaddTypes
"""
return DXHTTPRequest('/%s/addTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_add_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/addTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FaddTypes
"""
return DXHTTPRequest('/%s/addTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/addTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FaddTypes | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L411-L417 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_close | def database_close(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/close API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Data-Object-Lifecycle#API-method%3A-%2Fclass-xxxx%2Fclose
"""
return DXHTTPRequest('/%s/close' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_close(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/close API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Data-Object-Lifecycle#API-method%3A-%2Fclass-xxxx%2Fclose
"""
return DXHTTPRequest('/%s/close' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/close API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Data-Object-Lifecycle#API-method%3A-%2Fclass-xxxx%2Fclose | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L419-L425 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_describe | def database_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L427-L433 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_get_details | def database_get_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails
"""
return DXHTTPRequest('/%s/getDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_get_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails
"""
return DXHTTPRequest('/%s/getDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L435-L441 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_list_projects | def database_list_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects
"""
return DXHTTPRequest('/%s/listProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_list_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects
"""
return DXHTTPRequest('/%s/listProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L443-L449 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_relocate | def database_relocate(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /database-xxxx/relocate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2Frelocate
"""
return DXHTTPRequest('/%s/relocate' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_relocate(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /database-xxxx/relocate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2Frelocate
"""
return DXHTTPRequest('/%s/relocate' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/relocate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2Frelocate | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L451-L457 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_remove_tags | def database_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L459-L465 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_remove_types | def database_remove_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/removeTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FremoveTypes
"""
return DXHTTPRequest('/%s/removeTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_remove_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/removeTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FremoveTypes
"""
return DXHTTPRequest('/%s/removeTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/removeTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FremoveTypes | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L467-L473 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_rename | def database_rename(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename
"""
return DXHTTPRequest('/%s/rename' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_rename(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename
"""
return DXHTTPRequest('/%s/rename' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L475-L481 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_set_details | def database_set_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/setDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FsetDetails
"""
return DXHTTPRequest('/%s/setDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_set_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/setDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FsetDetails
"""
return DXHTTPRequest('/%s/setDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/setDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FsetDetails | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L483-L489 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_set_properties | def database_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L491-L497 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_set_visibility | def database_set_visibility(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/setVisibility API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Visibility#API-method%3A-%2Fclass-xxxx%2FsetVisibility
"""
return DXHTTPRequest('/%s/setVisibility' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_set_visibility(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/setVisibility API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Visibility#API-method%3A-%2Fclass-xxxx%2FsetVisibility
"""
return DXHTTPRequest('/%s/setVisibility' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/setVisibility API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Visibility#API-method%3A-%2Fclass-xxxx%2FsetVisibility | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L499-L505 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | database_list_folder | def database_list_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2FlistFolder
"""
return DXHTTPRequest('/%s/listFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def database_list_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /database-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2FlistFolder
"""
return DXHTTPRequest('/%s/listFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /database-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Databases#API-method%3A-%2Fdatabase-xxxx%2FlistFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L507-L513 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_add_tags | def file_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FaddTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L515-L521 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_add_types | def file_add_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/addTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FaddTypes
"""
return DXHTTPRequest('/%s/addTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_add_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/addTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FaddTypes
"""
return DXHTTPRequest('/%s/addTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/addTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FaddTypes | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L523-L529 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_close | def file_close(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/close API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fclose
"""
return DXHTTPRequest('/%s/close' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_close(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/close API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fclose
"""
return DXHTTPRequest('/%s/close' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/close API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fclose | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L531-L537 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_describe | def file_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L539-L545 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_download | def file_download(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/download API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fdownload
"""
return DXHTTPRequest('/%s/download' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_download(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/download API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fdownload
"""
return DXHTTPRequest('/%s/download' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/download API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fdownload | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L547-L553 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_get_details | def file_get_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails
"""
return DXHTTPRequest('/%s/getDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_get_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails
"""
return DXHTTPRequest('/%s/getDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/getDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FgetDetails | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L555-L561 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_list_projects | def file_list_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects
"""
return DXHTTPRequest('/%s/listProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_list_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects
"""
return DXHTTPRequest('/%s/listProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/listProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2FlistProjects | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L563-L569 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_remove_tags | def file_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Tags#API-method%3A-%2Fclass-xxxx%2FremoveTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L571-L577 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_remove_types | def file_remove_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/removeTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FremoveTypes
"""
return DXHTTPRequest('/%s/removeTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_remove_types(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/removeTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FremoveTypes
"""
return DXHTTPRequest('/%s/removeTypes' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/removeTypes API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Types#API-method%3A-%2Fclass-xxxx%2FremoveTypes | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L579-L585 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_rename | def file_rename(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename
"""
return DXHTTPRequest('/%s/rename' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_rename(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename
"""
return DXHTTPRequest('/%s/rename' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/rename API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Name#API-method%3A-%2Fclass-xxxx%2Frename | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L587-L593 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_set_details | def file_set_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/setDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FsetDetails
"""
return DXHTTPRequest('/%s/setDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_set_details(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/setDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FsetDetails
"""
return DXHTTPRequest('/%s/setDetails' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/setDetails API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Details-and-Links#API-method%3A-%2Fclass-xxxx%2FsetDetails | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L595-L601 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_set_properties | def file_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Properties#API-method%3A-%2Fclass-xxxx%2FsetProperties | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L603-L609 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_set_visibility | def file_set_visibility(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/setVisibility API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Visibility#API-method%3A-%2Fclass-xxxx%2FsetVisibility
"""
return DXHTTPRequest('/%s/setVisibility' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_set_visibility(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/setVisibility API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Visibility#API-method%3A-%2Fclass-xxxx%2FsetVisibility
"""
return DXHTTPRequest('/%s/setVisibility' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/setVisibility API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Visibility#API-method%3A-%2Fclass-xxxx%2FsetVisibility | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L611-L617 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_upload | def file_upload(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/upload API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fupload
"""
return DXHTTPRequest('/%s/upload' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def file_upload(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file-xxxx/upload API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fupload
"""
return DXHTTPRequest('/%s/upload' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /file-xxxx/upload API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile-xxxx%2Fupload | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L619-L625 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | file_new | def file_new(input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file/new API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile%2Fnew
"""
input_params_cp = Nonce.update_nonce(input_params)
return DXHTTPRequest('/file/new', input_params_cp, always_retry=always_retry, **kwargs) | python | def file_new(input_params={}, always_retry=True, **kwargs):
"""
Invokes the /file/new API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile%2Fnew
"""
input_params_cp = Nonce.update_nonce(input_params)
return DXHTTPRequest('/file/new', input_params_cp, always_retry=always_retry, **kwargs) | Invokes the /file/new API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Files#API-method%3A-%2Ffile%2Fnew | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L627-L634 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | global_workflow_add_authorized_users | def global_workflow_add_authorized_users(name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /globalworkflow-xxxx/addAuthorizedUsers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyyy%5D/addAuthorizedUsers
"""
fully_qualified_version = name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/addAuthorizedUsers' % fully_qualified_version, input_params, always_retry=always_retry, **kwargs) | python | def global_workflow_add_authorized_users(name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /globalworkflow-xxxx/addAuthorizedUsers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyyy%5D/addAuthorizedUsers
"""
fully_qualified_version = name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/addAuthorizedUsers' % fully_qualified_version, input_params, always_retry=always_retry, **kwargs) | Invokes the /globalworkflow-xxxx/addAuthorizedUsers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyyy%5D/addAuthorizedUsers | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L636-L643 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | global_workflow_run | def global_workflow_run(name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /globalworkflow-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyyy%5D/run
"""
input_params_cp = Nonce.update_nonce(input_params)
fully_qualified_version = name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/run' % fully_qualified_version, input_params_cp, always_retry=always_retry, **kwargs) | python | def global_workflow_run(name_or_id, alias=None, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /globalworkflow-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyyy%5D/run
"""
input_params_cp = Nonce.update_nonce(input_params)
fully_qualified_version = name_or_id + (('/' + alias) if alias else '')
return DXHTTPRequest('/%s/run' % fully_qualified_version, input_params_cp, always_retry=always_retry, **kwargs) | Invokes the /globalworkflow-xxxx/run API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyyy%5D/run | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L762-L770 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | job_add_tags | def job_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def job_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /job-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FaddTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L790-L796 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | job_describe | def job_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def job_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /job-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L798-L804 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | job_get_log | def job_get_log(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /job-xxxx/getLog API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FgetLog
"""
return DXHTTPRequest('/%s/getLog' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def job_get_log(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /job-xxxx/getLog API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FgetLog
"""
return DXHTTPRequest('/%s/getLog' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /job-xxxx/getLog API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FgetLog | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L806-L812 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | job_remove_tags | def job_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def job_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /job-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FremoveTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L814-L820 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | job_set_properties | def job_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def job_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /job-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2FsetProperties | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L822-L828 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | job_terminate | def job_terminate(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/terminate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2Fterminate
"""
return DXHTTPRequest('/%s/terminate' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def job_terminate(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /job-xxxx/terminate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2Fterminate
"""
return DXHTTPRequest('/%s/terminate' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /job-xxxx/terminate API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Applets-and-Entry-Points#API-method%3A-%2Fjob-xxxx%2Fterminate | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L830-L836 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | notifications_get | def notifications_get(input_params={}, always_retry=True, **kwargs):
"""
Invokes the /notifications/get API method.
"""
return DXHTTPRequest('/notifications/get', input_params, always_retry=always_retry, **kwargs) | python | def notifications_get(input_params={}, always_retry=True, **kwargs):
"""
Invokes the /notifications/get API method.
"""
return DXHTTPRequest('/notifications/get', input_params, always_retry=always_retry, **kwargs) | Invokes the /notifications/get API method. | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L847-L851 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | notifications_mark_read | def notifications_mark_read(input_params={}, always_retry=True, **kwargs):
"""
Invokes the /notifications/markRead API method.
"""
return DXHTTPRequest('/notifications/markRead', input_params, always_retry=always_retry, **kwargs) | python | def notifications_mark_read(input_params={}, always_retry=True, **kwargs):
"""
Invokes the /notifications/markRead API method.
"""
return DXHTTPRequest('/notifications/markRead', input_params, always_retry=always_retry, **kwargs) | Invokes the /notifications/markRead API method. | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L853-L857 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_describe | def org_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L859-L865 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_find_members | def org_find_members(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/findMembers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindMembers
"""
return DXHTTPRequest('/%s/findMembers' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_find_members(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/findMembers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindMembers
"""
return DXHTTPRequest('/%s/findMembers' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/findMembers API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindMembers | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L867-L873 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_find_projects | def org_find_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/findProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindProjects
"""
return DXHTTPRequest('/%s/findProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_find_projects(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/findProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindProjects
"""
return DXHTTPRequest('/%s/findProjects' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/findProjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindProjects | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L875-L881 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_find_apps | def org_find_apps(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/findApps API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindApps
"""
return DXHTTPRequest('/%s/findApps' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_find_apps(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/findApps API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindApps
"""
return DXHTTPRequest('/%s/findApps' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/findApps API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FfindApps | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L883-L889 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_invite | def org_invite(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/invite API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Finvite
"""
return DXHTTPRequest('/%s/invite' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_invite(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/invite API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Finvite
"""
return DXHTTPRequest('/%s/invite' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/invite API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Finvite | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L891-L897 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_remove_member | def org_remove_member(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/removeMember API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FremoveMember
"""
return DXHTTPRequest('/%s/removeMember' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_remove_member(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/removeMember API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FremoveMember
"""
return DXHTTPRequest('/%s/removeMember' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/removeMember API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FremoveMember | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L899-L905 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_set_member_access | def org_set_member_access(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/setMemberAccess API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FsetMemberAccess
"""
return DXHTTPRequest('/%s/setMemberAccess' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_set_member_access(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/setMemberAccess API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FsetMemberAccess
"""
return DXHTTPRequest('/%s/setMemberAccess' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/setMemberAccess API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2FsetMemberAccess | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L907-L913 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | org_update | def org_update(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/update API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Fupdate
"""
return DXHTTPRequest('/%s/update' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def org_update(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /org-xxxx/update API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Fupdate
"""
return DXHTTPRequest('/%s/update' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /org-xxxx/update API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Organizations#API-method%3A-%2Forg-xxxx%2Fupdate | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L915-L921 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_add_tags | def project_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_add_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FaddTags
"""
return DXHTTPRequest('/%s/addTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/addTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FaddTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L932-L938 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_clone | def project_clone(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/clone API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2Fclone
"""
return DXHTTPRequest('/%s/clone' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_clone(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/clone API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2Fclone
"""
return DXHTTPRequest('/%s/clone' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/clone API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Cloning#API-method%3A-%2Fclass-xxxx%2Fclone | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L940-L946 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_decrease_permissions | def project_decrease_permissions(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/decreasePermissions API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2FdecreasePermissions
"""
return DXHTTPRequest('/%s/decreasePermissions' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_decrease_permissions(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/decreasePermissions API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2FdecreasePermissions
"""
return DXHTTPRequest('/%s/decreasePermissions' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/decreasePermissions API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2FdecreasePermissions | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L948-L954 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_describe | def project_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_describe(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fdescribe
"""
return DXHTTPRequest('/%s/describe' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/describe API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fdescribe | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L956-L962 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_destroy | def project_destroy(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/destroy API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fdestroy
"""
return DXHTTPRequest('/%s/destroy' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_destroy(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/destroy API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fdestroy
"""
return DXHTTPRequest('/%s/destroy' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/destroy API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fdestroy | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L964-L970 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_invite | def project_invite(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/invite API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Finvite
"""
return DXHTTPRequest('/%s/invite' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_invite(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/invite API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Finvite
"""
return DXHTTPRequest('/%s/invite' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/invite API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Finvite | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L972-L978 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_leave | def project_leave(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/leave API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Fleave
"""
return DXHTTPRequest('/%s/leave' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_leave(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/leave API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Fleave
"""
return DXHTTPRequest('/%s/leave' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/leave API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Fleave | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L980-L986 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_list_folder | def project_list_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FlistFolder
"""
return DXHTTPRequest('/%s/listFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_list_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FlistFolder
"""
return DXHTTPRequest('/%s/listFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/listFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FlistFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L988-L994 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_move | def project_move(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/move API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2Fmove
"""
return DXHTTPRequest('/%s/move' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_move(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/move API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2Fmove
"""
return DXHTTPRequest('/%s/move' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/move API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2Fmove | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L996-L1002 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_new_folder | def project_new_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/newFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FnewFolder
"""
return DXHTTPRequest('/%s/newFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_new_folder(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/newFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FnewFolder
"""
return DXHTTPRequest('/%s/newFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/newFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FnewFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1004-L1010 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_remove_folder | def project_remove_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/removeFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveFolder
"""
return DXHTTPRequest('/%s/removeFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_remove_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/removeFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveFolder
"""
return DXHTTPRequest('/%s/removeFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/removeFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1012-L1018 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_remove_objects | def project_remove_objects(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/removeObjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveObjects
"""
return DXHTTPRequest('/%s/removeObjects' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_remove_objects(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/removeObjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveObjects
"""
return DXHTTPRequest('/%s/removeObjects' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/removeObjects API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FremoveObjects | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1020-L1026 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_remove_tags | def project_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_remove_tags(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FremoveTags
"""
return DXHTTPRequest('/%s/removeTags' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/removeTags API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FremoveTags | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1028-L1034 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_rename_folder | def project_rename_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/renameFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FrenameFolder
"""
return DXHTTPRequest('/%s/renameFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_rename_folder(object_id, input_params={}, always_retry=False, **kwargs):
"""
Invokes the /project-xxxx/renameFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FrenameFolder
"""
return DXHTTPRequest('/%s/renameFolder' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/renameFolder API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Folders-and-Deletion#API-method%3A-%2Fclass-xxxx%2FrenameFolder | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1036-L1042 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_set_properties | def project_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_set_properties(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FsetProperties
"""
return DXHTTPRequest('/%s/setProperties' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/setProperties API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FsetProperties | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1044-L1050 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_transfer | def project_transfer(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/transfer API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Ftransfer
"""
return DXHTTPRequest('/%s/transfer' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_transfer(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/transfer API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Ftransfer
"""
return DXHTTPRequest('/%s/transfer' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/transfer API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Project-Permissions-and-Sharing#API-method%3A-%2Fproject-xxxx%2Ftransfer | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1052-L1058 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_update | def project_update(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/update API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fupdate
"""
return DXHTTPRequest('/%s/update' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_update(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/update API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fupdate
"""
return DXHTTPRequest('/%s/update' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/update API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2Fupdate | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1060-L1066 |
dnanexus/dx-toolkit | src/python/dxpy/api.py | project_update_sponsorship | def project_update_sponsorship(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/updateSponsorship API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FupdateSponsorship
"""
return DXHTTPRequest('/%s/updateSponsorship' % object_id, input_params, always_retry=always_retry, **kwargs) | python | def project_update_sponsorship(object_id, input_params={}, always_retry=True, **kwargs):
"""
Invokes the /project-xxxx/updateSponsorship API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FupdateSponsorship
"""
return DXHTTPRequest('/%s/updateSponsorship' % object_id, input_params, always_retry=always_retry, **kwargs) | Invokes the /project-xxxx/updateSponsorship API method.
For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Projects#API-method%3A-%2Fproject-xxxx%2FupdateSponsorship | https://github.com/dnanexus/dx-toolkit/blob/74befb53ad90fcf902d8983ae6d74580f402d619/src/python/dxpy/api.py#L1068-L1074 |
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