app.py

import gradio as gr
from ps4_eval.eval import sample_new_sequence
from ps4_data.get_embeddings import generate_embedings


def pred(residue_seq):
    embs = generate_embedings(residue_seq)["residue_embs"]["0"]
    preds = sample_new_sequence(embs, "ps4_models/Mega/PS4-Mega_loss-0.633_acc-78.176.pt")
    return preds


iface = gr.Interface(fn=pred, title="Protein Secondary Structure Prediction with PS4-Mega",
                     inputs="text", outputs="text", examples=[
    ["HXHVWPVQDAKARFSEFLDACITEGPQIVSRRGAEEAVLVPIGEWRRLQAAA"],
    ["AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA"]
])
iface.launch()