def METHOD_NAME(get_fn):
    trj = md.load(get_fn('imatinib.mol2'))
    ref_trj = md.load(get_fn('imatinib.pdb'))
    eq(trj.xyz, ref_trj.xyz)
    ref_top, ref_bonds = ref_trj.top.to_dataframe()
    top, bonds = trj.top.to_dataframe()
    # PDB Does not have bond order, ensure that the equality fails
    try:
        eq(bonds, ref_bonds)
    except AssertionError:
        # This is what we wanted to happen, its fine
        pass
    else:
        raise AssertionError("Reference bonds with no bond order should not equal Mol2 bonds with bond order")
    # Strip bond order info since PDB does not have it
    bonds[:, -2:] = np.zeros([bonds.shape[0], 2])
    eq(bonds, ref_bonds)