package:
  name: im-fusion
  version: {{ environ.get('GIT_DESCRIBE_TAG', '')[1:]+ '+' + environ.get('GIT_DESCRIBE_NUMBER', '') }}

source:
  path: ../

requirements:
  build:
    - setuptools

    # Basic dependencies.
    - python
    - future
    - pandas
    - numexpr
    - pysam ==0.8.4
    - toolz
    - scipy
    - seaborn
    - pyfaidx
    - intervaltree
    - pathlib2 # [py27]
    - r
    - rpy2

  run:
    # Basic dependencies.
    - python
    - intervaltree
    - future
    - pandas
    - numexpr
    - pysam ==0.8.4
    - toolz
    - scipy
    - seaborn
    - pyfaidx
    - intervaltree
    - pathlib2 # [py27]
    - r
    - rpy2

    # Bioconda dependencies.
    - tophat
    - bowtie
    - subread

test:
  imports:
    - imfusion

  commands:
    - im-fusion -h
    - tophat --version
    - featureCounts -v
    - py.test $SRC_DIR

  requires:
    - mock
    - pytest
    - pytest-datafiles
    - pytest-mock
    - pytest-helpers-namespace

about:
  home: https://github.com/jrderuiter/im-fusion
  license: MIT
  summary: "IM-Fusion - Tool for identifying transposon insertions
    and their effects from RNA-sequencing data"

package:
  name: im-fusion
  version: {{ environ.get('GIT_DESCRIBE_TAG', '')[1:] }}

build:
  number: {{ environ.get('GIT_DESCRIBE_NUMBER', 0) }}

source:
  path: ../

requirements:
  build:
    - setuptools

    # Basic dependencies.
    - python
    - future
    - pandas
    - numexpr
    - pysam ==0.8.4
    - toolz
    - scipy
    - seaborn
    - pyfaidx
    - intervaltree
    - pathlib2 # [py27]
    - r
    - rpy2

  run:
    # Basic dependencies.
    - python
    - intervaltree
    - future
    - pandas
    - numexpr
    - pysam ==0.8.4
    - toolz
    - scipy
    - seaborn
    - pyfaidx
    - intervaltree
    - pathlib2 # [py27]
    - r
    - rpy2

    # Bioconda dependencies.
    - tophat
    - bowtie
    - subread

test:
  imports:
    - imfusion

  commands:
    - im-fusion -h
    - tophat --version
    - featureCounts -v
    - py.test $SRC_DIR

  requires:
    - mock
    - pytest
    - pytest-datafiles
    - pytest-mock
    - pytest-helpers-namespace

about:
  home: https://github.com/jrderuiter/im-fusion
  license: MIT
  summary: "IM-Fusion - Tool for identifying transposon insertions
    and their effects from RNA-sequencing data"

Change build tag in conda.
Change build tag in conda.
