message: skip bed comment lines
diff: #include "split.h"
  #include "Utility.h"
  #include "BedReader.h"
  +#include "Logging.h"
  #include "../intervaltree/IntervalTree.h"
  using namespace std;
  @@ -30,6 +31,9 @@ vector<BedTarget> BedReader::entries(void) {
  // coordinates used internally should be in the latter, and coordinates
  // from the user in the former should be converted immediately to the
  // internal format.
  + if (line.at(0)=='#'){
  + continue;
  + }
  vector<string> fields = split(line, " \t");
  BedTarget entry(strip(fields[0]),
  atoi(strip(fields[1]).c_str()),
  