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# Copyright 2024 Xi Zhang | |
# | |
# Licensed under the Apache License, Version 2.0 (the "License"); | |
# you may not use this file except in compliance with the License. | |
# You may obtain a copy of the License at | |
# | |
# http://www.apache.org/licenses/LICENSE-2.0 | |
# | |
# Unless required by applicable law or agreed to in writing, software | |
# distributed under the License is distributed on an "AS IS" BASIS, | |
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | |
# See the License for the specific language governing permissions and | |
# limitations under the License. | |
import os | |
import copy | |
import numpy as np | |
from dataclasses import dataclass, field | |
import json | |
import logging | |
import pathlib | |
from typing import Dict, Optional, Sequence, List, Union | |
import random | |
import torch | |
import shutil | |
import evaluate | |
import transformers | |
import tokenizers | |
from transformers import EvalPrediction, TrainerCallback | |
from libra.constants import IGNORE_INDEX, IMAGE_TOKEN_INDEX, DEFAULT_IMAGE_TOKEN, DEFAULT_IM_START_TOKEN, DEFAULT_IM_END_TOKEN | |
from torch.utils.data import Dataset | |
from libra.train.libra_trainer import LibraTrainer | |
from libra import conversation as conversation_lib | |
from libra.model import * | |
from libra.mm_utils import tokenizer_image_token | |
from libra.eval import temporal_f1_score | |
from PIL import Image | |
import pydicom | |
from pydicom.pixel_data_handlers.util import apply_voi_lut | |
local_rank = None | |
def rank0_print(*args): | |
if local_rank == 0: | |
print(*args) | |
from packaging import version | |
IS_TOKENIZER_GREATER_THAN_0_14 = version.parse(tokenizers.__version__) >= version.parse('0.14') | |
class ModelArguments: | |
model_name_or_path: Optional[str] = field(default="libra") | |
version: Optional[str] = field(default="libra_v1") | |
freeze_backbone: bool = field(default=False) | |
tune_mm_mlp_adapter: bool = field(default=False) | |
vision_tower: Optional[str] = field(default=None) | |
mm_vision_select_layer: Optional[Union[int, str]] = field( | |
default=-1, | |
metadata={"help": "Select specific vision layer (e.g., -1, -2) or 'all' for all layers."} | |
) | |
pretrain_mm_mlp_adapter: Optional[str] = field(default=None) | |
mm_projector_type: Optional[str] = field(default='linear') | |
mm_use_im_start_end: bool = field(default=False) | |
mm_use_im_patch_token: bool = field(default=True) | |
mm_vision_select_feature: Optional[str] = field( | |
default="patch", | |
metadata={"help": "Select feature type: 'patch' or 'cls_patch'."} | |
) | |
compute_metrics: bool = field( | |
default=False, | |
metadata={"help": "Optional callable for computing metrics during evaluation during training."} | |
) | |
class DataArguments: | |
data_path: str = field(default=None, | |
metadata={"help": "Path to the training data."}) | |
lazy_preprocess: bool = False | |
is_multimodal: bool = False | |
image_folder: Optional[str] = field(default=None) | |
image_aspect_ratio: str = 'square' | |
validation_data_path: Optional[str] = field( | |
default=None, | |
metadata={"help": "Path to the validation data."} | |
) | |
class TrainingArguments(transformers.TrainingArguments): | |
cache_dir: Optional[str] = field(default=None) | |
optim: str = field(default="adamw_torch") | |
remove_unused_columns: bool = field(default=False) | |
freeze_mm_mlp_adapter: bool = field(default=False) | |
mpt_attn_impl: Optional[str] = field(default="triton") | |
model_max_length: int = field( | |
default=512, | |
metadata={ | |
"help": | |
"Maximum sequence length. Sequences will be right padded (and possibly truncated)." | |
}, | |
) | |
double_quant: bool = field( | |
default=True, | |
metadata={"help": "Compress the quantization statistics through double quantization."} | |
) | |
quant_type: str = field( | |
default="nf4", | |
metadata={"help": "Quantization data type to use. Should be one of `fp4` or `nf4`."} | |
) | |
bits: int = field( | |
default=16, | |
metadata={"help": "How many bits to use."} | |
) | |
lora_enable: bool = False | |
lora_r: int = 64 | |
lora_alpha: int = 16 | |
lora_dropout: float = 0.05 | |
lora_weight_path: str = "" | |
lora_bias: str = "none" | |
mm_projector_lr: Optional[float] = None | |
group_by_modality_length: bool = field(default=False) | |
def maybe_zero_3(param, ignore_status=False, name=None): | |
from deepspeed import zero | |
from deepspeed.runtime.zero.partition_parameters import ZeroParamStatus | |
if hasattr(param, "ds_id"): | |
if param.ds_status == ZeroParamStatus.NOT_AVAILABLE: | |
if not ignore_status: | |
logging.warning(f"{name}: param.ds_status != ZeroParamStatus.NOT_AVAILABLE: {param.ds_status}") | |
with zero.GatheredParameters([param]): | |
param = param.data.detach().cpu().clone() | |
else: | |
param = param.detach().cpu().clone() | |
return param | |
# Borrowed from peft.utils.get_peft_model_state_dict | |
def get_peft_state_maybe_zero_3(named_params, bias): | |
if bias == "none": | |
to_return = {k: t for k, t in named_params if "lora_" in k} | |
elif bias == "all": | |
to_return = {k: t for k, t in named_params if "lora_" in k or "bias" in k} | |
elif bias == "lora_only": | |
to_return = {} | |
maybe_lora_bias = {} | |
lora_bias_names = set() | |
for k, t in named_params: | |
if "lora_" in k: | |
to_return[k] = t | |
bias_name = k.split("lora_")[0] + "bias" | |
lora_bias_names.add(bias_name) | |
elif "bias" in k: | |
maybe_lora_bias[k] = t | |
for k, t in maybe_lora_bias: | |
if bias_name in lora_bias_names: | |
to_return[bias_name] = t | |
else: | |
raise NotImplementedError | |
to_return = {k: maybe_zero_3(v, ignore_status=True) for k, v in to_return.items()} | |
return to_return | |
def get_peft_state_non_lora_maybe_zero_3(named_params, require_grad_only=True): | |
to_return = {k: t for k, t in named_params if "lora_" not in k} | |
if require_grad_only: | |
to_return = {k: t for k, t in to_return.items() if t.requires_grad} | |
to_return = {k: maybe_zero_3(v, ignore_status=True).cpu() for k, v in to_return.items()} | |
return to_return | |
def get_non_vision_tower_state_maybe_zero_3(named_params): | |
to_return = {k: t for k, t in named_params if "vision_tower" not in k} | |
to_return = {k: maybe_zero_3(v, ignore_status=True).cpu() for k, v in to_return.items()} | |
return to_return | |
def get_mm_adapter_state_maybe_zero_3(named_params, keys_to_match): | |
to_return = {k: t for k, t in named_params if any(key_match in k for key_match in keys_to_match)} | |
to_return = {k: maybe_zero_3(v, ignore_status=True).cpu() for k, v in to_return.items()} | |
return to_return | |
def find_all_linear_names(model): | |
cls = torch.nn.Linear | |
lora_module_names = set() | |
multimodal_keywords = ['mm_projector', 'vision_tower', 'vision_resampler'] | |
for name, module in model.named_modules(): | |
if any(mm_keyword in name for mm_keyword in multimodal_keywords): | |
continue | |
if isinstance(module, cls): | |
names = name.split('.') | |
lora_module_names.add(names[0] if len(names) == 1 else names[-1]) | |
if 'lm_head' in lora_module_names: # needed for 16-bit | |
lora_module_names.remove('lm_head') | |
return list(lora_module_names) | |
def safe_save_model_for_hf_trainer(trainer: transformers.Trainer, | |
output_dir: str): | |
"""Collects the state dict and dump to disk.""" | |
if getattr(trainer.args, "tune_mm_mlp_adapter", False): | |
# Only save Adapter | |
keys_to_match = ['mm_projector'] | |
if getattr(trainer.args, "use_im_start_end", False): | |
keys_to_match.extend(['embed_tokens', 'embed_in']) | |
weight_to_save = get_mm_adapter_state_maybe_zero_3(trainer.model.named_parameters(), keys_to_match) | |
trainer.model.config.save_pretrained(output_dir) | |
current_folder = output_dir.split('/')[-1] | |
parent_folder = os.path.dirname(output_dir) | |
if trainer.args.local_rank == 0 or trainer.args.local_rank == -1: | |
if current_folder.startswith('checkpoint-'): | |
mm_projector_folder = os.path.join(parent_folder, "mm_projector") | |
os.makedirs(mm_projector_folder, exist_ok=True) | |
torch.save(weight_to_save, os.path.join(mm_projector_folder, f'{current_folder}.bin')) | |
else: | |
torch.save(weight_to_save, os.path.join(output_dir, f'mm_projector.bin')) | |
return | |
if trainer.deepspeed: | |
torch.cuda.synchronize() | |
trainer.save_model(output_dir) | |
return | |
state_dict = trainer.model.state_dict() | |
if trainer.args.should_save: | |
cpu_state_dict = { | |
key: value.cpu() | |
for key, value in state_dict.items() | |
} | |
del state_dict | |
trainer._save(output_dir, state_dict=cpu_state_dict) | |
def smart_tokenizer_and_embedding_resize( | |
special_tokens_dict: Dict, | |
tokenizer: transformers.PreTrainedTokenizer, | |
model: transformers.PreTrainedModel, | |
): | |
"""Resize tokenizer and embedding. You can add some new tokens <video> etc | |
Note: This is the unoptimized version that may make your embedding size not be divisible by 64. | |
""" | |
num_new_tokens = tokenizer.add_special_tokens(special_tokens_dict) | |
model.resize_token_embeddings(len(tokenizer)) | |
if num_new_tokens > 0: | |
input_embeddings = model.get_input_embeddings().weight.data | |
output_embeddings = model.get_output_embeddings().weight.data | |
input_embeddings_avg = input_embeddings[:-num_new_tokens].mean( | |
dim=0, keepdim=True) | |
output_embeddings_avg = output_embeddings[:-num_new_tokens].mean( | |
dim=0, keepdim=True) | |
input_embeddings[-num_new_tokens:] = input_embeddings_avg | |
output_embeddings[-num_new_tokens:] = output_embeddings_avg | |
def _tokenize_fn(strings: Sequence[str], | |
tokenizer: transformers.PreTrainedTokenizer) -> Dict: | |
""" | |
Tokenizes a list of input strings and returns tokenized results along with sequence lengths. | |
""" | |
tokenized_list = [ | |
tokenizer( | |
text, | |
return_tensors="pt", | |
padding="longest", | |
max_length=tokenizer.model_max_length, | |
truncation=True, | |
) for text in strings | |
] | |
input_ids = labels = [ | |
tokenized.input_ids[0] for tokenized in tokenized_list | |
] | |
input_ids_lens = labels_lens = [ | |
tokenized.input_ids.ne(tokenizer.pad_token_id).sum().item() | |
for tokenized in tokenized_list | |
] | |
return dict( | |
input_ids=input_ids, | |
labels=labels, | |
input_ids_lens=input_ids_lens, | |
labels_lens=labels_lens, | |
) | |
def _mask_targets(target, tokenized_lens, speakers): | |
# cur_idx = 0 | |
cur_idx = tokenized_lens[0] | |
tokenized_lens = tokenized_lens[1:] | |
target[:cur_idx] = IGNORE_INDEX | |
for tokenized_len, speaker in zip(tokenized_lens, speakers): | |
if speaker == "human": | |
target[cur_idx+2:cur_idx + tokenized_len] = IGNORE_INDEX | |
cur_idx += tokenized_len | |
def _add_speaker_and_signal(header, source, get_conversation=True): | |
"""Add speaker and start/end signal on each round.""" | |
BEGIN_SIGNAL = "### " | |
END_SIGNAL = "\n" | |
conversation = header | |
for sentence in source: | |
from_str = sentence["from"] | |
if from_str.lower() == "human": | |
from_str = conversation_lib.default_conversation.roles[0] | |
elif from_str.lower() == "gpt": | |
from_str = conversation_lib.default_conversation.roles[1] | |
else: | |
from_str = 'unknown' | |
sentence["value"] = (BEGIN_SIGNAL + from_str + ": " + | |
sentence["value"] + END_SIGNAL) | |
if get_conversation: | |
conversation += sentence["value"] | |
conversation += BEGIN_SIGNAL | |
return conversation | |
def preprocess_multimodal( | |
sources: Sequence[str], | |
data_args: DataArguments | |
) -> Dict: | |
is_multimodal = data_args.is_multimodal | |
if not is_multimodal: | |
return sources | |
for source in sources: | |
for sentence in source: | |
if DEFAULT_IMAGE_TOKEN in sentence['value']: | |
sentence['value'] = sentence['value'].replace(DEFAULT_IMAGE_TOKEN, '').strip() | |
sentence['value'] = DEFAULT_IMAGE_TOKEN + '\n' + sentence['value'] | |
sentence['value'] = sentence['value'].strip() | |
if "mmtag" in conversation_lib.default_conversation.version: | |
sentence['value'] = sentence['value'].replace(DEFAULT_IMAGE_TOKEN, '<Image>' + DEFAULT_IMAGE_TOKEN + '</Image>') | |
replace_token = DEFAULT_IMAGE_TOKEN | |
if data_args.mm_use_im_start_end: | |
replace_token = DEFAULT_IM_START_TOKEN + replace_token + DEFAULT_IM_END_TOKEN | |
sentence["value"] = sentence["value"].replace(DEFAULT_IMAGE_TOKEN, replace_token) | |
return sources | |
def preprocess_llama_2( | |
sources, | |
tokenizer: transformers.PreTrainedTokenizer, | |
has_image: bool = False | |
) -> Dict: | |
conv = conversation_lib.default_conversation.copy() | |
roles = {"human": conv.roles[0], "gpt": conv.roles[1]} | |
# Apply prompt templates | |
conversations = [] | |
for i, source in enumerate(sources): | |
if roles[source[0]["from"]] != conv.roles[0]: | |
# Skip the first one if it is not from human | |
source = source[1:] | |
conv.messages = [] | |
for j, sentence in enumerate(source): | |
role = roles[sentence["from"]] | |
assert role == conv.roles[j % 2], f"{i}" | |
conv.append_message(role, sentence["value"]) | |
conversations.append(conv.get_prompt()) | |
# Tokenize conversations | |
if has_image: | |
input_ids = torch.stack([tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0) | |
else: | |
input_ids = tokenizer( | |
conversations, | |
return_tensors="pt", | |
padding="longest", | |
max_length=tokenizer.model_max_length, | |
truncation=True, | |
).input_ids | |
targets = input_ids.clone() | |
assert conv.sep_style == conversation_lib.SeparatorStyle.LLAMA_2 | |
# Mask targets | |
sep = "[/INST] " | |
for conversation, target in zip(conversations, targets): | |
total_len = int(target.ne(tokenizer.pad_token_id).sum()) | |
rounds = conversation.split(conv.sep2) | |
cur_len = 1 | |
target[:cur_len] = IGNORE_INDEX | |
for i, rou in enumerate(rounds): | |
if rou == "": | |
break | |
parts = rou.split(sep) | |
if len(parts) != 2: | |
break | |
parts[0] += sep | |
if has_image: | |
round_len = len(tokenizer_image_token(rou, tokenizer)) | |
instruction_len = len(tokenizer_image_token(parts[0], tokenizer)) - 2 | |
else: | |
round_len = len(tokenizer(rou).input_ids) | |
instruction_len = len(tokenizer(parts[0]).input_ids) - 2 | |
target[cur_len : cur_len + instruction_len] = IGNORE_INDEX | |
cur_len += round_len | |
target[cur_len:] = IGNORE_INDEX | |
if cur_len < tokenizer.model_max_length: | |
if cur_len != total_len: | |
target[:] = IGNORE_INDEX | |
print( | |
f"WARNING: tokenization mismatch: {cur_len} vs. {total_len}." | |
f" (ignored)" | |
) | |
return dict( | |
input_ids=input_ids, | |
labels=targets, | |
) | |
# llama_3 | |
def preprocess_llama_3( | |
sources, | |
tokenizer: transformers.PreTrainedTokenizer, | |
has_image: bool = False | |
) -> Dict: | |
special_token = "<|finetune_right_pad_id|>" | |
if tokenizer.pad_token_id is None: | |
pad_token_id = tokenizer.convert_tokens_to_ids(special_token) | |
if pad_token_id is None: | |
raise ValueError(f"Cannot find ID for {special_token}. Please check the tokenizer.") | |
tokenizer.pad_token_id = pad_token_id | |
conv = conversation_lib.default_conversation.copy() | |
roles = {"human": conv.roles[0], "gpt": conv.roles[1]} | |
# Apply prompt templates | |
conversations = [] | |
for i, source in enumerate(sources): | |
if roles[source[0]["from"]] != conv.roles[0]: | |
# Skip the first one if it is not from human | |
source = source[1:] | |
conv.messages = [] | |
for j, sentence in enumerate(source): | |
role = roles[sentence["from"]] | |
assert role == conv.roles[j % 2], f"{i}" | |
conv.append_message(role, sentence["value"]) | |
conversations.append(conv.get_prompt()) | |
if has_image: | |
input_ids = torch.stack([tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0) | |
else: | |
input_ids = tokenizer( | |
conversations, | |
return_tensors="pt", | |
padding="longest", | |
max_length=tokenizer.model_max_length, | |
truncation=True, | |
).input_ids | |
targets = input_ids.clone() | |
assert conv.sep_style == conversation_lib.SeparatorStyle.LLAMA_3 | |
sep_round = "<|eot_id|>\n<|start_header_id|>user<|end_header_id|>" | |
sep_user = "<|eot_id|>\n<|start_header_id|>assistant<|end_header_id|>\n\n" | |
for conversation, target in zip(conversations, targets): | |
total_len = int(target.ne(tokenizer.pad_token_id).sum()) | |
rounds = conversation.split(sep_round) | |
cur_len = 1 | |
target[:cur_len] = IGNORE_INDEX | |
for i, rou in enumerate(rounds): | |
if rou == "": | |
break | |
parts = rou.split(sep_user) | |
if len(parts) != 2: | |
break | |
parts[0] += sep_user | |
if has_image: | |
round_len = len(tokenizer_image_token(rou, tokenizer)) - 1 | |
instruction_len = len(tokenizer_image_token(parts[0], tokenizer)) - 1 | |
else: | |
round_len = len(tokenizer(rou).input_ids) - 1 | |
instruction_len = len(tokenizer(parts[0]).input_ids) - 1 | |
target[cur_len : cur_len + instruction_len] = IGNORE_INDEX | |
cur_len += round_len | |
target[cur_len:] = IGNORE_INDEX | |
if cur_len < tokenizer.model_max_length: | |
if cur_len != total_len: | |
target[:] = IGNORE_INDEX | |
print( | |
f"WARNING: tokenization mismatch: {cur_len} vs. {total_len}." | |
f" (ignored)" | |
) | |
return dict( | |
input_ids=input_ids, | |
labels=targets, | |
) | |
def preprocess_libra( | |
sources, | |
tokenizer: transformers.PreTrainedTokenizer, | |
has_image: bool = False | |
) -> Dict: | |
conv = conversation_lib.default_conversation.copy() | |
roles = {"human": conv.roles[0], "gpt": conv.roles[1]} | |
# Apply prompt templates | |
conversations = [] | |
for i, source in enumerate(sources): | |
if roles[source[0]["from"]] != conv.roles[0]: | |
# Skip the first one if it is not from human | |
source = source[1:] | |
conv.messages = [] | |
for j, sentence in enumerate(source): | |
role = roles[sentence["from"]] | |
assert role == conv.roles[j % 2], f"{i}" | |
conv.append_message(role, sentence["value"]) | |
conversations.append(conv.get_prompt()) | |
# Tokenize conversations | |
if has_image: | |
input_ids = torch.stack([tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0) | |
else: | |
input_ids = tokenizer( | |
conversations, | |
return_tensors="pt", | |
padding="longest", | |
max_length=tokenizer.model_max_length, | |
truncation=True, | |
).input_ids | |
targets = input_ids.clone() | |
assert conv.sep_style == conversation_lib.SeparatorStyle.TWO | |
# Mask targets | |
sep = conv.sep + conv.roles[1] + ": " | |
for conversation, target in zip(conversations, targets): | |
total_len = int(target.ne(tokenizer.pad_token_id).sum()) | |
rounds = conversation.split(conv.sep2) | |
cur_len = 1 | |
target[:cur_len] = IGNORE_INDEX | |
for i, rou in enumerate(rounds): | |
if rou == "": | |
break | |
parts = rou.split(sep) | |
if len(parts) != 2: | |
break | |
parts[0] += sep | |
if has_image: | |
round_len = len(tokenizer_image_token(rou, tokenizer)) | |
instruction_len = len(tokenizer_image_token(parts[0], tokenizer)) - 2 | |
else: | |
round_len = len(tokenizer(rou).input_ids) | |
instruction_len = len(tokenizer(parts[0]).input_ids) - 2 | |
if i != 0 and not tokenizer.legacy and IS_TOKENIZER_GREATER_THAN_0_14: | |
round_len -= 1 | |
instruction_len -= 1 | |
target[cur_len : cur_len + instruction_len] = IGNORE_INDEX | |
cur_len += round_len | |
target[cur_len:] = IGNORE_INDEX | |
if cur_len < tokenizer.model_max_length: | |
if cur_len != total_len: | |
target[:] = IGNORE_INDEX | |
print( | |
f"WARNING: tokenization mismatch: {cur_len} vs. {total_len}." | |
f" (ignored)" | |
) | |
return dict( | |
input_ids=input_ids, | |
labels=targets, | |
) | |
def preprocess_mpt( | |
sources, | |
tokenizer: transformers.PreTrainedTokenizer, | |
has_image: bool = False | |
) -> Dict: | |
conv = conversation_lib.default_conversation.copy() | |
roles = {"human": conv.roles[0], "gpt": conv.roles[1]} | |
# Apply prompt templates | |
conversations = [] | |
for i, source in enumerate(sources): | |
if roles[source[0]["from"]] != conv.roles[0]: | |
# Skip the first one if it is not from human | |
source = source[1:] | |
conv.messages = [] | |
for j, sentence in enumerate(source): | |
role = roles[sentence["from"]] | |
assert role == conv.roles[j % 2], f"{i}" | |
conv.append_message(role, sentence["value"]) | |
conversations.append(conv.get_prompt()) | |
# Tokenize conversations | |
if has_image: | |
input_ids = torch.stack([tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0) | |
else: | |
input_ids = tokenizer( | |
conversations, | |
return_tensors="pt", | |
padding="longest", | |
max_length=tokenizer.model_max_length, | |
truncation=True, | |
).input_ids | |
targets = input_ids.clone() | |
assert conv.sep_style == conversation_lib.SeparatorStyle.MPT | |
# Mask targets | |
sep = conv.sep + conv.roles[1] | |
for conversation, target in zip(conversations, targets): | |
total_len = int(target.ne(tokenizer.pad_token_id).sum()) | |
rounds = conversation.split(conv.sep) | |
re_rounds = [conv.sep.join(rounds[:3])] # system + user + gpt | |
for conv_idx in range(3, len(rounds), 2): | |
re_rounds.append(conv.sep.join(rounds[conv_idx:conv_idx+2])) # user + gpt | |
cur_len = 0 | |
target[:cur_len] = IGNORE_INDEX | |
for i, rou in enumerate(re_rounds): | |
if rou == "": | |
break | |
parts = rou.split(sep) | |
if len(parts) != 2: | |
break | |
parts[0] += sep | |
if has_image: | |
round_len = len(tokenizer_image_token(rou, tokenizer)) | |
instruction_len = len(tokenizer_image_token(parts[0], tokenizer)) - 1 | |
else: | |
round_len = len(tokenizer(rou).input_ids) | |
instruction_len = len(tokenizer(parts[0]).input_ids) - 1 | |
if i != 0 and getattr(tokenizer, 'legacy', False) and IS_TOKENIZER_GREATER_THAN_0_14: | |
round_len += 1 | |
instruction_len += 1 | |
target[cur_len : cur_len + instruction_len] = IGNORE_INDEX | |
cur_len += round_len | |
target[cur_len:] = IGNORE_INDEX | |
if cur_len < tokenizer.model_max_length: | |
if cur_len != total_len: | |
target[:] = IGNORE_INDEX | |
print( | |
f"WARNING: tokenization mismatch: {cur_len} vs. {total_len}." | |
f" (ignored)" | |
) | |
return dict( | |
input_ids=input_ids, | |
labels=targets, | |
) | |
def preprocess_plain( | |
sources: Sequence[str], | |
tokenizer: transformers.PreTrainedTokenizer, | |
) -> Dict: | |
# add end signal and concatenate together | |
conversations = [] | |
for source in sources: | |
assert len(source) == 2 | |
assert DEFAULT_IMAGE_TOKEN in source[0]['value'] | |
source[0]['value'] = DEFAULT_IMAGE_TOKEN | |
conversation = source[0]['value'] + source[1]['value'] + conversation_lib.default_conversation.sep | |
conversations.append(conversation) | |
# tokenize conversations | |
input_ids = [tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations] | |
targets = copy.deepcopy(input_ids) | |
for target, source in zip(targets, sources): | |
tokenized_len = len(tokenizer_image_token(source[0]['value'], tokenizer)) | |
target[:tokenized_len] = IGNORE_INDEX | |
return dict(input_ids=input_ids, labels=targets) | |
def load_images(image_file): | |
""" | |
Load an image from a local file, a URL, or a DICOM file. | |
Args: | |
image_file (str): The path or URL of the image file to load. | |
Returns: | |
PIL.Image.Image: The loaded image in RGB format. | |
Raises: | |
ValueError: If the DICOM file does not contain image data. | |
TypeError: If the input is neither a valid file path nor a URL. | |
""" | |
if isinstance(image_file, str): | |
# Case 1: Load from URL | |
if image_file.startswith(('http://', 'https://')): | |
try: | |
response = requests.get(image_file) | |
response.raise_for_status() | |
image = Image.open(BytesIO(response.content)).convert('RGB') | |
except Exception as e: | |
raise ValueError(f"Error loading image from URL: {image_file}\n{e}") | |
# Case 2: Load from DICOM file | |
elif image_file.lower().endswith('.dcm'): | |
try: | |
dicom = pydicom.dcmread(image_file) | |
if 'PixelData' in dicom: | |
data = apply_voi_lut(dicom.pixel_array, dicom) | |
# Handle MONOCHROME1 images | |
if dicom.PhotometricInterpretation == "MONOCHROME1": | |
data = np.max(data) - data | |
# Normalize the image data | |
data = data - np.min(data) | |
data = data / np.max(data) | |
data = (data * 255).astype(np.uint8) | |
# Convert to 3-channel RGB if necessary | |
if data.ndim == 2: | |
data = np.stack([data] * 3, axis=-1) | |
image = Image.fromarray(data).convert('RGB') | |
else: | |
raise ValueError("DICOM file does not contain image data") | |
except Exception as e: | |
raise ValueError(f"Error loading DICOM file: {image_file}\n{e}") | |
# Case 3: Load standard image files (e.g., PNG, JPG) | |
else: | |
try: | |
image = Image.open(image_file).convert('RGB') | |
except Exception as e: | |
raise ValueError(f"Error loading standard image file: {image_file}\n{e}") | |
else: | |
raise TypeError("image_file must be a string representing a file path or URL") | |
return image | |
def preprocess( | |
sources: Sequence[str], | |
tokenizer: transformers.PreTrainedTokenizer, | |
has_image: bool = False | |
) -> Dict: | |
""" | |
Given a list of sources, each is a conversation list. This transform: | |
1. Add signal '### ' at the beginning each sentence, with end signal '\n'; | |
2. Concatenate conversations together; | |
3. Tokenize the concatenated conversation; | |
4. Make a deepcopy as the target. Mask human words with IGNORE_INDEX. | |
""" | |
if conversation_lib.default_conversation.sep_style == conversation_lib.SeparatorStyle.PLAIN: | |
return preprocess_plain(sources, tokenizer) | |
if conversation_lib.default_conversation.sep_style == conversation_lib.SeparatorStyle.LLAMA_2: | |
return preprocess_llama_2(sources, tokenizer, has_image=has_image) | |
if conversation_lib.default_conversation.sep_style == conversation_lib.SeparatorStyle.LLAMA_3: | |
return preprocess_llama_3(sources, tokenizer, has_image=has_image) | |
if conversation_lib.default_conversation.version.startswith("v1"): | |
return preprocess_libra(sources, tokenizer, has_image=has_image) | |
if conversation_lib.default_conversation.version == "mpt": | |
return preprocess_mpt(sources, tokenizer) | |
conversations = [] | |
for source in sources: | |
header = f"{conversation_lib.default_conversation.system}\n\n" | |
conversation = _add_speaker_and_signal(header, source) | |
conversations.append(conversation) | |
# tokenize conversations | |
def get_tokenize_len(prompts): | |
return [len(tokenizer_image_token(prompt, tokenizer)) for prompt in prompts] | |
if has_image: | |
input_ids = [tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations] | |
else: | |
conversations_tokenized = _tokenize_fn(conversations, tokenizer) | |
input_ids = conversations_tokenized["input_ids"] | |
targets = copy.deepcopy(input_ids) | |
for target, source in zip(targets, sources): | |
if has_image: | |
tokenized_lens = get_tokenize_len([header] + [s["value"] for s in source]) | |
else: | |
tokenized_lens = _tokenize_fn([header] + [s["value"] for s in source], tokenizer)["input_ids_lens"] | |
speakers = [sentence["from"] for sentence in source] | |
_mask_targets(target, tokenized_lens, speakers) | |
return dict(input_ids=input_ids, labels=targets) | |
def create_compute_metrics(tokenizer, num_patches: int, sep2: str): | |
""" | |
Creates a function to compute evaluation metrics (e.g., BLEU, ROUGE-L, Temple-F1) for the model. | |
based on the given tokenizer and 'num_patches' parameter. | |
Args: | |
tokenizer: The tokenizer used for encoding/decoding text. | |
num_patches (int): The number of patches to be adjusted in the labels. | |
sep2 (str): A separator token used to identify a special token ID. | |
Returns: | |
A callable function 'compute_metrics(eval_pred)' that computes evaluation metrics. | |
""" | |
# Pre-fetch special token IDs to avoid repeated calls | |
bos_token_id = tokenizer.convert_tokens_to_ids(sep2) | |
newline_token_id = tokenizer.convert_tokens_to_ids('<0x0A>') | |
# 0 is commonly used as the <pad> token ID | |
special_token_ids = [bos_token_id, newline_token_id, 0] | |
# Pre-load evaluation metrics (adjust if needed for your scenario) | |
bleu_metric = evaluate.load("bleu") | |
rouge_metric = evaluate.load("rouge") | |
def compute_metrics(eval_pred: EvalPrediction) -> dict: | |
""" | |
Compute various evaluation metrics including BLEU, ROUGE, F1 for RadGraph and CheXbert, and BERTScore. | |
Args: | |
eval_pred (EvalPrediction): Contains model predictions and true labels. | |
Returns: | |
dict: Dictionary containing evaluation metric scores. | |
""" | |
logits, labels = eval_pred.predictions, eval_pred.label_ids | |
predicted_ids = np.argmax(logits, axis=-1) | |
# Store processed predicted token IDs | |
processed_predicted_ids = [] | |
for label, predicted in zip(labels, predicted_ids): | |
# (1) Find ignore_count: the position of the first non-IGNORE_INDEX token in the label | |
ignore_count = next( | |
(i for i, token in enumerate(label) if token != IGNORE_INDEX), | |
len(label) # If all are -100, use the length of the label | |
) | |
# (2) Calculate the truncation start index | |
# This depends on 'num_patches' and the ignored tokens. | |
start_index = ignore_count + num_patches - 2 | |
# If start_index exceeds the predicted sequence length, append an empty list | |
if start_index >= len(predicted): | |
processed_predicted_ids.append([]) | |
continue | |
# (3) Slice the prediction from 'start_index' onwards | |
temp_predicted = predicted[start_index:] | |
# (4) Find the earliest occurrence of any special token to truncate | |
matching_indices = [] | |
for token_id in special_token_ids: | |
idx = np.where(temp_predicted == token_id)[0] | |
if idx.size > 0: | |
matching_indices.append(idx) | |
if matching_indices: | |
# Merge all matching indices and take the smallest | |
all_indices = np.concatenate(matching_indices) | |
first_match_index = np.min(all_indices) | |
# Truncate up to the first special token | |
temp_predicted = temp_predicted[:first_match_index] | |
# Append the processed sequence to the results | |
processed_predicted_ids.append(temp_predicted) | |
# Decode the processed prediction IDs | |
decoded_preds = tokenizer.batch_decode( | |
processed_predicted_ids, | |
skip_special_tokens=True | |
) | |
# Filter labels by removing IGNORE_INDEX tokens | |
filtered_labels = [ | |
[token for token in label_group if token != IGNORE_INDEX] | |
for label_group in labels | |
] | |
decoded_labels = tokenizer.batch_decode( | |
filtered_labels, | |
skip_special_tokens=True | |
) | |
references = [[lbl] for lbl in decoded_labels] | |
# Calculate BLEU score | |
bleu_score = bleu_metric.compute( | |
predictions=decoded_preds, | |
references=references, | |
max_order=4 | |
)["bleu"] | |
# Calculate ROUGE-L score | |
rouge_score = rouge_metric.compute( | |
predictions=decoded_preds, | |
references=references | |
)["rougeL"] | |
# Calculate Temporal-F1 score | |
tem_f1_score = temporal_f1_score( | |
predictions=decoded_preds, | |
references=references | |
)["f1"] | |
# Clean up memory | |
del logits, labels, decoded_preds, decoded_labels, references | |
torch.cuda.empty_cache() | |
# Return metrics | |
return { | |
"BLEU4": bleu_score, | |
"ROUGE-L": rouge_score, | |
"TEM-F1": tem_f1_score | |
} | |
return compute_metrics | |
def check_trainable_parameters(model: torch.nn.Module) -> None: | |
""" | |
Print the names, shapes, and data types of all trainable parameters in the model. | |
Args: | |
model (torch.nn.Module): The model to inspect. | |
""" | |
total_params = sum( | |
p.numel() for p in model.parameters() if p.requires_grad | |
) | |
print(f"Total number of trainable parameters: {total_params:,d}\n") | |
# (Optional) Print the model structure for reference | |
print("Overall model structure:") | |
print(model) | |
print("\nTrainable parameters:") | |
# Print details of each trainable parameter | |
for name, param in model.named_parameters(): | |
if param.requires_grad: | |
param_info = ( | |
f"Shape: {list(param.shape)}, " | |
f"Dtype: {param.dtype}" | |
) | |
print(f" - {name} -> {param_info}") | |
class LazySupervisedDataset(Dataset): | |
"""Dataset for supervised fine-tuning.""" | |
def __init__(self, data_path: str, | |
tokenizer: transformers.PreTrainedTokenizer, | |
data_args: DataArguments, | |
sample_rate=1.0): | |
super(LazySupervisedDataset, self).__init__() | |
list_data_dict = json.load(open(data_path, "r")) | |
# Apply sampling if sample_rate < 1.0 | |
if 0 < sample_rate < 1.0: | |
random.seed(27) # Fixed seed for consistent behavior across different runs | |
sampled_size = int(len(list_data_dict) * sample_rate) | |
list_data_dict = random.sample(list_data_dict, sampled_size) | |
rank0_print("Formatting inputs...Skip in lazy mode") | |
self.tokenizer = tokenizer | |
self.list_data_dict = list_data_dict | |
self.data_args = data_args | |
def __len__(self): | |
return len(self.list_data_dict) | |
def lengths(self): | |
length_list = [] | |
for sample in self.list_data_dict: | |
img_tokens = 128 if 'image' in sample else 0 | |
length_list.append(sum(len(conv['value'].split()) for conv in sample['conversations']) + img_tokens) | |
return length_list | |
def modality_lengths(self): | |
length_list = [] | |
for sample in self.list_data_dict: | |
cur_len = sum(len(conv['value'].split()) for conv in sample['conversations']) | |
cur_len = cur_len if 'image' in sample else -cur_len | |
length_list.append(cur_len) | |
return length_list | |
def __getitem__(self, i) -> Dict[str, torch.Tensor]: | |
sources = self.list_data_dict[i] | |
if isinstance(i, int): | |
sources = [sources] | |
assert len(sources) == 1, "Don't know why it is wrapped to a list" # FIXME | |
if 'image' in sources[0]: | |
image_file = self.list_data_dict[i]['image'] | |
image_folder = self.data_args.image_folder | |
processor = self.data_args.image_processor | |
if isinstance(image_file, str): | |
image=[] | |
image_path = os.path.join(image_folder, image_file) | |
img = load_images(image_path) | |
image.append(img) | |
# set dummy prior image | |
image.append(img) | |
elif isinstance(image_file, (list, tuple)): | |
image=[] | |
image_paths = [os.path.join(image_folder, file_name) for file_name in image_file] | |
for path in image_paths: | |
img = load_images(path) | |
image.append(img) | |
# set dummy prior image | |
if len(image) == 1: | |
print("Contains only current image. Adding a dummy prior image.") | |
image.append(image[0]) | |
else: | |
raise TypeError("image_file must be a string or a list/tuple of strings") | |
if self.data_args.image_aspect_ratio == 'pad': | |
def expand2square(pil_img, background_color=(0, 0, 0)): | |
width, height = pil_img.size | |
if width == height: | |
return pil_img | |
elif width > height: | |
result = Image.new(pil_img.mode, (width, width), background_color) | |
result.paste(pil_img, (0, (width - height) // 2)) | |
return result | |
else: | |
result = Image.new(pil_img.mode, (height, height), background_color) | |
result.paste(pil_img, ((height - width) // 2, 0)) | |
return result | |
processed_images = [] | |
for img_data in image: | |
pad_image = expand2square(img_data, (0, 0, 0)) | |
image_temp = processor.preprocess(pad_image, return_tensors='pt')['pixel_values'][0] | |
processed_images.append(image_temp) | |
image = processed_images | |
else: | |
processed_images = [] | |
for img_data in image: | |
image_temp = processor.preprocess(img_data, return_tensors='pt')['pixel_values'][0] | |
processed_images.append(image_temp) | |
image = processed_images | |
sources = preprocess_multimodal( | |
copy.deepcopy([e["conversations"] for e in sources]), | |
self.data_args) | |
else: | |
sources = copy.deepcopy([e["conversations"] for e in sources]) | |
data_dict = preprocess( | |
sources, | |
self.tokenizer, | |
has_image=('image' in self.list_data_dict[i])) | |
if isinstance(i, int): | |
data_dict = dict(input_ids=data_dict["input_ids"][0], | |
labels=data_dict["labels"][0]) | |
# image exist in the data | |
if 'image' in self.list_data_dict[i]: | |
data_dict['image'] = image | |
elif self.data_args.is_multimodal: | |
# image does not exist in the data, but the model is multimodal | |
crop_size = self.data_args.image_processor.crop_size | |
data_dict['image'] = torch.zeros(3, crop_size['height'], crop_size['width']) | |
return data_dict | |
class DataCollatorForSupervisedDataset(object): | |
"""Collate examples for supervised fine-tuning.""" | |
tokenizer: transformers.PreTrainedTokenizer | |
def __call__(self, instances: Sequence[Dict]) -> Dict[str, torch.Tensor]: | |
input_ids, labels = tuple([instance[key] for instance in instances] | |
for key in ("input_ids", "labels")) | |
input_ids = torch.nn.utils.rnn.pad_sequence( | |
input_ids, | |
batch_first=True, | |
padding_value=self.tokenizer.pad_token_id) | |
labels = torch.nn.utils.rnn.pad_sequence(labels, | |
batch_first=True, | |
padding_value=IGNORE_INDEX) | |
input_ids = input_ids[:, :self.tokenizer.model_max_length] | |
labels = labels[:, :self.tokenizer.model_max_length] | |
batch = dict( | |
input_ids=input_ids, | |
labels=labels, | |
attention_mask=input_ids.ne(self.tokenizer.pad_token_id), | |
) | |
if 'image' in instances[0]: | |
if not all(len(instance['image']) == 2 for instance in instances): | |
raise ValueError("Each instance['image'] must contain exactly two type images.") | |
cur_images = [instance['image'][0] for instance in instances] | |
prior_images = [instance['image'][1] for instance in instances] | |
if all(x is not None and x.shape == cur_images[0].shape for x in cur_images) and \ | |
all(x is not None and x.shape == prior_images[0].shape for x in prior_images): | |
batch['images'] = torch.stack([torch.stack(cur_images), torch.stack(prior_images)]) | |
else: | |
print("Warning: Image shapes are inconsistent. Using lists for images.") | |
batch['images'] = [cur_images, prior_images] | |
return batch | |
def make_supervised_data_module(tokenizer: transformers.PreTrainedTokenizer, | |
data_args) -> Dict: | |
"""Make dataset and collator for supervised fine-tuning.""" | |
train_dataset = LazySupervisedDataset(tokenizer=tokenizer, | |
data_path=data_args.data_path, | |
data_args=data_args) | |
eval_dataset = LazySupervisedDataset(tokenizer=tokenizer, | |
data_path=data_args.validation_data_path, | |
data_args=data_args, | |
sample_rate=1.0) | |
data_collator = DataCollatorForSupervisedDataset(tokenizer=tokenizer) | |
return dict(train_dataset=train_dataset, | |
eval_dataset=eval_dataset, | |
data_collator=data_collator) | |
def train(): | |
global local_rank | |
parser = transformers.HfArgumentParser( | |
(ModelArguments, DataArguments, TrainingArguments)) | |
model_args, data_args, training_args = parser.parse_args_into_dataclasses() | |
local_rank = training_args.local_rank | |
compute_dtype = (torch.float16 if training_args.fp16 else (torch.bfloat16 if training_args.bf16 else torch.float32)) | |
bnb_model_from_pretrained_args = {} | |
if training_args.bits in [4, 8]: | |
from transformers import BitsAndBytesConfig | |
bnb_model_from_pretrained_args.update(dict( | |
device_map={"": training_args.device}, | |
load_in_4bit=training_args.bits == 4, | |
load_in_8bit=training_args.bits == 8, | |
quantization_config=BitsAndBytesConfig( | |
load_in_4bit=training_args.bits == 4, | |
load_in_8bit=training_args.bits == 8, | |
llm_int8_skip_modules=["mm_projector"], | |
llm_int8_threshold=6.0, | |
llm_int8_has_fp16_weight=False, | |
bnb_4bit_compute_dtype=compute_dtype, | |
bnb_4bit_use_double_quant=training_args.double_quant, | |
bnb_4bit_quant_type=training_args.quant_type # {'fp4', 'nf4'} | |
) | |
)) | |
if model_args.vision_tower is not None: | |
model = LibraLlamaForCausalLM.from_pretrained( | |
model_args.model_name_or_path, | |
cache_dir=training_args.cache_dir, | |
torch_dtype=(torch.bfloat16 if training_args.bf16 else None), | |
**bnb_model_from_pretrained_args | |
) | |
else: | |
model = transformers.LlamaForCausalLM.from_pretrained( | |
model_args.model_name_or_path, | |
cache_dir=training_args.cache_dir, | |
torch_dtype=(torch.bfloat16 if training_args.bf16 else None), | |
**bnb_model_from_pretrained_args | |
) | |
model.config.use_cache = False | |
if model_args.freeze_backbone: | |
model.model.requires_grad_(False) | |
if training_args.bits in [4, 8]: | |
from peft import prepare_model_for_kbit_training | |
model.config.torch_dtype=(torch.float32 if training_args.fp16 else (torch.bfloat16 if training_args.bf16 else torch.float32)) | |
model = prepare_model_for_kbit_training(model, use_gradient_checkpointing=training_args.gradient_checkpointing) | |
if training_args.gradient_checkpointing: | |
if hasattr(model, "enable_input_require_grads"): | |
model.enable_input_require_grads() | |
else: | |
def make_inputs_require_grad(module, input, output): | |
output.requires_grad_(True) | |
model.get_input_embeddings().register_forward_hook(make_inputs_require_grad) | |
if training_args.lora_enable: | |
from peft import LoraConfig, get_peft_model | |
lora_config = LoraConfig( | |
r=training_args.lora_r, | |
lora_alpha=training_args.lora_alpha, | |
target_modules=find_all_linear_names(model), | |
lora_dropout=training_args.lora_dropout, | |
bias=training_args.lora_bias, | |
task_type="CAUSAL_LM", | |
) | |
if training_args.bits == 16: | |
if training_args.bf16: | |
model.to(torch.bfloat16) | |
if training_args.fp16: | |
model.to(torch.float16) | |
rank0_print("Adding LoRA adapters...") | |
model = get_peft_model(model, lora_config) | |
if 'mpt' in model_args.model_name_or_path: | |
tokenizer = transformers.AutoTokenizer.from_pretrained( | |
model_args.model_name_or_path, | |
cache_dir=training_args.cache_dir, | |
model_max_length=training_args.model_max_length, | |
padding_side="right" | |
) | |
else: | |
tokenizer = transformers.AutoTokenizer.from_pretrained( | |
model_args.model_name_or_path, | |
cache_dir=training_args.cache_dir, | |
model_max_length=training_args.model_max_length, | |
padding_side="right", | |
use_fast=False, | |
) | |
if model_args.version == "v0": | |
if tokenizer.pad_token is None: | |
smart_tokenizer_and_embedding_resize( | |
special_tokens_dict=dict(pad_token="[PAD]"), | |
tokenizer=tokenizer, | |
model=model, | |
) | |
elif model_args.version == "v0.5": | |
tokenizer.pad_token = tokenizer.unk_token | |
else: | |
tokenizer.pad_token = tokenizer.unk_token | |
if model_args.version in conversation_lib.conv_templates: | |
conversation_lib.default_conversation = conversation_lib.conv_templates[model_args.version] | |
else: | |
conversation_lib.default_conversation = conversation_lib.conv_templates["vicuna_v1"] | |
if model_args.vision_tower is not None: | |
model.get_model().initialize_vision_modules( | |
model_args=model_args, | |
fsdp=training_args.fsdp | |
) | |
vision_tower = model.get_vision_tower() | |
vision_tower.to(dtype=torch.bfloat16 if training_args.bf16 else torch.float16, device=training_args.device) | |
data_args.image_processor = vision_tower.image_processor | |
data_args.is_multimodal = True | |
model.config.image_aspect_ratio = data_args.image_aspect_ratio | |
model.config.tokenizer_padding_side = tokenizer.padding_side | |
model.config.tokenizer_model_max_length = tokenizer.model_max_length | |
model.config.tune_mm_mlp_adapter = training_args.tune_mm_mlp_adapter = model_args.tune_mm_mlp_adapter | |
if model_args.tune_mm_mlp_adapter: | |
model.requires_grad_(False) | |
for p in model.get_model().mm_projector.parameters(): | |
p.requires_grad = True | |
model.config.freeze_mm_mlp_adapter = training_args.freeze_mm_mlp_adapter | |
if training_args.freeze_mm_mlp_adapter: | |
for p in model.get_model().mm_projector.parameters(): | |
p.requires_grad = False | |
if training_args.bits in [4, 8]: | |
model.get_model().mm_projector.to(dtype=compute_dtype, device=training_args.device) | |
model.config.mm_use_im_start_end = data_args.mm_use_im_start_end = model_args.mm_use_im_start_end | |
model.config.mm_projector_lr = training_args.mm_projector_lr | |
training_args.use_im_start_end = model_args.mm_use_im_start_end | |
model.config.mm_use_im_patch_token = model_args.mm_use_im_patch_token | |
model.initialize_vision_tokenizer(model_args, tokenizer=tokenizer) | |
if training_args.bits in [4, 8]: | |
from peft.tuners.lora import LoraLayer | |
for name, module in model.named_modules(): | |
if isinstance(module, LoraLayer): | |
if training_args.bf16: | |
module = module.to(torch.bfloat16) | |
if 'norm' in name: | |
module = module.to(torch.float32) | |
if 'lm_head' in name or 'embed_tokens' in name: | |
if hasattr(module, 'weight'): | |
if training_args.bf16 and module.weight.dtype == torch.float32: | |
module = module.to(torch.bfloat16) | |
data_module = make_supervised_data_module(tokenizer=tokenizer, | |
data_args=data_args) | |
# SaveCallback | |
class SaveCallback(TrainerCallback): | |
def __init__(self): | |
super().__init__() | |
self.best_metric = None | |
def on_evaluate(self, args, state, control, metrics, **kwargs): | |
""" | |
Custom logic for evaluating and saving the best model based on a chosen metric. | |
Saves the model and configuration if a better metric is achieved during evaluation. | |
""" | |
metric_for_best_model = 'eval_loss' # Metric used to determine the best model (e.g., eval_loss, eval_bleu, eval_rouge) | |
metric_value = metrics.get(metric_for_best_model) | |
if self.best_metric is None or metric_value < self.best_metric: | |
self.best_metric = metric_value | |
best_model_dir = os.path.join(args.output_dir, 'best_eval_model') | |
# Save generation configuration if present | |
if hasattr(model, 'generation_config'): | |
model.generation_config.save_pretrained(best_model_dir) | |
# Save model configuration | |
model.config.save_pretrained(best_model_dir) | |
if tokenizer is not None: | |
tokenizer.save_pretrained(best_model_dir) | |
# Save the best model | |
if args.lora_enable: | |
# Save LoRA-specific parameters | |
state_dict = get_peft_state_maybe_zero_3( | |
model.named_parameters(), args.lora_bias | |
) | |
non_lora_state_dict = get_peft_state_non_lora_maybe_zero_3( | |
model.named_parameters() | |
) | |
if args.local_rank in [-1, 0]: | |
model.save_pretrained(best_model_dir, state_dict=state_dict) | |
torch.save(non_lora_state_dict, os.path.join(best_model_dir, 'non_lora_trainables.bin')) | |
else: | |
# Save full model state when not using LoRA | |
state_dict = get_non_vision_tower_state_maybe_zero_3( | |
model.named_parameters() | |
) | |
if args.local_rank in [-1, 0]: | |
model.save_pretrained(best_model_dir, state_dict=state_dict) | |
# Save mm_projector state when tuning mm_mlp_adapter | |
safe_save_model_for_hf_trainer(trainer=trainer, output_dir=best_model_dir) | |
check_trainable_parameters(model) | |
compute_metrics_func = None | |
if model_args.compute_metrics: | |
compute_metrics_func = create_compute_metrics(tokenizer,vision_tower.num_patches,conversation_lib.default_conversation.sep2) | |
model.to(training_args.device) | |
trainer = LibraTrainer(model=model, | |
tokenizer=tokenizer, | |
args=training_args, | |
callbacks=[SaveCallback()], | |
compute_metrics=compute_metrics_func, | |
**data_module) | |
if list(pathlib.Path(training_args.output_dir).glob("checkpoint-*")): | |
trainer.train(resume_from_checkpoint=True) | |
else: | |
trainer.train() | |
trainer.save_state() | |
model.config.use_cache = True | |
if training_args.lora_enable: | |
state_dict = get_peft_state_maybe_zero_3( | |
model.named_parameters(), training_args.lora_bias | |
) | |
non_lora_state_dict = get_peft_state_non_lora_maybe_zero_3( | |
model.named_parameters() | |
) | |
if training_args.local_rank == 0 or training_args.local_rank == -1: | |
model.config.save_pretrained(training_args.output_dir) | |
model.save_pretrained(training_args.output_dir, state_dict=state_dict) | |
torch.save(non_lora_state_dict, os.path.join(training_args.output_dir, 'non_lora_trainables.bin')) | |
else: | |
safe_save_model_for_hf_trainer(trainer=trainer, | |
output_dir=training_args.output_dir) | |
if __name__ == "__main__": | |
train() |