import os import json import scipy.io as spio import pandas as pd def loadmat(filename): ''' this function should be called instead of direct spio.loadmat as it cures the problem of not properly recovering python dictionaries from mat files. It calls the function check keys to cure all entries which are still mat-objects ''' data = spio.loadmat(filename, struct_as_record=False, squeeze_me=True) return dict_to_nonedict(_check_keys(data)) def _check_keys(dict): ''' checks if entries in dictionary are mat-objects. If yes todict is called to change them to nested dictionaries ''' for key in dict: if isinstance(dict[key], spio.matlab.mio5_params.mat_struct): dict[key] = _todict(dict[key]) return dict def _todict(matobj): ''' A recursive function which constructs from matobjects nested dictionaries ''' dict = {} for strg in matobj._fieldnames: elem = matobj.__dict__[strg] if isinstance(elem, spio.matlab.mio5_params.mat_struct): dict[strg] = _todict(elem) else: dict[strg] = elem return dict def dict_to_nonedict(opt): if isinstance(opt, dict): new_opt = dict() for key, sub_opt in opt.items(): new_opt[key] = dict_to_nonedict(sub_opt) return NoneDict(**new_opt) elif isinstance(opt, list): return [dict_to_nonedict(sub_opt) for sub_opt in opt] else: return opt class NoneDict(dict): def __missing__(self, key): return None def mat2json(mat_path=None, filepath = None): """ Converts .mat file to .json and writes new file Parameters ---------- mat_path: Str path/filename .mat存放路径 filepath: Str 如果需要保存成json, 添加这一路径. 否则不保存 Returns 返回转化的字典 ------- None Examples -------- >>> mat2json(blah blah) """ matlabFile = loadmat(mat_path) #pop all those dumb fields that don't let you jsonize file matlabFile.pop('__header__') matlabFile.pop('__version__') matlabFile.pop('__globals__') #jsonize the file - orientation is 'index' matlabFile = pd.Series(matlabFile).to_json() if filepath: json_path = os.path.splitext(os.path.split(mat_path)[1])[0] + '.json' with open(json_path, 'w') as f: f.write(matlabFile) return matlabFile