log:
    file: data/taca.log

analysis:
    HiSeqX:
        QC:
            max_percentage_undetermined_indexes_pooled_lane: 5
            max_percentage_undetermined_indexes_unpooled_lane: 20
            minimum_percentage_Q30_bases_per_lane: 75
            minimum_yield_per_lane: 305000000
            max_frequency_most_represented_und_index_pooled_lane: 5
            max_frequency_most_represented_und_index_unpooled_lane: 40
        bcl2fastq:
            bin: path_to_bcl_to_fastq
            options:
                - output-dir: Demultiplexing
        samplesheets_dir:
        analysis_server:
            host:
            port:
            user:
            sync:
                data_archive:
                include:
                    - "*.file"
    HiSeq:
        QC:
            max_number_undetermined_reads_simple_lane: 5000000
            max_percentage_undetermined_indexes_simple_lane: 5
            max_percentage_undetermined_indexes_NoIndex_lane: 30
            max_frequency_most_represented_und_index_NoIndex_lane: 40
        bcl2fastq:
            bin: path_to_bcl_to_fastq
            options:
                - output-dir: Demultiplexing
        samplesheets_dir:
        analysis_server:
            host:
            port:
            user:
            sync:
                data_archive:
                include:
                    - "*.file"

log:
    file: data/taca.log

analysis:
    HiSeqX:
        QC:
            max_percentage_undetermined_indexes_pooled_lane: 5
            max_percentage_undetermined_indexes_unpooled_lane: 20
            minimum_percentage_Q30_bases_per_lane: 75
            minimum_yield_per_lane: 305000000
            max_frequency_most_represented_und_index_pooled_lane: 5
            max_frequency_most_represented_und_index_unpooled_lane: 40
        bcl2fastq:
            bin: path_to_bcl_to_fastq
            options:
                - output-dir: Demultiplexing
        samplesheets_dir: "data"
        analysis_server:
            host:
            port:
            user:
            sync:
                data_archive:
                include:
                    - "*.file"
    HiSeq:
        QC:
            max_number_undetermined_reads_simple_lane: 5000000
            max_percentage_undetermined_indexes_simple_lane: 5
            max_percentage_undetermined_indexes_NoIndex_lane: 30
            max_frequency_most_represented_und_index_NoIndex_lane: 40
        bcl2fastq:
            bin: path_to_bcl_to_fastq
            options:
                - output-dir: Demultiplexing
        samplesheets_dir: "data"
        analysis_server:
            host:
            port:
            user:
            sync:
                data_archive:
                include:
                    - "*.file"

Fix path of samplesheet dir in test yaml
Fix path of samplesheet dir in test yaml
