metadata

license: apache-2.0
task_categories:
  - text-classification
tags:
  - protein
  - downstream task

DeepET_Topt Dataset

Description: protein optimum temperature.
Number of labels: 1
Problem Type: regression
Columns:
- aa_seq: protein amino acid sequence
- ss8_seq: DSSP 8 secondary structure sequence
- foldseek_seq: foldseek 20 3di structural sequence
- ss3_seq: DSSP 3 secondary structure sequence

Github

VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning

https://github.com/ai4protein/VenusFactory

Citation

Please cite our work if you use our dataset.

@article{tan2025venusfactory,
  title={VenusFactory: A Unified Platform for Protein Engineering Data Retrieval and Language Model Fine-Tuning},
  author={Tan, Yang and Liu, Chen and Gao, Jingyuan and Wu, Banghao and Li, Mingchen and Wang, Ruilin and Zhang, Lingrong and Yu, Huiqun and Fan, Guisheng and Hong, Liang and Zhou, Bingxin},
  journal={arXiv preprint arXiv:2503.15438},
  year={2025}
}