message: test: adjust tests expectations for new peptide alignment params formula
diff: @@ -47,8 +47,8 @@ TEST(AlignmentParams, QueryHasOnlyInternalGaps) {
  EXPECT_EQ(6, queryGapCounts.total);
  const auto alignmentParams = calculateAaAlignmentParams(queryGapCounts, refGapCounts);
  - EXPECT_EQ(5, alignmentParams.bandWidth);
  - EXPECT_EQ(2, alignmentParams.shift);
  + EXPECT_EQ(7, alignmentParams.bandWidth);
  + EXPECT_EQ(1, alignmentParams.shift);
  }
  @@ -67,8 +67,8 @@ TEST(AlignmentParams, QueryHasLeadingInternalAndTrailingGaps) {
  EXPECT_EQ(16, queryGapCounts.total);
  const auto alignmentParams = calculateAaAlignmentParams(queryGapCounts, refGapCounts);
  - EXPECT_EQ(5, alignmentParams.bandWidth);
  - EXPECT_EQ(3, alignmentParams.shift);
  + EXPECT_EQ(7, alignmentParams.bandWidth);
  + EXPECT_EQ(2, alignmentParams.shift);
  }
  @@ -87,8 +87,8 @@ TEST(AlignmentParams, QueryHasLeadingInternalAndTrailingGapsNonContiguous) {
  EXPECT_EQ(16, queryGapCounts.total);
  const auto alignmentParams = calculateAaAlignmentParams(queryGapCounts, refGapCounts);
  - EXPECT_EQ(5, alignmentParams.bandWidth);
  - EXPECT_EQ(3, alignmentParams.shift);
  + EXPECT_EQ(7, alignmentParams.bandWidth);
  + EXPECT_EQ(2, alignmentParams.shift);
  }
  @@ -113,6 +113,6 @@ TEST(AlignmentParams, GeneralCase) {
  EXPECT_EQ(16, queryGapCounts.total);
  const auto alignmentParams = calculateAaAlignmentParams(queryGapCounts, refGapCounts);
  - EXPECT_EQ(5, alignmentParams.bandWidth);
  - EXPECT_EQ(3, alignmentParams.shift);
  + EXPECT_EQ(10, alignmentParams.bandWidth);
  + EXPECT_EQ(1, alignmentParams.shift);
  }
  