"""Handles all imports from jnius to prevent conflicts resulting from attempts
to set JVM options while the VM is already running."""

import os
import warnings
import jnius_config

if '-Xmx4g' not in jnius_config.get_options():
    if not jnius_config.vm_running:
        jnius_config.add_options('-Xmx4g')
    else:
        warnings.warn("Couldn't set memory limit for Java VM because the VM "
                      "is already running.")

path_here = os.path.dirname(os.path.realpath(__file__))
cp = path_here + '/biopax/jars/paxtools.jar'
cp_existing = os.environ.get('CLASSPATH')

print 'before', os.environ.get('CLASSPATH')
if cp_existing is not None:
    os.environ['CLASSPATH'] = cp + ':' + cp_existing
else:
    os.environ['CLASSPATH'] = cp
print 'after', os.environ.get('CLASSPATH')

from jnius import autoclass, JavaException, cast


"""Handles all imports from jnius to prevent conflicts resulting from attempts
to set JVM options while the VM is already running."""

import os
import warnings
import jnius_config

if '-Xmx4g' not in jnius_config.get_options():
    if not jnius_config.vm_running:
        jnius_config.add_options('-Xmx4g')
    else:
        warnings.warn("Couldn't set memory limit for Java VM because the VM "
                      "is already running.")

path_here = os.path.dirname(os.path.realpath(__file__))
cp = path_here + '/biopax/jars/paxtools.jar'
cp_existing = os.environ.get('CLASSPATH')

if cp_existing is not None:
    os.environ['CLASSPATH'] = cp + ':' + cp_existing
else:
    os.environ['CLASSPATH'] = cp

from jnius import autoclass, JavaException, cast


Remove messages from Java VM
Remove messages from Java VM
