Update feedback message in create_interface function to clarify analysis terminology

Update README to enhance image description and correct terminology for clarity

Remove commented return statement in analyse_abstracts function for cleaner code

Update reasoning model ID to Mistral-7B-Instruct-v0.3 and comment out previous model

Update feedback message in create_interface function for clarity and user guidance

Remove YAML header from README display in About tab for cleaner presentation

Refactor response handling in generate function and add generate_swanson_style_prompt for bridge detection

Update inkling-logo.png to new version with reduced size

Update .gitignore to include .venv/ and data/ directories for better environment management

Refactor UI layout in create_interface function to use tabs for better organization and accessibility of content

Revise README to enhance clarity and detail about Inkling's purpose and functionality

Bump Gradio SDK to 5.29.0. Comment-out python version because something keeps on munging it to "3.1" instead of "3.10". And the ZeroGPU Spaces only support a single python version anyway = 3.10.?

Remove commented-out error handling structure in format_search_results function

Refactor error handling in format_search_results function to return structured error messages

Add error handling for find_synergistic_papers in format_search_results_json and format_search_results functions

Implement caching for query results and enhance logging in log_query_and_results function

Fix timestamp creation in log_query_and_results function

Update privacy policy and disclaimer in create_interface function to clarify logging of queries and results

Add logging for query results and improve data path handling

Remove unused dataset_name import and HF_TOKEN parameter from DatasetManager initialization

Uncomment latex delimiter for inline math formatting in format_paper_as_markdown

Refactor dataset management and improve dataset update functionality

Refactor find_synergistic_papers to use DatasetManager for accessing the training dataset

Add DatasetManager for handling dataset operations and update dataset with new papers

Fix function calls in format_search_results_json and format_search_results to use abstract parameter directly

Fix function calls in format_search_results_json and format_search_results to use find_synergistic_papers directly

Remove commented-out Hugging Face Hub login code for clarity

Refactor embedding model integration and update find_synergistic_papers calls to use dataset parameter

Normalize abstract input in find_synergistic_papers to improve cosine similarity calculations and handle empty inputs.

Add JSON output logging and change output format for synergistic papers in create_interface

Add JSON formatting for search results in find_synergistic_papers

Add label to hidden abstract input textbox for clarity in create_interface

Refactor code formatting for improved readability and consistency in analysis and interface functions

Revert 0529f34412eba1ce68c492559e72c506823c3094

Add hidden UI elements and API endpoint for find_synergistic_papers

Update format_search_results to return additional papers alongside data and headers

Rename API endpoint in create_interface to find_synergistic_papers for clarity

Refactor format_search_results to return a dictionary with 'data' and 'headers' keys instead of a DataFrame

Add `__pycache__` to `.gitignore` to prevent caching files from being tracked

Fix citation link in README for accuracy

Update README

Add detailed background and motivation sections to README

Update README.md

Add the Inkling logo to the README

Add inkling-logo.png to Git LFS for efficient storage

Add support for PNG files in Git LFS tracking

Update color scheme in README to use yellow instead of gold

Update color scheme in README to enhance visual appeal

Update emoji in README to better represent Inkling's global research capabilities

Update short description in README for clarity on research discovery capabilities