Spaces:
Build error
Build error
Commit
·
44339bc
1
Parent(s):
edee466
Multiprocessing 8
Browse files- file_list.txt +0 -3
- src/fetch_files.py +28 -18
file_list.txt
CHANGED
|
@@ -48,9 +48,6 @@ demo_data/demo/2/43789_right.jpeg
|
|
| 48 |
demo_data/demo/2/7906_right.jpeg
|
| 49 |
demo_data/demo/2/31160_left.jpeg
|
| 50 |
demo_data/demo/2/7805_right.jpeg
|
| 51 |
-
release_ckpts/2023-12-20_18-39-06_30301601_V100_x4_resnet50_896_setseeds/inference/preprocessor_config.json
|
| 52 |
-
release_ckpts/2023-12-20_18-39-06_30301601_V100_x4_resnet50_896_setseeds/inference/config.json
|
| 53 |
-
release_ckpts/2023-12-20_18-39-06_30301601_V100_x4_resnet50_896_setseeds/inference/model.safetensors
|
| 54 |
release_ckpts/2023-12-24_20-02-18_30345221_V100_x4_resnet34/inference/preprocessor_config.json
|
| 55 |
release_ckpts/2023-12-24_20-02-18_30345221_V100_x4_resnet34/inference/model.safetensors
|
| 56 |
release_ckpts/2023-12-24_20-02-18_30345221_V100_x4_resnet34/inference/config.json
|
|
|
|
| 48 |
demo_data/demo/2/7906_right.jpeg
|
| 49 |
demo_data/demo/2/31160_left.jpeg
|
| 50 |
demo_data/demo/2/7805_right.jpeg
|
|
|
|
|
|
|
|
|
|
| 51 |
release_ckpts/2023-12-24_20-02-18_30345221_V100_x4_resnet34/inference/preprocessor_config.json
|
| 52 |
release_ckpts/2023-12-24_20-02-18_30345221_V100_x4_resnet34/inference/model.safetensors
|
| 53 |
release_ckpts/2023-12-24_20-02-18_30345221_V100_x4_resnet34/inference/config.json
|
src/fetch_files.py
CHANGED
|
@@ -1,33 +1,43 @@
|
|
| 1 |
import os
|
| 2 |
import requests
|
|
|
|
| 3 |
|
| 4 |
REPO_ROOT = os.path.realpath(os.path.join(os.path.split(__file__)[0], ".."))
|
| 5 |
|
| 6 |
|
| 7 |
-
def
|
| 8 |
s3_url = "https://sdaia-kaust-public.s3.us-east-2.amazonaws.com/diabetic-retinopathy-detection/"
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 9 |
flist_path = os.path.join(REPO_ROOT, "file_list.txt")
|
|
|
|
| 10 |
with open(flist_path, "r") as file:
|
| 11 |
for line in file:
|
| 12 |
subpath = line.strip()
|
| 13 |
-
|
| 14 |
-
|
| 15 |
-
|
| 16 |
-
|
| 17 |
-
|
| 18 |
-
print(f"Downloading {url}...")
|
| 19 |
-
req = requests.get(url)
|
| 20 |
-
if not req.ok:
|
| 21 |
-
print(f"Failed to download {url}")
|
| 22 |
-
continue
|
| 23 |
-
print(f"Downloaded {url}")
|
| 24 |
-
target_dir = os.path.split(target_path)[0]
|
| 25 |
-
os.makedirs(target_dir, exist_ok=True)
|
| 26 |
-
with open(target_path, "wb") as fdst:
|
| 27 |
-
fdst.write(req.content)
|
| 28 |
-
print(f"Saved to {target_path}")
|
| 29 |
print("File fetching done")
|
| 30 |
-
return
|
| 31 |
|
| 32 |
|
| 33 |
if __name__ == "__main__":
|
|
|
|
| 1 |
import os
|
| 2 |
import requests
|
| 3 |
+
import multiprocessing
|
| 4 |
|
| 5 |
REPO_ROOT = os.path.realpath(os.path.join(os.path.split(__file__)[0], ".."))
|
| 6 |
|
| 7 |
|
| 8 |
+
def fetch_one(subpath: str) -> None:
|
| 9 |
s3_url = "https://sdaia-kaust-public.s3.us-east-2.amazonaws.com/diabetic-retinopathy-detection/"
|
| 10 |
+
|
| 11 |
+
url = f"{s3_url}{subpath}"
|
| 12 |
+
target_path = os.path.join(REPO_ROOT, subpath)
|
| 13 |
+
if os.path.exists(target_path):
|
| 14 |
+
print(f"File already in place: {target_path}")
|
| 15 |
+
return
|
| 16 |
+
print(f"Downloading {url}...")
|
| 17 |
+
req = requests.get(url)
|
| 18 |
+
if not req.ok:
|
| 19 |
+
print(f"Failed to download {url}")
|
| 20 |
+
return
|
| 21 |
+
print(f"Downloaded {url}")
|
| 22 |
+
target_dir = os.path.split(target_path)[0]
|
| 23 |
+
os.makedirs(target_dir, exist_ok=True)
|
| 24 |
+
with open(target_path, "wb") as fdst:
|
| 25 |
+
fdst.write(req.content)
|
| 26 |
+
print(f"Saved to {target_path}")
|
| 27 |
+
|
| 28 |
+
|
| 29 |
+
def fetch_files():
|
| 30 |
flist_path = os.path.join(REPO_ROOT, "file_list.txt")
|
| 31 |
+
subpaths = []
|
| 32 |
with open(flist_path, "r") as file:
|
| 33 |
for line in file:
|
| 34 |
subpath = line.strip()
|
| 35 |
+
subpaths.append(subpath)
|
| 36 |
+
|
| 37 |
+
with multiprocessing.Pool(8) as pool:
|
| 38 |
+
pool.map(fetch_one, subpaths)
|
| 39 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 40 |
print("File fetching done")
|
|
|
|
| 41 |
|
| 42 |
|
| 43 |
if __name__ == "__main__":
|