message: First test version
diff: // /!\ Nothing else from Simplex_tree shall be included to test includes are well defined.
  #include "gudhi/FlagComplexSpMatrix.h"
  #include "gudhi/Rips_edge_list.h"
  +#include "gudhi/graph_simplicial_complex.h"
  +#include "gudhi/distance_functions.h"
  using namespace Gudhi;
  // Types definition
  using Vector_of_points = std::vector<std::vector<double>>;
  -using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
  +//using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
  using Filtration_value = double;
  -using Rips_complex = Gudhi::rips_complex::Rips_complex<Filtration_value>;
  -using Rips_edge_list = Gudhi::rips_edge_list::Rips_edge_list<Filtration_value>;
  +using Rips_edge_list = Gudhi::rips_edge_list::Rips_edge_list<double>;
  +/*using Rips_complex = Gudhi::rips_complex::Rips_complex<Filtration_value>;
  using Field_Zp = Gudhi::persistent_cohomology::Field_Zp;
  using Persistent_cohomology = Gudhi::persistent_cohomology::Persistent_cohomology<Simplex_tree, Field_Zp>;
  -using Distance_matrix = std::vector<std::vector<Filtration_value>>;
  +*/
  +using Distance_matrix = std::vector<std::vector<double>>;
  BOOST_AUTO_TEST_CASE(collapse) {
  @@ -49,9 +52,6 @@ BOOST_AUTO_TEST_CASE(collapse) {
  std::size_t number_of_points;
  std::string off_file_points;
  std::string filediag;
  - int dim_max;
  - int p;
  - double min_persistence;
  Map map_empty;
  @@ -60,14 +60,14 @@ BOOST_AUTO_TEST_CASE(collapse) {
  Vector_of_points point_vector {{0., 0.},{0., 1.},{1., 0.},{1., 1.}};
  - int dimension = point_vector[0].dimension();
  + int dimension = point_vector[0].size();
  number_of_points = point_vector.size();
  std::cout << "Successfully read " << number_of_points << " point_vector.\n";
  std::cout << "Ambient dimension is " << dimension << ".\n";
  std::cout << "Point Set Generated." << std::endl;
  - double threshold = 1.;
  + for (double threshold = 1. ; threshold <= 2.; threshold +=1.) {
  Filtered_sorted_edge_list edge_t;
  std::cout << "Computing the one-skeleton for threshold: " << threshold << std::endl;
  @@ -88,6 +88,7 @@ BOOST_AUTO_TEST_CASE(collapse) {
  std::cout << "Matrix instansiated" << std::endl;
  Filtered_sorted_edge_list collapse_edges;
  collapse_edges = mat_filt_edge_coll.filtered_edge_collapse();
  + }
  }
  