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https://api.github.com/repos/pandas-dev/pandas/issues/1401
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4,911,554
MDU6SXNzdWU0OTExNTU0
1,401
MultiIndex groupby bugs in 0.7.3, 0.8.0b1 and 0.8.0dev
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3
"2012-06-05T16:02:02Z"
"2012-06-12T07:45:52Z"
"2012-06-11T22:14:31Z"
CONTRIBUTOR
null
``` import pandas l = [['count', 'values'], ['to filter', '']] midx = pandas.MultiIndex.from_tuples(l) df = pandas.DataFrame([[1L, 'A']], columns=midx) #one line print(df.groupby('to filter').groups) #Out: {'to filter': [0L]} #was expecting 'A': [0L] print(df.groupby([('to filter', '')]).groups) #Out: {'to filter': [0L]} #was expecting same as above df = pandas.DataFrame([[1L, 'A'], [2L, 'B']], columns=midx) #two lines, different group print(df.groupby('to filter').groups) #Out: {'A': [0L], 'B': [1L]} #fine print(df.groupby([('to filter', '')]).groups) #Out: {'': [1L], 'to filter': [0L]} #was expecting same as above df = pandas.DataFrame([[1L, 'A'], [2L, 'A']], columns=midx) #two lines, same group print(df.groupby('to filter').groups) #Out: {'A': [0L, 1L]} #fine print(df.groupby([('to filter', '')]).groups) #Out: {'': [1L], 'to filter': [0L]} #was expecting same as above ```
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4,911,635
MDU6SXNzdWU0OTExNjM1
1,402
Automatic Index type conversion from columns
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1
"2012-06-05T16:05:58Z"
"2012-06-06T04:02:48Z"
"2012-06-06T04:02:48Z"
CONTRIBUTOR
null
DataFrame.set_index and functions like pivot_table should automatically convert to DatetimeIndex if possible.
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1,403
Split time zone localization out of tz_convert into tz_localize
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1,404
Raise exception in comparisons between tz-naive and tz-aware Timestamps
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Implement Factor comparison methods
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MDU6SXNzdWU0OTE1ODQw
1,406
Raise exception if group keys and levels don't overlap in concat
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If no keys are found in the levels
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Document minimal Factor support in groupby, cut/qcut functions
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Quarterly plots place year markers under Q2 instead of Q1
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Out of bounds checking / handling in cut, qcut
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"2012-06-06T01:34:37Z"
"2012-06-12T00:28:18Z"
"2012-06-12T00:28:18Z"
MEMBER
null
currently: ``` In [5]: cut(frame.data1, [-4, -2, 0, 2, 1]) --------------------------------------------------------------------------- ValueError Traceback (most recent call last) /home/wesm/code/pandas/<ipython-input-5-dcb858d11751> in <module>() ----> 1 cut(frame.data1, [-4, -2, 0, 2, 1]) /home/wesm/code/pandas/pandas/tools/tile.pyc in cut(x, bins, right, labels, retbins, precision) 93 bins = np.asarray(bins) 94 if (np.diff(bins) < 0).any(): ---> 95 raise ValueError('bins must increase monotonically.') 96 97 return _bins_to_cuts(x, bins, right=right, labels=labels, ValueError: bins must increase monotonically. In [6]: cut(frame.data1, [-4, -2, 0, 1]) Out[6]: --------------------------------------------------------------------------- IndexError Traceback (most recent call last) /home/wesm/code/pandas/<ipython-input-6-19824849af62> in <module>() ----> 1 cut(frame.data1, [-4, -2, 0, 1]) /home/wesm/code/repos/ipython/IPython/core/displayhook.pyc in __call__(self, result) 236 self.start_displayhook() 237 self.write_output_prompt() --> 238 format_dict = self.compute_format_data(result) 239 self.write_format_data(format_dict) 240 self.update_user_ns(result) /home/wesm/code/repos/ipython/IPython/core/displayhook.pyc in compute_format_data(self, result) 148 MIME type representation of the object. 149 """ --> 150 return self.shell.display_formatter.format(result) 151 152 def write_format_data(self, format_dict): /home/wesm/code/repos/ipython/IPython/core/formatters.pyc in format(self, obj, include, exclude) 124 continue 125 try: --> 126 data = formatter(obj) 127 except: 128 # FIXME: log the exception /home/wesm/code/repos/ipython/IPython/core/formatters.pyc in __call__(self, obj) 445 type_pprinters=self.type_printers, 446 deferred_pprinters=self.deferred_printers) --> 447 printer.pretty(obj) 448 printer.flush() 449 return stream.getvalue() /home/wesm/code/repos/ipython/IPython/lib/pretty.pyc in pretty(self, obj) 352 if callable(obj_class._repr_pretty_): 353 return obj_class._repr_pretty_(obj, self, cycle) --> 354 return _default_pprint(obj, self, cycle) 355 finally: 356 self.end_group() /home/wesm/code/repos/ipython/IPython/lib/pretty.pyc in _default_pprint(obj, p, cycle) 472 if getattr(klass, '__repr__', None) not in _baseclass_reprs: 473 # A user-provided repr. --> 474 p.text(repr(obj)) 475 return 476 p.begin_group(1, '<') /home/wesm/code/pandas/pandas/core/factor.pyc in __repr__(self) 54 def __repr__(self): 55 temp = 'Factor:%s\n%s\nLevels (%d): %s' ---> 56 values = np.asarray(self) 57 return temp % ('' if self.name is None else self.name, 58 repr(values), len(self.levels), self.levels) /home/wesm/epd/lib/python2.7/site-packages/numpy/core/numeric.pyc in asarray(a, dtype, order) 233 234 """ --> 235 return array(a, dtype, copy=False, order=order) 236 237 def asanyarray(a, dtype=None, order=None): /home/wesm/code/pandas/pandas/core/factor.pyc in __array__(self, dtype) 47 48 def __array__(self, dtype=None): ---> 49 return com.take_1d(self.levels, self.labels) 50 51 def __len__(self): /home/wesm/code/pandas/pandas/core/common.pyc in take_1d(arr, indexer, out, fill_value) 235 if out is None: 236 out = np.empty(n, dtype=arr.dtype) --> 237 take_f(arr, _ensure_int64(indexer), out=out, fill_value=fill_value) 238 else: 239 out = ndtake(arr, indexer, out=out) /home/wesm/code/pandas/pandas/_algos.so in pandas._algos.take_1d_object (pandas/src/generated.c:19923)() IndexError: Out of bounds on buffer access (axis 0) ```
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4,921,712
MDExOlB1bGxSZXF1ZXN0MTUwMDQ3OA==
1,410
BUG: to_csv duplicate index values
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0
"2012-06-06T02:12:32Z"
"2014-06-18T10:04:29Z"
"2012-06-07T14:34:43Z"
CONTRIBUTOR
null
#1373
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4,921,768
MDU6SXNzdWU0OTIxNzY4
1,411
include_lowest parameter in cut function
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0
"2012-06-06T02:19:34Z"
"2012-06-14T20:17:33Z"
"2012-06-14T20:17:33Z"
MEMBER
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isin method buggy on SparseSeries
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4
"2012-06-06T10:05:35Z"
"2012-06-08T03:50:28Z"
"2012-06-08T03:50:28Z"
NONE
null
The isin method doesn't seem to work correctly for SparseSeries objects, but does work on an equivalent dense object, example code below: ``` python In [203]: pandas.__version__ Out[203]: '0.7.3' In [204]: sparse_df = DataFrame({'flag': [1., 0., 1.]}).to_sparse(fill_value=0.) In [205]: sparse_df[sparse_df.flag == 1.] Out[205]: flag 0 1 2 1 In [206]: sparse_df[sparse_df.flag.isin([1.])] Out[206]: flag 0 1 1 0 In [207]: dense_df = DataFrame({'flag': [1., 0., 1.]}) In [208]: dense_df[dense_df.flag == 1.] Out[208]: flag 0 1 2 1 In [209]: dense_df[dense_df.flag.isin([1.])] Out[209]: flag 0 1 2 1 ```
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4,927,755
MDU6SXNzdWU0OTI3NzU1
1,413
Installing dev version with pip is not supported
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13
"2012-06-06T11:58:19Z"
"2012-08-23T20:26:30Z"
"2012-06-07T06:44:13Z"
NONE
null
I've tried to install the dev version with `pip`, but it did not work. I had to manually download the tarball and run `python setup.py install`, which breaks a 100% pip setup of my local environment. The following did not work: ``` pip install -e git+git://github.com/pydata/pandas.git#egg=pandas ``` It also did not work with the v0.8.0b1 version: ``` pip install -e git+git://github.com/pydata/[email protected]#egg=pandas ```
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MDU6SXNzdWU0OTI3OTU0
1,414
Series apply() and map() may produce a Series with different dtype than the original
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8
"2012-06-06T12:12:47Z"
"2012-06-11T18:28:11Z"
"2012-06-11T18:27:53Z"
CONTRIBUTOR
null
I'm unsure if it's by design or not, so I'm leaving this here. ``` python In [84]: original = pandas.Series([1,2,3, np.nan], dtype="object") In [85]: def convert(value): return np.nan if pandas.isnull(value) else int(value) ....: In [86]: original.apply(convert).dtype Out[86]: dtype('float64') ```
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4,933,939
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1,415
Use index name as xlabel or ylabel in plot types
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"2012-06-06T17:33:06Z"
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1,416
Add any / all methods for boolean DataFrame
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1,417
Add pandas to Travis CI
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2
"2012-06-06T21:21:54Z"
"2012-06-07T16:26:26Z"
"2012-06-07T15:40:13Z"
CONTRIBUTOR
null
Now that I've added a `.travis.yml` in #1382, about 2 minutes of book-keeping is required to register pandas on Travis CI. See http://about.travis-ci.org/docs/user/getting-started/
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4,941,229
MDU6SXNzdWU0OTQxMjI5
1,418
Enable pass through *args, **kwargs to function in GroupBy
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"2012-06-06T23:48:03Z"
"2012-06-07T16:35:26Z"
"2012-06-07T16:35:24Z"
NONE
null
Similar to: https://github.com/pydata/pandas/issues/376
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Allow concat names arg to rename existing MultiIndex level.
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1
"2012-06-07T08:28:10Z"
"2012-06-12T00:05:20Z"
"2012-06-12T00:03:12Z"
CONTRIBUTOR
null
``` python In [67]: a = pandas.DataFrame(np.random.rand(3,3), ....: columns=list('ABC'), ....: index=pandas.Index(list('abc'), name='index_a')) In [68]: b = pandas.DataFrame(np.random.rand(3,3), ....: columns=list('ABC'), ....: index=pandas.Index(list('abc'), name='index_b')) In [69]: a Out[69]: A B C index_a a 0.734551 0.364354 0.989970 b 0.356027 0.625983 0.855296 c 0.895759 0.144406 0.068718 In [70]: b Out[70]: A B C index_b a 0.130305 0.981312 0.541476 b 0.046006 0.369983 0.822214 c 0.621787 0.047847 0.420459 In [71]: c = pandas.concat([a, b], keys=['key0', 'key1'], names=['lvl0']) In [72]: c Out[72]: A B C lvl0 index_a key0 a 0.734551 0.364354 0.989970 b 0.356027 0.625983 0.855296 c 0.895759 0.144406 0.068718 key1 a 0.130305 0.981312 0.541476 b 0.046006 0.369983 0.822214 c 0.621787 0.047847 0.420459 In [73]: c = pandas.concat([a, b], keys=['key0', 'key1'], names=['lvl0', 'lvl1']) --------------------------------------------------------------------------- AssertionError Traceback (most recent call last) ... AssertionError: ```
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DOC: Indicate that to_csv and from_csv methods can handle string file pa...
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1
"2012-06-07T14:00:07Z"
"2012-06-07T14:47:14Z"
"2012-06-07T14:34:31Z"
CONTRIBUTOR
null
...th and file-like objects for io. It also seems a good idea to align the argument names: _path_, _path_or_buffer_, _filepath_or_buffer_ are all three used among `to_csv()`, `from_csv()`, `read_table()` to indicate the same. I did not touch those since that is an api change.
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Missing rows on DataFrame outer join with MultiIndex
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0
"2012-06-07T17:01:36Z"
"2012-06-11T21:07:40Z"
"2012-06-11T21:07:40Z"
NONE
null
Hi, I'm trying to compute an outer join on several columns applied to several DataFrame objects in one step. However, the result I get seems to force the uniqueness on the set of join columns and, as a consequence, some rows are missing. Here is some example code that shows the output from a join operation over 3 dataframes in one step and a merge operation (in 2 steps) over the same data. Comparing both, we see that the join operation doesn't include the row "1 1 10 100 1000". ``` from pandas import DataFrame, merge def multiple_join(): df1 = DataFrame({"a": [1,1], "b": [1,1], "c": [10,20]}) df2 = DataFrame({"a": [1,1], "b": [1,2], "d": [100,200]}) df3 = DataFrame({"a": [1,1], "b": [1,2], "e": [1000,2000]}) df1.set_index(["a", "b"], inplace=True) df2.set_index(["a", "b"], inplace=True) df3.set_index(["a", "b"], inplace=True) df_joined = df1.join([df2, df3], how='outer') return df_joined def cascade_merge(): df1 = DataFrame({"a": [1,1], "b": [1,1], "c": [10,20]}) df2 = DataFrame({"a": [1,1], "b": [1,2], "d": [100,200]}) df3 = DataFrame({"a": [1,1], "b": [1,2], "e": [1000,2000]}) df_partially_merged = merge(df1, df2, on=['a', 'b'], how='outer') df_merged = merge(df_partially_merged, df3, on=['a', 'b'], how='outer') return df_merged if __name__ == "__main__": print multiple_join() print cascade_merge() # c d e # a b # 1 1 20 100 1000 # 2 NaN 200 2000 # # a b c d e # 0 1 1 10 100 1000 # 1 1 1 20 100 1000 # 2 1 2 NaN 200 2000 ``` However, this problem doesn't seem to arise when we specify "how={anything other that outer}" in the join operation. So, either this is a bug or I'm missing something here. In either case, I would appreciate any comment regarding this issue. And, BTW, it would be really could if "merge" could accept a list of DataFrames and join them efficiently in one step. Thanks and regards.
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Joins between equal, but not same time zone DatetimeIndex yields non-UTC DatetimeIndex
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select() within a function closure not working as agg function
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2
"2012-06-07T22:50:52Z"
"2012-06-11T21:03:10Z"
"2012-06-11T18:54:21Z"
CONTRIBUTOR
null
I'm running into a weird issue with groupby and function closure. For some reason the function closure doesn't work unless I access the grouped series. You can see in agg_before I have a fix flag that will just access the data var. ``` python from pandas import * import numpy as np periods = 1000 ind = DatetimeIndex(start='2012/1/1', freq='5min', periods=periods) df = DataFrame({'high': np.arange(periods), 'low': np.arange(periods)}, index=ind) def agg_before(hour, func, fix=False): """ Run an aggregate func on the subset of data. """ def _func(data): d = data.select(lambda x: x.hour < 11).dropna() if fix: data[data.index[0]] if len(d) == 0: return None return func(d) return _func def afunc(data): d = data.select(lambda x: x.hour < 11).dropna() return np.max(d) grouped = df.groupby(lambda x: datetime(x.year, x.month, x.day)) closure_bad = grouped.agg({'high': agg_before(11, np.max)}) closure_good = grouped.agg({'high': agg_before(11, np.max, True)}) lambda_good = grouped.agg({'high': afunc}) ``` ``` In [33]: np.__version__ Out[39]: '1.6.2' In [34]: pandas.__version__ Out[34]: '0.8.0.dev-dc6ce90' In [35]: closure_bad Out[35]: high 2012-01-01 131 2012-01-02 NaN 2012-01-03 NaN 2012-01-04 NaN In [36]: closure_good Out[36]: high 2012-01-01 131 2012-01-02 419 2012-01-03 707 2012-01-04 995 In [37]: lambda_good Out[37]: high 2012-01-01 131 2012-01-02 419 2012-01-03 707 2012-01-04 995 ``` Running an agg function that isn't a closure works fine. Any ideas on this?
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Limit argument not respected in `resample`
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"2012-06-07T23:18:57Z"
"2012-06-08T01:00:40Z"
"2012-06-08T01:00:40Z"
MEMBER
null
``` In [5]: rng = date_range('1/1/2000', periods=3, freq='5t') In [6]: ts = Series(np.random.randn(len(rng)), rng) In [7]: ts.resample('t', fill_method='ffill', limit=2) Out[7]: 2000-01-01 00:00:00 0.204905 2000-01-01 00:01:00 0.204905 2000-01-01 00:02:00 0.204905 2000-01-01 00:03:00 0.204905 2000-01-01 00:04:00 0.204905 2000-01-01 00:05:00 0.804447 2000-01-01 00:06:00 0.804447 2000-01-01 00:07:00 0.804447 2000-01-01 00:08:00 0.804447 2000-01-01 00:09:00 0.804447 2000-01-01 00:10:00 -0.602923 Freq: T ```
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1,425
Autocorrelation plot
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5
"2012-06-07T23:27:29Z"
"2014-06-15T07:05:12Z"
"2012-06-11T18:12:16Z"
CONTRIBUTOR
null
http://pandasplotting.blogspot.com/2012/06/autocorrelation-plot.html
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MDU6SXNzdWU0OTYyMjg3
1,426
Raise exception on joins between tz-naive DatetimeIndex and tz-aware ones
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"2012-06-08T00:17:44Z"
"2012-06-11T17:00:19Z"
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1,427
Setting xlim with strings in irregular time series plot
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"2012-06-08T02:09:11Z"
"2012-06-08T14:42:38Z"
"2012-06-08T14:42:38Z"
MEMBER
null
Works with tsplot, but not irregular plot
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ENH: set_xlim using str for irregular index
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"2012-06-08T03:31:57Z"
"2013-12-04T00:47:36Z"
"2012-06-08T14:42:28Z"
CONTRIBUTOR
null
#1427
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DataFrame.any/all
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2
"2012-06-08T04:18:58Z"
"2014-07-06T05:59:15Z"
"2012-06-10T23:17:17Z"
CONTRIBUTOR
null
raises Exception if mixed or non-boolean #1416
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4,971,064
MDU6SXNzdWU0OTcxMDY0
1,430
timeseries related .groups bug
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0
"2012-06-08T13:57:30Z"
"2013-12-04T00:58:08Z"
"2012-06-08T21:19:26Z"
CONTRIBUTOR
null
related to #1423 ``` from pandas import * import numpy as np periods = 1000 ind = DatetimeIndex(start='2012/1/1', freq='5min', periods=periods) df = DataFrame({'high': np.arange(periods), 'low': np.arange(periods)}, index=ind) grouped = df.groupby(lambda x: datetime(x.year, x.month, x.day)) In [9]: grouped.groups ValueError Traceback (most recent call last) <ipython-input-9-aec229cf123a> in <module>() ----> 1 grouped.groups ~/pandas/pandas/core/groupby.pyc in groups(self) 150 @property 151 def groups(self): --> 152 return self.grouper.groups 153 154 @property ~/pandas/pandas/core/index.pyc in groupby(self, to_groupby) 740 741 def groupby(self, to_groupby): --> 742 return self._groupby(self.values, to_groupby) 743 744 def map(self, mapper): ... ... ... ~/pandas/pandas/lib.so in pandas.lib.groupby_arrays (pandas/src/tseries.c:67246)() ValueError: Buffer dtype mismatch, expected 'int64_t' but got Python object ```
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https://api.github.com/repos/pandas-dev/pandas/issues/1431
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4,971,664
MDU6SXNzdWU0OTcxNjY0
1,431
Selecting columns via df[:, column_list] broken
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2
"2012-06-08T14:29:04Z"
"2012-06-08T14:43:02Z"
"2012-06-08T14:40:33Z"
NONE
null
happened with latest pandas. ``` from pandas import * x = DataFrame([(0,1),(2,3)], columns = ['a','b']) x[:,['a']] --------------------------------------------------------------------------- TypeError Traceback (most recent call last) <ipython-input-4-2277db18002c> in <module>() 1 from pandas import * 2 x = DataFrame([(0,1),(2,3)], columns = ['a','b']) ----> 3 x[:,['a']] /usr/local/lib/python2.7/dist-packages/pandas-0.8.0.dev_ed7a3d2-py2.7-linux-x86_64.egg/pandas/core/frame.pyc in __getitem__(self, key) 1679 raise ValueError('Cannot index using non-boolean DataFrame') 1680 else: -> 1681 return self._get_item_cache(key) 1682 1683 def _getitem_array(self, key): /usr/local/lib/python2.7/dist-packages/pandas-0.8.0.dev_ed7a3d2-py2.7-linux-x86_64.egg/pandas/core/generic.pyc in _get_item_cache(self, item) 471 return cache[item] 472 except Exception: --> 473 values = self._data.get(item) 474 res = self._box_item_values(item, values) 475 cache[item] = res /usr/local/lib/python2.7/dist-packages/pandas-0.8.0.dev_ed7a3d2-py2.7-linux-x86_64.egg/pandas/core/internals.pyc in get(self, item) 783 784 def get(self, item): --> 785 _, block = self._find_block(item) 786 return block.get(item) 787 /usr/local/lib/python2.7/dist-packages/pandas-0.8.0.dev_ed7a3d2-py2.7-linux-x86_64.egg/pandas/core/internals.pyc in _find_block(self, item) 892 893 def _find_block(self, item): --> 894 self._check_have(item) 895 for i, block in enumerate(self.blocks): 896 if item in block: /usr/local/lib/python2.7/dist-packages/pandas-0.8.0.dev_ed7a3d2-py2.7-linux-x86_64.egg/pandas/core/internals.pyc in _check_have(self, item) 898 899 def _check_have(self, item): --> 900 if item not in self.items: 901 raise KeyError('no item named %s' % str(item)) 902 /usr/local/lib/python2.7/dist-packages/pandas-0.8.0.dev_ed7a3d2-py2.7-linux-x86_64.egg/pandas/core/index.pyc in __contains__(self, key) 276 277 def __contains__(self, key): --> 278 hash(key) 279 # work around some kind of odd cython bug 280 try: TypeError: unhashable type ```
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MDU6SXNzdWU0OTcyODI1
1,432
DataFrame.ix assign fails for mixed dtypes
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1
"2012-06-08T15:28:58Z"
"2012-06-11T16:55:22Z"
"2012-06-11T16:55:14Z"
CONTRIBUTOR
null
from [mailing list](http://groups.google.com/group/pydata/browse_thread/thread/43c1bc3a314a9bb3#) ``` python data = pandas.DataFrame.from_dict({1: [1.,2.,3.], 2: [3,4,5]}) print data.dtypes data.ix[1] = [10., 20] # fails ```
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4,972,912
MDU6SXNzdWU0OTcyOTEy
1,433
Unexpected behaviour when converting datetime column to np.datetime64
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1
"2012-06-08T15:34:05Z"
"2012-06-14T03:04:56Z"
"2012-06-14T03:04:37Z"
NONE
null
To me this behaviour appeared to be weird. Numpy 1.7 and latest Pandas ``` from pandas import * from datetime import datetime x = DataFrame([datetime.now(), datetime.now()]) print x[0].dtype print to_datetime(x[0]).dtype x[0] = to_datetime(x[0]) print x[0].dtype, "shouldn't this be datetime64?" x[1] = to_datetime(x[0]) print x[1].dtype, "this is" object datetime64[ns] object shouldn't this be datetime64? datetime64[ns] this is ```
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4,976,160
MDU6SXNzdWU0OTc2MTYw
1,434
On main website: url to vbench is wrong
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1
"2012-06-08T18:37:59Z"
"2012-06-08T20:34:51Z"
"2012-06-08T20:34:51Z"
NONE
null
Hello, In "RELATED TOOLS" (right column, bottom), the link to vbench is https://github.com/wesm/vbench (404) while it should be https://github.com/pydata/vbench. (Didn't found the github repository of the main website to send a pull request). Have a nice day,
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4,976,877
MDU6SXNzdWU0OTc2ODc3
1,435
Inconsistent results using custom function though resample & how
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2
"2012-06-08T19:17:39Z"
"2012-06-14T03:08:38Z"
"2012-06-14T03:08:38Z"
NONE
null
I have noticed some inconsistent results between using resample & how calling a defined function. It might be I have misunderstood how this is meant to function. Here's some code to illustrate it: ``` import numpy as np import pandas from datetime import * start = datetime(2010,6,1) end = datetime(2012,1,1) rng = pandas.date_range(start, end, freq='BM') ts = pandas.Series(np.random.randn(len(rng)), index=rng) def testfunction1(data): return np.sum(data) / len(data) def testfunction2(data): return np.mean(data) / np.std(data) t1 = ts.resample('Q', how=testfunction1) t0 = ts.resample('Q', how=np.mean) t2 = ts.resample('Q', how=np.sum) t3 = ts.resample('Q', how=len) # Compare defined function with numpy function t1 == t0 # Everything is True # Compare defined function (t1) with explicit calculation on timeseries t2/t3 == t1 # Everything is True # Apply second function involving mean/std d0 = ts.resample('Q', how=testfunction2) d1 = ts.resample('Q', how=np.mean) d2 = ts.resample('Q', how=np.std) # Compare defined function with explicit calculation on timeseries d1/d2 == d0 # Everything is False ```
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4,977,665
MDU6SXNzdWU0OTc3NjY1
1,436
bug in DataFrame.plot()
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5
"2012-06-08T20:04:41Z"
"2012-06-08T22:32:58Z"
"2012-06-08T22:32:58Z"
NONE
null
I seem to run into a bug in pandas 0.8 with plot(). This is the sequence of commands, the external file that is read can be send to reproduce the exception. import pandas s1=pandas.read_table('DATA_serie1.TXT') dr = pandas.date_range(start='2012-01-01', periods=1500, freq='30Min') s1.index=dr s1.plot() This is the exception trace: ## In [13]: s1.plot() Traceback (most recent call last): File "<ipython console>", line 1, in <module> File "C:\Python27\lib\site-packages\pandas\tools\plotting.py", line 693, in plot_frame plot_obj.generate() File "C:\Python27\lib\site-packages\pandas\tools\plotting.py", line 241, in generate self._make_plot() File "C:\Python27\lib\site-packages\pandas\tools\plotting.py", line 431, in _make_plot self._make_ts_plot(data) File "C:\Python27\lib\site-packages\pandas\tools\plotting.py", line 492, in _make_ts_plot tsplot(data[col], plotf, ax=ax, label=label, *_kwargs) File "C:\Python27\lib\site-packages\pandas\tseries\plotting.py", line 111, in tsplot plotted = plotf(ax, *args, *_kwargs) File "C:\Python27\lib\site-packages\matplotlib\axes.py", line 3783, in plot for line in self._get_lines(_args, *_kwargs): File "C:\Python27\lib\site-packages\matplotlib\axes.py", line 317, in _grab_next_args for seg in self._plot_args(remaining, kwargs): File "C:\Python27\lib\site-packages\matplotlib\axes.py", line 294, in _plot_args x, y = self._xy_from_xy(x, y) File "C:\Python27\lib\site-packages\matplotlib\axes.py", line 210, in _xy_from_xy bx = self.axes.xaxis.update_units(x) File "C:\Python27\lib\site-packages\matplotlib\axis.py", line 1256, in update_units converter = munits.registry.get_converter(data) File "C:\Python27\lib\site-packages\matplotlib\units.py", line 132, in get_converter for thisx in x: File "C:\Python27\lib\site-packages\pandas\tseries\period.py", line 687, in __iter__ yield Period(ordinal=val, freq=self.freq) File "C:\Python27\lib\site-packages\pandas\tseries\period.py", line 138, in **init** raise ValueError('Only mult == 1 supported') ValueError: Only mult == 1 supported I will send the file to wes on his personal e-mail address, unless I can add it to this issue somehow? thanks, roel
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4,980,238
MDU6SXNzdWU0OTgwMjM4
1,437
datetimeindex returns wrong datetimes with tolist() and values()
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2
"2012-06-08T22:34:54Z"
"2012-06-11T16:31:10Z"
"2012-06-11T16:30:50Z"
NONE
null
In [82]: dr = pandas.date_range(start='2012-01-01', periods=10, freq='30Min') In [83]: dr Out[83]: <class 'pandas.tseries.index.DatetimeIndex'> [2012-01-01 00:00:00, ..., 2012-01-01 04:30:00] Length: 10, Freq: 30T, Timezone: None In [84]: dr.values Out[84]: array([1970-01-16 224:00:00, 1970-01-16 224:30:00, 1970-01-16 225:00:00, 1970-01-16 225:30:00, 1970-01-16 226:00:00, 1970-01-16 226:30:00, 1970-01-16 227:00:00, 1970-01-16 227:30:00, 1970-01-16 228:00:00, 1970-01-16 228:30:00], dtype=datetime64[ns])
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4,981,307
MDU6SXNzdWU0OTgxMzA3
1,438
Check periods is number in DatetimeIndex/PeriodIndex constructor
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0
"2012-06-09T00:18:52Z"
"2012-06-09T00:29:51Z"
"2012-06-09T00:29:51Z"
CONTRIBUTOR
null
In case users forget 3rd argument is periods and not freq. e.g., date_range('2011/1/1', '2012/1/1', 'B') raises MemoryError
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Negative indexes does not work as in Python/Numpy (as one would expect)
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"2012-06-09T05:52:48Z"
"2012-06-09T16:42:36Z"
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Could not find a reference for this anywhere, so I'm sorry if already covered in the docs or in another issue. ``` $ python Python 2.6.6 (r266:84292, Dec 27 2010, 00:02:40) [GCC 4.4.5] on linux2 Type "help", "copyright", "credits" or "license" for more information. >>> a = [1,2,3,4,5] >>> a[-1] 5 >>> import numpy >>> npa = numpy.array([1,2,3,4,5]) >>> npa[-1] 5 >>> import pandas >>> s = pandas.Series([1,2,3,4,5]) >>> s[-1] Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/usr/local/lib/python2.6/dist-packages/pandas-0.7.2-py2.6-linux-i686.egg/pandas/core/series.py", line 376, in __getitem__ return self.index.get_value(self, key) File "/usr/local/lib/python2.6/dist-packages/pandas-0.7.2-py2.6-linux-i686.egg/pandas/core/index.py", line 516, in get_value return self._engine.get_value(series, key) File "engines.pyx", line 21, in pandas._engines.IndexEngine.get_value (pandas/src/engines.c:1558) File "engines.pyx", line 29, in pandas._engines.IndexEngine.get_value (pandas/src/engines.c:1437) File "engines.pyx", line 101, in pandas._engines.DictIndexEngine.get_loc (pandas/src/engines.c:2664) File "engines.pyx", line 108, in pandas._engines.DictIndexEngine.get_loc (pandas/src/engines.c:2616) KeyError: -1 >>> ``` Notice that if indexes aren't numeric, everything work as expected: ``` >>> s = pandas.Series([1,2,3,4,5],index=['a','b','c','d','e']) >>> s[-1] 5 ``` Is this a bug or "by design"?
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Lag plot
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1,441
Add dependency on pytz
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Segmentation fault on reading a CSV file (Ubuntu linux)
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"2012-06-10T01:36:06Z"
"2013-12-04T00:43:13Z"
"2012-06-10T01:58:16Z"
NONE
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I am running a fresh instance of ubuntu created from the starcluster amazon machine image ami-0af31963 on EC2. I install pandas from pip. Then I executed the following commands resulting in the seg fault. The offending csv file is this: https://dl.dropbox.com/u/1758/test.csv > > root@master:~/project/data# python > > Python 2.6.5 (r265:79063, Apr 16 2010, 13:57:41) > > [GCC 4.4.3] on linux2 > > Type "help", "copyright", "credits" or "license" for more information. > > > > > from pandas import \* > > > df = read_csv('test.csv', index_col=0) > > > /usr/local/lib/python2.6/dist-packages/pandas/io/parsers.py:698: RuntimeWarning: tp_compare didn't return -1 or -2 for exception > > > result = lib.maybe_convert_numeric(values, na_values) > > > Segmentation fault Let me know if you can reproduce this or if I can give any additional information. ( I am able to run it without problem on OSX 10.7.4. )
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Retry yahoo DataReader on 404 up to 3 times
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CONTRIBUTOR
null
This should fix bug #826 that had yahoo randomly failing downloads.
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Close SQL cursors before committing a connection.
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"2012-06-11T17:45:35Z"
NONE
null
Cursor must always be closed before committing a connection (http://stackoverflow.com/questions/9173073/python-mysql-mysqldb-testing-the-insert-function-its-not-adding-rows), otherwise some DB client libraries will complain (specifically, MySQLdb).
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5,005,981
MDExOlB1bGxSZXF1ZXN0MTUzNjI3Nw==
1,445
BUG: ujson fix sniffing of dtype when decoding
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0
"2012-06-11T15:38:49Z"
"2012-06-11T17:59:16Z"
"2012-06-11T17:59:16Z"
CONTRIBUTOR
null
ujson was never auto-sniffing the dtype because `PyArray_DescrConverter` converts `None` to the numpy default dtype. It should instead use `PyArray_DescrConverter2` which converts `None` to `NULL`. The rest of the changes are to fix tests related to this "new" behaviour. Tested with Python 2.7 on 64 bit OSX, 32 bit Ubuntu and 32 bit WinXP with Mingw32 and MSVC. EPD is still seg faulting.
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1,446
Reenable py31 and py32
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0
"2012-06-11T23:15:14Z"
"2012-06-12T03:16:21Z"
"2012-06-12T03:16:21Z"
CONTRIBUTOR
null
Here is a Travis run that was successful for Python 2.6, 2.7, 3.1, and 3.2: http://travis-ci.org/#!/msabramo/pandas/builds/1596467
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1,447
Update time zone handling documentation
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"2012-06-12T00:42:29Z"
"2012-06-12T01:40:28Z"
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MEMBER
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1,448
Common interface to DataFrame
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25
"2012-06-12T03:33:45Z"
"2014-02-18T19:51:18Z"
"2014-02-18T19:51:18Z"
CONTRIBUTOR
null
Wouldn't it be nice to have a common minimal interface for pandas' DataFrame and rpy2.robjects.vectors.DataFrame ? This would allow duck typing and make the use of such structures across pandas and R as seamless as possible. This might be at the expense of performances in cases where conversion are made behind the scene but the general is to make a first implementation easy for a developper, and optimization made later whenever needed.
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1,449
Allow to_dict to return lists and Series
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1
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"2012-06-14T02:40:38Z"
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CONTRIBUTOR
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5,034,071
MDU6SXNzdWU1MDM0MDcx
1,450
Add option to disable empty string -> NA in file readers
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"2012-06-12T21:32:59Z"
"2017-05-07T14:58:15Z"
"2012-06-25T22:34:53Z"
MEMBER
null
http://stackoverflow.com/questions/10867028/get-pandas-read-csv-to-read-empty-values-as-empty-string-instead-of-nan
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5,034,443
MDU6SXNzdWU1MDM0NDQz
1,451
Monthly resampling bug encountered at PyGotham
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"2012-06-14T16:47:57Z"
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To reproduce: ``` from pandas import * dates = date_range('4/16/2012 20:00', periods=5000, freq='h') ts = Series(randn(len(dates)), index=dates) ts.resample('M') ```
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MDU6SXNzdWU1MDM0NzY0
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JSON construct datetime64 views, not copies
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"2013-09-23T00:24:04Z"
"2013-09-23T00:24:04Z"
MEMBER
null
cf C code `dtype = PyArray_DescrFromType(NPY_INT64); new_obj = PyArray_View(obj, dtype, NULL); Py_DECREF(dtype); if (new_obj == NULL) { ... }`
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1,453
Change Factor to Categorical or Enum or something
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DOC: Add regex to parser docs for sep.
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"2012-06-13T00:34:02Z"
"2012-06-14T02:36:48Z"
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MDU6SXNzdWU1MDM4MzU0
1,455
SeriesGroupBy.count() errors when original series is MultiIndex with Datetime as level 0
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1
"2012-06-13T00:46:11Z"
"2012-06-14T14:49:05Z"
"2012-06-14T14:48:58Z"
CONTRIBUTOR
null
``` python from pandas import * dr = date_range(start='1/1/2012', freq='5min', periods=10) # BAD Example, datetimes first labels = zip(dr, range(10)) s = Series(np.arange(10), index=MultiIndex.from_tuples(labels, names=['a','b'])) grouped = s.groupby(lambda x: x[1] % 2 == 0) grouped.count() # DateParseError: Could not parse COUNT # Works fine labels = zip(range(10), dr) s = Series(np.arange(10), index=MultiIndex.from_tuples(labels, names=['a','b'])) grouped = s.groupby(lambda x: x[0] % 2 == 0) grouped.count() # False 5 # True 5 ``` Seems to have happened within the last few days, maybe even just today.
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1,456
Add parentheses to a print statement so it compiles under Python 3
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3
"2012-06-13T01:41:43Z"
"2012-06-14T03:07:15Z"
"2012-06-14T02:38:45Z"
CONTRIBUTOR
null
Just fixing a Python 2-style print statement in docs/make.py so it'll compile under Python 3. (Untested but I can't imagine how this would break anything)
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1,457
Factor with -1 in labels, testing
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Resampling issue described in stackoverflow
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http://stackoverflow.com/questions/11018120/bug-in-resampling-with-pandas-0-8
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Resample bug after converting tz
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4
"2012-06-13T19:42:48Z"
"2014-12-20T23:39:38Z"
"2012-06-14T02:50:37Z"
NONE
null
``` dr = date_range(start='2012-4-13', end='2012-5-1') ts = Series(range(len(dr)), dr) ts_utc = ts.tz_convert('UTC') ts_local = ts_utc.tz_convert('America/Los_Angeles') ts_local.resample('W') ``` yields ``` traceback ~/env/lib/python2.7/site-packages/pandas/tseries/resample.pyc in _get_time_bins(self, axis) 107 108 # general version, knowing nothing about relative frequencies --> 109 bins = lib.generate_bins_dt64(axis.asi8, binner.asi8, self.closed) 110 111 if self.label == 'right': ~/env/lib/python2.7/site-packages/pandas/lib.so in pandas.lib.generate_bins_dt64 (pandas/src/tseries.c:60938)() ValueError: Values falls before first bin ```
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5,058,121
MDU6SXNzdWU1MDU4MTIx
1,460
labels argument to cut not exactly what's desired
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0
"2012-06-13T21:47:32Z"
"2012-06-13T22:23:18Z"
"2012-06-13T22:23:18Z"
MEMBER
null
If pass `len(bins) - 1` labels, should use those without forming intervals
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5,058,144
MDU6SXNzdWU1MDU4MTQ0
1,461
Enable / test assigning to categorical / factor levels
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0
"2012-06-13T21:48:19Z"
"2012-06-13T22:23:26Z"
"2012-06-13T22:23:26Z"
MEMBER
null
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5,058,434
MDU6SXNzdWU1MDU4NDM0
1,462
Improve cut handling of integer arrays
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0
"2012-06-13T22:03:55Z"
"2012-06-14T20:18:11Z"
"2012-06-14T20:18:11Z"
MEMBER
null
See R
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5,058,449
MDU6SXNzdWU1MDU4NDQ5
1,463
Return NA in Categorical for out of range values
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0
"2012-06-13T22:04:38Z"
"2012-06-14T19:36:29Z"
"2012-06-14T19:36:29Z"
MEMBER
null
See R's behavior
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5,059,569
MDU6SXNzdWU1MDU5NTY5
1,464
Resample bug with sparse indexes. Incorrectly assumes upsample
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2
"2012-06-13T23:21:03Z"
"2012-06-14T02:36:24Z"
"2012-06-14T02:36:24Z"
CONTRIBUTOR
null
``` python from pandas import * dr = date_range(start='1/1/2012', freq='5min', periods=1000) s = Series(np.array(100), index=dr) # subset the data. s = s[s.index.hour < 7] # len(s) is now 336 s.resample('10min', how=lambda x: len(x)) # Wrong, thinks we're upsampling #2012-01-01 00:00:00 100 #2012-01-01 00:15:00 100 #2012-01-01 00:30:00 100 #2012-01-01 00:45:00 100 #2012-01-01 01:00:00 100 # 30min index has less labels. s.resample('30min', how=lambda x: len(x)) # Right #2012-01-01 00:00:00 1 #2012-01-01 00:30:00 6 #2012-01-01 01:00:00 6 #2012-01-01 01:30:00 6 #2012-01-01 02:00:00 6 ``` What's going on here is that resample tests whether you are down/up sampling by the len of label arrays. If your source data is ordered but sparse, the resampling will sometimes assume you're up-sampling when you're not. I run into this with intraday finance data since mine is restricted to trading hours.
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1,465
resample error with closed='left' and label='right'.
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1
"2012-06-14T01:40:20Z"
"2013-12-04T00:43:13Z"
"2012-06-14T03:38:05Z"
CONTRIBUTOR
null
``` python from pandas import * # ERROR s = Series(0, index=date_range(start='1/1/2012 9:30', freq='1min', periods=21)) s.resample('10min', how='mean',closed='left', label='right') # Works. Only changed the start time. s = Series(0, index=date_range(start='1/1/2012 9:31', freq='1min', periods=21)) s.resample('10min', how='mean',closed='left', label='right') ``` Happens whenever the binlabels are trimmed and the label is set to 'right'. It ends up reducing the labels twice.
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5,061,799
MDU6SXNzdWU1MDYxNzk5
1,466
Treatment of gaps in timeseries plots
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3
"2012-06-14T02:58:52Z"
"2012-06-19T17:20:00Z"
"2012-06-19T17:20:00Z"
CONTRIBUTOR
null
add option to drop parts of the xaxis without data from mailing list: Hi, I am having difficulty sorting out how to do any intra-day plot of time series data in matplotlib or pandas. I have looked through the documentation and also purchased the Python_for_Data_Analysis ebook but it does not seem covered in either. There are many references to daily samplings. I can produce images by using the DataFrame.plot or Series.plot function. This results in a well laid out plot, except for the hours outside of my timeseries (in the example of exchange hours for financial data) are included in the axis and interpolated. If I give it the criteria use_index=False, the plot looks as I would expect but I look my Timestamp index and it becomes an integer index as I would receive if I used matplotlib/pyplot. I am looking for direction on this and to recommend an inclusion of this topic in either the references and documentation. Pandas is great and I love learning and working with it.
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Refactor MultiIndex to not always store tuples. Benchmark, ensure legacy pickle support
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"2012-06-14T03:11:42Z"
"2012-06-14T22:58:10Z"
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MEMBER
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factor.py -> categorical.py (or something)
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"2012-06-14T03:14:32Z"
"2012-06-14T19:14:33Z"
"2012-06-14T19:14:33Z"
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5,069,862
MDU6SXNzdWU1MDY5ODYy
1,469
qcut returning confusing first bin with all positive integer series
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2
"2012-06-14T13:32:21Z"
"2012-06-14T20:19:32Z"
"2012-06-14T20:19:32Z"
NONE
null
bins[0] -= 0.001 \* (x.max() - x.min()) should probably be tuned - especially for integers maybe related to issue #1462 qcut(Series([0,1,2,3,4,5,3531132324355])) Factor: array([(-3531132324.355, 1.5], (-3531132324.355, 1.5], (1.5, 3], (1.5, 3], (3, 4.5], (4.5, 3531132324355], (4.5, 3531132324355]], dtype=object) Levels (4): array([(-3531132324.355, 1.5], (1.5, 3], (3, 4.5], (4.5, 3531132324355]], dtype=object) qcut(Series([0,1,2,3,4,5,3535)) Factor: array([(-3.535, 1.5], (-3.535, 1.5], (1.5, 3], (1.5, 3], (3, 4.5], (4.5, 3535], (4.5, 3535]], dtype=object) Levels (4): array([(-3.535, 1.5], (1.5, 3], (3, 4.5], (4.5, 3535]], dtype=object)
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5,072,164
MDU6SXNzdWU1MDcyMTY0
1,470
makeQuantiles accesses remove_na which is not defined
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1
"2012-06-14T14:55:06Z"
"2012-06-14T15:01:15Z"
"2012-06-14T15:01:15Z"
NONE
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5,074,779
MDU6SXNzdWU1MDc0Nzc5
1,471
More care with resampling intraday data to anchored frequencies
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0
"2012-06-14T16:54:28Z"
"2013-11-24T13:44:10Z"
"2012-06-14T19:09:35Z"
MEMBER
null
The convention of, say, MonthEnd at midnight will result in on _on that day_ being placed in the wrong bucket Referenced in #1458
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1,472
`autofmt_xdate` is a method of the figure, not axes.
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1
"2012-06-14T17:05:55Z"
"2014-07-28T00:03:54Z"
"2012-06-14T20:21:05Z"
CONTRIBUTOR
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MDU6SXNzdWU1MDc3OTg3
1,473
Bring in scipy.stats.mstats.mquantiles function
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1
"2012-06-14T19:43:01Z"
"2016-09-30T12:35:16Z"
"2016-09-29T22:15:42Z"
MEMBER
null
Implements many of R's quantile algorithms and more
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1,474
Tsplot gaps
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"2012-06-14T22:17:36Z"
"2014-06-13T16:16:35Z"
"2012-06-19T17:17:23Z"
CONTRIBUTOR
null
Issue #1466
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MDU6SXNzdWU1MDkwOTE2
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beta 0.8.0b2: creating timeseries with index in year 1400 yields wrong timestamp
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8
"2012-06-15T12:01:41Z"
"2012-06-22T16:21:39Z"
"2012-06-21T17:03:18Z"
CONTRIBUTOR
null
There seems to be some kind of wrap-around phenomenon if your index is too far away from now. For example if I create a timeseries with an index in 1400, the timeseries I get back has an index which is some time in 1984: ``` python In [1]: import datetime, pandas In [2]: pandas.version.version Out[2]: '0.8.0b2' In [3]: ts = pandas.TimeSeries(index=[ datetime.datetime(1400,1,2) ], data = [1]) In [4]: ts Out[4]: 1984-07-22 23:34:33.709551 1 ``` It doesn't seem to be a display issue because I can do: ``` python In [7]: ts.index[0].to_pydatetime() Warning: discarding nonzero nanoseconds Out[7]: datetime.datetime(1984, 7, 22, 23, 34, 33, 709551) ``` I tested I could get the same behaviour both using 32-bit and 64-bit python on windows. It seems to work fine for 0.7.3: ``` python In [1]: import datetime, pandas In [2]: pandas.version.version Out[2]: '0.7.3' In [3]: ts = pandas.TimeSeries(index=[datetime.datetime(1400,1,2)], data = [1]) In [4]: ts.index[0] Out[4]: datetime.datetime(1400, 1, 2, 0, 0) ```
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option to collapse gaps in tsplots
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Add "overwrite" option to DataFrame.update
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2
"2012-06-15T15:32:12Z"
"2012-06-19T17:07:14Z"
"2012-06-19T17:07:14Z"
CONTRIBUTOR
null
Current behavior always overwrites, allow users to set overwrite=False to leave all non-NA values in self intact.
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ENH: overwrite keyword in DataFrame.update
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0
"2012-06-15T15:41:45Z"
"2012-06-19T17:05:36Z"
"2012-06-19T17:05:36Z"
CONTRIBUTOR
null
#1477
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Additional methods for replace/fillna
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1
"2012-06-15T17:24:29Z"
"2013-09-21T01:26:02Z"
"2013-09-21T01:26:02Z"
CONTRIBUTOR
null
per conversation with @jseabold Maybe allow users to use Series.interpolate and other custom interpolation functions
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Slicing with duplicate index values error
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0
"2012-06-15T19:38:31Z"
"2012-06-19T17:36:17Z"
"2012-06-19T17:36:17Z"
MEMBER
null
``` If one has data with non-unique indices like this one: X.3 X.1_X.2 2004-01-02 08:12:30 1.2586 2004-01-02 08:12:31 1.2586 2004-01-02 08:12:32 1.2586 2004-01-02 08:12:32 1.2585 2004-01-02 08:12:36 1.2585 2004-01-02 08:12:37 1.2585 and one does a slicing like: data[datetime(2004,1,2,8,12,32):] it fails with IndexError: invalid slice Should it work ? Jochen whole traceback: /home/jgarcke/Prog/lib64/python2.6/site-packages/pandas-0.8.0b2-py2.6-linux-x86_64.egg/pandas/core/frame.pyc in __getitem__(self, key) 1572 else: 1573 indexer = self.ix._convert_to_indexer(key, axis=0) -> 1574 new_data = self._data.get_slice(indexer, axis=1) 1575 return self._constructor(new_data) 1576 # either boolean or fancy integer index /home/jgarcke/Prog/lib64/python2.6/site-packages/pandas-0.8.0b2-py2.6-linux-x86_64.egg/pandas/core/internals.pyc in get_slice(self, slobj, axis) 651 def get_slice(self, slobj, axis=0): 652 new_axes = list(self.axes) --> 653 new_axes[axis] = new_axes[axis][slobj] 654 655 if axis == 0: /home/jgarcke/Prog/lib64/python2.6/site-packages/pandas-0.8.0b2-py2.6-linux-x86_64.egg/pandas/tseries/index.pyc in __getitem__(self, key) 1040 new_offset = self.offset 1041 -> 1042 result = arr_idx[key] 1043 if result.ndim > 1: 1044 return result IndexError: invalid slice ```
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Test at_time / between_time functions on tz-localized time series
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Don't convert bday freq in ts plots
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"2012-06-15T20:11:25Z"
"2012-06-19T18:32:41Z"
"2012-06-19T18:32:41Z"
CONTRIBUTOR
null
X-axis should omit weekends if bday freq
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MonthStart resample errors on binning.
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"2012-06-15T21:32:02Z"
"2012-06-19T20:46:47Z"
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CONTRIBUTOR
null
``` python from pandas import * N = 1000 s = Series(np.arange(N), index=date_range(start='1/1/2012', freq='5min', periods=N)) s.resample('MS') ``` Not sure if this is new, first time using MS.
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TestDataFramePlots.test_scatter fails with matplotlib v1.0.1
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3
"2012-06-16T23:24:50Z"
"2012-06-30T01:16:54Z"
"2012-06-21T23:11:06Z"
NONE
null
# Synopsis The FreeBSD port for matplotlib has not yet been updated to v1.1.0. In the mean time, this test fails due to a default marker type ('.') that is unknown in matplotlib v1.0.1. # Details ## Environment ``` # uname -a FreeBSD REDACTED 9.0-STABLE FreeBSD 9.0-STABLE #0 r236450: Sat Jun 2 11:08:51 EDT 2012 root@REDACTED:/usr/obj/usr/src/sys/NIPPL amd64 # pkg_info -oxQ pandas matplotlib py27-matplotlib-1.0.1_4:math/py-matplotlib py27-pandas-0.8.0.b2:math/py-pandas ``` ## How to reproduce ``` # nosetests -xv pandas.tests.test_graphics:TestDataFramePlots.test_scatter test_scatter (pandas.tests.test_graphics.TestDataFramePlots) ... ERROR ====================================================================== ERROR: test_scatter (pandas.tests.test_graphics.TestDataFramePlots) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/local/lib/python2.7/site-packages/pandas-0.8.0b2-py2.7-freebsd-9.0-STABLE-amd64.egg/pandas/tests/test_graphics.py", line 252, in test_scatter _check_plot_works(scat) File "/usr/local/lib/python2.7/site-packages/pandas-0.8.0b2-py2.7-freebsd-9.0-STABLE-amd64.egg/pandas/tests/test_graphics.py", line 301, in _check_plot_works ret = f(*args, **kwargs) File "/usr/local/lib/python2.7/site-packages/pandas-0.8.0b2-py2.7-freebsd-9.0-STABLE-amd64.egg/pandas/tests/test_graphics.py", line 251, in scat return plt.scatter_matrix(df, **kwds) File "/usr/local/lib/python2.7/site-packages/pandas-0.8.0b2-py2.7-freebsd-9.0-STABLE-amd64.egg/pandas/tools/plotting.py", line 71, in scatter_matrix marker=marker, alpha=alpha, **kwds) File "/usr/local/lib/python2.7/site-packages/matplotlib/axes.py", line 5738, in scatter raise ValueError('Unknown marker symbol to scatter') ValueError: Unknown marker symbol to scatter ---------------------------------------------------------------------- Ran 1 test in 0.633s FAILED (errors=1) ``` ## Code analysis [pandas/tests/test_graphics.py:252](https://github.com/pydata/pandas/blob/fde270b20861fbf36d3063d504fb299d0b58695b/pandas/tests/test_graphics.py#L252) does not specify a marker type. [pandas/tools/plotting.py:22](https://github.com/pydata/pandas/blob/d7966d22f14375547e263347ec648dcba7b65617/pandas/tools/plotting.py#L22) defines `'.'` as the default value for the `marker` [matplotlib/axes.py:5669-5682](https://github.com/matplotlib/matplotlib/blob/a9f3f3a50745a1ca0e666bb1b6d0b9d782553dd9/lib/matplotlib/axes.py#L5669-5682) list the marker types recognized in matplotlib v1.0.1. ## Suggested resolution Choose a marker type available in matplotlib v1.0.1 (e.g. `'o'`).
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fillna called with a Series not behave like a dict
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Time series dtype bug in DataFrame constructor
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from pandas import Series, DataFrame import pandas as pd rng1 = pd.date_range('1/1/1999', '1/1/2012', freq='MS') s1 = Series(np.random.randn(len(rng1)), rng1) rng2 = pd.date_range('1/1/1980', '12/1/2001', freq='MS') s2 = Series(np.random.randn(len(rng2)), rng2) df = DataFrame({'s1' : s1, 's2' : s2}) # s1 is fine In [39]: s1.index.dtype Out[39]: dtype('datetime64[ns]') In [41]: s1.index.values.dtype Out[41]: dtype('datetime64[ns]') # s2 is fine In [40]: s2.index.dtype Out[40]: dtype('datetime64[ns]') In [42]: s2.index.values.dtype Out[42]: dtype('datetime64[ns]') # df.index looks fine In [43]: df.index.dtype Out[43]: dtype('datetime64[ns]') # WAT?! In [44]: df.index.values.dtype Out[44]: dtype('datetime64[us]')
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MDU6SXNzdWU1MTE0OTE0
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DataFrame constructor (dict of tuples)
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1
"2012-06-17T22:31:09Z"
"2012-06-21T22:57:20Z"
"2012-06-21T22:57:20Z"
NONE
null
This might be an API change instead of an issue, but just in case, could you please confirm that this should crash? ``` DataFrame({'a':(1,2,3)}) ``` with this error: ``` *** ValueError: If use all scalar values, must pass index ``` Using a dictionary where the values are equal length tuples used to work in 0.7. Thanks!
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5,115,712
MDExOlB1bGxSZXF1ZXN0MTU4NDA4OQ==
1,492
yahoo quote percent changed as float
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1
"2012-06-18T01:19:59Z"
"2012-06-19T17:04:08Z"
"2012-06-19T17:04:08Z"
CONTRIBUTOR
null
Changed "get_quote_yahoo" to parse the change_pct as a float instead of a string.
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Keywords not being passed on in DataFrame.boxplot
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1
"2012-06-18T14:49:20Z"
"2012-06-18T19:02:53Z"
"2012-06-18T19:02:53Z"
MEMBER
null
``` Pandas uses the matplotlib boxplot, but it does not support passing down the argument 'notch=1' to the actual matplotlib boxplot call. df.boxplot(notch=1) gives a traceback Although according to documentation there should be some kind of kwds mechanism, there is none in fact. Docstring: boxplot(self, column=None, by=None, ax=None, fontsize=None, rot=0, grid=True, **kwds) method of pandas.core.frame.DataFrame instance ```
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1,494
When constructing DataFrame from list of Series use names for index.
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0
"2012-06-18T19:43:01Z"
"2012-06-25T14:14:07Z"
"2012-06-25T14:14:07Z"
CONTRIBUTOR
null
From [mailing list](https://groups.google.com/forum/?fromgroups#!topic/pydata/RP_LdVyD1v0) When constructing a DataFrame from a list of series, use the series name as index value (if possible). Workaround is to use `DataFrame.from_items()` ``` python In [21]: series = [pandas.Series(np.random.rand(3), name=c) for c in list('abcdefg')] In [22]: df = pandas.DataFrame(series) In [23]: df Out[23]: 0 1 2 0 0.609676 0.023603 0.687154 1 0.060276 0.173545 0.216510 2 0.016216 0.078186 0.493883 3 0.648037 0.640642 0.652898 4 0.590155 0.132365 0.257735 5 0.590068 0.124617 0.104589 6 0.364781 0.473282 0.218554 In [24]: df = pandas.DataFrame.from_items([(s.name, s) for s in series]).T In [25]: df Out[25]: 0 1 2 a 0.609676 0.023603 0.687154 b 0.060276 0.173545 0.216510 c 0.016216 0.078186 0.493883 d 0.648037 0.640642 0.652898 e 0.590155 0.132365 0.257735 f 0.590068 0.124617 0.104589 g 0.364781 0.473282 0.218554 ```
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Secondary y-axis for line/bar/density plots
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1
"2012-06-18T20:28:21Z"
"2012-06-19T17:01:37Z"
"2012-06-19T17:01:37Z"
CONTRIBUTOR
null
can specify by column in subplots=True need more complex handling (esp. with legends) if need to do secondary y-axis by column when subplots=False
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5,135,828
MDU6SXNzdWU1MTM1ODI4
1,496
Improve date_range/bdate_range docstrings
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5,143,252
MDU6SXNzdWU1MTQzMjUy
1,497
Index access not inconsistent?
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5
"2012-06-19T10:16:35Z"
"2012-06-19T13:56:53Z"
"2012-06-19T10:55:08Z"
CONTRIBUTOR
null
Isn't it inconsistent to allow ``` df[20:30] ``` but not ``` df[20] ``` ?
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5,146,520
MDU6SXNzdWU1MTQ2NTIw
1,498
concat doesn't work around datetime64[ns] concatenate bug in NumPy 1.6
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"2012-06-19T13:47:44Z"
"2012-06-19T15:10:15Z"
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MEMBER
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5,148,649
MDU6SXNzdWU1MTQ4NjQ5
1,499
Series datetime64[ns] boxing issue
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"2012-06-19T15:14:07Z"
"2012-06-19T16:33:55Z"
"2012-06-19T16:33:55Z"
MEMBER
null
Boxing does not happen in `DatetimeEngine`
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ERROR: test_argmin_argmax (pandas.tseries.tests.test_timeseries.TestDatetimeIndex)
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1
"2012-06-20T10:05:07Z"
"2013-12-04T00:58:03Z"
"2012-06-20T20:35:20Z"
NONE
null
``` Traceback (most recent call last): File "/home/agerigk/python-packages/pandas/pandas/tseries/tests/test_timeseries.py", line 1106, in test_argmin_argmax self.assertEqual(idx.argmin(), 1) File "/home/agerigk/python-packages/pandas/pandas/tseries/index.py", line 1041, in argmin return (-self).argmax() TypeError: ufunc 'negative' did not contain a loop with signature matching types dtype('<M8[ns]') dtype('<M8[ns]') ---------------------------------------------------------------------- Ran 2037 tests in 23.856s FAILED (SKIP=46, errors=1) ```
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