Commit
·
9e1547d
1
Parent(s):
cfa31cd
Fixed typo in a path
Browse files
notebooks/protac_degradation_predictor.ipynb
CHANGED
@@ -410,7 +410,7 @@
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"from tqdm.auto import tqdm\n",
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"\n",
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"protein_embeddings = {}\n",
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-
"with h5py.File(\"../data/
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" print(f\"number of entries: {len(file.items()):,}\")\n",
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" uniprots = protac_df['Uniprot'].unique().tolist()\n",
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" uniprots += protac_df['E3 Ligase Uniprot'].unique().tolist()\n",
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"from tqdm.auto import tqdm\n",
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"\n",
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"protein_embeddings = {}\n",
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+
"with h5py.File(\"../data/uniprot2embedding.h5\", \"r\") as file:\n",
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" print(f\"number of entries: {len(file.items()):,}\")\n",
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" uniprots = protac_df['Uniprot'].unique().tolist()\n",
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" uniprots += protac_df['E3 Ligase Uniprot'].unique().tolist()\n",
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