import _surface
import chimera
try:
  import chimera.runCommand
except:
  pass
from VolumePath import markerset as ms
try:
  from VolumePath import Marker_Set, Link
  new_marker_set=Marker_Set
except:
  from VolumePath import volume_path_dialog
  d= volume_path_dialog(True)
  new_marker_set= d.new_marker_set
marker_sets={}
surf_sets={}
if "particle_0 geometry" not in marker_sets:
  s=new_marker_set('particle_0 geometry')
  marker_sets["particle_0 geometry"]=s
s= marker_sets["particle_0 geometry"]
mark=s.place_marker((3763.82, 7378.64, 8909.06), (0, 1, 0), 846)
if "particle_1 geometry" not in marker_sets:
  s=new_marker_set('particle_1 geometry')
  marker_sets["particle_1 geometry"]=s
s= marker_sets["particle_1 geometry"]
mark=s.place_marker((4075.56, 6293, 11371.3), (0.7, 0.7, 0.7), 846)
if "particle_2 geometry" not in marker_sets:
  s=new_marker_set('particle_2 geometry')
  marker_sets["particle_2 geometry"]=s
s= marker_sets["particle_2 geometry"]
mark=s.place_marker((3212.14, 7739.98, 10417.3), (0.7, 0.7, 0.7), 846)
if "particle_3 geometry" not in marker_sets:
  s=new_marker_set('particle_3 geometry')
  marker_sets["particle_3 geometry"]=s
s= marker_sets["particle_3 geometry"]
mark=s.place_marker((3756.32, 7454.88, 9815.32), (0.7, 0.7, 0.7), 846)
if "particle_4 geometry" not in marker_sets:
  s=new_marker_set('particle_4 geometry')
  marker_sets["particle_4 geometry"]=s
s= marker_sets["particle_4 geometry"]
mark=s.place_marker((3722.23, 6884.64, 9203.9), (0.7, 0.7, 0.7), 846)
if "particle_5 geometry" not in marker_sets:
  s=new_marker_set('particle_5 geometry')
  marker_sets["particle_5 geometry"]=s
s= marker_sets["particle_5 geometry"]
mark=s.place_marker((4447.47, 8036.77, 9071.84), (0.7, 0.7, 0.7), 846)
if "particle_6 geometry" not in marker_sets:
  s=new_marker_set('particle_6 geometry')
  marker_sets["particle_6 geometry"]=s
s= marker_sets["particle_6 geometry"]
mark=s.place_marker((5963.8, 8612.86, 10618.1), (0.7, 0.7, 0.7), 846)
if "particle_7 geometry" not in marker_sets:
  s=new_marker_set('particle_7 geometry')
  marker_sets["particle_7 geometry"]=s
s= marker_sets["particle_7 geometry"]
mark=s.place_marker((4519.14, 8999.13, 8780.96), (0.7, 0.7, 0.7), 846)
if "particle_8 geometry" not in marker_sets:
  s=new_marker_set('particle_8 geometry')
  marker_sets["particle_8 geometry"]=s
s= marker_sets["particle_8 geometry"]
mark=s.place_marker((4850.96, 8732.68, 8201.42), (0.7, 0.7, 0.7), 846)
if "particle_9 geometry" not in marker_sets:
  s=new_marker_set('particle_9 geometry')
  marker_sets["particle_9 geometry"]=s
s= marker_sets["particle_9 geometry"]
mark=s.place_marker((5774.62, 9160.25, 7581.94), (0.7, 0.7, 0.7), 846)
if "particle_10 geometry" not in marker_sets:
  s=new_marker_set('particle_10 geometry')
  marker_sets["particle_10 geometry"]=s
s= marker_sets["particle_10 geometry"]
mark=s.place_marker((4131.86, 10297.8, 7732.12), (0, 1, 0), 846)
if "particle_11 geometry" not in marker_sets:
  s=new_marker_set('particle_11 geometry')
  marker_sets["particle_11 geometry"]=s
s= marker_sets["particle_11 geometry"]
mark=s.place_marker((2625.97, 8794.96, 7896.56), (0.7, 0.7, 0.7), 846)
if "particle_12 geometry" not in marker_sets:
  s=new_marker_set('particle_12 geometry')
  marker_sets["particle_12 geometry"]=s
s= marker_sets["particle_12 geometry"]
mark=s.place_marker((3843.39, 10308.3, 7847.39), (0.7, 0.7, 0.7), 846)
if "particle_13 geometry" not in marker_sets:
  s=new_marker_set('particle_13 geometry')
  marker_sets["particle_13 geometry"]=s
s= marker_sets["particle_13 geometry"]
mark=s.place_marker((4809.79, 8997.14, 6978.11), (0.7, 0.7, 0.7), 846)
if "particle_14 geometry" not in marker_sets:
  s=new_marker_set('particle_14 geometry')
  marker_sets["particle_14 geometry"]=s
s= marker_sets["particle_14 geometry"]
mark=s.place_marker((3565.05, 9379.13, 7568.5), (0.7, 0.7, 0.7), 846)
if "particle_15 geometry" not in marker_sets:
  s=new_marker_set('particle_15 geometry')
  marker_sets["particle_15 geometry"]=s
s= marker_sets["particle_15 geometry"]
mark=s.place_marker((1657.6, 9510.15, 6758.8), (0.7, 0.7, 0.7), 846)
if "particle_16 geometry" not in marker_sets:
  s=new_marker_set('particle_16 geometry')
  marker_sets["particle_16 geometry"]=s
s= marker_sets["particle_16 geometry"]
mark=s.place_marker((3289.88, 10125.7, 6166.34), (0.7, 0.7, 0.7), 846)
if "particle_17 geometry" not in marker_sets:
  s=new_marker_set('particle_17 geometry')
  marker_sets["particle_17 geometry"]=s
s= marker_sets["particle_17 geometry"]
mark=s.place_marker((3475.67, 9671.28, 6293.59), (0.7, 0.7, 0.7), 846)
if "particle_18 geometry" not in marker_sets:
  s=new_marker_set('particle_18 geometry')
  marker_sets["particle_18 geometry"]=s
s= marker_sets["particle_18 geometry"]
mark=s.place_marker((2856.99, 8133.6, 6932.09), (0.7, 0.7, 0.7), 846)
if "particle_19 geometry" not in marker_sets:
  s=new_marker_set('particle_19 geometry')
  marker_sets["particle_19 geometry"]=s
s= marker_sets["particle_19 geometry"]
mark=s.place_marker((3808.39, 9192.13, 5800.75), (0.7, 0.7, 0.7), 846)
if "particle_20 geometry" not in marker_sets:
  s=new_marker_set('particle_20 geometry')
  marker_sets["particle_20 geometry"]=s
s= marker_sets["particle_20 geometry"]
mark=s.place_marker((2951.43, 8527.36, 6746.3), (0, 1, 0), 846)
if "particle_21 geometry" not in marker_sets:
  s=new_marker_set('particle_21 geometry')
  marker_sets["particle_21 geometry"]=s
s= marker_sets["particle_21 geometry"]
mark=s.place_marker((4600.38, 7948.76, 7147.76), (0.7, 0.7, 0.7), 846)
if "particle_22 geometry" not in marker_sets:
  s=new_marker_set('particle_22 geometry')
  marker_sets["particle_22 geometry"]=s
s= marker_sets["particle_22 geometry"]
mark=s.place_marker((2492.54, 7003.57, 7229.65), (0.7, 0.7, 0.7), 846)
if "particle_23 geometry" not in marker_sets:
  s=new_marker_set('particle_23 geometry')
  marker_sets["particle_23 geometry"]=s
s= marker_sets["particle_23 geometry"]
mark=s.place_marker((2734.23, 7235.97, 6855.03), (0.7, 0.7, 0.7), 846)
if "particle_24 geometry" not in marker_sets:
  s=new_marker_set('particle_24 geometry')
  marker_sets["particle_24 geometry"]=s
s= marker_sets["particle_24 geometry"]
mark=s.place_marker((5078.35, 7412.73, 6156.46), (0.7, 0.7, 0.7), 846)
if "particle_25 geometry" not in marker_sets:
  s=new_marker_set('particle_25 geometry')
  marker_sets["particle_25 geometry"]=s
s= marker_sets["particle_25 geometry"]
mark=s.place_marker((3567.94, 6082.5, 6736.85), (0.7, 0.7, 0.7), 846)
if "particle_26 geometry" not in marker_sets:
  s=new_marker_set('particle_26 geometry')
  marker_sets["particle_26 geometry"]=s
s= marker_sets["particle_26 geometry"]
mark=s.place_marker((1820.18, 6309.15, 7300.65), (0.7, 0.7, 0.7), 846)
if "particle_27 geometry" not in marker_sets:
  s=new_marker_set('particle_27 geometry')
  marker_sets["particle_27 geometry"]=s
s= marker_sets["particle_27 geometry"]
mark=s.place_marker((2840.06, 6900.41, 6702.36), (0.7, 0.7, 0.7), 846)
if "particle_28 geometry" not in marker_sets:
  s=new_marker_set('particle_28 geometry')
  marker_sets["particle_28 geometry"]=s
s= marker_sets["particle_28 geometry"]
mark=s.place_marker((3701.97, 8361.22, 6042.8), (0.7, 0.7, 0.7), 846)
if "particle_29 geometry" not in marker_sets:
  s=new_marker_set('particle_29 geometry')
  marker_sets["particle_29 geometry"]=s
s= marker_sets["particle_29 geometry"]
mark=s.place_marker((4247.37, 7888.16, 6330.92), (0.7, 0.7, 0.7), 846)
if "particle_30 geometry" not in marker_sets:
  s=new_marker_set('particle_30 geometry')
  marker_sets["particle_30 geometry"]=s
s= marker_sets["particle_30 geometry"]
mark=s.place_marker((3275.87, 7058.4, 5575.66), (0, 1, 0), 846)
if "particle_31 geometry" not in marker_sets:
  s=new_marker_set('particle_31 geometry')
  marker_sets["particle_31 geometry"]=s
s= marker_sets["particle_31 geometry"]
mark=s.place_marker((2983.79, 5535.8, 5198.87), (0.7, 0.7, 0.7), 846)
if "particle_32 geometry" not in marker_sets:
  s=new_marker_set('particle_32 geometry')
  marker_sets["particle_32 geometry"]=s
s= marker_sets["particle_32 geometry"]
mark=s.place_marker((3035.55, 5894.01, 5745.43), (0.7, 0.7, 0.7), 846)
if "particle_33 geometry" not in marker_sets:
  s=new_marker_set('particle_33 geometry')
  marker_sets["particle_33 geometry"]=s
s= marker_sets["particle_33 geometry"]
mark=s.place_marker((3942.02, 5666.68, 6934.37), (0.7, 0.7, 0.7), 846)
if "particle_34 geometry" not in marker_sets:
  s=new_marker_set('particle_34 geometry')
  marker_sets["particle_34 geometry"]=s
s= marker_sets["particle_34 geometry"]
mark=s.place_marker((4497.3, 6228.68, 6813.32), (0.7, 0.7, 0.7), 846)
if "particle_35 geometry" not in marker_sets:
  s=new_marker_set('particle_35 geometry')
  marker_sets["particle_35 geometry"]=s
s= marker_sets["particle_35 geometry"]
mark=s.place_marker((4009.94, 4937.89, 6072.27), (0.7, 0.7, 0.7), 846)
if "particle_36 geometry" not in marker_sets:
  s=new_marker_set('particle_36 geometry')
  marker_sets["particle_36 geometry"]=s
s= marker_sets["particle_36 geometry"]
mark=s.place_marker((6330.52, 6607, 6220.32), (1, 0.7, 0), 846)
if "particle_37 geometry" not in marker_sets:
  s=new_marker_set('particle_37 geometry')
  marker_sets["particle_37 geometry"]=s
s= marker_sets["particle_37 geometry"]
mark=s.place_marker((4517.24, 4730.31, 6886.01), (0.7, 0.7, 0.7), 846)
if "particle_38 geometry" not in marker_sets:
  s=new_marker_set('particle_38 geometry')
  marker_sets["particle_38 geometry"]=s
s= marker_sets["particle_38 geometry"]
mark=s.place_marker((4885.4, 5244.69, 5531.74), (0.7, 0.7, 0.7), 846)
if "particle_39 geometry" not in marker_sets:
  s=new_marker_set('particle_39 geometry')
  marker_sets["particle_39 geometry"]=s
s= marker_sets["particle_39 geometry"]
mark=s.place_marker((3613.62, 3201.24, 5532), (1, 0.7, 0), 846)
if "particle_40 geometry" not in marker_sets:
  s=new_marker_set('particle_40 geometry')
  marker_sets["particle_40 geometry"]=s
s= marker_sets["particle_40 geometry"]
mark=s.place_marker((4897.05, 4464.85, 4360.63), (0.7, 0.7, 0.7), 846)
if "particle_41 geometry" not in marker_sets:
  s=new_marker_set('particle_41 geometry')
  marker_sets["particle_41 geometry"]=s
s= marker_sets["particle_41 geometry"]
mark=s.place_marker((4478, 3421.4, 3333.23), (0.7, 0.7, 0.7), 846)
if "particle_42 geometry" not in marker_sets:
  s=new_marker_set('particle_42 geometry')
  marker_sets["particle_42 geometry"]=s
s= marker_sets["particle_42 geometry"]
mark=s.place_marker((3964.83, 3422.3, 3866.17), (0.7, 0.7, 0.7), 846)
if "particle_43 geometry" not in marker_sets:
  s=new_marker_set('particle_43 geometry')
  marker_sets["particle_43 geometry"]=s
s= marker_sets["particle_43 geometry"]
mark=s.place_marker((4301.33, 3169.27, 3893.87), (0.7, 0.7, 0.7), 846)
if "particle_44 geometry" not in marker_sets:
  s=new_marker_set('particle_44 geometry')
  marker_sets["particle_44 geometry"]=s
s= marker_sets["particle_44 geometry"]
mark=s.place_marker((3410.65, 2922.93, 3845.9), (0.7, 0.7, 0.7), 846)
if "particle_45 geometry" not in marker_sets:
  s=new_marker_set('particle_45 geometry')
  marker_sets["particle_45 geometry"]=s
s= marker_sets["particle_45 geometry"]
mark=s.place_marker((4034.15, 3123.19, 4220.86), (0.7, 0.7, 0.7), 846)
if "particle_46 geometry" not in marker_sets:
  s=new_marker_set('particle_46 geometry')
  marker_sets["particle_46 geometry"]=s
s= marker_sets["particle_46 geometry"]
mark=s.place_marker((4097.3, 2884.79, 3078.25), (0.7, 0.7, 0.7), 846)
if "particle_47 geometry" not in marker_sets:
  s=new_marker_set('particle_47 geometry')
  marker_sets["particle_47 geometry"]=s
s= marker_sets["particle_47 geometry"]
mark=s.place_marker((3829.41, 2147.6, 3277.85), (0.7, 0.7, 0.7), 846)
if "particle_48 geometry" not in marker_sets:
  s=new_marker_set('particle_48 geometry')
  marker_sets["particle_48 geometry"]=s
s= marker_sets["particle_48 geometry"]
mark=s.place_marker((4391.23, 1590.18, 3632.52), (0.7, 0.7, 0.7), 846)
if "particle_49 geometry" not in marker_sets:
  s=new_marker_set('particle_49 geometry')
  marker_sets["particle_49 geometry"]=s
s= marker_sets["particle_49 geometry"]
mark=s.place_marker((5853.37, 2730.3, 4243.52), (0.7, 0.7, 0.7), 846)
if "particle_50 geometry" not in marker_sets:
  s=new_marker_set('particle_50 geometry')
  marker_sets["particle_50 geometry"]=s
s= marker_sets["particle_50 geometry"]
mark=s.place_marker((4319.83, 3466.28, 3859.81), (0.7, 0.7, 0.7), 846)
if "particle_51 geometry" not in marker_sets:
  s=new_marker_set('particle_51 geometry')
  marker_sets["particle_51 geometry"]=s
s= marker_sets["particle_51 geometry"]
mark=s.place_marker((5731.91, 2425.06, 4639.9), (0, 1, 0), 846)
if "particle_52 geometry" not in marker_sets:
  s=new_marker_set('particle_52 geometry')
  marker_sets["particle_52 geometry"]=s
s= marker_sets["particle_52 geometry"]
mark=s.place_marker((4451.3, 3374.19, 1607.22), (0.7, 0.7, 0.7), 846)
if "particle_53 geometry" not in marker_sets:
  s=new_marker_set('particle_53 geometry')
  marker_sets["particle_53 geometry"]=s
s= marker_sets["particle_53 geometry"]
mark=s.place_marker((4373.03, 2634.8, 3836.83), (0.7, 0.7, 0.7), 846)
if "particle_54 geometry" not in marker_sets:
  s=new_marker_set('particle_54 geometry')
  marker_sets["particle_54 geometry"]=s
s= marker_sets["particle_54 geometry"]
mark=s.place_marker((4586.49, 1580.8, 4294.33), (0.7, 0.7, 0.7), 846)
if "particle_55 geometry" not in marker_sets:
  s=new_marker_set('particle_55 geometry')
  marker_sets["particle_55 geometry"]=s
s= marker_sets["particle_55 geometry"]
mark=s.place_marker((4354.61, 2972.17, 3452.93), (0.7, 0.7, 0.7), 846)
if "particle_56 geometry" not in marker_sets:
  s=new_marker_set('particle_56 geometry')
  marker_sets["particle_56 geometry"]=s
s= marker_sets["particle_56 geometry"]
mark=s.place_marker((5225.21, 3706.49, 4291.41), (0.7, 0.7, 0.7), 846)
if "particle_57 geometry" not in marker_sets:
  s=new_marker_set('particle_57 geometry')
  marker_sets["particle_57 geometry"]=s
s= marker_sets["particle_57 geometry"]
mark=s.place_marker((4284.91, 1906.22, 3725.87), (0.7, 0.7, 0.7), 846)
if "particle_58 geometry" not in marker_sets:
  s=new_marker_set('particle_58 geometry')
  marker_sets["particle_58 geometry"]=s
s= marker_sets["particle_58 geometry"]
mark=s.place_marker((5160.12, 3361.85, 3254.5), (0.7, 0.7, 0.7), 846)
if "particle_59 geometry" not in marker_sets:
  s=new_marker_set('particle_59 geometry')
  marker_sets["particle_59 geometry"]=s
s= marker_sets["particle_59 geometry"]
mark=s.place_marker((5116.55, 2147.92, 4697.98), (0.7, 0.7, 0.7), 846)
if "particle_60 geometry" not in marker_sets:
  s=new_marker_set('particle_60 geometry')
  marker_sets["particle_60 geometry"]=s
s= marker_sets["particle_60 geometry"]
mark=s.place_marker((5390.46, 1206.84, 3195.57), (0.7, 0.7, 0.7), 846)
if "particle_61 geometry" not in marker_sets:
  s=new_marker_set('particle_61 geometry')
  marker_sets["particle_61 geometry"]=s
s= marker_sets["particle_61 geometry"]
mark=s.place_marker((6922.21, 2248.24, 4122.21), (0, 1, 0), 846)
if "particle_62 geometry" not in marker_sets:
  s=new_marker_set('particle_62 geometry')
  marker_sets["particle_62 geometry"]=s
s= marker_sets["particle_62 geometry"]
mark=s.place_marker((8495.9, 3540.72, 4523.94), (0.7, 0.7, 0.7), 846)
if "particle_63 geometry" not in marker_sets:
  s=new_marker_set('particle_63 geometry')
  marker_sets["particle_63 geometry"]=s
s= marker_sets["particle_63 geometry"]
mark=s.place_marker((6987.11, 2914.77, 3340.45), (0.7, 0.7, 0.7), 846)
if "particle_64 geometry" not in marker_sets:
  s=new_marker_set('particle_64 geometry')
  marker_sets["particle_64 geometry"]=s
s= marker_sets["particle_64 geometry"]
mark=s.place_marker((5263.61, 2673.37, 1767.96), (0.7, 0.7, 0.7), 846)
if "particle_65 geometry" not in marker_sets:
  s=new_marker_set('particle_65 geometry')
  marker_sets["particle_65 geometry"]=s
s= marker_sets["particle_65 geometry"]
mark=s.place_marker((6880.81, 1687.15, 2293.35), (0.7, 0.7, 0.7), 846)
if "particle_66 geometry" not in marker_sets:
  s=new_marker_set('particle_66 geometry')
  marker_sets["particle_66 geometry"]=s
s= marker_sets["particle_66 geometry"]
mark=s.place_marker((6191.51, 1671.05, 1662.44), (0.7, 0.7, 0.7), 846)
if "particle_67 geometry" not in marker_sets:
  s=new_marker_set('particle_67 geometry')
  marker_sets["particle_67 geometry"]=s
s= marker_sets["particle_67 geometry"]
mark=s.place_marker((5952.76, 3342.06, 1757.13), (0.7, 0.7, 0.7), 846)
if "particle_68 geometry" not in marker_sets:
  s=new_marker_set('particle_68 geometry')
  marker_sets["particle_68 geometry"]=s
s= marker_sets["particle_68 geometry"]
mark=s.place_marker((7553.68, 3168.31, 625.208), (0.7, 0.7, 0.7), 846)
if "particle_69 geometry" not in marker_sets:
  s=new_marker_set('particle_69 geometry')
  marker_sets["particle_69 geometry"]=s
s= marker_sets["particle_69 geometry"]
mark=s.place_marker((6802.4, 3381.69, 1286.36), (0.7, 0.7, 0.7), 846)
if "particle_70 geometry" not in marker_sets:
  s=new_marker_set('particle_70 geometry')
  marker_sets["particle_70 geometry"]=s
s= marker_sets["particle_70 geometry"]
mark=s.place_marker((7762.05, 1751.17, 1244.59), (0.7, 0.7, 0.7), 846)
if "particle_71 geometry" not in marker_sets:
  s=new_marker_set('particle_71 geometry')
  marker_sets["particle_71 geometry"]=s
s= marker_sets["particle_71 geometry"]
mark=s.place_marker((6834.85, 3567.43, 1932.83), (0, 1, 0), 846)
if "particle_72 geometry" not in marker_sets:
  s=new_marker_set('particle_72 geometry')
  marker_sets["particle_72 geometry"]=s
s= marker_sets["particle_72 geometry"]
mark=s.place_marker((8046.79, 2759.87, 2094.86), (0.7, 0.7, 0.7), 846)
if "particle_73 geometry" not in marker_sets:
  s=new_marker_set('particle_73 geometry')
  marker_sets["particle_73 geometry"]=s
s= marker_sets["particle_73 geometry"]
mark=s.place_marker((6636.91, 2161.07, 1311.45), (0.7, 0.7, 0.7), 846)
if "particle_74 geometry" not in marker_sets:
  s=new_marker_set('particle_74 geometry')
  marker_sets["particle_74 geometry"]=s
s= marker_sets["particle_74 geometry"]
mark=s.place_marker((8048.99, 3230.44, 2197.58), (0, 1, 0), 846)
for k in surf_sets.keys():
  chimera.openModels.add([surf_sets[k]])
