<?php

namespace ajax\details;

use \PDO as PDO;

/**
 * Web Service.
 * Returns Organisms with given ids
 */
class Organisms_to_traits extends \WebService {

    /**
     * @param $querydata[type_cvterm_id] array of trait type_cvterm_id
     * @returns array of organisms accoring to a specific trait type
     */
    public function execute($querydata) {
        global $db;
        
    }
    
}

?>


<?php

namespace ajax\details;

use \PDO as PDO;

/**
 * Web Service.
 * Returns Organisms with given ids
 */
class Organisms_to_traits extends \WebService {

    /**
     * @param $querydata[type_cvterm_id] array of trait type_cvterm_id
     * @returns array of organisms accoring to a specific trait type
     */
    public function execute($querydata) {
        global $db;
        $type_cvterm_id = $querydata['trait_id'];
        
        $query_get_organism_by_trait = <<<EOF
SELECT * FROM organism, (SELECT DISTINCT organism_id FROM trait_entry WHERE type_cvterm_id = :type_cvterm_id) AS ids WHERE organism.organism_id = ids.organism_id
EOF;
        $stm_get_organism_by_trait = $db->prepare($query_get_organism_by_trait);
        $stm_get_organism_by_trait->bindValue('type_cvterm_id', $type_cvterm_id);
        $stm_get_organism_by_trait->execute();
        
        $data = array();
        
        while ($row = $stm_get_organism_by_trait->fetch(PDO::FETCH_ASSOC)) {
            $result = array();
            $result['organism_id'] = $row['organism_id'];
            $result['scientific_name'] = $row['species'];
            $result['rank'] = $row['genus'];
            $result['common_name'] = $row['common_name'];
            if($row["abbreviation"]!=null){
                $result['rank']='species';
            }
            $data[] = $result;
        }
        return $data;
        
    }
    
}

?>


Select all organisms to a specific trait by its type_cvterm_id
Select all organisms to a specific trait by its type_cvterm_id
