upload:
  dir: upload
details:
  - analysis: scRNA-seq
    algorithm:
      umi_type: harvard-indrop
      singlecell_quantifier: kallisto
      minimum_barcode_depth: 500
    description: Test1
    files:
      - ../data/Harvard-inDrop/r1.fq.gz
      - ../data/Harvard-inDrop/r2.fq.gz
    genome_build: mm9

upload:
  dir: upload
details:
  - analysis: scRNA-seq
    algorithm:
      umi_type: harvard-indrop
      singlecell_quantifier: rapmap
      minimum_barcode_depth: 500
    description: Test1
    files:
      - ../data/Harvard-inDrop/r1.fq.gz
      - ../data/Harvard-inDrop/r2.fq.gz
    genome_build: mm9

Switch single-cell test to use Rapmap.
Switch single-cell test to use Rapmap.

kallisto support works but requires a manual intervention to get
going.

Addresses an issue in #1524.
