taprosoft
commited on
Commit
·
0933b39
1
Parent(s):
3bce890
fix: add requirements.txt, fix empty debug dir
Browse files- .gitignore +467 -0
- app.py +14 -14
- backends/docling.py +6 -3
- backends/marker.py +6 -3
- backends/mineru.py +8 -6
- backends/unstructured.py +6 -3
- requirements.txt +20 -0
- utils.py +2 -0
.gitignore
ADDED
@@ -0,0 +1,467 @@
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1 |
+
# Created by https://www.toptal.com/developers/gitignore/api/python,linux,macos,windows,vim,emacs,visualstudiocode,pycharm
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# Edit at https://www.toptal.com/developers/gitignore?templates=python,linux,macos,windows,vim,emacs,visualstudiocode,pycharm
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activate*
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activate/*
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# -*- mode: gitignore; -*-
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309 |
+
# having no cross-platform support, pipenv may install dependencies that don't work, or not
|
310 |
+
# install all needed dependencies.
|
311 |
+
#Pipfile.lock
|
312 |
+
|
313 |
+
# poetry
|
314 |
+
# Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
|
315 |
+
# This is especially recommended for binary packages to ensure reproducibility, and is more
|
316 |
+
# commonly ignored for libraries.
|
317 |
+
# https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
|
318 |
+
#poetry.lock
|
319 |
+
|
320 |
+
# pdm
|
321 |
+
# Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
|
322 |
+
#pdm.lock
|
323 |
+
# pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
|
324 |
+
# in version control.
|
325 |
+
# https://pdm.fming.dev/#use-with-ide
|
326 |
+
.pdm.toml
|
327 |
+
|
328 |
+
# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
|
329 |
+
__pypackages__/
|
330 |
+
|
331 |
+
# Celery stuff
|
332 |
+
celerybeat-schedule
|
333 |
+
celerybeat.pid
|
334 |
+
|
335 |
+
# SageMath parsed files
|
336 |
+
*.sage.py
|
337 |
+
|
338 |
+
# Environments
|
339 |
+
.venv
|
340 |
+
env/
|
341 |
+
venv/
|
342 |
+
ENV/
|
343 |
+
env.bak/
|
344 |
+
venv.bak/
|
345 |
+
|
346 |
+
# Spyder project settings
|
347 |
+
.spyderproject
|
348 |
+
.spyproject
|
349 |
+
|
350 |
+
# Rope project settings
|
351 |
+
.ropeproject
|
352 |
+
|
353 |
+
# mkdocs documentation
|
354 |
+
/site
|
355 |
+
|
356 |
+
# mypy
|
357 |
+
.mypy_cache/
|
358 |
+
.dmypy.json
|
359 |
+
dmypy.json
|
360 |
+
|
361 |
+
# Pyre type checker
|
362 |
+
.pyre/
|
363 |
+
|
364 |
+
# pytype static type analyzer
|
365 |
+
.pytype/
|
366 |
+
|
367 |
+
# Cython debug symbols
|
368 |
+
cython_debug/
|
369 |
+
|
370 |
+
# PyCharm
|
371 |
+
# JetBrains specific template is maintained in a separate JetBrains.gitignore that can
|
372 |
+
# be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
|
373 |
+
# and can be added to the global gitignore or merged into this file. For a more nuclear
|
374 |
+
# option (not recommended) you can uncomment the following to ignore the entire idea folder.
|
375 |
+
#.idea/
|
376 |
+
|
377 |
+
### Python Patch ###
|
378 |
+
# Poetry local configuration file - https://python-poetry.org/docs/configuration/#local-configuration
|
379 |
+
poetry.toml
|
380 |
+
|
381 |
+
# ruff
|
382 |
+
.ruff_cache/
|
383 |
+
|
384 |
+
# LSP config files
|
385 |
+
pyrightconfig.json
|
386 |
+
|
387 |
+
### Vim ###
|
388 |
+
# Swap
|
389 |
+
[._]*.s[a-v][a-z]
|
390 |
+
!*.svg # comment out if you don't need vector files
|
391 |
+
[._]*.sw[a-p]
|
392 |
+
[._]s[a-rt-v][a-z]
|
393 |
+
[._]ss[a-gi-z]
|
394 |
+
[._]sw[a-p]
|
395 |
+
|
396 |
+
# Session
|
397 |
+
Session.vim
|
398 |
+
Sessionx.vim
|
399 |
+
|
400 |
+
# Temporary
|
401 |
+
.netrwhist
|
402 |
+
# Auto-generated tag files
|
403 |
+
tags
|
404 |
+
# Persistent undo
|
405 |
+
[._]*.un~
|
406 |
+
|
407 |
+
### VisualStudioCode ###
|
408 |
+
.vscode/*
|
409 |
+
!.vscode/settings.json
|
410 |
+
!.vscode/tasks.json
|
411 |
+
!.vscode/launch.json
|
412 |
+
!.vscode/extensions.json
|
413 |
+
!.vscode/*.code-snippets
|
414 |
+
|
415 |
+
# Local History for Visual Studio Code
|
416 |
+
.history/
|
417 |
+
|
418 |
+
# Built Visual Studio Code Extensions
|
419 |
+
*.vsix
|
420 |
+
|
421 |
+
### VisualStudioCode Patch ###
|
422 |
+
# Ignore all local history of files
|
423 |
+
.history
|
424 |
+
.ionide
|
425 |
+
|
426 |
+
### Windows ###
|
427 |
+
# Windows thumbnail cache files
|
428 |
+
Thumbs.db
|
429 |
+
Thumbs.db:encryptable
|
430 |
+
ehthumbs.db
|
431 |
+
ehthumbs_vista.db
|
432 |
+
|
433 |
+
# Dump file
|
434 |
+
*.stackdump
|
435 |
+
|
436 |
+
# Folder config file
|
437 |
+
[Dd]esktop.ini
|
438 |
+
|
439 |
+
# Recycle Bin used on file shares
|
440 |
+
$RECYCLE.BIN/
|
441 |
+
|
442 |
+
# Windows Installer files
|
443 |
+
*.cab
|
444 |
+
*.msi
|
445 |
+
*.msix
|
446 |
+
*.msm
|
447 |
+
*.msp
|
448 |
+
|
449 |
+
# Windows shortcuts
|
450 |
+
*.lnk
|
451 |
+
|
452 |
+
# PDF files
|
453 |
+
*.pdf
|
454 |
+
|
455 |
+
# End of https://www.toptal.com/developers/gitignore/api/python,linux,macos,windows,vim,emacs,visualstudiocode,pycharm
|
456 |
+
*.py[coid]
|
457 |
+
|
458 |
+
logs/
|
459 |
+
.gitsecret/keys/random_seed
|
460 |
+
!*.secret
|
461 |
+
.envrc
|
462 |
+
.env
|
463 |
+
|
464 |
+
S.gpg-agent*
|
465 |
+
.vscode/settings.json
|
466 |
+
examples/example1/assets
|
467 |
+
storage/*
|
app.py
CHANGED
@@ -53,7 +53,7 @@ def convert_document(path, method, enabled=True):
|
|
53 |
|
54 |
def show_tabs(selected_methods):
|
55 |
visible_tabs = []
|
56 |
-
for method in
|
57 |
visible_tabs.append(gr.update(visible=method in selected_methods))
|
58 |
|
59 |
return visible_tabs
|
@@ -66,14 +66,14 @@ latex_delimiters = [
|
|
66 |
|
67 |
# startup test (also for loading models the first time)
|
68 |
start_startup = time.time()
|
69 |
-
|
70 |
-
|
71 |
|
72 |
-
|
73 |
-
|
74 |
-
|
75 |
-
|
76 |
-
|
77 |
|
78 |
with gr.Blocks(
|
79 |
theme=gr.themes.Ocean(),
|
@@ -84,7 +84,7 @@ with gr.Blocks(
|
|
84 |
output_components = []
|
85 |
output_tabs = []
|
86 |
visualization_sub_tabs = []
|
87 |
-
first_method =
|
88 |
|
89 |
with gr.Row():
|
90 |
with gr.Column(variant="panel", scale=5):
|
@@ -99,7 +99,7 @@ with gr.Blocks(
|
|
99 |
with gr.Column(variant="panel", scale=5):
|
100 |
with gr.Row():
|
101 |
methods = gr.Dropdown(
|
102 |
-
|
103 |
label="Conversion methods",
|
104 |
value=first_method,
|
105 |
multiselect=True,
|
@@ -125,7 +125,7 @@ with gr.Blocks(
|
|
125 |
|
126 |
with gr.Column(variant="panel", scale=5):
|
127 |
with gr.Tabs():
|
128 |
-
for method in
|
129 |
with gr.Tab(method, visible=False) as output_tab:
|
130 |
with gr.Tabs():
|
131 |
with gr.Tab("Markdown rendering"):
|
@@ -162,17 +162,17 @@ with gr.Blocks(
|
|
162 |
inputs=[methods],
|
163 |
outputs=output_tabs,
|
164 |
)
|
165 |
-
for idx, method in enumerate(
|
166 |
|
167 |
def progress_message(selected_methods, method=method):
|
168 |
selected_methods_indices = [
|
169 |
idx
|
170 |
-
for idx, current_method in enumerate(
|
171 |
if current_method in selected_methods
|
172 |
]
|
173 |
try:
|
174 |
current_method_idx = selected_methods_indices.index(
|
175 |
-
|
176 |
)
|
177 |
msg = (
|
178 |
f"Processing ({current_method_idx + 1} / "
|
|
|
53 |
|
54 |
def show_tabs(selected_methods):
|
55 |
visible_tabs = []
|
56 |
+
for method in SUPPORTED_METHODS:
|
57 |
visible_tabs.append(gr.update(visible=method in selected_methods))
|
58 |
|
59 |
return visible_tabs
|
|
|
66 |
|
67 |
# startup test (also for loading models the first time)
|
68 |
start_startup = time.time()
|
69 |
+
WARMUP_PDF_PATH = "/home/tadashi/MinerU/examples/complex_layout.pdf"
|
70 |
+
SUPPORTED_METHODS = ["Docling", "Marker", "Unstructured", "MinerU", "PyMuPDF"]
|
71 |
|
72 |
+
print("Warm-up sequence")
|
73 |
+
for method in SUPPORTED_METHODS:
|
74 |
+
for _ in range(1):
|
75 |
+
convert_document(WARMUP_PDF_PATH, method)
|
76 |
+
print("Start up time", time.time() - start_startup, "seconds")
|
77 |
|
78 |
with gr.Blocks(
|
79 |
theme=gr.themes.Ocean(),
|
|
|
84 |
output_components = []
|
85 |
output_tabs = []
|
86 |
visualization_sub_tabs = []
|
87 |
+
first_method = SUPPORTED_METHODS[0]
|
88 |
|
89 |
with gr.Row():
|
90 |
with gr.Column(variant="panel", scale=5):
|
|
|
99 |
with gr.Column(variant="panel", scale=5):
|
100 |
with gr.Row():
|
101 |
methods = gr.Dropdown(
|
102 |
+
SUPPORTED_METHODS,
|
103 |
label="Conversion methods",
|
104 |
value=first_method,
|
105 |
multiselect=True,
|
|
|
125 |
|
126 |
with gr.Column(variant="panel", scale=5):
|
127 |
with gr.Tabs():
|
128 |
+
for method in SUPPORTED_METHODS:
|
129 |
with gr.Tab(method, visible=False) as output_tab:
|
130 |
with gr.Tabs():
|
131 |
with gr.Tab("Markdown rendering"):
|
|
|
162 |
inputs=[methods],
|
163 |
outputs=output_tabs,
|
164 |
)
|
165 |
+
for idx, method in enumerate(SUPPORTED_METHODS):
|
166 |
|
167 |
def progress_message(selected_methods, method=method):
|
168 |
selected_methods_indices = [
|
169 |
idx
|
170 |
+
for idx, current_method in enumerate(SUPPORTED_METHODS)
|
171 |
if current_method in selected_methods
|
172 |
]
|
173 |
try:
|
174 |
current_method_idx = selected_methods_indices.index(
|
175 |
+
SUPPORTED_METHODS.index(method)
|
176 |
)
|
177 |
msg = (
|
178 |
f"Processing ({current_method_idx + 1} / "
|
backends/docling.py
CHANGED
@@ -42,8 +42,11 @@ def convert_docling(path: str, file_name: str):
|
|
42 |
result = docling_converter.convert(path)
|
43 |
text = result.document.export_to_markdown(image_mode=ImageRefMode.EMBEDDED)
|
44 |
debug_image_dir = DOCLING_DEBUG_PATH / f"debug_{file_name}"
|
45 |
-
|
46 |
-
|
47 |
-
|
|
|
|
|
|
|
48 |
|
49 |
return text, debug_image_paths
|
|
|
42 |
result = docling_converter.convert(path)
|
43 |
text = result.document.export_to_markdown(image_mode=ImageRefMode.EMBEDDED)
|
44 |
debug_image_dir = DOCLING_DEBUG_PATH / f"debug_{file_name}"
|
45 |
+
if debug_image_dir.exists():
|
46 |
+
debug_image_paths = [
|
47 |
+
path for path in debug_image_dir.iterdir() if path.suffix == ".png"
|
48 |
+
]
|
49 |
+
else:
|
50 |
+
debug_image_paths = []
|
51 |
|
52 |
return text, debug_image_paths
|
backends/marker.py
CHANGED
@@ -53,8 +53,11 @@ def convert_marker(path: str, file_name: str):
|
|
53 |
text, _, images = text_from_rendered(rendered)
|
54 |
text = markdown_insert_images(text, images)
|
55 |
debug_image_dir = Path(rendered.metadata.get("debug_data_path"))
|
56 |
-
|
57 |
-
|
58 |
-
|
|
|
|
|
|
|
59 |
|
60 |
return text, debug_image_paths
|
|
|
53 |
text, _, images = text_from_rendered(rendered)
|
54 |
text = markdown_insert_images(text, images)
|
55 |
debug_image_dir = Path(rendered.metadata.get("debug_data_path"))
|
56 |
+
if debug_image_dir.exists():
|
57 |
+
debug_image_paths = [
|
58 |
+
path for path in debug_image_dir.iterdir() if "pdf_page" in path.stem
|
59 |
+
]
|
60 |
+
else:
|
61 |
+
debug_image_paths = []
|
62 |
|
63 |
return text, debug_image_paths
|
backends/mineru.py
CHANGED
@@ -72,11 +72,13 @@ def convert_mineru(path: str, file_name: str):
|
|
72 |
text = replace_image_with_base64(text, local_md_dir)
|
73 |
|
74 |
debug_pdf = str(local_md_dir / (file_name + "_layout.pdf"))
|
75 |
-
|
76 |
-
|
77 |
-
|
78 |
-
|
79 |
-
|
80 |
-
|
|
|
|
|
81 |
|
82 |
return text, debug_image_paths
|
|
|
72 |
text = replace_image_with_base64(text, local_md_dir)
|
73 |
|
74 |
debug_pdf = str(local_md_dir / (file_name + "_layout.pdf"))
|
75 |
+
|
76 |
+
if Path(debug_pdf).exists():
|
77 |
+
doc = pymupdf.open(debug_pdf) # open document
|
78 |
+
for page in doc: # iterate through the pages
|
79 |
+
pix = page.get_pixmap() # render page to an image
|
80 |
+
page_debug_path = str(output_path / ("page-%i.png" % page.number))
|
81 |
+
debug_image_paths.append(page_debug_path)
|
82 |
+
pix.save(page_debug_path) # store image as a PNG
|
83 |
|
84 |
return text, debug_image_paths
|
backends/unstructured.py
CHANGED
@@ -66,8 +66,11 @@ def convert_unstructured(path: str, file_name: str):
|
|
66 |
)
|
67 |
text = convert_elements_to_markdown(elements)
|
68 |
debug_image_dir = UNSTRUCTURED_DEBUG_PATH / "analysis" / file_name / "bboxes"
|
69 |
-
|
70 |
-
|
71 |
-
|
|
|
|
|
|
|
72 |
|
73 |
return text, debug_image_paths
|
|
|
66 |
)
|
67 |
text = convert_elements_to_markdown(elements)
|
68 |
debug_image_dir = UNSTRUCTURED_DEBUG_PATH / "analysis" / file_name / "bboxes"
|
69 |
+
if debug_image_dir.exists():
|
70 |
+
debug_image_paths = [
|
71 |
+
path for path in debug_image_dir.iterdir() if "od_model" in path.stem
|
72 |
+
]
|
73 |
+
else:
|
74 |
+
debug_image_paths = []
|
75 |
|
76 |
return text, debug_image_paths
|
requirements.txt
ADDED
@@ -0,0 +1,20 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
torch>=2.2.2,<=2.3.1
|
2 |
+
torchvision>=0.17.2,<=0.18.1
|
3 |
+
paddlepaddle-gpu @ https://paddle-whl.bj.bcebos.com/stable/cu118/paddlepaddle-gpu/paddlepaddle_gpu-3.0.0b1-cp310-cp310-linux_x86_64.whl
|
4 |
+
detectron2 @ https://wheels-1251341229.cos.ap-shanghai.myqcloud.com/assets/whl/detectron2/detectron2-0.6-cp310-cp310-linux_x86_64.whl
|
5 |
+
paddleocr==2.7.3
|
6 |
+
rapid-table>=1.0.3,<2.0.0
|
7 |
+
rapidocr-paddle
|
8 |
+
rapidocr-onnxruntime
|
9 |
+
gradio-pdf>=0.0.21
|
10 |
+
git+https://github.com/opendatalab/MinerU.git@dev
|
11 |
+
git+https://github.com/VikParuchuri/marker
|
12 |
+
docling
|
13 |
+
PyMuPDF>=1.24.9,<1.24.14
|
14 |
+
pymupdf4llm
|
15 |
+
unstructured[pdf]
|
16 |
+
ultralytics>=8.3.48
|
17 |
+
unimernet==0.2.3
|
18 |
+
transformers<5.0.0,>=4.45.2
|
19 |
+
struct-eqtable==0.3.2
|
20 |
+
openai
|
utils.py
CHANGED
@@ -1,3 +1,4 @@
|
|
|
|
1 |
import re
|
2 |
from pathlib import Path
|
3 |
from shutil import copy2
|
@@ -12,6 +13,7 @@ def remove_images_from_markdown(markdown_text):
|
|
12 |
return markdown_text
|
13 |
|
14 |
|
|
|
15 |
def trim_pages(pdf_path, output_path, trim_pages=5):
|
16 |
doc = pymupdf.open(pdf_path)
|
17 |
parent_dir_name = Path(pdf_path).parent.name
|
|
|
1 |
+
import functools
|
2 |
import re
|
3 |
from pathlib import Path
|
4 |
from shutil import copy2
|
|
|
13 |
return markdown_text
|
14 |
|
15 |
|
16 |
+
@functools.lru_cache(maxsize=None)
|
17 |
def trim_pages(pdf_path, output_path, trim_pages=5):
|
18 |
doc = pymupdf.open(pdf_path)
|
19 |
parent_dir_name = Path(pdf_path).parent.name
|