add 3d render
Browse files
app.py
CHANGED
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@@ -480,6 +480,37 @@ def pdbsummary(name):
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return answer
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def create_interactive_table(df):
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if df.empty:
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return go.Figure()
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@@ -707,6 +738,15 @@ app_ui = ui.page_fluid(
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ui.output_text("sequence_output")
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)
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)
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@@ -779,10 +819,23 @@ def server(input, output, session):
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return "\n".join(output_text)
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return ""
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app = App(app_ui, server)
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if __name__ == "__main__":
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import nest_asyncio
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nest_asyncio.apply()
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-
app.run(host="0.0.0.0", port=7862)
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return answer
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+
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def render_html(pdb_id, chain="A"):
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if pdb_id is None or chain is None:
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return ""
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html_content = f"""
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<html>
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<header>
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<script src="https://3Dmol.org/build/3Dmol-min.js"></script>
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<script src="https://3Dmol.org/build/3Dmol.ui-min.js"></script>
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</header>
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<body>
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<div style="height: 400px; position: relative;" class="viewer_3Dmoljs"
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data-pdb="{pdb_id}"
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data-backgroundalpha="0.0"
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data-style="cartoon:color=white"
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data-select1="chain:{chain}"
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data-zoomto="chain:{chain}"
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data-style1="cartoon:color=spectrum"
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data-spin="axis:y;speed:0.2">
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</div>
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</body>
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</html>
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"""
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iframe = f"""
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<iframe style="width: 100%; height: 480px; border: none;"
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srcdoc='{html_content}'>
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</iframe>
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"""
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return iframe
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def create_interactive_table(df):
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if df.empty:
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return go.Figure()
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ui.output_text("sequence_output")
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)
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)
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),
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ui.row(
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ui.column(12,
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ui.div(
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{"class": "3d-iframe", "id": "3d-iframe"}, # css 미설정
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ui.h4("3D Rendering"),
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ui.output_ui("output_iframe")
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)
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)
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)
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)
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)
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return "\n".join(output_text)
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return ""
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+
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@output
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@render.text
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def output_iframe():
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current_results = results_store.get()
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if current_results["type"] == "structure":
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pdb_id = current_results["results"][0]['PDB ID']
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# chain 가져오는 건 아직
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return render_html(pdb_id, "A")
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else:
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return ""
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app = App(app_ui, server)
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if __name__ == "__main__":
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import nest_asyncio
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nest_asyncio.apply()
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app.run(host="0.0.0.0", port=7862)
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