Typos fixed in CHANGES.md
STAR 2.5.4a 2018/01/23
+======================
### New features:
* Implemented read group ID output as the last column of the Chimeric.out.junction file.
* Implemented --readFilesPrefix option for specifying prefix (e.g. directory path) for the file names in --readFilesIn .
-* Implemented stanard SAM attrbiute "MC" to output the mate's CIGAR. Add MC to the list of attributes in the --outSAMattribute option.
+* Implemented standard SAM attribute "MC" to output the mate's CIGAR. Add MC to the list of attributes in the --outSAMattribute option.
* Implemented the ability to input the reads from unmapped SAM/BAM file: --readFilesType SAM SE[PE] for single-end [paired-end] reads to read from the SAM file specified, as usual in --readFilesIn. For BAM files, in addition, specify --readFilesCommand samtools view -h .
* Implemented --seedSplitMin option which was previously hardcoded at 12. his will allow mapping of mates shorter than 12nt.
* Implemented --outFilterIntronStrands None option to switch off filtering by strand consistency of junctions.
@@ -11,7 +12,7 @@ STAR 2.5.4a 2018/01/23
### Bug fixes:
* Fixed a bug in chimeric detection code which sometimes led to uninitialized memory access. The chimeric output may change for a very small number of reads.
-* Fixed a problem with --alignEndsProtrude implementation which prevented output of alignments with protruded ends.
+* Fixed a problem with --alignEndsProtrude implementation which prevented the output of alignments with protruded ends.
* Fixed a bug which set non-primary bit 0x100 in the SAM FLAG for unmapped mates.
* Fixed a bug in liftOver command that output an extra field in the GTF file.
* Fixed a problem that can arise for very small genomes while using --alignIntronMax 1.
