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Build error
Build error
Update slider output in app.py
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app.py
CHANGED
@@ -18,10 +18,12 @@ BUNDLE_PATH = os.path.join(torch.hub.get_dir(), 'bundle', BUNDLE_NAME)
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title = "Segment Brain Tumors with MONAI!"
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description = """
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"""
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examples = 'examples/'
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model, _, _ = bundle.load(
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name = BUNDLE_NAME,
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@@ -65,16 +67,16 @@ def predict(input_file, z_axis, model=model, device=device):
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input_image = data['image'].numpy()
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pred_image = data['pred'].cpu().detach().numpy()
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#input_t2_image = input_image[2, :, :, z_axis]
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#input_flair_image = input_image[3, :, :, z_axis]
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#
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#
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return input_t1c_image,
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iface = gr.Interface(
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@@ -89,7 +91,7 @@ iface = gr.Interface(
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gr.Slider(0, 200, label='z-axis', value=100)],
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title=title,
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description=description,
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examples=examples,
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)
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iface.launch()
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title = "Segment Brain Tumors with MONAI!"
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description = """
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A pre-trained model for volumetric (3D) segmentation of brain tumor subregions from multimodal MRIs based on BraTS 2018 data.
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"""
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#examples = 'examples/'
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model, _, _ = bundle.load(
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name = BUNDLE_NAME,
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input_image = data['image'].numpy()
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pred_image = data['pred'].cpu().detach().numpy()
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input_t1c_image = input_image[0, :, :, z_axis]
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#input_t1_image = input_image[1, :, :, z_axis]
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#input_t2_image = input_image[2, :, :, z_axis]
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#input_flair_image = input_image[3, :, :, z_axis]
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pred_tc_image = pred_image[0, 0, :, :, z_axis]
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#pred_et_image = pred_image[0, 1, :, :, z_axis]
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#pred_wt_image = pred_image[0, 2, :, :, z_axis]
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return input_t1c_image, pred_tc_image, z_axis
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iface = gr.Interface(
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gr.Slider(0, 200, label='z-axis', value=100)],
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title=title,
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description=description,
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#examples=examples,
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)
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iface.launch()
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