# hd4630_workshops
These are the included workshop materials for [Cornell HD4630: Introduction to fMRI Analysis](https://classes.cornell.edu/browse/roster/SP17/class/HD/4630), Spring 2017.

### What is this for?
This workshops series is designed to accompany [Nathan Spreng](http://lbc.human.cornell.edu/Home.html)'s course, HD4630. It aims to teach undergraduate and graduate students functional neuroimaging data analysis with little or no expectations of previous coding experience. 

### What's included?
* LaTeX presentations of desired workshop outcomes
* Source code for a Docker image containing an AFNI environment
* Shells scripts for getting and using data
* Jupyter notebook(s) demonstrating basic image preprocessing with python
* [A course website](https://emdupre.github.io/hd4630_workshops/categories) that walks through using this material

### What should I do?
Clone or download this repository. All relative paths assume that this repo will live on your desktop, so please put it there or you won't be able to access your data! You can also update the shell scripts with your preferred path, if you'd prefer. 

### What if I have other questions?
Open an issue! Or a pull request, if you're feeling particularly nice.

# hd4630_workshops
These are the included workshop materials for [Cornell HD4630: Introduction to fMRI Analysis](https://classes.cornell.edu/browse/roster/SP17/class/HD/4630), Spring 2017.

### What is this for?
This workshops series is designed to accompany [Nathan Spreng](http://lbc.human.cornell.edu/Home.html)'s course, HD4630. It aims to teach undergraduate and graduate students functional neuroimaging data analysis with little or no expectations of previous coding experience. 

### What's included?
* LaTeX presentations of desired workshop outcomes
* Source code for a Docker image containing an AFNI environment
* Shell and python scripts for getting and using data
* [A course website](https://emdupre.github.io/hd4630_workshops/categories) that walks through using this material

### What should I do?
Clone or download this repository. All relative paths assume that this repo will live on your desktop, so please put it there or you won't be able to access your data! You can also update the shell scripts with your preferred path, if you'd prefer. 

### What if I have other questions?
Open an issue! Or a pull request, if you're feeling particularly nice.

Remove reference to jupyter notebooks
Remove reference to jupyter notebooks