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acc110e
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update reference

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  1. app.py +4 -17
app.py CHANGED
@@ -34,26 +34,13 @@ st.set_page_config(
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  multi-task generalization in various domains, such as personalized federated learning and neural architecture
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  search. Especially powerful results were achieved in few- and zero-shot settings, attributed to the increased
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  information sharing by the HyperNetwork. With the rise of new diseases fast discovery of drugs is needed which
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- requires models that are able to generalize drug-target interaction predictions in low-data scenarios.
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  In this work, we propose the HyperPCM model, a task-conditioned HyperNetwork approach for the problem of
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  predicting drug-target interactions in drug discovery. Our model learns to generate a QSAR model specialized on
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  a given protein target. We demonstrate state-of-the-art performance over previous methods on multiple
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  well-known benchmarks, particularly in zero-shot settings for unseen protein targets. This app demonstrates the
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  model as a retrieval task of the top-k most active drug compounds predicted for a given query target.
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-
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- ## Citation
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-
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- Please cite our work using the following reference.
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- """bibtex
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- @article{svensson2024hyperpcm,
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- title={{HyperPCM: Robust Task-Conditioned Modeling of Drug--Target Interactions}},
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- author={Svensson, Emma and Hoedt, Pieter-Jan and Hochreiter, Sepp and Klambauer, G{\"u}nter},
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- journal={Journal of Chemical Information and Modeling},
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- publisher={ACS Publications},
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- year={2024}
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- }
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- """
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  '''
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  }
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@@ -77,7 +64,7 @@ def about_page():
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  multi-task generalization in various domains, such as personalized federated learning and neural architecture
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  search. Especially powerful results were achieved in few- and zero-shot settings, attributed to the increased
79
  information sharing by the HyperNetwork. With the rise of new diseases fast discovery of drugs is needed which
80
- requires models that are able to generalize drug-target interaction predictions in low-data scenarios.
81
 
82
  In this work, we propose the HyperPCM model, a task-conditioned HyperNetwork approach for the problem of
83
  predicting drug-target interactions in drug discovery. Our model learns to generate a QSAR model specialized on
@@ -94,7 +81,7 @@ def about_page():
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  ### Citation
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  Please cite our work using the following reference.
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- '''bibtex
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  @article{svensson2024hyperpcm,
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  title={{HyperPCM: Robust Task-Conditioned Modeling of Drug--Target Interactions}},
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  author={Svensson, Emma and Hoedt, Pieter-Jan and Hochreiter, Sepp and Klambauer, G{\"u}nter},
@@ -102,7 +89,7 @@ def about_page():
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  publisher={ACS Publications},
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  year={2024}
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  }
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- '''
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  """
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  )
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34
  multi-task generalization in various domains, such as personalized federated learning and neural architecture
35
  search. Especially powerful results were achieved in few- and zero-shot settings, attributed to the increased
36
  information sharing by the HyperNetwork. With the rise of new diseases fast discovery of drugs is needed which
37
+ requires models that can generalize drug-target interaction predictions in low-data scenarios.
38
 
39
  In this work, we propose the HyperPCM model, a task-conditioned HyperNetwork approach for the problem of
40
  predicting drug-target interactions in drug discovery. Our model learns to generate a QSAR model specialized on
41
  a given protein target. We demonstrate state-of-the-art performance over previous methods on multiple
42
  well-known benchmarks, particularly in zero-shot settings for unseen protein targets. This app demonstrates the
43
  model as a retrieval task of the top-k most active drug compounds predicted for a given query target.
 
 
 
 
 
 
 
 
 
 
 
 
 
44
  '''
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  }
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64
  multi-task generalization in various domains, such as personalized federated learning and neural architecture
65
  search. Especially powerful results were achieved in few- and zero-shot settings, attributed to the increased
66
  information sharing by the HyperNetwork. With the rise of new diseases fast discovery of drugs is needed which
67
+ requires models that can generalize drug-target interaction predictions in low-data scenarios.
68
 
69
  In this work, we propose the HyperPCM model, a task-conditioned HyperNetwork approach for the problem of
70
  predicting drug-target interactions in drug discovery. Our model learns to generate a QSAR model specialized on
 
81
  ### Citation
82
 
83
  Please cite our work using the following reference.
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+ ```bibtex
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  @article{svensson2024hyperpcm,
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  title={{HyperPCM: Robust Task-Conditioned Modeling of Drug--Target Interactions}},
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  author={Svensson, Emma and Hoedt, Pieter-Jan and Hochreiter, Sepp and Klambauer, G{\"u}nter},
 
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  publisher={ACS Publications},
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  year={2024}
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  }
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+ ```
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  """
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  )
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