version: 5

aliases:
  snpeff: GRCm38.74
  ensembl: mouse

variation:
  dbsnp: ../variation/mm10-dbSNP-2013-09-12.vcf

rnaseq:
  transcripts: ../rnaseq/ref-transcripts.gtf
  transcripts_mask: ../rnaseq/ref-transcripts-mask.gtf
  transcriptome_index:
    tophat: ../rnaseq/tophat/mm10_transcriptome.ver

version: 6

aliases:
  snpeff: GRCm38.74
  ensembl: mouse

variation:
  dbsnp: ../variation/mm10-dbSNP-2013-09-12.vcf.gz

rnaseq:
  transcripts: ../rnaseq/ref-transcripts.gtf
  transcripts_mask: ../rnaseq/ref-transcripts-mask.gtf
  transcriptome_index:
    tophat: ../rnaseq/tophat/mm10_transcriptome.ver

Swap mm10 dbSNP file to be bgzipped and tabix indexed to save space and match human and camFam3 resources
Swap mm10 dbSNP file to be bgzipped and tabix indexed to save space and match human and camFam3 resources
