[indra]

# Path to the REACH reading system's fat JAR
REACHPATH = 

# Version of REACH
REACH_VERSION = 

# Path to the EIDOS reading system's fat JAR
EIDOSPATH = 

# Path to the Sparser reading system folder
SPARSERPATH = 

# Path to the DRUM reading system folder
DRUMPATH = 

# The default memory limit for the Java/Scala interface
# (BioPAX, REACH, EIDOS)
INDRA_DEFAULT_JAVA_MEM_LIMIT = 8g

# API keys to access Elsevier content
ELSEVIER_API_KEY = 
ELSEVIER_INST_KEY = 

# API keys to access BioGRID content
BIOGRID_API_KEY = 

# Credentials for ndexbio.org
NDEX_USERNAME = 
NDEX_PASSWORD =

# Url and API Key for access to INDRA's Database Rest API
INDRA_DB_REST_URL =
INDRA_DB_REST_API_KEY =

# Default project name for aws resources
DEFAULT_AWS_PROJECT =

# Path to nxml2txt utility, used in ISI processor
NXML2TXT_PATH =

# Path to a python 2 interpreter, called by ISI processor
PYTHON2_PATH =

# Path to the SiteMapper's cache location
SITEMAPPER_CACHE_PATH =

[indra]

# Path to the REACH reading system's fat JAR
REACHPATH = 

# Version of REACH
REACH_VERSION = 

# Path to the EIDOS reading system's fat JAR
EIDOSPATH = 

# Path to the Sparser reading system folder
SPARSERPATH = 

# Path to the DRUM reading system folder
DRUMPATH = 

# The default memory limit for the Java/Scala interface
# (BioPAX, REACH, EIDOS)
INDRA_DEFAULT_JAVA_MEM_LIMIT = 8g

# API keys to access Elsevier content
ELSEVIER_API_KEY = 
ELSEVIER_INST_KEY = 

# API keys to access BioGRID content
BIOGRID_API_KEY = 

# Key to the CrossRef clickthrough API
CROSSREF_CLICKTHROUGH_KEY = 

# Credentials for ndexbio.org
NDEX_USERNAME = 
NDEX_PASSWORD =

# Url and API Key for access to INDRA's Database Rest API
INDRA_DB_REST_URL =
INDRA_DB_REST_API_KEY =

# Default project name for aws resources
DEFAULT_AWS_PROJECT =

# Path to nxml2txt utility, used in ISI processor
NXML2TXT_PATH =

# Path to a python 2 interpreter, called by ISI processor
PYTHON2_PATH =

# Path to the SiteMapper's cache location
SITEMAPPER_CACHE_PATH =

Add CrossRef entry to default config
Add CrossRef entry to default config
