package:
    name: repeatmasker
    version: 4.0.6
source:
    fn:  RepeatMasker-open-4-0-6.tar.gz
    url: http://www.repeatmasker.org/RepeatMasker-open-4-0-6.tar.gz
    md5: 324bcb707b23b06adfde34704a8ec0c4
    patches: 
      - patch1
build:
  number: 5
  detect_binary_files_with_prefix: False
  has_prefix_files:
    - bin/RepeatMasker
  skip: True # [ not linux ]

requirements:
  build:
    - perl-threaded
    - rmblast
  run:
    - rmblast
    - hmmer
    - trf
    - perl-threaded
    - perl-text-soundex

test:
  files:
    - rm_input1.fasta
    - sample_repeats.fasta
    - test_md5.txt

about:
    home: http://www.repeatmasker.org
    license: Open Software License v2.1
    summary: RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

package:
    name: repeatmasker
    version: 4.0.6
source:
    fn:  RepeatMasker-open-4-0-6.tar.gz
    url: http://www.repeatmasker.org/RepeatMasker-open-4-0-6.tar.gz
    md5: 324bcb707b23b06adfde34704a8ec0c4
    patches: 
      - patch1
build:
  number: 5
  detect_binary_files_with_prefix: False
  has_prefix_files:
    - bin/RepeatMasker
  skip: True # [ not linux ]

requirements:
  build:
    - perl-threaded
    - rmblast
  run:
    - rmblast
    - hmmer
    - trf
    - perl-threaded
    - perl-text-soundex

test:
  files:
    - rm_input1.fasta
    - sample_repeats.fasta
    - test_md5.txt
  commands:
# a test to run in addition to run_test.sh
    - RepeatMasker | grep 'RepeatMasker - Mask repetitive DNA' > /dev/null

about:
    home: http://www.repeatmasker.org
    license: Open Software License v2.1
    summary: RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

Add simple test in addition to file based run_test.sh
Add simple test in addition to file based run_test.sh
