diff --git a/salt/wheel/config.py b/salt/wheel/config.py
index <HASH>..<HASH> 100644
--- a/salt/wheel/config.py
+++ b/salt/wheel/config.py
@@ -25,6 +25,10 @@ def values():
 def apply(key, value):
     '''
     Set a single key 
+
+    .. note::
+
+        This will strip comments from your config file
     '''
     path = __opts__['conf_file']
     if os.path.isdir(path):
Added note about stripping comments from master config