def METHOD_NAME(self):
    """Check baseml runs, generates correct output, and is the correct version."""
    ctl_file = os.path.join("PAML", "Control_files", "baseml", "baseml.ctl")
    self.bml.read_ctl_file(ctl_file)
    self.bml.alignment = os.path.join("PAML", "Alignments", "alignment.phylip")
    self.bml.tree = os.path.join("PAML", "Trees", "species.tree")
    self.bml.out_file = os.path.join("PAML", "temp.out")
    self.bml.working_dir = os.path.join("PAML", "baseml_test")
    results = self.bml.run()
    self.assertGreater(results["version"], "4.0")
    self.assertIn("parameters", results)
    self.assertEqual(len(results["parameters"]), 5)