import _surface
import chimera
try:
  import chimera.runCommand
except:
  pass
from VolumePath import markerset as ms
try:
  from VolumePath import Marker_Set, Link
  new_marker_set=Marker_Set
except:
  from VolumePath import volume_path_dialog
  d= volume_path_dialog(True)
  new_marker_set= d.new_marker_set
marker_sets={}
surf_sets={}
if "particle_0 geometry" not in marker_sets:
  s=new_marker_set('particle_0 geometry')
  marker_sets["particle_0 geometry"]=s
s= marker_sets["particle_0 geometry"]
mark=s.place_marker((3938.31, 9050.35, 7606.58), (0, 1, 0), 846)
if "particle_1 geometry" not in marker_sets:
  s=new_marker_set('particle_1 geometry')
  marker_sets["particle_1 geometry"]=s
s= marker_sets["particle_1 geometry"]
mark=s.place_marker((5359.22, 10505, 9279.66), (0.7, 0.7, 0.7), 846)
if "particle_2 geometry" not in marker_sets:
  s=new_marker_set('particle_2 geometry')
  marker_sets["particle_2 geometry"]=s
s= marker_sets["particle_2 geometry"]
mark=s.place_marker((3747.33, 10537.6, 8346.76), (0.7, 0.7, 0.7), 846)
if "particle_3 geometry" not in marker_sets:
  s=new_marker_set('particle_3 geometry')
  marker_sets["particle_3 geometry"]=s
s= marker_sets["particle_3 geometry"]
mark=s.place_marker((3689.35, 9572.48, 8352.01), (0.7, 0.7, 0.7), 846)
if "particle_4 geometry" not in marker_sets:
  s=new_marker_set('particle_4 geometry')
  marker_sets["particle_4 geometry"]=s
s= marker_sets["particle_4 geometry"]
mark=s.place_marker((4362.35, 9032.19, 7898.96), (0.7, 0.7, 0.7), 846)
if "particle_5 geometry" not in marker_sets:
  s=new_marker_set('particle_5 geometry')
  marker_sets["particle_5 geometry"]=s
s= marker_sets["particle_5 geometry"]
mark=s.place_marker((2950.7, 8696.91, 7802.59), (0.7, 0.7, 0.7), 846)
if "particle_6 geometry" not in marker_sets:
  s=new_marker_set('particle_6 geometry')
  marker_sets["particle_6 geometry"]=s
s= marker_sets["particle_6 geometry"]
mark=s.place_marker((1651.98, 8461.39, 9633.35), (0.7, 0.7, 0.7), 846)
if "particle_7 geometry" not in marker_sets:
  s=new_marker_set('particle_7 geometry')
  marker_sets["particle_7 geometry"]=s
s= marker_sets["particle_7 geometry"]
mark=s.place_marker((2091.18, 8838.34, 7340.33), (0.7, 0.7, 0.7), 846)
if "particle_8 geometry" not in marker_sets:
  s=new_marker_set('particle_8 geometry')
  marker_sets["particle_8 geometry"]=s
s= marker_sets["particle_8 geometry"]
mark=s.place_marker((2279.43, 8569.53, 7199), (0.7, 0.7, 0.7), 846)
if "particle_9 geometry" not in marker_sets:
  s=new_marker_set('particle_9 geometry')
  marker_sets["particle_9 geometry"]=s
s= marker_sets["particle_9 geometry"]
mark=s.place_marker((1482.54, 7420.2, 6939.33), (0.7, 0.7, 0.7), 846)
if "particle_10 geometry" not in marker_sets:
  s=new_marker_set('particle_10 geometry')
  marker_sets["particle_10 geometry"]=s
s= marker_sets["particle_10 geometry"]
mark=s.place_marker((1221.52, 9131.52, 5936.5), (0, 1, 0), 846)
if "particle_11 geometry" not in marker_sets:
  s=new_marker_set('particle_11 geometry')
  marker_sets["particle_11 geometry"]=s
s= marker_sets["particle_11 geometry"]
mark=s.place_marker((3265.52, 9455.81, 5583.27), (0.7, 0.7, 0.7), 846)
if "particle_12 geometry" not in marker_sets:
  s=new_marker_set('particle_12 geometry')
  marker_sets["particle_12 geometry"]=s
s= marker_sets["particle_12 geometry"]
mark=s.place_marker((1351.42, 9439.81, 5956.39), (0.7, 0.7, 0.7), 846)
if "particle_13 geometry" not in marker_sets:
  s=new_marker_set('particle_13 geometry')
  marker_sets["particle_13 geometry"]=s
s= marker_sets["particle_13 geometry"]
mark=s.place_marker((2173.54, 7865.74, 6396.32), (0.7, 0.7, 0.7), 846)
if "particle_14 geometry" not in marker_sets:
  s=new_marker_set('particle_14 geometry')
  marker_sets["particle_14 geometry"]=s
s= marker_sets["particle_14 geometry"]
mark=s.place_marker((2213.59, 8998.2, 5777.54), (0.7, 0.7, 0.7), 846)
if "particle_15 geometry" not in marker_sets:
  s=new_marker_set('particle_15 geometry')
  marker_sets["particle_15 geometry"]=s
s= marker_sets["particle_15 geometry"]
mark=s.place_marker((3078.49, 10128, 4345.83), (0.7, 0.7, 0.7), 846)
if "particle_16 geometry" not in marker_sets:
  s=new_marker_set('particle_16 geometry')
  marker_sets["particle_16 geometry"]=s
s= marker_sets["particle_16 geometry"]
mark=s.place_marker((1652.13, 8620.41, 4253.1), (0.7, 0.7, 0.7), 846)
if "particle_17 geometry" not in marker_sets:
  s=new_marker_set('particle_17 geometry')
  marker_sets["particle_17 geometry"]=s
s= marker_sets["particle_17 geometry"]
mark=s.place_marker((1902.09, 8316.59, 4594.19), (0.7, 0.7, 0.7), 846)
if "particle_18 geometry" not in marker_sets:
  s=new_marker_set('particle_18 geometry')
  marker_sets["particle_18 geometry"]=s
s= marker_sets["particle_18 geometry"]
mark=s.place_marker((3483.43, 8574.65, 5205.54), (0.7, 0.7, 0.7), 846)
if "particle_19 geometry" not in marker_sets:
  s=new_marker_set('particle_19 geometry')
  marker_sets["particle_19 geometry"]=s
s= marker_sets["particle_19 geometry"]
mark=s.place_marker((3873.22, 9677.72, 5479.78), (0.7, 0.7, 0.7), 846)
if "particle_20 geometry" not in marker_sets:
  s=new_marker_set('particle_20 geometry')
  marker_sets["particle_20 geometry"]=s
s= marker_sets["particle_20 geometry"]
mark=s.place_marker((3038.74, 8352.1, 4858.75), (0, 1, 0), 846)
if "particle_21 geometry" not in marker_sets:
  s=new_marker_set('particle_21 geometry')
  marker_sets["particle_21 geometry"]=s
s= marker_sets["particle_21 geometry"]
mark=s.place_marker((3079.61, 7539.5, 6344.48), (0.7, 0.7, 0.7), 846)
if "particle_22 geometry" not in marker_sets:
  s=new_marker_set('particle_22 geometry')
  marker_sets["particle_22 geometry"]=s
s= marker_sets["particle_22 geometry"]
mark=s.place_marker((4687.42, 8973.31, 5605.18), (0.7, 0.7, 0.7), 846)
if "particle_23 geometry" not in marker_sets:
  s=new_marker_set('particle_23 geometry')
  marker_sets["particle_23 geometry"]=s
s= marker_sets["particle_23 geometry"]
mark=s.place_marker((4221.48, 8476.72, 5366.76), (0.7, 0.7, 0.7), 846)
if "particle_24 geometry" not in marker_sets:
  s=new_marker_set('particle_24 geometry')
  marker_sets["particle_24 geometry"]=s
s= marker_sets["particle_24 geometry"]
mark=s.place_marker((3397.33, 6389.9, 5826.73), (0.7, 0.7, 0.7), 846)
if "particle_25 geometry" not in marker_sets:
  s=new_marker_set('particle_25 geometry')
  marker_sets["particle_25 geometry"]=s
s= marker_sets["particle_25 geometry"]
mark=s.place_marker((5131.29, 7458.93, 6062.08), (0.7, 0.7, 0.7), 846)
if "particle_26 geometry" not in marker_sets:
  s=new_marker_set('particle_26 geometry')
  marker_sets["particle_26 geometry"]=s
s= marker_sets["particle_26 geometry"]
mark=s.place_marker((5636.17, 9221.37, 5582.99), (0.7, 0.7, 0.7), 846)
if "particle_27 geometry" not in marker_sets:
  s=new_marker_set('particle_27 geometry')
  marker_sets["particle_27 geometry"]=s
s= marker_sets["particle_27 geometry"]
mark=s.place_marker((4730.04, 8381.58, 5473.52), (0.7, 0.7, 0.7), 846)
if "particle_28 geometry" not in marker_sets:
  s=new_marker_set('particle_28 geometry')
  marker_sets["particle_28 geometry"]=s
s= marker_sets["particle_28 geometry"]
mark=s.place_marker((3236.36, 7679.91, 4819.49), (0.7, 0.7, 0.7), 846)
if "particle_29 geometry" not in marker_sets:
  s=new_marker_set('particle_29 geometry')
  marker_sets["particle_29 geometry"]=s
s= marker_sets["particle_29 geometry"]
mark=s.place_marker((4321.51, 8624.23, 5414.07), (0.7, 0.7, 0.7), 846)
if "particle_30 geometry" not in marker_sets:
  s=new_marker_set('particle_30 geometry')
  marker_sets["particle_30 geometry"]=s
s= marker_sets["particle_30 geometry"]
mark=s.place_marker((4704.09, 7504.73, 4636.87), (0, 1, 0), 846)
if "particle_31 geometry" not in marker_sets:
  s=new_marker_set('particle_31 geometry')
  marker_sets["particle_31 geometry"]=s
s= marker_sets["particle_31 geometry"]
mark=s.place_marker((6173.8, 7294.33, 5229.67), (0.7, 0.7, 0.7), 846)
if "particle_32 geometry" not in marker_sets:
  s=new_marker_set('particle_32 geometry')
  marker_sets["particle_32 geometry"]=s
s= marker_sets["particle_32 geometry"]
mark=s.place_marker((5725.26, 7339.7, 5121.54), (0.7, 0.7, 0.7), 846)
if "particle_33 geometry" not in marker_sets:
  s=new_marker_set('particle_33 geometry')
  marker_sets["particle_33 geometry"]=s
s= marker_sets["particle_33 geometry"]
mark=s.place_marker((4194.35, 7596.27, 6032.58), (0.7, 0.7, 0.7), 846)
if "particle_34 geometry" not in marker_sets:
  s=new_marker_set('particle_34 geometry')
  marker_sets["particle_34 geometry"]=s
s= marker_sets["particle_34 geometry"]
mark=s.place_marker((4680.24, 6915.25, 6508.02), (0.7, 0.7, 0.7), 846)
if "particle_35 geometry" not in marker_sets:
  s=new_marker_set('particle_35 geometry')
  marker_sets["particle_35 geometry"]=s
s= marker_sets["particle_35 geometry"]
mark=s.place_marker((6128.24, 6485.87, 6085.58), (0.7, 0.7, 0.7), 846)
if "particle_36 geometry" not in marker_sets:
  s=new_marker_set('particle_36 geometry')
  marker_sets["particle_36 geometry"]=s
s= marker_sets["particle_36 geometry"]
mark=s.place_marker((3559.79, 5227.17, 6606.61), (1, 0.7, 0), 846)
if "particle_37 geometry" not in marker_sets:
  s=new_marker_set('particle_37 geometry')
  marker_sets["particle_37 geometry"]=s
s= marker_sets["particle_37 geometry"]
mark=s.place_marker((5913.97, 6446.47, 7072.24), (0.7, 0.7, 0.7), 846)
if "particle_38 geometry" not in marker_sets:
  s=new_marker_set('particle_38 geometry')
  marker_sets["particle_38 geometry"]=s
s= marker_sets["particle_38 geometry"]
mark=s.place_marker((5546.81, 5589.28, 5904.68), (0.7, 0.7, 0.7), 846)
if "particle_39 geometry" not in marker_sets:
  s=new_marker_set('particle_39 geometry')
  marker_sets["particle_39 geometry"]=s
s= marker_sets["particle_39 geometry"]
mark=s.place_marker((7910.33, 5966.55, 6058.86), (1, 0.7, 0), 846)
if "particle_40 geometry" not in marker_sets:
  s=new_marker_set('particle_40 geometry')
  marker_sets["particle_40 geometry"]=s
s= marker_sets["particle_40 geometry"]
mark=s.place_marker((6392.91, 4710.53, 5200.56), (0.7, 0.7, 0.7), 846)
if "particle_41 geometry" not in marker_sets:
  s=new_marker_set('particle_41 geometry')
  marker_sets["particle_41 geometry"]=s
s= marker_sets["particle_41 geometry"]
mark=s.place_marker((7709.58, 4110.71, 4640.6), (0.7, 0.7, 0.7), 846)
if "particle_42 geometry" not in marker_sets:
  s=new_marker_set('particle_42 geometry')
  marker_sets["particle_42 geometry"]=s
s= marker_sets["particle_42 geometry"]
mark=s.place_marker((7712.97, 4797.7, 4782.77), (0.7, 0.7, 0.7), 846)
if "particle_43 geometry" not in marker_sets:
  s=new_marker_set('particle_43 geometry')
  marker_sets["particle_43 geometry"]=s
s= marker_sets["particle_43 geometry"]
mark=s.place_marker((7622.35, 4411.88, 5047.9), (0.7, 0.7, 0.7), 846)
if "particle_44 geometry" not in marker_sets:
  s=new_marker_set('particle_44 geometry')
  marker_sets["particle_44 geometry"]=s
s= marker_sets["particle_44 geometry"]
mark=s.place_marker((8557.73, 5073.46, 4809.85), (0.7, 0.7, 0.7), 846)
if "particle_45 geometry" not in marker_sets:
  s=new_marker_set('particle_45 geometry')
  marker_sets["particle_45 geometry"]=s
s= marker_sets["particle_45 geometry"]
mark=s.place_marker((7952.08, 4848.52, 5275.85), (0.7, 0.7, 0.7), 846)
if "particle_46 geometry" not in marker_sets:
  s=new_marker_set('particle_46 geometry')
  marker_sets["particle_46 geometry"]=s
s= marker_sets["particle_46 geometry"]
mark=s.place_marker((8430.85, 4130.5, 4447.37), (0.7, 0.7, 0.7), 846)
if "particle_47 geometry" not in marker_sets:
  s=new_marker_set('particle_47 geometry')
  marker_sets["particle_47 geometry"]=s
s= marker_sets["particle_47 geometry"]
mark=s.place_marker((9361.43, 4118.49, 5393.68), (0.7, 0.7, 0.7), 846)
if "particle_48 geometry" not in marker_sets:
  s=new_marker_set('particle_48 geometry')
  marker_sets["particle_48 geometry"]=s
s= marker_sets["particle_48 geometry"]
mark=s.place_marker((8964.72, 3656.99, 5087.49), (0.7, 0.7, 0.7), 846)
if "particle_49 geometry" not in marker_sets:
  s=new_marker_set('particle_49 geometry')
  marker_sets["particle_49 geometry"]=s
s= marker_sets["particle_49 geometry"]
mark=s.place_marker((7453.95, 3360.79, 6236.11), (0.7, 0.7, 0.7), 846)
if "particle_50 geometry" not in marker_sets:
  s=new_marker_set('particle_50 geometry')
  marker_sets["particle_50 geometry"]=s
s= marker_sets["particle_50 geometry"]
mark=s.place_marker((7649.54, 4532.13, 4937.62), (0.7, 0.7, 0.7), 846)
if "particle_51 geometry" not in marker_sets:
  s=new_marker_set('particle_51 geometry')
  marker_sets["particle_51 geometry"]=s
s= marker_sets["particle_51 geometry"]
mark=s.place_marker((7773.78, 3614.81, 6581.55), (0, 1, 0), 846)
if "particle_52 geometry" not in marker_sets:
  s=new_marker_set('particle_52 geometry')
  marker_sets["particle_52 geometry"]=s
s= marker_sets["particle_52 geometry"]
mark=s.place_marker((7679.88, 3113.76, 3203.41), (0.7, 0.7, 0.7), 846)
if "particle_53 geometry" not in marker_sets:
  s=new_marker_set('particle_53 geometry')
  marker_sets["particle_53 geometry"]=s
s= marker_sets["particle_53 geometry"]
mark=s.place_marker((8244.16, 4228.95, 5234.34), (0.7, 0.7, 0.7), 846)
if "particle_54 geometry" not in marker_sets:
  s=new_marker_set('particle_54 geometry')
  marker_sets["particle_54 geometry"]=s
s= marker_sets["particle_54 geometry"]
mark=s.place_marker((9055.93, 4022.2, 6165.8), (0.7, 0.7, 0.7), 846)
if "particle_55 geometry" not in marker_sets:
  s=new_marker_set('particle_55 geometry')
  marker_sets["particle_55 geometry"]=s
s= marker_sets["particle_55 geometry"]
mark=s.place_marker((8021.15, 4172.61, 4831.66), (0.7, 0.7, 0.7), 846)
if "particle_56 geometry" not in marker_sets:
  s=new_marker_set('particle_56 geometry')
  marker_sets["particle_56 geometry"]=s
s= marker_sets["particle_56 geometry"]
mark=s.place_marker((6912.77, 4168.78, 5595.06), (0.7, 0.7, 0.7), 846)
if "particle_57 geometry" not in marker_sets:
  s=new_marker_set('particle_57 geometry')
  marker_sets["particle_57 geometry"]=s
s= marker_sets["particle_57 geometry"]
mark=s.place_marker((8995.03, 4017.49, 5415.5), (0.7, 0.7, 0.7), 846)
if "particle_58 geometry" not in marker_sets:
  s=new_marker_set('particle_58 geometry')
  marker_sets["particle_58 geometry"]=s
s= marker_sets["particle_58 geometry"]
mark=s.place_marker((7385.05, 3528.19, 4889.52), (0.7, 0.7, 0.7), 846)
if "particle_59 geometry" not in marker_sets:
  s=new_marker_set('particle_59 geometry')
  marker_sets["particle_59 geometry"]=s
s= marker_sets["particle_59 geometry"]
mark=s.place_marker((8245.06, 4020.59, 6516.56), (0.7, 0.7, 0.7), 846)
if "particle_60 geometry" not in marker_sets:
  s=new_marker_set('particle_60 geometry')
  marker_sets["particle_60 geometry"]=s
s= marker_sets["particle_60 geometry"]
mark=s.place_marker((9214.58, 2561.49, 6087.35), (0.7, 0.7, 0.7), 846)
if "particle_61 geometry" not in marker_sets:
  s=new_marker_set('particle_61 geometry')
  marker_sets["particle_61 geometry"]=s
s= marker_sets["particle_61 geometry"]
mark=s.place_marker((7365.48, 2406.34, 6913.57), (0, 1, 0), 846)
if "particle_62 geometry" not in marker_sets:
  s=new_marker_set('particle_62 geometry')
  marker_sets["particle_62 geometry"]=s
s= marker_sets["particle_62 geometry"]
mark=s.place_marker((5293.24, 2002.1, 7128.75), (0.7, 0.7, 0.7), 846)
if "particle_63 geometry" not in marker_sets:
  s=new_marker_set('particle_63 geometry')
  marker_sets["particle_63 geometry"]=s
s= marker_sets["particle_63 geometry"]
mark=s.place_marker((6935.36, 2024.22, 6021.96), (0.7, 0.7, 0.7), 846)
if "particle_64 geometry" not in marker_sets:
  s=new_marker_set('particle_64 geometry')
  marker_sets["particle_64 geometry"]=s
s= marker_sets["particle_64 geometry"]
mark=s.place_marker((8485.34, 2091.07, 4277.47), (0.7, 0.7, 0.7), 846)
if "particle_65 geometry" not in marker_sets:
  s=new_marker_set('particle_65 geometry')
  marker_sets["particle_65 geometry"]=s
s= marker_sets["particle_65 geometry"]
mark=s.place_marker((8115.69, 1009.72, 5865.5), (0.7, 0.7, 0.7), 846)
if "particle_66 geometry" not in marker_sets:
  s=new_marker_set('particle_66 geometry')
  marker_sets["particle_66 geometry"]=s
s= marker_sets["particle_66 geometry"]
mark=s.place_marker((8652.22, 1360.16, 4762.29), (0.7, 0.7, 0.7), 846)
if "particle_67 geometry" not in marker_sets:
  s=new_marker_set('particle_67 geometry')
  marker_sets["particle_67 geometry"]=s
s= marker_sets["particle_67 geometry"]
mark=s.place_marker((7301.48, 2098.31, 4100.52), (0.7, 0.7, 0.7), 846)
if "particle_68 geometry" not in marker_sets:
  s=new_marker_set('particle_68 geometry')
  marker_sets["particle_68 geometry"]=s
s= marker_sets["particle_68 geometry"]
mark=s.place_marker((6913.1, 144.355, 3942.63), (0.7, 0.7, 0.7), 846)
if "particle_69 geometry" not in marker_sets:
  s=new_marker_set('particle_69 geometry')
  marker_sets["particle_69 geometry"]=s
s= marker_sets["particle_69 geometry"]
mark=s.place_marker((6993.65, 1226.34, 4074.14), (0.7, 0.7, 0.7), 846)
if "particle_70 geometry" not in marker_sets:
  s=new_marker_set('particle_70 geometry')
  marker_sets["particle_70 geometry"]=s
s= marker_sets["particle_70 geometry"]
mark=s.place_marker((7967.04, -51.2111, 5103.41), (0.7, 0.7, 0.7), 846)
if "particle_71 geometry" not in marker_sets:
  s=new_marker_set('particle_71 geometry')
  marker_sets["particle_71 geometry"]=s
s= marker_sets["particle_71 geometry"]
mark=s.place_marker((6697.66, 1558.49, 4529.13), (0, 1, 0), 846)
if "particle_72 geometry" not in marker_sets:
  s=new_marker_set('particle_72 geometry')
  marker_sets["particle_72 geometry"]=s
s= marker_sets["particle_72 geometry"]
mark=s.place_marker((6768.57, 501.681, 5481.49), (0.7, 0.7, 0.7), 846)
if "particle_73 geometry" not in marker_sets:
  s=new_marker_set('particle_73 geometry')
  marker_sets["particle_73 geometry"]=s
s= marker_sets["particle_73 geometry"]
mark=s.place_marker((8091.25, 900.822, 4477.92), (0.7, 0.7, 0.7), 846)
if "particle_74 geometry" not in marker_sets:
  s=new_marker_set('particle_74 geometry')
  marker_sets["particle_74 geometry"]=s
s= marker_sets["particle_74 geometry"]
mark=s.place_marker((6329.07, 683.978, 5396.2), (0, 1, 0), 846)
for k in surf_sets.keys():
  chimera.openModels.add([surf_sets[k]])
