upload:
  dir: upload
fc_date: '110907'
fc_name: ERP000591
details:
  - analysis: RNA-seq
    algorithm:
      transcriptome_align: True
      aligner: star
      quality_format: Standard
      trim_reads: read_through
      adapters: [truseq, polya]
      expression_caller: [sailfish]
    description: Test1
    files: [1_110907_ERP000591_1_fastq.txt, 1_110907_ERP000591_2_fastq.txt]
    genome_build: mm9
    lane: 1

upload:
  dir: upload
fc_date: '110907'
fc_name: ERP000591
details:
  - analysis: RNA-seq
    algorithm:
      fusion_mode: True
      variantcaller: [gatk]
      transcriptome_align: True
      aligner: star
      quality_format: Standard
      trim_reads: read_through
      adapters: [truseq, polya]
      expression_caller: [sailfish]
    description: Test1
    files: [1_110907_ERP000591_1_fastq.txt, 1_110907_ERP000591_2_fastq.txt]
    genome_build: mm9
    lane: 1

Add variantcalling and fusion calling to STAR test
Add variantcalling and fusion calling to STAR test
