INIFILE	settings/include/settings.ini

PRESTATS	yes
MAPPING	yes
POSTSTATS	yes
DAMAGE_ESTIMATE	no
INDEL_REALIGNMENT	no

GERMLINE_CALLING	no

STRELKA	no

AMBER	no
AMBER_BAF_SEGMENTATION	no
COBALT	no
PURPLE	no

STRUCTURAL_VARIANT_CALLING	yes
MANTA	no
GRIDSS	yes

HEALTHCHECK	no

INIFILE	settings/include/settings.ini

PRESTATS	no
MAPPING	no
POSTSTATS	yes
DAMAGE_ESTIMATE	no
INDEL_REALIGNMENT	no

GERMLINE_CALLING	no

STRELKA	no

AMBER	no
AMBER_BAF_SEGMENTATION	no
COBALT	no
PURPLE	no

STRUCTURAL_VARIANT_CALLING	yes
MANTA	no
GRIDSS	yes

HEALTHCHECK	no

Disable mapping and prestats for GRIDSS config
Disable mapping and prestats for GRIDSS config
